BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002707
         (1357 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24003.1| unknown [Picea sitchensis]                             313   8e-83
gb|ABK23251.1| unknown [Picea sitchensis]                             308   4e-81
gb|ABR17662.1| unknown [Picea sitchensis]                             300   1e-78
gb|ABK21727.1| unknown [Picea sitchensis] gi|116793253|gb|ABK266...   280   8e-73
ref|XP_006285334.1| hypothetical protein CARUB_v10006724mg [Caps...   237   7e-60
ref|XP_002869670.1| hypothetical protein ARALYDRAFT_492278 [Arab...   234   8e-59
ref|NP_194280.1| arginine/serine-rich splicing factor 35 [Arabid...   232   2e-58
ref|NP_001078447.1| arginine/serine-rich splicing factor 35 [Ara...   232   2e-58
gb|AAS00039.1| splicing factor-like protein [Vitis riparia]           231   4e-58
ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac...   231   5e-58
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]   231   5e-58
dbj|BAH20075.1| AT4G25500 [Arabidopsis thaliana]                      231   7e-58
gb|AAB18813.1| splicing factor At-SRp40 [Arabidopsis thaliana]        230   1e-57
emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis thaliana]       230   1e-57
gb|EXC15932.1| Arginine/serine-rich-splicing factor RSP40 [Morus...   227   8e-57
ref|XP_004308115.1| PREDICTED: arginine/serine-rich-splicing fac...   227   1e-56
gb|EMJ19230.1| hypothetical protein PRUPE_ppa005993mg [Prunus pe...   227   1e-56
ref|XP_004251258.1| PREDICTED: arginine/serine-rich-splicing fac...   226   2e-56
ref|XP_004149584.1| PREDICTED: arginine/serine-rich-splicing fac...   226   2e-56
ref|XP_006857904.1| hypothetical protein AMTR_s00069p00132220 [A...   225   4e-56

>gb|ABK24003.1| unknown [Picea sitchensis]
          Length = 289

 Score =  313 bits (803), Expect = 8e-83
 Identities = 163/256 (63%), Positives = 185/256 (72%), Gaps = 5/256 (1%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 1062
            GYAFVYMEDERDAE AI +LD+TEFGRQRRRL VEWTKH +RG RR+E G+RS   LKPT
Sbjct: 36   GYAFVYMEDERDAEDAIRALDKTEFGRQRRRLTVEWTKHAERGLRRSEDGRRSVTGLKPT 95

Query: 1061 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 882
            KTLFVINFDP+ TR RD+ERHFEPYGK+LNVRIRRNFAF+ + TQ+EATKA D TH+S +
Sbjct: 96   KTLFVINFDPYDTRARDLERHFEPYGKVLNVRIRRNFAFIHYGTQEEATKAFDATHMSTL 155

Query: 881  LDKVITVEYAQ-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGR 717
            LD+VITVEYAQ                                 P YGRRA RGSPDYGR
Sbjct: 156  LDRVITVEYAQREDGNRRGGPSSPIRGGRYGRSSEDHGRDRSASPIYGRRAMRGSPDYGR 215

Query: 716  APSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRASS 537
            APSP YARR ER SPDY RA SP+YSRR E+   +Y RA SP Y  RP+K+S DYGR +S
Sbjct: 216  APSPTYARRPERCSPDYGRATSPIYSRRPEKHGSDYGRAASPVYASRPQKNSLDYGRDAS 275

Query: 536  PNNERERSLSRSPVRQ 489
            P  ER+R  SRSPVR+
Sbjct: 276  PLLERDR--SRSPVRR 289


>gb|ABK23251.1| unknown [Picea sitchensis]
          Length = 299

 Score =  308 bits (788), Expect = 4e-81
 Identities = 159/256 (62%), Positives = 183/256 (71%), Gaps = 5/256 (1%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 1062
            GYAF+YMEDERDAE AI  LD T+FGRQRRRL VEWTKH DRG RR E G+RS   L PT
Sbjct: 36   GYAFIYMEDERDAEDAIRGLDNTDFGRQRRRLTVEWTKHADRGFRRFEDGRRSDAGLNPT 95

