BLASTX nr result

ID: Ephedra28_contig00003046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00003046
         (432 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21369.1| unknown [Picea sitchensis]                              60   4e-07
ref|XP_006852592.1| hypothetical protein AMTR_s00021p00216850 [A...    57   2e-06
ref|XP_004961355.1| PREDICTED: uncharacterized protein LOC101760...    56   4e-06
gb|AEC10991.1| fiber protein fb11 [Camellia sinensis]                  56   4e-06
ref|NP_001148662.1| LOC100282278 [Zea mays] gi|242091243|ref|XP_...    56   4e-06
gb|AFW78944.1| fiber protein Fb11, partial [Zea mays]                  56   6e-06
gb|ACF82662.1| unknown [Zea mays] gi|194704466|gb|ACF86317.1| un...    56   6e-06
ref|XP_002265113.1| PREDICTED: uncharacterized protein LOC100257...    56   6e-06

>gb|ABK21369.1| unknown [Picea sitchensis]
          Length = 65

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 24/46 (52%), Positives = 36/46 (78%)
 Frame = -3

Query: 430 FVSCLLGGLGVFLPAVVKPILEKTSTADPVEQPSLNQVITGMTGRQ 293
           F SC +GG+G+ LPA V+PIL+   +++ V QPSLN+V+ GMTG++
Sbjct: 18  FASCFIGGIGLILPAFVRPILDSMDSSEAVPQPSLNKVVAGMTGKK 63


>ref|XP_006852592.1| hypothetical protein AMTR_s00021p00216850 [Amborella trichopoda]
           gi|548856203|gb|ERN14059.1| hypothetical protein
           AMTR_s00021p00216850 [Amborella trichopoda]
          Length = 64

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = -3

Query: 424 SCLLGGLGVFLPAVVKPILEKTSTADPVEQPSLNQVITGMTGRQ 293
           SCL+ G+G+FLPAVV+PIL+   T+  V QP+L+ V+ GMTG++
Sbjct: 20  SCLIAGVGLFLPAVVRPILDSMETSKQVPQPALSDVVAGMTGKK 63


>ref|XP_004961355.1| PREDICTED: uncharacterized protein LOC101760925 [Setaria italica]
          Length = 64

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -3

Query: 424 SCLLGGLGVFLPAVVKPILEKTSTADPVEQPSLNQVITGMTGRQ 293
           SCL+ G G+FLPAVV+PIL+   TA+ V  P LN V+ G+TG++
Sbjct: 20  SCLIAGFGLFLPAVVRPILDSWETAEKVPPPPLNDVVAGVTGKK 63


>gb|AEC10991.1| fiber protein fb11 [Camellia sinensis]
          Length = 64

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -3

Query: 424 SCLLGGLGVFLPAVVKPILEKTSTADPVEQPSLNQVITGMTGRQ 293
           SCL+ G G+FLPAVV+PIL+   T+  V  P+LN V+ GMTG++
Sbjct: 20  SCLIAGFGLFLPAVVRPILDSFETSKQVPPPALNDVVAGMTGKK 63


>ref|NP_001148662.1| LOC100282278 [Zea mays] gi|242091243|ref|XP_002441454.1|
           hypothetical protein SORBIDRAFT_09g027070 [Sorghum
           bicolor] gi|195609012|gb|ACG26336.1| fiber protein Fb11
           [Zea mays] gi|195621188|gb|ACG32424.1| fiber protein
           Fb11 [Zea mays] gi|195658433|gb|ACG48684.1| fiber
           protein Fb11 [Zea mays] gi|241946739|gb|EES19884.1|
           hypothetical protein SORBIDRAFT_09g027070 [Sorghum
           bicolor] gi|413948287|gb|AFW80936.1| fiber protein Fb11
           [Zea mays]
          Length = 64

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -3

Query: 424 SCLLGGLGVFLPAVVKPILEKTSTADPVEQPSLNQVITGMTGRQ 293
           SCL+ G G+FLPAVV+PIL+   TA+ V  P LN V+ G+TG++
Sbjct: 20  SCLIAGFGLFLPAVVRPILDSWETAEKVPPPPLNDVVAGVTGKK 63


>gb|AFW78944.1| fiber protein Fb11, partial [Zea mays]
          Length = 132

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -3

Query: 424 SCLLGGLGVFLPAVVKPILEKTSTADPVEQPSLNQVITGMTGRQ 293
           SCL+ G G+FLPAVV+PIL+   TA+ V  P LN V+ G+TG++
Sbjct: 88  SCLIAGFGLFLPAVVRPILDSWQTAEQVPPPLLNDVVAGVTGKK 131


>gb|ACF82662.1| unknown [Zea mays] gi|194704466|gb|ACF86317.1| unknown [Zea mays]
           gi|195610118|gb|ACG26889.1| fiber protein Fb11 [Zea
           mays] gi|195615292|gb|ACG29476.1| fiber protein Fb11
           [Zea mays]
          Length = 64

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -3

Query: 424 SCLLGGLGVFLPAVVKPILEKTSTADPVEQPSLNQVITGMTGRQ 293
           SCL+ G G+FLPAVV+PIL+   TA+ V  P LN V+ G+TG++
Sbjct: 20  SCLIAGFGLFLPAVVRPILDSWQTAEQVPPPLLNDVVAGVTGKK 63


>ref|XP_002265113.1| PREDICTED: uncharacterized protein LOC100257117 [Vitis vinifera]
           gi|297745487|emb|CBI40567.3| unnamed protein product
           [Vitis vinifera]
          Length = 65

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/44 (52%), Positives = 34/44 (77%)
 Frame = -3

Query: 424 SCLLGGLGVFLPAVVKPILEKTSTADPVEQPSLNQVITGMTGRQ 293
           SC + G+G+FLPAVV+PIL+   T+  V QP+L+ V+ GMTG++
Sbjct: 20  SCFIAGVGLFLPAVVRPILDSLETSKQVPQPALSDVVAGMTGKK 63


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