BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00003119
         (1409 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ15015.1| hypothetical protein PRUPE_ppa005553mg [Prunus pe...   551   e-154
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ...   551   e-154
ref|XP_004232855.1| PREDICTED: general transcription factor IIH ...   550   e-154
ref|XP_006347058.1| PREDICTED: general transcription factor IIH ...   548   e-153
emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   547   e-153
ref|XP_006653885.1| PREDICTED: general transcription factor IIH ...   546   e-153
ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus commun...   546   e-153
gb|EOY28279.1| Transcription factor-related isoform 1 [Theobroma...   545   e-152
emb|CAE05735.1| OSJNBb0017I01.15 [Oryza sativa Japonica Group]        545   e-152
ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general tran...   541   e-151
ref|XP_006467817.1| PREDICTED: general transcription factor IIH ...   538   e-150
ref|XP_004505045.1| PREDICTED: general transcription factor IIH ...   537   e-150
ref|XP_002447335.1| hypothetical protein SORBIDRAFT_06g033130 [S...   537   e-150
gb|EEC78260.1| hypothetical protein OsI_17944 [Oryza sativa Indi...   537   e-150
tpg|DAA35322.1| TPA: hypothetical protein ZEAMMB73_386928 [Zea m...   536   e-150
ref|XP_006827784.1| hypothetical protein AMTR_s00009p00265760 [A...   536   e-150
ref|XP_003601071.1| General transcription factor IIH subunit [Me...   536   e-149
ref|XP_004972571.1| PREDICTED: general transcription factor IIH ...   535   e-149
gb|EOY28282.1| Transcription factor-related isoform 4 [Theobroma...   530   e-148
ref|XP_003637396.1| General transcription factor IIH subunit [Me...   529   e-147

>gb|EMJ15015.1| hypothetical protein PRUPE_ppa005553mg [Prunus persica]
          Length = 455

 Score =  551 bits (1420), Expect = e-154
 Identities = 282/430 (65%), Positives = 350/430 (81%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V+II++NFMDMVAALPA+KLD+LY++ FICEA+LRSLPP+AKKYVLQML I+ P+ A
Sbjct: 1    MPQVRIIAKNFMDMVAALPAMKLDKLYENAFICEAILRSLPPLAKKYVLQMLCIEVPVTA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            KS+E +V+PDG+SKH+VA++RL+QLR+F E  + +K++ +Y LNP FQ  L+K++  G  
Sbjct: 61   KSMEEWVLPDGVSKHRVAIDRLIQLRIFTETVD-RKRETTYTLNPIFQTNLKKLLLYGVV 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREPMP +   RLP+ E+L ++A+ QWE FLLQL+NS+  E  S   SSSM++I QR G
Sbjct: 120  LPREPMPSNVTVRLPSSEDLEAFALGQWECFLLQLINSSQIERPSN-ISSSMMKIFQR-G 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLS R  E+ RLTESGFQF+LMDT++QLW IIREYIS +E+RGVDSA+LI FLLELSFHV
Sbjct: 178  LLSQRDKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDSADLISFLLELSFHV 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
            TG+AYNINTL++ +   I++LA LGLVKLQQG K+ WFIPT LATNL+ SL DSSSRK  
Sbjct: 238  TGEAYNINTLTEVQKNTIKDLADLGLVKLQQGRKDSWFIPTRLATNLSVSLTDSSSRK-- 295

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            +GFVVVETNFR+YAYSTSKLH  ILRLF+R+EYQLPNL VGAITKESLY AF NG+TA+Q
Sbjct: 296  QGFVVVETNFRLYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYSAFENGITADQ 355

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            +ISFLQQ+AHPRVA+R+PSVPENVTDQIRLWE+D NRV+MTP+Y Y+ F           
Sbjct: 356  IISFLQQNAHPRVAERVPSVPENVTDQIRLWETDLNRVEMTPAYHYDGFPSRDLFEGASD 415

Query: 32   XAIDIGGLLW 3
             A     LLW
Sbjct: 416  FARGYNALLW 425


>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
            sativus]
          Length = 451

 Score =  551 bits (1420), Expect = e-154
 Identities = 284/430 (66%), Positives = 352/430 (81%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+VKII++NFMDMVA+LPA+KLDQLY++ FICEA+LRSLPP+AKK+VLQMLYID P++A
Sbjct: 1    MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            KS+E +V+PDG+SK+KVAV+RL+QLRVFIE ++ +K++ +Y LNP FQ  L+K++  G  
Sbjct: 61   KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-RKRETTYRLNPTFQANLQKLLIHGEV 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
              REPMP +   RLP+ E+L +YA+ QWE FLLQL+NS   E  S   SSS++++ Q+ G
Sbjct: 120  LAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSN-ISSSVMKVFQK-G 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLS R  E+ RLTESGFQF+LM+T++QLW IIREYIS AE+RGVD A+LI FLLELSFHV
Sbjct: 178  LLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHV 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
            TG+AY+I+TLS  +  AI++LA LGLVKLQQG KE WFIPT LATNL+ SL DSSSRK  
Sbjct: 238  TGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKL- 296

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
             GFVVVETNFR+YAYSTSKLH  ILRLF+R+EYQLPNL VGAITKESLY AF NG+TAEQ
Sbjct: 297  -GFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 355

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            +++FLQQ+AHPRVA+RIPSVPENVTDQIRLWESD NRV +TP++ Y++F           
Sbjct: 356  IVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 415

Query: 32   XAIDIGGLLW 3
             A +  GLLW
Sbjct: 416  YAREWNGLLW 425


>ref|XP_004232855.1| PREDICTED: general transcription factor IIH subunit 4-like [Solanum
            lycopersicum]
          Length = 453

