BLASTX nr result

ID: Ephedra28_contig00002833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002833
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26441.1| unknown [Picea sitchensis]                              58   2e-06
gb|ABK23946.1| unknown [Picea sitchensis]                              55   7e-06

>gb|ABK26441.1| unknown [Picea sitchensis]
          Length = 249

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 38/113 (33%), Positives = 49/113 (43%)
 Frame = +1

Query: 67  MLAVINKSVTPGPNELASPGSSSPSDDKANKLMNAADLLGDFXXXXXXXXXXXXGDIGXX 246
           ML V+ KSV  GP EL SP        +A+K  N  DL+  F            GD+G  
Sbjct: 1   MLTVLKKSVAQGPEELTSPHV------EADKRKNGIDLVHSFVSANSGTVSINLGDVGAI 54

Query: 247 XXXXXXXXXXXXXXXXXXXXXXFAVEDGVYCFFMGILDNAGVVRREYGLSSKA 405
                                 FAV D ++C F GILDN  V+R++YGL+  A
Sbjct: 55  AYTHSRQPLLTPRS--------FAVVDDIFCIFEGILDNVAVLRQQYGLNKSA 99


>gb|ABK23946.1| unknown [Picea sitchensis]
          Length = 249

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 37/113 (32%), Positives = 47/113 (41%)
 Frame = +1

Query: 67  MLAVINKSVTPGPNELASPGSSSPSDDKANKLMNAADLLGDFXXXXXXXXXXXXGDIGXX 246
           ML V+ KSV  GP EL SP        +A+K  N  DL+  F            GD+G  
Sbjct: 1   MLTVLKKSVAQGPEELTSPHV------EADKRKNGIDLVHSFVSANSGTVCINLGDVGAI 54

Query: 247 XXXXXXXXXXXXXXXXXXXXXXFAVEDGVYCFFMGILDNAGVVRREYGLSSKA 405
                                 F V D ++C F GILDN  V+R+ YGL+  A
Sbjct: 55  AYTHSRQPLLTPRS--------FGVVDDIFCIFEGILDNVAVLRQRYGLNKSA 99


Top