Query: 1061 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 882
            KTLFVINFDP+ST+VRD+ERHFEPYGKL+ VRIRRNFAFVQ+E+Q++ATKAL++TH+SK+
Sbjct: 96   KTLFVINFDPYSTKVRDLERHFEPYGKLIYVRIRRNFAFVQYESQEDATKALESTHMSKM 155

Query: 881  LDKVITVEYAQ-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGR 717
            LD+VITVEYAQ                                 P YGRR  RGSPDYGR
Sbjct: 156  LDRVITVEYAQGEDSDRRGGYSSPIQSRRYGKAADVRDRDRSASPRYGRRPVRGSPDYGR 215

Query: 716  APSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRASS 537
            A SP+YAR  ER S DY RAPSP+Y+R  ER S +Y RA SP Y  RPR+   DYGR +S
Sbjct: 216  ARSPIYARSSERHSHDYGRAPSPIYARHPERHSHDYGRAASPVYVSRPRRDIPDYGRVAS 275

Query: 536  PNNERERSLSRSPVRQ 489
            P +ER R  SRSPVR+
Sbjct: 276  PVHERYR--SRSPVRR 289


>gb|ABR17662.1| unknown [Picea sitchensis]
          Length = 337

 Score =  300 bits (767), Expect = 1e-78
 Identities = 152/241 (63%), Positives = 177/241 (73%), Gaps = 5/241 (2%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 1062
            G+AF+YMEDE+DAE AI  LD TEFG QRRRL VEWTK+ DRG RR+E G+RS   LKPT
Sbjct: 36   GFAFIYMEDEQDAEDAIRGLDSTEFGTQRRRLSVEWTKNADRGVRRSEDGRRSVTDLKPT 95

Query: 1061 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 882
            KTLFVINFD ++T+V DIERHFEPYGKLLNVRIRRNFAFVQ+E Q++ATKAL++THLSK+
Sbjct: 96   KTLFVINFDSYNTKVEDIERHFEPYGKLLNVRIRRNFAFVQYELQEDATKALESTHLSKM 155

Query: 881  LDKVITVEYAQ-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGR 717
            LDKV+TV+YAQ                                 P +GRRA RGSPDYGR
Sbjct: 156  LDKVLTVKYAQREDGDRRGRRSSPIRRGRYSRAGEDHDRDRSASPLHGRRAVRGSPDYGR 215

Query: 716  APSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRASS 537
            A SP++ RR ERRSPDY RAPSP+Y+RR ER SP+Y RA SP Y +RP + S DYGRA S
Sbjct: 216  ASSPIHGRRPERRSPDYGRAPSPIYARRPERRSPDYGRAPSPIYAKRPERRSPDYGRAPS 275

Query: 536  P 534
            P
Sbjct: 276  P 276



 Score =  122 bits (305), Expect = 5e-25
 Identities = 58/91 (63%), Positives = 72/91 (79%)
 Frame = -3

Query: 758 YGRRATRGSPDYGRAPSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEE 579
           Y RR  R SPDYGRAPSP+YA+R ERRSPDY RAPSP+Y++R ER SP+Y RA SP Y  
Sbjct: 240 YARRPERRSPDYGRAPSPIYAKRPERRSPDYGRAPSPIYAKRPERRSPDYGRAASPVYAS 299

Query: 578 RPRKSSADYGRASSPNNERERSLSRSPVRQN 486
           R +K+S DYGR +SP +E++R  SRSP+RQ+
Sbjct: 300 RRQKNSPDYGRVASPVHEQDR--SRSPMRQS 328


>gb|ABK21727.1| unknown [Picea sitchensis] gi|116793253|gb|ABK26673.1| unknown [Picea
            sitchensis]
          Length = 271

 Score =  280 bits (717), Expect = 8e-73
 Identities = 147/252 (58%), Positives = 177/252 (70%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 1062
            GYAF+YM+DERDAE AI  LD  EFGRQRRRLCVEWTKHP++G RR EGG+RS+  +KP 
Sbjct: 36   GYAFIYMDDERDAEDAIRGLDNREFGRQRRRLCVEWTKHPEKGFRRPEGGRRSTMYIKPA 95

