BLASTX nr result

ID: Ephedra28_contig00002983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002983
         (969 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17412.1| unknown [Picea sitchensis]                              50   4e-08

>gb|ABR17412.1| unknown [Picea sitchensis]
          Length = 247

 Score = 50.4 bits (119), Expect(2) = 4e-08
 Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
 Frame = +1

Query: 277 EESSAAMRRPKTQPELVLR--------------RPSSANALLHXXXXXXXXXXXXXXXXG 414
           + ++  MRRPKTQPEL+ R              + SS N LL                  
Sbjct: 72  KNTTTMMRRPKTQPELLNRDDHNMKMKMNNPVDQASSVNKLL------------VSITIA 119

Query: 415 QSSGPLRVLICEDATVQDVMKEVISLYSKEG 507
           QS GPLR+L+ +DATV++V+K    LY+KEG
Sbjct: 120 QSIGPLRLLLFKDATVEEVIKAAFVLYAKEG 150



 Score = 34.7 bits (78), Expect(2) = 4e-08
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
 Frame = +2

Query: 527 IKDLGSRDFFMRLKEQTVKDDCIATACTNGSSVNRIPGSG-------AGIC-----WYSK 670
           IKDLGSR+FF+  K  T K+ C        ++V R   S         GI      WY+K
Sbjct: 180 IKDLGSRNFFLCPKA-TAKEICSLNFKGGETAVGRSSSSSYSCGREIQGISRLRGPWYNK 238

Query: 671 LVHCILVP 694
           L+ C+L+P
Sbjct: 239 LLDCLLLP 246


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