BLASTX nr result
ID: Ephedra28_contig00003114
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00003114
(492 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006298912.1| hypothetical protein CARUB_v10015033mg, part... 113 2e-23
ref|XP_006295354.1| hypothetical protein CARUB_v10024445mg, part... 112 7e-23
emb|CBI21094.3| unnamed protein product [Vitis vinifera] 111 9e-23
emb|CBI25619.3| unnamed protein product [Vitis vinifera] 110 2e-22
emb|CBI25617.3| unnamed protein product [Vitis vinifera] 110 2e-22
ref|NP_567886.1| 60S ribosomal protein L39-1 [Arabidopsis thalia... 109 3e-22
ref|NP_566167.1| 60S ribosomal protein L39-2 [Arabidopsis thalia... 109 4e-22
ref|XP_002884307.1| 60S ribosomal protein L39 [Arabidopsis lyrat... 109 4e-22
ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus co... 109 4e-22
ref|XP_006372129.1| hypothetical protein POPTR_0018s12030g [Popu... 108 7e-22
ref|XP_004287217.1| PREDICTED: 60S ribosomal protein L39-1-like ... 108 9e-22
ref|XP_002869300.1| 60S ribosomal protein L39 [Arabidopsis lyrat... 107 2e-21
ref|XP_006450329.1| hypothetical protein CICLE_v10010138mg [Citr... 107 2e-21
gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma c... 106 4e-21
gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana] 106 4e-21
ref|XP_006450330.1| hypothetical protein CICLE_v10010138mg [Citr... 105 5e-21
ref|XP_006408437.1| hypothetical protein EUTSA_v10021898mg [Eutr... 105 5e-21
gb|AEC10956.1| ribosomal protein L39e [Camellia sinensis] 105 5e-21
ref|XP_002285383.1| PREDICTED: 60S ribosomal protein L39-3-like ... 105 5e-21
ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like ... 105 6e-21
>ref|XP_006298912.1| hypothetical protein CARUB_v10015033mg, partial [Capsella rubella]
gi|482567621|gb|EOA31810.1| hypothetical protein
CARUB_v10015033mg, partial [Capsella rubella]
Length = 74
Score = 113 bits (283), Expect = 2e-23
Identities = 54/68 (79%), Positives = 57/68 (83%)
Frame = +1
Query: 46 RSLAACVLKQGENTTAKMPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRH 225
R L A V ++ KMPSHKSFMIKKKLGKKMRQNRPIPNWIR+RTDN IRYNAKRRH
Sbjct: 7 RVLNAAVFRRIATGEFKMPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNRIRYNAKRRH 66
Query: 226 WRRTKLGF 249
WRRTKLGF
Sbjct: 67 WRRTKLGF 74
>ref|XP_006295354.1| hypothetical protein CARUB_v10024445mg, partial [Capsella rubella]
gi|482564062|gb|EOA28252.1| hypothetical protein
CARUB_v10024445mg, partial [Capsella rubella]
Length = 77
Score = 112 bits (279), Expect = 7e-23
Identities = 50/59 (84%), Positives = 55/59 (93%)
Frame = +1
Query: 73 QGENTTAKMPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
+ + + KMPSHKSFMIKKKLGKKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 19 EARSQSFKMPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 77
>emb|CBI21094.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 111 bits (278), Expect = 9e-23
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = +1
Query: 85 TTAKMPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
+TAKMPSHK+F+IKKKL KKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 58 STAKMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 112
>emb|CBI25619.3| unnamed protein product [Vitis vinifera]
Length = 72
Score = 110 bits (275), Expect = 2e-22
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = +1
Query: 67 LKQGENTTAKMPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLG 246
L++ +KMPSHK+FMIKKKL KKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 12 LRRRARKISKMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 71
Query: 247 F 249
F
Sbjct: 72 F 72
>emb|CBI25617.3| unnamed protein product [Vitis vinifera]
Length = 70
Score = 110 bits (274), Expect = 2e-22
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +1
Query: 64 VLKQGENTTAKMPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKL 243
++++ +KMPSHK+FMIKKKL KKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKL
Sbjct: 9 LMRRRARKISKMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKL 68
Query: 244 GF 249
GF
Sbjct: 69 GF 70
>ref|NP_567886.1| 60S ribosomal protein L39-1 [Arabidopsis thaliana]
gi|567192156|ref|XP_006405125.1| hypothetical protein
EUTSA_v10000415mg [Eutrema salsugineum]
gi|567217808|ref|XP_006412533.1| hypothetical protein
EUTSA_v10026737mg [Eutrema salsugineum]
gi|21431843|sp|P51424.2|RL391_ARATH RecName: Full=60S
ribosomal protein L39-1
gi|13926317|gb|AAK49624.1|AF372908_1 F13D4.162/F13D4.162
[Arabidopsis thaliana] gi|16323252|gb|AAL15360.1|
AT4g31981/F13D4.162 [Arabidopsis thaliana]
gi|26451513|dbj|BAC42854.1| unknown protein [Arabidopsis
thaliana] gi|34365573|gb|AAQ65098.1| At2g25210
[Arabidopsis thaliana] gi|110740570|dbj|BAE98390.1| 60S
ribosomal protein L39 [Arabidopsis thaliana]
gi|332660586|gb|AEE85986.1| 60S ribosomal protein L39-1
[Arabidopsis thaliana] gi|557106253|gb|ESQ46578.1|
hypothetical protein EUTSA_v10000415mg [Eutrema
salsugineum] gi|557113703|gb|ESQ53986.1| hypothetical
protein EUTSA_v10026737mg [Eutrema salsugineum]
Length = 51
Score = 109 bits (273), Expect = 3e-22
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHKSFMIKKKLGKKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51
>ref|NP_566167.1| 60S ribosomal protein L39-2 [Arabidopsis thaliana]
gi|75245803|sp|Q8L8W6.1|RL392_ARATH RecName: Full=60S
ribosomal protein L39-2 gi|21618028|gb|AAM67078.1|
putative ribosomal protein L39 [Arabidopsis thaliana]
gi|26452513|dbj|BAC43341.1| putative ribosomal protein
L39 [Arabidopsis thaliana] gi|28827238|gb|AAO50463.1|