Query: 1061 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 882
            KTLFVINFDP  T V+D+E+HFEPYGK+LNVRIRRNFAFVQFE+Q+EATKAL +T  SK+
Sbjct: 96   KTLFVINFDPADTGVKDLEKHFEPYGKVLNVRIRRNFAFVQFESQEEATKALHSTDKSKV 155

Query: 881  LDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSPV 702
            LD +I+VEYAQ                             +YGR A        R+ SP+
Sbjct: 156  LDSIISVEYAQRDDGDRRGGRSSPVRRG------------SYGRSAEGRD----RSESPI 199

Query: 701  YARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRASSPNNER 522
            Y+RR  R SPDY RAPSP+Y+RR+ERSSP+Y RA SP Y  R ++ S DYGR  SP +ER
Sbjct: 200  YSRRALRDSPDYGRAPSPIYARRSERSSPDYGRAASPIYARRLQRDSPDYGRVLSPVHER 259

Query: 521  ERSLSRSPVRQN 486
             R  SRSPV ++
Sbjct: 260  YR--SRSPVMRS 269


>ref|XP_006285334.1| hypothetical protein CARUB_v10006724mg [Capsella rubella]
            gi|482554039|gb|EOA18232.1| hypothetical protein
            CARUB_v10006724mg [Capsella rubella]
          Length = 348

 Score =  237 bits (605), Expect = 7e-60
 Identities = 139/257 (54%), Positives = 168/257 (65%), Gaps = 6/257 (2%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 1065
            G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK    G RR+ GG +RSS  ++P
Sbjct: 36   GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKSERGGDRRSGGGSRRSSSGMRP 95

Query: 1064 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 885
            +KTLFVINFD  +TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E Q++ATKALD T+ SK
Sbjct: 96   SKTLFVINFDADNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATKALDATNNSK 155

Query: 884  ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 705
            ++DKVI+VEYA                               Y R   RGSPDYGR  SP
Sbjct: 156  LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 212

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 537
            V A R+ER SPDY R  SP   +++ R SPEY    R  DSP    R R +S  Y R  S
Sbjct: 213  VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSP--RRRERVASPKYSR--S 268

Query: 536  PNNERER-SLSRSPVRQ 489
            PNN+RER S + SP ++
Sbjct: 269  PNNKRERMSPNHSPFKK 285


>ref|XP_002869670.1| hypothetical protein ARALYDRAFT_492278 [Arabidopsis lyrata subsp.
            lyrata] gi|297315506|gb|EFH45929.1| hypothetical protein
            ARALYDRAFT_492278 [Arabidopsis lyrata subsp. lyrata]
          Length = 348

 Score =  234 bits (596), Expect = 8e-59
 Identities = 137/257 (53%), Positives = 167/257 (64%), Gaps = 6/257 (2%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 1065
            G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK    G RR+ GG +RSS  ++P
Sbjct: 36   GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKSEREGDRRSGGGSRRSSSGMRP 95

Query: 1064 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 885
            +KTLFVINFD  +TR RD+ERHFEPYGK+LNVRIRRNFAF+Q+E Q++AT+ALD T+ SK
Sbjct: 96   SKTLFVINFDADNTRTRDLERHFEPYGKILNVRIRRNFAFIQYEAQEDATRALDATNNSK 155

Query: 884  ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 705
            ++DKVI+VEYA                               Y R   RGSPDYGR  SP
Sbjct: 156  LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 212

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 537
            V A R++R SPDY R  SP   +++   SPEY    R  DSP    R R +S  Y R  S
Sbjct: 213  VAAYRKDRTSPDYGRRRSPSPYKKSRCGSPEYGRDRRGNDSP--RRRERVASPKYSR--S 268