 Score =  550 bits (1416), Expect = e-154
 Identities = 283/431 (65%), Positives = 348/431 (80%), Gaps = 1/431 (0%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+VKI++RNFMDMVA+LP +KLD LYD+ FICEA+LRSLPP+AKKYVLQMLYID PI A
Sbjct: 1    MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            KS+E +V+PDG SKHKVA++RL+QLRV  E  + +KK+  Y LNPKFQ  L+K I  GG 
Sbjct: 61   KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFD-RKKEAMYQLNPKFQFNLQKHIVYGGV 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREPMP +   RLP+ EEL +YA++QWE FLL L++S+    T+   SSSM++I QR G
Sbjct: 120  LPREPMPSNITVRLPSLEELEAYAVEQWECFLLNLISSSEAGKTTN-ISSSMMKIFQR-G 177

Query: 752  LLSSRQN-ESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFH 576
            LLS R + E  RLTESGFQF+LMDT++QLW IIREYI+ AE+RGVDSA+LI FLLELSFH
Sbjct: 178  LLSQRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFH 237

Query: 575  VTGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKT 396
            VTG+AYN NT++  +   I++L+ LGLVKLQQG KE WFIPT LATNL+ SL D+++RK 
Sbjct: 238  VTGKAYNTNTITDLQRSIIKDLSDLGLVKLQQGRKESWFIPTKLATNLSISLADTTTRK- 296

Query: 395  SEGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAE 216
             +GF+V+ETNFR+YAYSTSKLH  ILRLF R+EYQLPNL VGAI KESLY+AF NG+T+E
Sbjct: 297  -QGFIVIETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIVGAINKESLYKAFQNGITSE 355

Query: 215  QVISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXX 36
            Q++SFLQQ+AHPRVA+RIPSVPENVTDQIRLWESD NRV+MTP++ Y++F          
Sbjct: 356  QIVSFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVEMTPAHFYDEFPSKDVFEAAC 415

Query: 35   XXAIDIGGLLW 3
              A + GGLLW
Sbjct: 416  DFAREYGGLLW 426


>ref|XP_006347058.1| PREDICTED: general transcription factor IIH subunit 4-like [Solanum
            tuberosum]
          Length = 453

 Score =  548 bits (1413), Expect = e-153
 Identities = 282/431 (65%), Positives = 348/431 (80%), Gaps = 1/431 (0%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+VKI++RNFMDMVA+LP +KLD LYD+ FICEA+LRSLPP+AKKYVLQMLYID PI A
Sbjct: 1    MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            KS+E +V+PDG SKHKVA++RL+QLRV  E  + +KK+ +Y LNPKFQ  L+K I  GG 
Sbjct: 61   KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFD-RKKEATYQLNPKFQFNLQKHIVHGGI 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREPMP +   RLP+ EEL +YA++QWE FLL L++S+    T+   SSSM++I QR G
Sbjct: 120  LPREPMPSNITVRLPSLEELEAYAVEQWECFLLNLISSSEGGKTTN-ISSSMMKIFQR-G 177

Query: 752  LLSSRQN-ESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFH 576
            LLS R + E  RLTESGFQF+LMDT++QLW IIREYI+ AE+RGVDSA+LI FLLELSFH
Sbjct: 178  LLSQRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFH 237

Query: 575  VTGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKT 396
            VTG+AYN NT++  +   I++L+ LGLVKLQQG KE WFIPT LATNL+ SL D++SRK 
Sbjct: 238  VTGKAYNTNTITDLQRSIIKDLSDLGLVKLQQGRKESWFIPTKLATNLSISLADTTSRK- 296

Query: 395  SEGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAE 216
             +GF+V+ETNFR+YAYSTSKLH  ILRLF R+EYQLPNL VGAI KESLY+AF NG+T++
Sbjct: 297  -QGFIVIETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIVGAINKESLYKAFQNGITSD 355

Query: 215  QVISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXX 36
            Q++SFLQQ+AHPRVA+RIPSVPENVTDQIRLWESD NRV+M P++ Y++F          
Sbjct: 356  QIVSFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVEMEPAHFYDEFPSKDVFEAAC 415

Query: 35   XXAIDIGGLLW 3
              A + GGLLW
Sbjct: 416  DFAREYGGLLW 426


>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  547 bits (1410), Expect = e-153
 Identities = 278/430 (64%), Positives = 349/430 (81%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+VKII++NFMDMVA+LPA+KLD LY + FICEA+LRSLPP+AKKY+LQMLYID P+ A
Sbjct: 1    MPQVKIIAKNFMDMVASLPAMKLDALYHNTFICEAILRSLPPLAKKYILQMLYIDVPVTA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            K++E +V+ DG SKH+VA++RL+QLRVF E S+ +KK+ SY LNP FQ  L+K +  GG 
Sbjct: 61   KAMEEWVLADGFSKHRVAIDRLIQLRVFTETSD-RKKETSYRLNPTFQTNLQKHLIYGGV 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREPMP +   RLP+ ++L +YA+ QWE FLLQL++S   E  +  FSSS++++ QR G
Sbjct: 120  LPREPMPSNITVRLPSLDDLEAYALGQWECFLLQLISSTQTEKLTN-FSSSLMKVFQR-G 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LL+ R+ E+ RLTESGFQF+LMDT++QLW I+REYIS +E+RGVD A+LI FLLELSFHV
Sbjct: 178  LLTQREKEAPRLTESGFQFLLMDTNAQLWYIMREYISNSEERGVDPADLISFLLELSFHV 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
            TG+AYNINTL++ +   I++L  LGLVKLQQG KE WFIPT LATNL+ SL D+SSRK  
Sbjct: 238  TGEAYNINTLTEFQRNTIKDLVDLGLVKLQQGRKESWFIPTKLATNLSMSLSDTSSRK-- 295

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            +GFVVVETNFR+YAYS+SKLH  ILRLF+R+EYQLPNL VGAITKESLY AF NG+TAEQ
Sbjct: 296  QGFVVVETNFRLYAYSSSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNAFENGITAEQ 355

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            +ISFLQQ+AHPRVA+R P+VPENVTDQIRLWE+D NRV+  PS++Y++F           
Sbjct: 356  IISFLQQNAHPRVAERTPAVPENVTDQIRLWETDLNRVETMPSHLYDEFPSRDVFEAACD 415

Query: 32   XAIDIGGLLW 3
             A + GGLLW
Sbjct: 416  FAREYGGLLW 425


>ref|XP_006653885.1| PREDICTED: general transcription factor IIH subunit 4-like [Oryza
            brachyantha]
          Length = 451

