BLASTX nr result
ID: Ephedra28_contig00002728
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00002728
(389 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK25253.1| unknown [Picea sitchensis] 91 7e-18
gb|ABR18422.1| unknown [Picea sitchensis] 91 7e-18
ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote... 91 3e-17
emb|CBI16387.3| unnamed protein product [Vitis vinifera] 91 3e-17
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote... 91 3e-17
ref|XP_001777334.1| predicted protein [Physcomitrella patens] gi... 92 5e-17
ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 91 6e-17
ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP... 91 6e-17
ref|XP_004486966.1| PREDICTED: polyadenylate-binding protein RBP... 91 1e-16
ref|XP_004486967.1| PREDICTED: polyadenylate-binding protein RBP... 91 1e-16
gb|ESW22363.1| hypothetical protein PHAVU_005G147800g [Phaseolus... 91 2e-16
ref|XP_002313332.2| hypothetical protein POPTR_0009s05920g [Popu... 91 2e-16
ref|XP_001784132.1| predicted protein [Physcomitrella patens] gi... 91 2e-16
ref|XP_006850190.1| hypothetical protein AMTR_s00022p00247520 [A... 88 2e-16
ref|XP_006470600.1| PREDICTED: polyadenylate-binding protein RBP... 90 3e-16
ref|XP_006446110.1| hypothetical protein CICLE_v10015576mg [Citr... 90 3e-16
ref|XP_003597428.1| RNA-binding protein [Medicago truncatula] gi... 90 3e-16
ref|XP_002513488.1| nuclear acid binding protein, putative [Rici... 89 5e-16
gb|EMJ10353.1| hypothetical protein PRUPE_ppa005940mg [Prunus pe... 87 5e-16
gb|EXC19904.1| Polyadenylate-binding protein RBP47B' [Morus nota... 86 1e-15
>gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 90.5 bits (223), Expect(2) = 7e-18
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHA AE+ LQ++NG QMPNTEQ++RLNWATFGIGEKRP+ GP
Sbjct: 121 GYGFVEFASHAGAERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGP 170
Score = 25.4 bits (54), Expect(2) = 7e-18
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
TS D++RTLWVG
Sbjct: 73 TSADEVRTLWVG 84
>gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 90.5 bits (223), Expect(2) = 7e-18
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHA AE+ LQ++NG QMPNTEQ++RLNWATFGIGEKRP+ GP
Sbjct: 121 GYGFVEFASHAGAERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGP 170
Score = 25.4 bits (54), Expect(2) = 7e-18
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
TS D++RTLWVG
Sbjct: 73 TSADEVRTLWVG 84
>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 90.9 bits (224), Expect(2) = 3e-17
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHAAAE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 83 GYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 132
Score = 23.1 bits (48), Expect(2) = 3e-17
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
TS +++RTLW+G
Sbjct: 35 TSVEEVRTLWIG 46
>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 90.9 bits (224), Expect(2) = 3e-17
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHAAAE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 83 GYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 132
Score = 23.1 bits (48), Expect(2) = 3e-17
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
TS +++RTLW+G
Sbjct: 35 TSVEEVRTLWIG 46
>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 90.9 bits (224), Expect(2) = 3e-17
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHAAAE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 83 GYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 132
Score = 23.1 bits (48), Expect(2) = 3e-17
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
TS +++RTLW+G
Sbjct: 35 TSVEEVRTLWIG 46
>ref|XP_001777334.1| predicted protein [Physcomitrella patens]
gi|168061528|ref|XP_001782740.1| predicted protein
[Physcomitrella patens] gi|162665773|gb|EDQ52446.1|
predicted protein [Physcomitrella patens]
gi|162671310|gb|EDQ57864.1| predicted protein
[Physcomitrella patens]
Length = 416
Score = 92.4 bits (228), Expect = 5e-17
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHAAAEK+LQ+YNG QMPNTEQ FRLNWA+FGIGE+RP+ GP
Sbjct: 50 GYGFVEFVSHAAAEKILQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGP 99
>ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 90.9 bits (224), Expect(2) = 6e-17
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHAAAE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 62 GYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 111
Score = 21.9 bits (45), Expect(2) = 6e-17
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
T+ +++RTLW+G
Sbjct: 14 TTVEEVRTLWIG 25
>ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 90.9 bits (224), Expect(2) = 6e-17
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHAAAE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 62 GYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 111
Score = 21.9 bits (45), Expect(2) = 6e-17
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
T+ +++RTLW+G
Sbjct: 14 TTVEEVRTLWIG 25