Query: 536  PNNERER-SLSRSPVRQ 489
            PNN+RER S + SP ++
Sbjct: 269  PNNKRERMSPNHSPFKK 285


>ref|NP_194280.1| arginine/serine-rich splicing factor 35 [Arabidopsis thaliana]
            gi|334186916|ref|NP_001190837.1| arginine/serine-rich
            splicing factor 35 [Arabidopsis thaliana]
            gi|4033468|sp|P92965.2|RSP40_ARATH RecName:
            Full=Arginine/serine-rich-splicing factor RSP40
            gi|2582641|emb|CAA67800.1| splicing factor [Arabidopsis
            thaliana] gi|2980800|emb|CAA18176.1| splicing factor
            At-SRp40 [Arabidopsis thaliana]
            gi|332659667|gb|AEE85067.1| arginine/serine-rich splicing
            factor 35 [Arabidopsis thaliana]
            gi|332659670|gb|AEE85070.1| arginine/serine-rich splicing
            factor 35 [Arabidopsis thaliana]
          Length = 350

 Score =  232 bits (592), Expect = 2e-58
 Identities = 136/257 (52%), Positives = 168/257 (65%), Gaps = 6/257 (2%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 1065
            G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK    G +R+ GG +RSS S++P
Sbjct: 36   GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRP 95

Query: 1064 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 885
            +KTLFVINFD  +TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E Q++AT+ALD ++ SK
Sbjct: 96   SKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSK 155

Query: 884  ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 705
            ++DKVI+VEYA                               Y R   RGSPDYGR  SP
Sbjct: 156  LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 212

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 537
            V A R+ER SPDY R  SP   +++ R SPEY    R  DSP   ER   S   Y R  S
Sbjct: 213  VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERV-ASPTKYSR--S 269

Query: 536  PNNERER-SLSRSPVRQ 489
            PNN+RER S + SP ++
Sbjct: 270  PNNKRERMSPNHSPFKK 286


>ref|NP_001078447.1| arginine/serine-rich splicing factor 35 [Arabidopsis thaliana]
            gi|222423494|dbj|BAH19717.1| AT4G25500 [Arabidopsis
            thaliana] gi|332659669|gb|AEE85069.1|
            arginine/serine-rich splicing factor 35 [Arabidopsis
            thaliana]
          Length = 317

 Score =  232 bits (592), Expect = 2e-58
 Identities = 136/257 (52%), Positives = 168/257 (65%), Gaps = 6/257 (2%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 1065
            G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK    G +R+ GG +RSS S++P
Sbjct: 3    GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRP 62

Query: 1064 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 885
            +KTLFVINFD  +TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E Q++AT+ALD ++ SK
Sbjct: 63   SKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSK 122

Query: 884  ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 705
            ++DKVI+VEYA                               Y R   RGSPDYGR  SP
Sbjct: 123  LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 179

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 537
            V A R+ER SPDY R  SP   +++ R SPEY    R  DSP   ER   S   Y R  S
Sbjct: 180  VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERV-ASPTKYSR--S 236

Query: 536  PNNERER-SLSRSPVRQ 489
            PNN+RER S + SP ++
Sbjct: 237  PNNKRERMSPNHSPFKK 253


>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
          Length = 478

 Score =  231 bits (590), Expect = 4e-58
 Identities = 131/272 (48%), Positives = 169/272 (62%), Gaps = 22/272 (8%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 1062
            G+AF+YMEDERDAE AI  LDRT FGR+ RRL VEWTK  +RG RR  G +RSS +L+P 
Sbjct: 36   GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQ-ERGIRRPSGSRRSSTNLRPA 94

Query: 1061 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 882
            KTLFVINFDP++TR RD+ERHF+PYGK+LN+RIRRNFAF+Q+E+Q++AT+AL+ T++SK+
Sbjct: 95   KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 154

Query: 881  LDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYG-RRATRGSPDYGRAPSP 705
            +D+VI+VEYA                              +    R  RGSPDYGR  SP
Sbjct: 155  MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSP 214

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSS------------ 561
              A R+ER SPDY R PSP   RR +R+ P++ R+ SP++  R R S             
Sbjct: 215  -SAYRRERASPDYGRDPSP-SPRRRDRAMPDHGRSRSPSHHRRERTSHDSARGPSRSPYR 272