 Score =  546 bits (1408), Expect = e-153
 Identities = 281/430 (65%), Positives = 347/430 (80%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V +++RNFMDMVAALPA KLD LYDS FICEAVLRSLPP+AKKY LQMLY+ +P+AA
Sbjct: 1    MPQVMVVARNFMDMVAALPAAKLDMLYDSAFICEAVLRSLPPLAKKYALQMLYVSAPVAA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
             ++E +V+ +  +KHKVA++RL+QLRVF+EV + ++K+VSY +N KFQ  ++K +  GG+
Sbjct: 61   AAMEEWVLDEYAAKHKVAIDRLLQLRVFVEVRD-RRKEVSYKMNQKFQGNMQKYLVDGGS 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREP+P S  ARLPT  EL +YA++QWE FLLQL+NS+  E     FSSSM+R  QR G
Sbjct: 120  LPREPIPSSVTARLPTLAELEAYALEQWECFLLQLINSSQVE-RGTSFSSSMMRTFQR-G 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLSSR  E+ RLTE+GFQF+LM+T++QLW I+REYIS++E+RGVD  ELI FLLELSFH 
Sbjct: 178  LLSSRDGEAPRLTENGFQFLLMETNAQLWYIMREYISSSEERGVDPTELISFLLELSFHT 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
             G+AY++NTL+  +  AI +LA LGLVKLQQG K+ WFIPT LATNL+ASL DSSS K  
Sbjct: 238  LGEAYSLNTLTDVQRNAIRDLAELGLVKLQQGRKDSWFIPTKLATNLSASLSDSSSSK-- 295

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            EGFVVVETNFR+YAYSTSKLH  ILRLF+R+EYQLPNL VG+ITKESLY AF NG+TAEQ
Sbjct: 296  EGFVVVETNFRMYAYSTSKLHCEILRLFSRVEYQLPNLIVGSITKESLYGAFENGITAEQ 355

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            +ISFLQQ+AHPRVA +IP+VPENVTDQIRLWE+D+NRV+MT S++Y DF           
Sbjct: 356  IISFLQQNAHPRVADKIPAVPENVTDQIRLWETDRNRVEMTLSHLYEDFPSKDMFEQCCD 415

Query: 32   XAIDIGGLLW 3
             A D G LLW
Sbjct: 416  YARDHGCLLW 425


>ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus communis]
            gi|223541708|gb|EEF43256.1| tfiih, polypeptide, putative
            [Ricinus communis]
          Length = 451

 Score =  546 bits (1408), Expect = e-153
 Identities = 279/430 (64%), Positives = 349/430 (81%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V+II++NFMDMVA+LPA+KLD+LY + FIC+A+LRSLPP+AKKYV+Q+LYID P+A 
Sbjct: 1    MPQVRIIAKNFMDMVASLPAMKLDKLYTNPFICQAILRSLPPLAKKYVVQILYIDGPVAD 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            K+LE +++PDG SKH+VA++RL QLR+F E+ + +KK++SY LNP FQ  L+K +  GG 
Sbjct: 61   KTLEEWLLPDGSSKHRVAIDRLTQLRIFTEIVD-RKKEISYKLNPTFQTNLQKHLIDGGV 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             P EP+  +   RLPT EEL +YA+ QWE FLL L+NS   E  S  FSSSM++I QR G
Sbjct: 120  LPGEPLASNIAVRLPTLEELDTYALGQWECFLLHLINSGHAE-RSTNFSSSMMKIFQR-G 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LL+ R  E+ RLTESGFQF+LMDT++QLW IIREYIS +E+RG+DSA+LI FLLELSFH+
Sbjct: 178  LLTQRDKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEERGLDSADLISFLLELSFHI 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
            TG+AYN+  L++ +   I++LA LGLVKLQQG KE WFIPT LATNL+ SL DSSSRK  
Sbjct: 238  TGEAYNMIMLTEFQRNMIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLTDSSSRK-- 295

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            +GFVVVETNFR+YAYSTSKLH  I+RLF+R+EYQLPNL VGA+TKESLY AF NG+TAEQ
Sbjct: 296  QGFVVVETNFRMYAYSTSKLHCEIMRLFSRVEYQLPNLVVGAMTKESLYSAFENGITAEQ 355

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            +ISFLQQ+AHPRVA+RIPSVPENVTDQIRLWESD NRV+MTP+++Y++F           
Sbjct: 356  IISFLQQNAHPRVAERIPSVPENVTDQIRLWESDMNRVEMTPAHLYDEFPSRDVFEAACN 415

Query: 32   XAIDIGGLLW 3
             A D  GLLW
Sbjct: 416  FARDWNGLLW 425


>gb|EOY28279.1| Transcription factor-related isoform 1 [Theobroma cacao]
          Length = 451

 Score =  545 bits (1404), Expect = e-152
 Identities = 278/409 (67%), Positives = 341/409 (83%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+VKII++NFMDMVA+LPA+KLD LY + FICEA+LRS+PP+AKKYVLQMLYID P+ A
Sbjct: 1    MPQVKIIAKNFMDMVASLPAIKLDMLYRNQFICEAILRSMPPLAKKYVLQMLYIDVPVTA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            KSLE +V+ DG SKHKVA++RL+QLR+ +EV + +KK+ SY LNP FQ  LRK +  GG 
Sbjct: 61   KSLEEWVLADGSSKHKVAIDRLIQLRI-LEVID-RKKETSYKLNPTFQTNLRKHLIYGGI 118

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREPMP +   RLPT EEL +YA +QWE FLLQL++S   E  +  FSSSM+RI QR G
Sbjct: 119  LPREPMPSNVTVRLPTSEELDAYAHEQWECFLLQLISSGQAEKPTN-FSSSMMRIFQR-G 176

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LL  R+ E+ RLTESGFQF+LMDT++QLW IIREYIS +E++GVD A+LI FLLELSFH 
Sbjct: 177  LLCQREKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEEQGVDQADLIAFLLELSFHT 236