>ref|XP_004486966.1| PREDICTED: polyadenylate-binding protein RBP47B'-like isoform X1
[Cicer arietinum]
Length = 429
Score = 90.9 bits (224), Expect(2) = 1e-16
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SH AAE+VLQSYNG QMP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 57 GYGFVEFVSHTAAERVLQSYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 106
Score = 21.2 bits (43), Expect(2) = 1e-16
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
+S +++RTLW+G
Sbjct: 9 SSLEEVRTLWIG 20
>ref|XP_004486967.1| PREDICTED: polyadenylate-binding protein RBP47B'-like isoform X2
[Cicer arietinum]
Length = 427
Score = 90.9 bits (224), Expect(2) = 1e-16
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SH AAE+VLQSYNG QMP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 57 GYGFVEFVSHTAAERVLQSYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 106
Score = 21.2 bits (43), Expect(2) = 1e-16
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
+S +++RTLW+G
Sbjct: 9 SSLEEVRTLWIG 20
>gb|ESW22363.1| hypothetical protein PHAVU_005G147800g [Phaseolus vulgaris]
Length = 424
Score = 90.9 bits (224), Expect = 2e-16
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHA+AE+VLQ+YNG+QMP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 60 GYGFVEFVSHASAERVLQTYNGMQMPGTEQTFRLNWASFGIGERRPDAGP 109
>ref|XP_002313332.2| hypothetical protein POPTR_0009s05920g [Populus trichocarpa]
gi|550331124|gb|EEE87287.2| hypothetical protein
POPTR_0009s05920g [Populus trichocarpa]
Length = 416
Score = 90.9 bits (224), Expect = 2e-16
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHAAAE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 62 GYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 111
>ref|XP_001784132.1| predicted protein [Physcomitrella patens]
gi|162664332|gb|EDQ51056.1| predicted protein
[Physcomitrella patens]
Length = 453
Score = 90.9 bits (224), Expect = 2e-16
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SH AAEK+LQ+YNG QMPNTEQ FRLNWA+FGIGE+RP+ GP
Sbjct: 85 GYGFVEFVSHVAAEKILQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGP 134
>ref|XP_006850190.1| hypothetical protein AMTR_s00022p00247520 [Amborella trichopoda]
gi|548853788|gb|ERN11771.1| hypothetical protein
AMTR_s00022p00247520 [Amborella trichopoda]
Length = 451
Score = 87.8 bits (216), Expect(2) = 2e-16
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHAAAE++LQ+YNG MP TEQ FR+NWA+FGIGE+RPD GP
Sbjct: 87 GYGFVEFVSHAAAERILQTYNGTPMPGTEQCFRMNWASFGIGERRPDAGP 136
Score = 23.5 bits (49), Expect(2) = 2e-16
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
TS ++IRTLW+G
Sbjct: 39 TSVEEIRTLWIG 50
>ref|XP_006470600.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Citrus
sinensis]
Length = 424
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHAAAE+VLQ+YNG MP TEQ FRLNWA+FGIGEKRPD GP
Sbjct: 66 GYGFVEFVSHAAAERVLQTYNGTPMPGTEQNFRLNWASFGIGEKRPDAGP 115
>ref|XP_006446110.1| hypothetical protein CICLE_v10015576mg [Citrus clementina]
gi|557548721|gb|ESR59350.1| hypothetical protein
CICLE_v10015576mg [Citrus clementina]
Length = 385
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHAAAE+VLQ+YNG MP TEQ FRLNWA+FGIGEKRPD GP
Sbjct: 66 GYGFVEFVSHAAAERVLQTYNGTPMPGTEQNFRLNWASFGIGEKRPDAGP 115
>ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein
[Medicago truncatula]
Length = 428
Score = 89.7 bits (221), Expect(2) = 3e-16
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGF+EF SH+AAE+VLQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 57 GYGFIEFVSHSAAERVLQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 106
Score = 20.8 bits (42), Expect(2) = 3e-16
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +3
Query: 150 SPDDIRTLWVG 182
S +++RTLW+G
Sbjct: 10 SLEEVRTLWIG 20
>ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding
protein, putative [Ricinus communis]
Length = 412
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SH AAE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 64 GYGFVEFVSHVAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGP 113
>gb|EMJ10353.1| hypothetical protein PRUPE_ppa005940mg [Prunus persica]
Length = 436
Score = 86.7 bits (213), Expect(2) = 5e-16
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGP 388
GYGFVEF SHAAAE+VL +YNG MP TEQ FRLNWA+FGIGE+RPD GP
Sbjct: 75 GYGFVEFVSHAAAERVLHAYNGTLMPGTEQNFRLNWASFGIGERRPDAGP 124
Score = 23.1 bits (48), Expect(2) = 5e-16
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
TS +++RTLW+G
Sbjct: 27 TSVEEVRTLWIG 38
>gb|EXC19904.1| Polyadenylate-binding protein RBP47B' [Morus notabilis]
Length = 469
Score = 86.3 bits (212), Expect(2) = 1e-15
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = +2
Query: 239 GYGFVEFHSHAAAEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPD 379
GYGFVEF SHAAAE++LQSYNG +MP TEQ FRLNWA+FGIGE+RPD
Sbjct: 78 GYGFVEFVSHAAAERILQSYNGTKMPGTEQTFRLNWASFGIGERRPD 124
Score = 21.9 bits (45), Expect(2) = 1e-15
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +3
Query: 147 TSPDDIRTLWVG 182
T+ +++RTLW+G
Sbjct: 30 TTVEEVRTLWIG 41