Query: 560  --------ADYGRASSPN-NERERSLSRSPVR 492
                     DYGR  SP+   RE+ +   P R
Sbjct: 273  SERSDRAIPDYGRGRSPSPGRREKIMPDYPDR 304


>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
            vinifera]
          Length = 480

 Score =  231 bits (589), Expect = 5e-58
 Identities = 131/272 (48%), Positives = 169/272 (62%), Gaps = 22/272 (8%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 1062
            G+AF+YMEDERDAE AI  LDRT FGR+ RRL VEWTK  +RG RR  G +RSS +L+P 
Sbjct: 38   GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQ-ERGIRRPSGSRRSSTNLRPA 96

Query: 1061 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 882
            KTLFVINFDP++TR RD+ERHF+PYGK+LN+RIRRNFAF+Q+E+Q++AT+AL+ T++SK+
Sbjct: 97   KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 156

Query: 881  LDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYG-RRATRGSPDYGRAPSP 705
            +D+VI+VEYA                              +    R  RGSPDYGR  SP
Sbjct: 157  MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSP 216

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSS------------ 561
              A R+ER SPDY R PSP   RR +R+ P++ R+ SP++  R R S             
Sbjct: 217  -SAYRRERASPDYGRDPSP-SPRRRDRAIPDHGRSRSPSHHRRERTSHDSARGPSRSPYR 274

Query: 560  --------ADYGRASSPN-NERERSLSRSPVR 492
                     DYGR  SP+   RE+ +   P R
Sbjct: 275  SERSDRAIPDYGRGRSPSPGRREKIMPDYPDR 306


>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
          Length = 479

 Score =  231 bits (589), Expect = 5e-58
 Identities = 131/272 (48%), Positives = 169/272 (62%), Gaps = 22/272 (8%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 1062
            G+AF+YMEDERDAE AI  LDRT FGR+ RRL VEWTK  +RG RR  G +RSS +L+P 
Sbjct: 36   GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQ-ERGIRRPSGSRRSSTNLRPA 94

Query: 1061 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 882
            KTLFVINFDP++TR RD+ERHF+PYGK+LN+RIRRNFAF+Q+E+Q++AT+AL+ T++SK+
Sbjct: 95   KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 154

Query: 881  LDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYG-RRATRGSPDYGRAPSP 705
            +D+VI+VEYA                              +    R  RGSPDYGR  SP
Sbjct: 155  MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSP 214

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSS------------ 561
              A R+ER SPDY R PSP   RR +R+ P++ R+ SP++  R R S             
Sbjct: 215  -SAYRRERASPDYGRDPSP-SPRRRDRAIPDHGRSRSPSHHRRERTSHDSARGPSRSPYR 272

Query: 560  --------ADYGRASSPN-NERERSLSRSPVR 492
                     DYGR  SP+   RE+ +   P R
Sbjct: 273  SERSDRAIPDYGRGRSPSPGRREKIMPDYPDR 304


>dbj|BAH20075.1| AT4G25500 [Arabidopsis thaliana]
          Length = 317

 Score =  231 bits (588), Expect = 7e-58
 Identities = 135/257 (52%), Positives = 168/257 (65%), Gaps = 6/257 (2%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 1065
            G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK    G +R+ GG +RSS S++P
Sbjct: 3    GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRP 62

Query: 1064 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 885
            +KTLFVINFD  +TR RD+E+HFEPYGK++NVRIRRNFAF+Q++ Q++AT+ALD ++ SK
Sbjct: 63   SKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYKAQEDATRALDASNNSK 122

Query: 884  ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 705
            ++DKVI+VEYA                               Y R   RGSPDYGR  SP
Sbjct: 123  LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 179

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 537
            V A R+ER SPDY R  SP   +++ R SPEY    R  DSP   ER   S   Y R  S
Sbjct: 180  VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERV-ASPTKYSR--S 236