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
            TG+AYN+NTL+  +   I++L+ LGLVKLQQG K+ WFIPT LATNL+ SL DSSSRK  
Sbjct: 237  TGEAYNMNTLTDDQRAMIKDLSDLGLVKLQQGRKDSWFIPTKLATNLSVSLTDSSSRK-- 294

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            +GFVVVETNFR+YAYS+SKLH  ILRLF+R+EYQLPNL VGAITKESLY AF NG+ AEQ
Sbjct: 295  QGFVVVETNFRMYAYSSSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNAFENGIAAEQ 354

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDF 66
            +I+FLQQ+AHPRVA+++PSVPENVTDQIRLWE+D NRV+MTP++ Y+DF
Sbjct: 355  IITFLQQNAHPRVAEKLPSVPENVTDQIRLWETDLNRVEMTPAHFYDDF 403


>emb|CAE05735.1| OSJNBb0017I01.15 [Oryza sativa Japonica Group]
          Length = 451

 Score =  545 bits (1403), Expect = e-152
 Identities = 280/430 (65%), Positives = 346/430 (80%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V +++RNFMDMVAALPA KLD LYDS FICEAVLRSLPP+AKKY LQMLY+ +P+AA
Sbjct: 1    MPQVMVVARNFMDMVAALPAAKLDMLYDSAFICEAVLRSLPPLAKKYALQMLYVSAPVAA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
             ++E +V+ +  +KH+VA++RL+QLRVF+EV + ++K+VSY +N KFQ  ++K +  GG+
Sbjct: 61   AAMEEWVLDEYAAKHRVAIDRLLQLRVFVEVRD-RRKEVSYKMNQKFQGNMQKYLVDGGS 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREP+P S  ARLPT  EL S+A++QWE FLLQL+NS+  E     FSSSM+R  QR G
Sbjct: 120  LPREPIPSSVTARLPTLAELESFALEQWECFLLQLINSSQVE-RGTSFSSSMMRTFQR-G 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLSSR  E+ RLTE+GFQF+LM+T++QLW I+REYIS+AE+RGVD  ELI FLLELSFH 
Sbjct: 178  LLSSRDGEAPRLTENGFQFLLMETNAQLWYIMREYISSAEERGVDPTELISFLLELSFHT 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
             G+AY++NTL+  +  AI +LA LGLVKLQQG K+ WFIPT LATNL+ASL DSSS K  
Sbjct: 238  LGEAYSLNTLTDVQRNAIRDLAELGLVKLQQGRKDSWFIPTKLATNLSASLSDSSSNK-- 295

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            EGFVVVETNFR+YAYSTS+LH  ILRLF+R+EYQLPNL VG+ITKESLY AF NG+TAEQ
Sbjct: 296  EGFVVVETNFRMYAYSTSRLHCEILRLFSRVEYQLPNLIVGSITKESLYGAFENGITAEQ 355

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            +ISFLQQ+AHPRVA +IP+VPENVTDQIRLWE+D+NRV MT S++Y DF           
Sbjct: 356  IISFLQQNAHPRVADKIPAVPENVTDQIRLWETDRNRVDMTLSHLYEDFPSKDMFDQCCD 415

Query: 32   XAIDIGGLLW 3
             A D G LLW
Sbjct: 416  YARDHGCLLW 425


>ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIH
            subunit 4-like [Fragaria vesca subsp. vesca]
          Length = 453

 Score =  541 bits (1393), Expect = e-151
 Identities = 277/430 (64%), Positives = 346/430 (80%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V+II++NFMDMVAALPA+KLD+LYD+ FICEA+LRSLPP+AKKYVLQML ++ P+ +
Sbjct: 1    MPEVRIIAKNFMDMVAALPAMKLDKLYDNSFICEAILRSLPPLAKKYVLQMLCVEFPVNS 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            KS+E +V+PDG SKH+VAV+RL+QLR+F E    KK DV+Y LNP FQ  L K++  G  
Sbjct: 61   KSMEEWVLPDGASKHRVAVDRLVQLRIFTETR--KKGDVTYTLNPIFQTNLNKLLVYGVV 118

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREPMP +   RLP+ EEL ++A++QWE FLLQL+NS+  +  S   SSSM++  QR G
Sbjct: 119  LPREPMPSNVTVRLPSSEELEAFALEQWECFLLQLINSSQTDRPSN-ISSSMMKTFQR-G 176

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            L++ R  E+ RLTESGFQF+LMDT++QLW IIREYI+++E+RG+DSA+LI FLLELSFHV
Sbjct: 177  LVTQRDREAPRLTESGFQFLLMDTNAQLWYIIREYITSSEERGIDSADLIAFLLELSFHV 236

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
            TG+AYNINTL++ +   I++   LGLVKLQQG KE WFIPT LATNL+ SL D+SSRK  
Sbjct: 237  TGEAYNINTLTELQKNTIKDFTDLGLVKLQQGRKESWFIPTKLATNLSVSLTDTSSRK-- 294

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            +GFVVVETNFR+YAYS+SKLH  ILRLF R+EYQLPNL VGAITKESLY AF N +TAEQ
Sbjct: 295  QGFVVVETNFRLYAYSSSKLHCEILRLFARVEYQLPNLIVGAITKESLYGAFDNCITAEQ 354

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            +ISFL+Q+AHPRVA+RIPSVPENVTDQIRLWE+D NRV+MT +Y+Y++F           
Sbjct: 355  IISFLKQNAHPRVAERIPSVPENVTDQIRLWETDLNRVEMTNAYIYDEFPSRDLFDGAVD 414

Query: 32   XAIDIGGLLW 3
             A    GLLW
Sbjct: 415  YARSYNGLLW 424


>ref|XP_006467817.1| PREDICTED: general transcription factor IIH subunit 4-like [Citrus
            sinensis]
          Length = 450

