BLASTX nr result
ID: Ephedra28_contig00003047
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00003047
(2302 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE75813.1| unknown [Picea sitchensis] 90 1e-16
ref|XP_004299135.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 93 4e-16
gb|EMJ11486.1| hypothetical protein PRUPE_ppa002741mg [Prunus pe... 93 4e-16
gb|ABR16327.1| unknown [Picea sitchensis] 93 4e-16
gb|EXB93551.1| DEAD-box ATP-dependent RNA helicase 20 [Morus not... 93 6e-16
gb|AFW97645.1| cold responsive DEAD-box RNA helicase [Chorispora... 93 6e-16
ref|XP_002318665.2| ethylene-responsive DEAD box RNA helicase fa... 93 6e-16
ref|XP_006280218.1| hypothetical protein CARUB_v10026128mg [Caps... 93 6e-16
ref|XP_006280217.1| hypothetical protein CARUB_v10026128mg [Caps... 93 6e-16
emb|CBI14965.3| unnamed protein product [Vitis vinifera] 93 6e-16
ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 93 6e-16
ref|XP_006366150.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 92 8e-16
gb|EOY27072.1| DEA(D/H)-box RNA helicase family protein [Theobro... 92 8e-16
gb|EJD48975.1| DEAD-domain-containing protein [Auricularia delic... 92 8e-16
ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 92 8e-16
ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putativ... 92 8e-16
emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera] 92 8e-16
ref|XP_006476871.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 92 1e-15
ref|XP_006476870.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 92 1e-15
ref|XP_006439909.1| hypothetical protein CICLE_v10019394mg [Citr... 92 1e-15
>gb|ADE75813.1| unknown [Picea sitchensis]
Length = 284
Score = 89.7 bits (221), Expect(2) = 1e-16
Identities = 37/51 (72%), Positives = 48/51 (94%)
Frame = -2
Query: 327 KTLEDLIKDRWLCSLEDGEVGLGARAFIKLKSLFKNLDVPFCEVCNETGIR 175
KTLEDL+K+RWLC+ E+G++GLG RAF++L+SLFKNLDVPFC+VCNE GI+
Sbjct: 157 KTLEDLLKNRWLCATEEGKIGLGIRAFLELRSLFKNLDVPFCDVCNEAGIK 207
Score = 26.2 bits (56), Expect(2) = 1e-16
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -3
Query: 398 RQDSQDDQN-LPLAFKQFSVAQ 336
+Q+SQ D +P AFKQFS+AQ
Sbjct: 133 KQESQGDPGQVPSAFKQFSMAQ 154
>ref|XP_004299135.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Fragaria
vesca subsp. vesca]
Length = 606
Score = 93.2 bits (230), Expect = 4e-16
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKIVSQ
Sbjct: 312 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQ 364
>gb|EMJ11486.1| hypothetical protein PRUPE_ppa002741mg [Prunus persica]
Length = 638
Score = 93.2 bits (230), Expect = 4e-16
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKIVSQ
Sbjct: 341 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQ 393
>gb|ABR16327.1| unknown [Picea sitchensis]
Length = 504
Score = 93.2 bits (230), Expect = 4e-16
Identities = 46/53 (86%), Positives = 51/53 (96%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE+Q+TNLRRV LVLDEADRMLDMGFEPQ++KIVSQ
Sbjct: 221 KGVEIVIATPGRLIDMLESQHTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQ 273
>gb|EXB93551.1| DEAD-box ATP-dependent RNA helicase 20 [Morus notabilis]
Length = 625
Score = 92.8 bits (229), Expect = 6e-16
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKI+SQ
Sbjct: 326 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQ 378
>gb|AFW97645.1| cold responsive DEAD-box RNA helicase [Chorispora bungeana]
Length = 595
Score = 92.8 bits (229), Expect = 6e-16
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKIVSQ
Sbjct: 289 RGVEIVIATPGRLIDMLECQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQ 341
>ref|XP_002318665.2| ethylene-responsive DEAD box RNA helicase family protein [Populus
trichocarpa] gi|550326679|gb|EEE96885.2|
ethylene-responsive DEAD box RNA helicase family protein
[Populus trichocarpa]
Length = 543
Score = 92.8 bits (229), Expect = 6e-16
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKI+SQ
Sbjct: 244 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQ 296
>ref|XP_006280218.1| hypothetical protein CARUB_v10026128mg [Capsella rubella]
gi|482548922|gb|EOA13116.1| hypothetical protein
CARUB_v10026128mg [Capsella rubella]