Query: 536  PNNERER-SLSRSPVRQ 489
            PNN+RER S + SP ++
Sbjct: 237  PNNKRERMSPNHSPFKK 253


>gb|AAB18813.1| splicing factor At-SRp40 [Arabidopsis thaliana]
          Length = 350

 Score =  230 bits (586), Expect = 1e-57
 Identities = 135/257 (52%), Positives = 167/257 (64%), Gaps = 6/257 (2%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 1065
            G+AFVYMEDERDAE AI +LDR EFGR+ R L VEWTK    G +R+ GG +RSS S++P
Sbjct: 36   GFAFVYMEDERDAEDAIRALDRFEFGRRGRTLRVEWTKSERGGDKRSGGGSRRSSSSMRP 95

Query: 1064 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 885
            +KTLFVINFD  +TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E Q++AT+ALD ++ SK
Sbjct: 96   SKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSK 155

Query: 884  ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 705
            ++DKVI+VEYA                               Y R   RGSPDYGR  SP
Sbjct: 156  LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPTPYKRE--RGSPDYGRGASP 212

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 537
            V A R+ER SPDY R  SP   +++ R SPEY    R  DSP   ER   S   Y R  S
Sbjct: 213  VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERV-ASPTKYSR--S 269

Query: 536  PNNERER-SLSRSPVRQ 489
            PNN+RER S + SP ++
Sbjct: 270  PNNKRERMSPNHSPFKK 286


>emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis thaliana]
          Length = 349

 Score =  230 bits (586), Expect = 1e-57
 Identities = 135/257 (52%), Positives = 167/257 (64%), Gaps = 6/257 (2%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 1065
            G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK    G +R+ GG +RSS S++P
Sbjct: 35   GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKGERGGDKRSGGGSRRSSSSMRP 94

Query: 1064 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 885
            +KTLFVINFD  +TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E Q++AT+ALD ++  K
Sbjct: 95   SKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNRK 154

Query: 884  ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 705
            ++DKVI+VEYA                               Y R   RGSPDYGR  SP
Sbjct: 155  LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 211

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 537
            V A R+ER SPDY R  SP   +++ R SPEY    R  DSP   ER   S   Y R  S
Sbjct: 212  VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERV-ASPTKYSR--S 268

Query: 536  PNNERER-SLSRSPVRQ 489
            PNN+RER S + SP ++
Sbjct: 269  PNNKRERMSPNHSPFKK 285


>gb|EXC15932.1| Arginine/serine-rich-splicing factor RSP40 [Morus notabilis]
          Length = 614

 Score =  227 bits (579), Expect = 8e-57
 Identities = 125/245 (51%), Positives = 163/245 (66%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 1062
            G+AF+YMED+RDAE AI +LDR EFGR+ RRL VEWTK  +RG RR  G K+SS + +P+
Sbjct: 212  GFAFIYMEDDRDAEDAIRALDRREFGRKGRRLRVEWTKQ-ERGIRRPGGSKKSSANNRPS 270

Query: 1061 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 882
            KTLFVINFDP+ TR +D+ERHF+ YGK+++VRIRRNFAFVQ+E+Q++ATKAL+ T++SK+
Sbjct: 271  KTLFVINFDPYHTRTKDLERHFDQYGKIVSVRIRRNFAFVQYESQEDATKALEATNMSKL 330

Query: 881  LDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSPV 702
            +D+VI+VEYA                                  R  RGSPDYGR  SP 
Sbjct: 331  MDRVISVEYAVRDDDERKDGYSPDRSRDRSLERGRDRRRSPSPYRRERGSPDYGRGSSP- 389

Query: 701  YARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRASSPNNER 522
             A R+ER SPDY R  SP   ++ ER+SP+Y R  SP+   R R + AD+GR SS +  R
Sbjct: 390  GAYRRERGSPDYGRGRSPSPYKK-ERASPDYGRGRSPSPYRRER-AGADHGRGSSRSPNR 447

Query: 521  ERSLS 507
               +S
Sbjct: 448  REKVS 452


>ref|XP_004308115.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Fragaria
            vesca subsp. vesca]
          Length = 376