 Score =  538 bits (1387), Expect = e-150
 Identities = 278/430 (64%), Positives = 342/430 (79%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP VKII++NFMDMVA+L A  LD+LY++ FICEA+LRSLPP+AKKYV+QM YID  I A
Sbjct: 1    MPLVKIIAKNFMDMVASLTARDLDRLYENPFICEAILRSLPPLAKKYVMQMFYIDGAIPA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            K +E +V+PDG +KH+VA++RL+QLR+F   SE KKK+ +Y LN  FQ+ LRK +  GGA
Sbjct: 61   KMMEEWVLPDGFTKHRVAIDRLVQLRLF---SEEKKKETTYRLNSTFQSNLRKHLIYGGA 117

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREPMP    ARLPT E+L +YA+ QWE FLLQL++S   E  +  FSSSM+++ QR G
Sbjct: 118  LPREPMPSGITARLPTLEDLEAYAIGQWECFLLQLISSTQAERPTN-FSSSMMKVFQR-G 175

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLS R  E+ RLTESGFQF+LMDT++QLW I+REYIS +++RG++ A+LI FLLELSFHV
Sbjct: 176  LLSRRDKEAPRLTESGFQFLLMDTNAQLWYIVREYISNSQERGINQADLISFLLELSFHV 235

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
             G+AYN+NTLS+ +   I++ A LGLVKLQQG KE WFIPT LATNL+ SL DSS+RK  
Sbjct: 236  AGEAYNLNTLSEIQKSMIKDFADLGLVKLQQGRKENWFIPTKLATNLSMSLTDSSARK-- 293

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            EGF+VVETNFR+YAYSTSKLH  ILRLF+++EYQLPNL VGAITKESLY AF NG+TAEQ
Sbjct: 294  EGFIVVETNFRMYAYSTSKLHCEILRLFSKVEYQLPNLIVGAITKESLYNAFENGITAEQ 353

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            +ISFLQQ+AHPRVA R+PSVPENV DQIRLWESD NRV+MTP++ Y++F           
Sbjct: 354  IISFLQQNAHPRVADRMPSVPENVCDQIRLWESDLNRVEMTPAHYYDEFPSRDVFEAACD 413

Query: 32   XAIDIGGLLW 3
             A D  GLLW
Sbjct: 414  YARDQSGLLW 423


>ref|XP_004505045.1| PREDICTED: general transcription factor IIH subunit 4-like [Cicer
            arietinum]
          Length = 451

 Score =  537 bits (1384), Expect = e-150
 Identities = 274/430 (63%), Positives = 346/430 (80%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V+II++NFMDMVA++PA+KLD+LY + FICEA+LRSLPP+AKKYVLQ+L+ID P++A
Sbjct: 1    MPEVRIIAKNFMDMVASMPAIKLDKLYQNGFICEAILRSLPPLAKKYVLQLLHIDGPVSA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            K LE +V+PDGLSKHKVA++RL+QLRVF+E  + +K + +Y +N  +Q  L+K++  GG 
Sbjct: 61   KLLEEWVLPDGLSKHKVAIDRLVQLRVFVEALD-RKNEKTYKVNSTYQRSLQKLLVHGGT 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PRE MP +   RLPT E+L +YA++QWE FLLQL++ +  E T    SSS++++ QR  
Sbjct: 120  LPRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVEKTLN-ISSSLMKVFQRR- 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLS R  E+ +LTESGFQF+LMDT++QLW IIREYIS +E+RGVD+ +LI F+LELSFHV
Sbjct: 178  LLSQRDKEAPKLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDAGDLISFMLELSFHV 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
             G+AYNINTL+  +   I++LA LGLVKLQQG KE WFIPT LATNL+ SL +SSSRK  
Sbjct: 238  IGEAYNINTLTDFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSVSLTESSSRK-- 295

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            EGFVVVETNFRVYAYSTSKLH  ILRLF+R+EYQLPNL VGAITKESLY A  NG+TAEQ
Sbjct: 296  EGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNALENGITAEQ 355

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            ++SFL+Q+AHPRVAQRIP+VPENVTDQIRLWESD NRV+MT +Y Y++F           
Sbjct: 356  IVSFLRQNAHPRVAQRIPAVPENVTDQIRLWESDLNRVEMTEAYYYDEFPSRDVFEGACD 415

Query: 32   XAIDIGGLLW 3
             A +  GLLW
Sbjct: 416  CAREWNGLLW 425


>ref|XP_002447335.1| hypothetical protein SORBIDRAFT_06g033130 [Sorghum bicolor]
            gi|241938518|gb|EES11663.1| hypothetical protein
            SORBIDRAFT_06g033130 [Sorghum bicolor]
          Length = 451

 Score =  537 bits (1384), Expect = e-150
 Identities = 275/430 (63%), Positives = 344/430 (80%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V +++RNFMDMVAALPA KLD LYDS FICEAVLRSLPP+AKKY LQMLY+ +P+ A
Sbjct: 1    MPQVMVVARNFMDMVAALPAGKLDMLYDSAFICEAVLRSLPPLAKKYALQMLYVLAPVTA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
             ++E +V+ +  +KHKVA+++L+QLRVF+EV + +++DVSY +N KFQ  ++K +  GG+
Sbjct: 61   AAMEEWVLNEYAAKHKVAIDKLLQLRVFVEVRD-RRRDVSYKMNQKFQGNMQKYLVDGGS 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREP+PLS   RLPT  +L +YA+ QWE FLLQL+NS+  E     FSSSM++  QR G
Sbjct: 120  LPREPLPLSVTGRLPTPADLEAYALDQWECFLLQLINSSQVE-KGTSFSSSMMKTFQR-G 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLSSR  E+S+LTE+GFQF+LM+T++QLW I+REYIS+AE+RGVD  ELI FLLELSFH 
Sbjct: 178  LLSSRDGEASKLTENGFQFLLMETNAQLWYIMREYISSAEERGVDPTELISFLLELSFHK 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
             G AY++NTL+  +  AI +LA LGLVK QQG  +RWFIPT LATNL+ASL DSSS K  
Sbjct: 238  LGAAYSLNTLTDVQRIAIRDLAELGLVKQQQGRTDRWFIPTQLATNLSASLSDSSSNK-- 295