Length = 594
Score = 92.8 bits (229), Expect = 6e-16
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKIVSQ
Sbjct: 288 RGVEIVIATPGRLIDMLECQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQ 340
>ref|XP_006280217.1| hypothetical protein CARUB_v10026128mg [Capsella rubella]
gi|482548921|gb|EOA13115.1| hypothetical protein
CARUB_v10026128mg [Capsella rubella]
Length = 486
Score = 92.8 bits (229), Expect = 6e-16
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKIVSQ
Sbjct: 288 RGVEIVIATPGRLIDMLECQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQ 340
>emb|CBI14965.3| unnamed protein product [Vitis vinifera]
Length = 611
Score = 92.8 bits (229), Expect = 6e-16
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKI+SQ
Sbjct: 418 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQ 470
>ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Vitis
vinifera]
Length = 611
Score = 92.8 bits (229), Expect = 6e-16
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKI+SQ
Sbjct: 311 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQ 363
>ref|XP_006366150.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like isoform X1
[Solanum tuberosum] gi|565401320|ref|XP_006366151.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like
isoform X2 [Solanum tuberosum]
Length = 501
Score = 92.4 bits (228), Expect = 8e-16
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE+ +TNLRRV LVLDEADRMLDMGFEPQ+RKIVSQ
Sbjct: 218 KGVEIVIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQ 270
>gb|EOY27072.1| DEA(D/H)-box RNA helicase family protein [Theobroma cacao]
Length = 505
Score = 92.4 bits (228), Expect = 8e-16
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE+ +TNLRRV LVLDEADRMLDMGFEPQ+RKIVSQ
Sbjct: 221 KGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQ 273
>gb|EJD48975.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 531
Score = 92.4 bits (228), Expect = 8e-16
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE+Q TNLRR+ LVLDEADRMLDMGFEPQ+RKIVSQ
Sbjct: 225 RGVEIVIATPGRLIDMLESQKTNLRRITYLVLDEADRMLDMGFEPQIRKIVSQ 277
>ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
gi|297743075|emb|CBI35942.3| unnamed protein product
[Vitis vinifera]
Length = 506
Score = 92.4 bits (228), Expect = 8e-16
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE+ +TNLRRV LVLDEADRMLDMGFEPQ+RKIVSQ
Sbjct: 222 KGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQ 274
>ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547784|gb|EEF49276.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 540
Score = 92.4 bits (228), Expect = 8e-16
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RK+VSQ
Sbjct: 347 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKLVSQ 399
>emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera]
Length = 692
Score = 92.4 bits (228), Expect = 8e-16
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = -1
Query: 175 GVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKI+SQ
Sbjct: 432 GVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQ 483
>ref|XP_006476871.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like isoform X2
[Citrus sinensis]
Length = 493
Score = 92.0 bits (227), Expect = 1e-15
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKIV+Q
Sbjct: 300 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQ 352
>ref|XP_006476870.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like isoform X1
[Citrus sinensis]
Length = 599
Score = 92.0 bits (227), Expect = 1e-15
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKIV+Q
Sbjct: 300 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQ 352
>ref|XP_006439909.1| hypothetical protein CICLE_v10019394mg [Citrus clementina]
gi|557542171|gb|ESR53149.1| hypothetical protein
CICLE_v10019394mg [Citrus clementina]
Length = 599
Score = 92.0 bits (227), Expect = 1e-15
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = -1
Query: 178 QGVEIVIATPGRLIDMLENQYTNLRRVASLVLDEADRMLDMGFEPQMRKIVSQ 20
+GVEIVIATPGRLIDMLE Q+TNLRRV LVLDEADRMLDMGFEPQ+RKIV+Q
Sbjct: 300 RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVTQ 352