BLASTX nr result

ID: Ephedra28_contig00002873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002873
         (520 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76020.1| unknown [Picea sitchensis]                              56   4e-06

>gb|ADE76020.1| unknown [Picea sitchensis]
          Length = 242

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
 Frame = +1

Query: 97  GFAGIGYVLSDPNGNVIKEFSARFAHNATTNIAAYKALLAGLQHASELQCIDTVLIIGTP 276
           G AGIG++L D NG V++ F +   +  T N+A YKAL+AGLQHA +           + 
Sbjct: 36  GTAGIGFLLKDSNGEVVERFCSLLGYKLTNNVAEYKALIAGLQHALDHGITSIQAYGDSE 95

Query: 277 FVANEMKWSIAGIRSGAPPDHIIDRYNYAFKELSEQFN---QLM--IESAPSRAKPKDK- 438
            +  ++                  +Y  A + L+  +N   QL+   ES      P+D+ 
Sbjct: 96  LICKQVN----------------GQYRVANRRLARYYNTVCQLLGKFESHEVLHVPRDEN 139

Query: 439 WRAEQLAYEGIEDPCVHLDAREVLK 513
             A+ LA +GI+ P V   +   L+
Sbjct: 140 CAADDLANDGIDRPVVDTSSAAQLR 164


Top