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            EGFVVVETNFR+YAYSTSKLH  ILRLF+R+EYQLPNL VGA+TKES+Y AF NG+TAEQ
Sbjct: 296  EGFVVVETNFRMYAYSTSKLHCEILRLFSRVEYQLPNLIVGAVTKESIYGAFENGITAEQ 355

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            +ISFL+Q+AHPRVA +IP+VPENVTDQIRLWE+D+NRV+M PS++Y DF           
Sbjct: 356  IISFLRQNAHPRVADKIPTVPENVTDQIRLWETDRNRVEMIPSHLYEDFPSKEWFEQCCD 415

Query: 32   XAIDIGGLLW 3
             A D G LLW
Sbjct: 416  YARDNGYLLW 425


>gb|EEC78260.1| hypothetical protein OsI_17944 [Oryza sativa Indica Group]
          Length = 459

 Score =  537 bits (1384), Expect = e-150
 Identities = 280/438 (63%), Positives = 346/438 (78%), Gaps = 8/438 (1%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V +++RNFMDMVAALPA KLD LYDS FICEAVLRSLPP+AKKY LQMLY+ +P+AA
Sbjct: 1    MPQVMVVARNFMDMVAALPAAKLDMLYDSAFICEAVLRSLPPLAKKYALQMLYVSAPVAA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
             ++E +V+ +  +KH+VA++RL+QLRVF+EV + ++K+VSY +N KFQ  ++K +  GG+
Sbjct: 61   AAMEEWVLDEYAAKHRVAIDRLLQLRVFVEVRD-RRKEVSYKMNQKFQGNMQKYLVDGGS 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREP+P S  ARLPT  EL S+A++QWE FLLQL+NS+  E     FSSSM+R  QR G
Sbjct: 120  LPREPIPSSVTARLPTLAELESFALEQWECFLLQLINSSQVE-RGTSFSSSMMRTFQR-G 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLSSR  E+ RLTE+GFQF+LM+T++QLW I+REYIS+AE+RGVD  ELI FLLELSFH 
Sbjct: 178  LLSSRDGEAPRLTENGFQFLLMETNAQLWYIMREYISSAEERGVDPTELISFLLELSFHT 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQ--------GTKERWFIPTNLATNLAASLC 417
             G+AY++NTL+  +  AI +LA LGLVKLQQ        G K+ WFIPT LATNL+ASL 
Sbjct: 238  LGEAYSLNTLTDVQRNAIRDLAELGLVKLQQMSRVKPWQGRKDSWFIPTKLATNLSASLS 297

Query: 416  DSSSRKTSEGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAF 237
            DSSS K  EGFVVVETNFR+YAYSTS+LH  ILRLF+R+EYQLPNL VG+ITKESLY AF
Sbjct: 298  DSSSNK--EGFVVVETNFRMYAYSTSRLHCEILRLFSRVEYQLPNLIVGSITKESLYGAF 355

Query: 236  SNGVTAEQVISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXX 57
             NG+TAEQ+ISFLQQ+AHPRVA +IP+VPENVTDQIRLWE+D+NRV MT S++Y DF   
Sbjct: 356  ENGITAEQIISFLQQNAHPRVADKIPAVPENVTDQIRLWETDRNRVDMTLSHLYEDFPSK 415

Query: 56   XXXXXXXXXAIDIGGLLW 3
                     A D G LLW
Sbjct: 416  DMFDQCCDYARDHGCLLW 433


>tpg|DAA35322.1| TPA: hypothetical protein ZEAMMB73_386928 [Zea mays]
          Length = 451

 Score =  536 bits (1382), Expect = e-150
 Identities = 276/430 (64%), Positives = 343/430 (79%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V +++RNFMDMVAALPA KLD LYDS FICEAVLRSLPP+AKKY LQMLY+ +P+ A
Sbjct: 1    MPQVMVVARNFMDMVAALPAGKLDMLYDSAFICEAVLRSLPPLAKKYALQMLYVLAPVTA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
             ++E +V+ +  +KHKVA+++L+QLRVF+EV + +++DVSY +N KFQ  ++K +  GG+
Sbjct: 61   AAMEEWVLDEYAAKHKVAIDKLLQLRVFVEVRD-RRRDVSYKMNQKFQGNMQKYLVDGGS 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREP+PLS   RLPT  +L +YA+ QWE FLLQL+NS+  E  S  FSSSM++  QR G
Sbjct: 120  LPREPLPLSVTGRLPTPADLEAYALDQWECFLLQLINSSQVEKGSS-FSSSMMKTFQR-G 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLSSR  E+S+LTE+GFQF+LM+T++QLW I+REYIS+AE+RGVD  ELI FLLELSFH 
Sbjct: 178  LLSSRDGEASKLTENGFQFLLMETNAQLWYIMREYISSAEERGVDPTELISFLLELSFHK 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
             G AY++NTL+  +  AI +LA LGLVK QQG K+ WFIPT LATNL+ASL DSSS K  
Sbjct: 238  LGAAYSLNTLTDVQRIAIRDLAELGLVKQQQGRKDSWFIPTQLATNLSASLSDSSSNK-- 295

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            EGFVVVETNFR+YAYSTSKLH  ILRLF R+EYQLPNL VGA+TKES+Y AF NG+TAEQ
Sbjct: 296  EGFVVVETNFRMYAYSTSKLHCEILRLFARVEYQLPNLIVGAVTKESIYGAFENGITAEQ 355

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            +ISFL+Q+AHPRVA +IP+VPENVTDQIRLWE+D NRV+M PS++Y DF           
Sbjct: 356  IISFLRQNAHPRVADKIPAVPENVTDQIRLWETDLNRVEMIPSHLYEDFPSKEWFEQCCD 415

Query: 32   XAIDIGGLLW 3
             A D G LLW
Sbjct: 416  YARDNGYLLW 425


>ref|XP_006827784.1| hypothetical protein AMTR_s00009p00265760 [Amborella trichopoda]
            gi|548832404|gb|ERM95200.1| hypothetical protein
            AMTR_s00009p00265760 [Amborella trichopoda]
          Length = 469