putative ribosomal protein L39 [Arabidopsis thaliana]
gi|332640255|gb|AEE73776.1| 60S ribosomal protein L39-2
[Arabidopsis thaliana]
Length = 51
Score = 109 bits (272), Expect = 4e-22
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHKSFMIKKKLGKKMRQNRPIPNWIR+RTDN IRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF 51
>ref|XP_002884307.1| 60S ribosomal protein L39 [Arabidopsis lyrata subsp. lyrata]
gi|297330147|gb|EFH60566.1| 60S ribosomal protein L39
[Arabidopsis lyrata subsp. lyrata]
Length = 51
Score = 109 bits (272), Expect = 4e-22
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHKSFMIKKKLGKKMRQNRPIPNWIR+RTDN IRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNRIRYNAKRRHWRRTKLGF 51
>ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus communis]
gi|223537230|gb|EEF38862.1| ribosomal protein L39e,
putative [Ricinus communis]
Length = 67
Score = 109 bits (272), Expect = 4e-22
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +1
Query: 91 AKMPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
AKMPSHK+F+IKKKL KKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 15 AKMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 67
>ref|XP_006372129.1| hypothetical protein POPTR_0018s12030g [Populus trichocarpa]
gi|550318562|gb|ERP49926.1| hypothetical protein
POPTR_0018s12030g [Populus trichocarpa]
Length = 104
Score = 108 bits (270), Expect = 7e-22
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +1
Query: 91 AKMPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
AKMPSHK+F IKKKL KKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 52 AKMPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 104
>ref|XP_004287217.1| PREDICTED: 60S ribosomal protein L39-1-like [Fragaria vesca subsp.
vesca]
Length = 51
Score = 108 bits (269), Expect = 9e-22
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHK+F+IKKKLGKKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_002869300.1| 60S ribosomal protein L39 [Arabidopsis lyrata subsp. lyrata]
gi|297821901|ref|XP_002878833.1| 60S ribosomal protein
L39 [Arabidopsis lyrata subsp. lyrata]
gi|297315136|gb|EFH45559.1| 60S ribosomal protein L39
[Arabidopsis lyrata subsp. lyrata]
gi|297324672|gb|EFH55092.1| 60S ribosomal protein L39
[Arabidopsis lyrata subsp. lyrata]
Length = 51
Score = 107 bits (267), Expect = 2e-21
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHKSFMIKKKL KKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_006450329.1| hypothetical protein CICLE_v10010138mg [Citrus clementina]
gi|568840009|ref|XP_006473965.1| PREDICTED: 60S
ribosomal protein L39-3-like [Citrus sinensis]
gi|568859839|ref|XP_006483440.1| PREDICTED: 60S
ribosomal protein L39-3-like [Citrus sinensis]
gi|209967447|gb|ACJ02352.1| 60S ribosomal protein L39
[Vernicia fordii] gi|257219568|gb|ACV50437.1| 60S
ribosomal protein L39 [Jatropha curcas]
gi|557553555|gb|ESR63569.1| hypothetical protein
CICLE_v10010138mg [Citrus clementina]
Length = 51
Score = 107 bits (267), Expect = 2e-21
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHK+FMIKKKL KKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma cacao]
Length = 51
Score = 106 bits (264), Expect = 4e-21
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHK+FMIKKKL KKMRQNRPIP WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana]
Length = 51
Score = 106 bits (264), Expect = 4e-21
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHKSF+IKKKL KKMRQNRPIP WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFLIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_006450330.1| hypothetical protein CICLE_v10010138mg [Citrus clementina]
gi|557553556|gb|ESR63570.1| hypothetical protein
CICLE_v10010138mg [Citrus clementina]
Length = 53
Score = 105 bits (263), Expect = 5e-21
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +1
Query: 94 KMPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
+ PSHK+FMIKKKL KKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 2 EQPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 53
>ref|XP_006408437.1| hypothetical protein EUTSA_v10021898mg [Eutrema salsugineum]
gi|557109583|gb|ESQ49890.1| hypothetical protein
EUTSA_v10021898mg [Eutrema salsugineum]
Length = 51
Score = 105 bits (263), Expect = 5e-21
Identities = 47/51 (92%), Positives = 49/51 (96%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHK+FMIKKKL KKMRQNRPIPNWIR+RTDN IRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF 51
>gb|AEC10956.1| ribosomal protein L39e [Camellia sinensis]
Length = 51
Score = 105 bits (263), Expect = 5e-21
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHK+FMIKKKL KK+RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKIRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_002285383.1| PREDICTED: 60S ribosomal protein L39-3-like [Vitis vinifera]
gi|508782121|gb|EOY29377.1| Ribosomal protein L39 family
protein [Theobroma cacao]
Length = 51
Score = 105 bits (263), Expect = 5e-21
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHK+F+IKKKL KKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum lycopersicum]
gi|565353539|ref|XP_006343687.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
gi|565366803|ref|XP_006350074.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
Length = 51
Score = 105 bits (262), Expect = 6e-21
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = +1
Query: 97 MPSHKSFMIKKKLGKKMRQNRPIPNWIRMRTDNTIRYNAKRRHWRRTKLGF 249
MPSHKSFMIKKKL KK RQNRPIP WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51