 Score =  536 bits (1381), Expect = e-150
 Identities = 279/448 (62%), Positives = 345/448 (77%), Gaps = 18/448 (4%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+VKI+ +NFMDMVAALPA KLD LY + F CEAVLRSLPPV+K YVL+MLYID+ ++A
Sbjct: 1    MPQVKIVPKNFMDMVAALPASKLDSLYTNTFFCEAVLRSLPPVSKMYVLRMLYIDAAVSA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            K ++ +V+PD  SKHK A++RL+QLRVF E S  +K+++SY LNPK+Q  LRK +  GG 
Sbjct: 61   KLMQEWVLPDSFSKHKAAIDRLLQLRVFTE-SIDRKREISYRLNPKYQENLRKYLVHGGT 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWEN------------------FLLQLVNSAFDE 807
              REPMP S   RLPT EEL +YA++QWE                   FLLQL+NS+  E
Sbjct: 120  LSREPMPSSVTVRLPTLEELDAYALQQWEVALSAPFVCLYFAGNLEKCFLLQLINSSLVE 179

Query: 806  ITSEPFSSSMLRICQRAGLLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDR 627
              +  FS SM+++ QR GL+++R NE+ +LTE+GF+F+LM+T +QLW I+REYIST+E R
Sbjct: 180  RPTN-FSPSMMKVFQR-GLITTRDNEAPKLTENGFRFLLMETHTQLWYIMREYISTSEGR 237

Query: 626  GVDSAELICFLLELSFHVTGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTN 447
            G+D+AELI FLLELSFHVTG+AYN+NTL++ +  AI++LATLGLVKLQQG KE WFIPT 
Sbjct: 238  GMDTAELISFLLELSFHVTGEAYNMNTLTEVQQIAIKDLATLGLVKLQQGRKESWFIPTK 297

Query: 446  LATNLAASLCDSSSRKTSEGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGA 267
            LATNL+ SL DSSSRK  EGFVVVETNFR+YAYSTSKLH  ILRLF R+EYQLPNL VGA
Sbjct: 298  LATNLSVSLSDSSSRK--EGFVVVETNFRLYAYSTSKLHCEILRLFCRIEYQLPNLIVGA 355

Query: 266  ITKESLYRAFSNGVTAEQVISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTP 87
            ITKESLY AF NG+T+EQ+I FLQQHAHPRVAQ+ P+VPENVTDQIRLWE+D NRV+M  
Sbjct: 356  ITKESLYTAFDNGITSEQIILFLQQHAHPRVAQKAPAVPENVTDQIRLWETDLNRVEMNL 415

Query: 86   SYMYNDFXXXXXXXXXXXXAIDIGGLLW 3
            ++ Y DF            A ++GG LW
Sbjct: 416  AHFYEDFPSMDIYEAACDYARELGGFLW 443


>ref|XP_003601071.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355490119|gb|AES71322.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 452

 Score =  536 bits (1380), Expect = e-149
 Identities = 268/430 (62%), Positives = 346/430 (80%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V+II++NFMDMVA++PA+KLD+LY + FICEA+LRSLPP+AKKYVLQ+L+ID P+ A
Sbjct: 1    MPEVRIIAKNFMDMVASMPAIKLDKLYQNGFICEAILRSLPPLAKKYVLQLLHIDGPVPA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            K L  +V+PDGLSKHKVA++RL+QLRVF+E  +++K + +Y +N  +Q  L+ ++  GG 
Sbjct: 61   KLLAEWVLPDGLSKHKVAIDRLVQLRVFVEAFDNRKNEKTYQVNSTYQKSLQNLLVHGGT 120

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PRE MP +   RLPT E+L +YA++QWE FLLQL++ +  + T    SSS++++ QR  
Sbjct: 121  LPRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVDKTLN-ISSSLMKVFQRR- 178

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLS R  E+ +LTESGFQF+LMDT++QLW IIREYI+ +E+RGVD+ +LI F+LELSFHV
Sbjct: 179  LLSQRDREAPKLTESGFQFLLMDTNAQLWYIIREYITNSEERGVDAGDLISFMLELSFHV 238

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
             G+AYNINTL++ +   I++LA LGLVKLQQG KE WFIPT LATNL+ S+ +SSSRK  
Sbjct: 239  IGEAYNINTLTEFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSVSMTESSSRK-- 296

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            EGFVVVETNFRVYAYSTSKLH  ILRLF+R+EYQLPNL VGAITKESLY AF NG+TA+Q
Sbjct: 297  EGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNAFDNGITADQ 356

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            ++SFL+Q+AHPRVAQR+P+VPENVTDQIRLWESD NRV+MT +Y Y++F           
Sbjct: 357  IVSFLRQNAHPRVAQRVPAVPENVTDQIRLWESDLNRVEMTEAYYYDEFPSRDVFEGACD 416

Query: 32   XAIDIGGLLW 3
             A +  GLLW
Sbjct: 417  CAREWSGLLW 426


>ref|XP_004972571.1| PREDICTED: general transcription factor IIH subunit 4-like [Setaria
            italica]
          Length = 451

 Score =  535 bits (1377), Expect = e-149
 Identities = 275/430 (63%), Positives = 342/430 (79%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V +++RNFMDMVAALPA KLD LYDS FICEAVLRSLPP+AKKY LQMLY+ +P+AA
Sbjct: 1    MPQVLVVARNFMDMVAALPASKLDMLYDSAFICEAVLRSLPPLAKKYALQMLYVLAPVAA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
             ++E +V+ +  SKH+VA+++L+QLRVF+EV + ++K+VSY +N KFQ  ++K +  GG+
Sbjct: 61   AAMEEWVLDEYASKHRVAIDKLLQLRVFVEVRD-RRKEVSYKMNQKFQGNMQKYLVDGGS 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREP+PLS   RLP   +L +YA+ QWE FLLQL+NS+  E     FSSSM++  QR G
Sbjct: 120  LPREPIPLSVTGRLPASADLEAYALDQWECFLLQLINSSQVE-KGTSFSSSMMKTFQR-G 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLSSR  E+ +LTE+GFQF+LM+T++QLW I+REYIS+AE+RGVD  ELI FLLELSFH 
Sbjct: 178  LLSSRDGEAPKLTENGFQFLLMETNAQLWYIMREYISSAEERGVDPTELISFLLELSFHK 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
             G AY++NTL+  E  AI +LA LGLVKLQQG K+ WFIPT LATNL+ASL DSSS K  
Sbjct: 238  LGAAYSLNTLTDVERIAIRDLAELGLVKLQQGRKDSWFIPTQLATNLSASLSDSSSSK-- 295

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            EGFVV+ETNFR+YAYSTSKLH  ILRLF+R+EYQLPNL VGAITKES+Y AF NG+TAEQ
Sbjct: 296  EGFVVLETNFRMYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESIYGAFENGITAEQ 355

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            +ISFL+Q+AHPRV  +IP VPENVTDQIRLWE+D+NRV+M PS++Y DF           
Sbjct: 356  IISFLRQNAHPRVVDKIPVVPENVTDQIRLWETDRNRVEMIPSHLYEDFPSKEWFEQCCD 415

Query: 32   XAIDIGGLLW 3
             A D G LLW
Sbjct: 416  HARDHGYLLW 425


>gb|EOY28282.1| Transcription factor-related isoform 4 [Theobroma cacao]
          Length = 445

 Score =  530 bits (1364), Expect = e-148
 Identities = 274/409 (66%), Positives = 335/409 (81%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+VKII++NFMDMVA+LPA+KLD LY + FICEA+LRS+PP+AKKYVLQMLYID P+ A
Sbjct: 1    MPQVKIIAKNFMDMVASLPAIKLDMLYRNQFICEAILRSMPPLAKKYVLQMLYIDVPVTA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            KSLE +V+ DG SKHKVA++RL+QLR+ +EV + +KK+ SY LNP FQ  LRK +  GG 
Sbjct: 61   KSLEEWVLADGSSKHKVAIDRLIQLRI-LEVID-RKKETSYKLNPTFQTNLRKHLIYGGI 118

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PREPMP +   RLPT EEL +YA +QWE FLLQL++S   E  +  FSSSM+RI QR G
Sbjct: 119  LPREPMPSNVTVRLPTSEELDAYAHEQWECFLLQLISSGQAEKPTN-FSSSMMRIFQR-G 176

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LL  R+ E+ RLTESGFQF+LMDT++QLW IIREYIS +E++GVD A+LI FLLELSFH 
Sbjct: 177  LLCQREKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEEQGVDQADLIAFLLELSFHT 236

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
            TG+AYN+NTL+  +   I++L+ LGLVKLQQG K+ WFIPT LATNL+ SL DSSSRK  
Sbjct: 237  TGEAYNMNTLTDDQRAMIKDLSDLGLVKLQQGRKDSWFIPTKLATNLSVSLTDSSSRK-- 294

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            +GFVVVETNFR+YAYS+SKLH  ILRLF+R+EYQLPNL VGAITKESLY AF NG+ AE 
Sbjct: 295  QGFVVVETNFRMYAYSSSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNAFENGIAAE- 353

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDF 66
                 QQ+AHPRVA+++PSVPENVTDQIRLWE+D NRV+MTP++ Y+DF
Sbjct: 354  -----QQNAHPRVAEKLPSVPENVTDQIRLWETDLNRVEMTPAHFYDDF 397


>ref|XP_003637396.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355503331|gb|AES84534.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 451

 Score =  529 bits (1363), Expect = e-147
 Identities = 268/430 (62%), Positives = 343/430 (79%)
 Frame = -1

Query: 1292 MPKVKIISRNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 1113
            MP+V+II++NFMDMVA++P +KLD+LY++ FICEA+LRSLPP+AKKYVLQ+ +ID P+ A
Sbjct: 1    MPEVRIIAKNFMDMVASMPTIKLDKLYENGFICEAILRSLPPLAKKYVLQLFHIDGPVPA 60

Query: 1112 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 933
            K L  +V+PDGLSKHKVA++RL+QL VF+E  +SK    +Y +NP +Q  L+K++  GG 
Sbjct: 61   KLLAEWVLPDGLSKHKVAIDRLVQLGVFVEALDSKNGK-TYKVNPTYQRSLQKLLVHGGT 119

Query: 932  PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 753
             PRE MP +   RLPT E+L +YA++QWE FLLQL++ +  + T    SSS++++ QR  
Sbjct: 120  LPRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVDKTLN-ISSSLMKVFQRR- 177

Query: 752  LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELICFLLELSFHV 573
            LLS R  E+ +LTESGFQF+LMDT++QLW IIREYI+ +E+RGVD+ +LI F+LELSFHV
Sbjct: 178  LLSQRDREAPKLTESGFQFLLMDTNAQLWYIIREYITNSEERGVDAGDLISFMLELSFHV 237

Query: 572  TGQAYNINTLSKTELKAIEELATLGLVKLQQGTKERWFIPTNLATNLAASLCDSSSRKTS 393
             G+AYNINTL++ +   I++LA LGLVKLQQG KE WFIPT LATNL+ S+ +SSSRK  
Sbjct: 238  IGEAYNINTLTEFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSVSMTESSSRK-- 295

Query: 392  EGFVVVETNFRVYAYSTSKLHSGILRLFTRLEYQLPNLFVGAITKESLYRAFSNGVTAEQ 213
            EGFVVVETNFRVYAYSTSKLH  ILRLF+R+EYQLPNL VGAITKESLY AF NG+TA+Q
Sbjct: 296  EGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNAFDNGITADQ 355

Query: 212  VISFLQQHAHPRVAQRIPSVPENVTDQIRLWESDKNRVQMTPSYMYNDFXXXXXXXXXXX 33
            ++SF +Q+AHPRVAQRIP+VPENVTDQIRLWESD NRV+MT +Y Y++F           
Sbjct: 356  IVSFFRQNAHPRVAQRIPAVPENVTDQIRLWESDLNRVEMTEAYYYDEFPSRDVFEGACD 415

Query: 32   XAIDIGGLLW 3
             A +  GLLW
Sbjct: 416  CAREWSGLLW 425