 Score =  227 bits (578), Expect = 1e-56
 Identities = 129/260 (49%), Positives = 167/260 (64%), Gaps = 12/260 (4%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 1062
            G+AF+YM+DERDA+ AI  LDR EFGR+ RRL VEW+KH +RGSRR    +RSS   +P+
Sbjct: 36   GFAFIYMDDERDADYAIRGLDRREFGRKGRRLRVEWSKH-ERGSRRPGASRRSSTITRPS 94

Query: 1061 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 882
            KTLFVINFDP+ TR +D+ERHF+PYGK+++VRIRRNFAFVQ+E+Q++AT+AL+ T++SK+
Sbjct: 95   KTLFVINFDPYHTRTKDLERHFDPYGKIISVRIRRNFAFVQYESQEDATRALEATNMSKL 154

Query: 881  LDKVITVEYA-QXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 705
            +D+VI+VEYA +                                 +  RGSPDYGR PSP
Sbjct: 155  MDRVISVEYAVRDDDERRDGYSPDRRSRERSLERGRDRRRSPSPYKRERGSPDYGRGPSP 214

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRASSPN-- 531
               RR ER SPDY R  SP    R ER+SP+Y R  SP+   R R   +D+GR SS +  
Sbjct: 215  GPYRR-ERGSPDYGRGTSPY---RRERASPDYARGHSPSPYRRER---SDHGRVSSRSPR 267

Query: 530  ---------NERERSLSRSP 498
                      +R RS SRSP
Sbjct: 268  KERVSADHGRDRSRSRSRSP 287


>gb|EMJ19230.1| hypothetical protein PRUPE_ppa005993mg [Prunus persica]
          Length = 433

 Score =  227 bits (578), Expect = 1e-56
 Identities = 126/245 (51%), Positives = 163/245 (66%), Gaps = 3/245 (1%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTK--HPDRGSRRAEGGKRSSGSLK 1068
            G+AF+YMEDERDAE AI  LDR EFGR+ RRL VEWTK  + +RG+RR    +RSS + +
Sbjct: 107  GFAFIYMEDERDAEYAIRGLDRKEFGRKGRRLRVEWTKVANHERGTRRPGASRRSSTNTR 166

Query: 1067 PTKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLS 888
            P+KTLFVINFDP+ TR +D+ERHF+PYGK+++VRIRRNFAFVQ+E+Q++AT+AL+ T++S
Sbjct: 167  PSKTLFVINFDPYHTRTKDLERHFDPYGKIVSVRIRRNFAFVQYESQEDATRALEATNMS 226

Query: 887  KILDKVITVEYA-QXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAP 711
            K++D+VI+VEYA +                                 +  RGSPDYGR P
Sbjct: 227  KLMDRVISVEYAVRDDDERRDGFSPDRRSRDRSLDRGRDRRRSPSPYKRERGSPDYGRGP 286

Query: 710  SPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRASSPN 531
            SP   RR ER SPDY R PSP    R ER SP+Y R  SP+   R R   +D+GR SS +
Sbjct: 287  SPGPYRR-ERGSPDYGRGPSPY---RRERVSPDYGRGRSPSPYRRER---SDHGRVSSRS 339

Query: 530  NERER 516
              +ER
Sbjct: 340  PRKER 344


>ref|XP_004251258.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Solanum
            lycopersicum]
          Length = 354

 Score =  226 bits (576), Expect = 2e-56
 Identities = 132/253 (52%), Positives = 164/253 (64%), Gaps = 6/253 (2%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 1062
            G+AFVYM+DERDAE AI  LDR EFGR+ RRL +EW+K  +R  RR E  ++SS S+KP+
Sbjct: 36   GFAFVYMDDERDAEDAIRGLDRIEFGRKGRRLRIEWSKE-ERNGRRPETSRKSSSSVKPS 94

Query: 1061 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 882
            KTLFVINFDP+STR RDIERHF+PYGK+LN+RIRRNFAFVQ+ETQ++AT+ALD T++SK+
Sbjct: 95   KTLFVINFDPYSTRSRDIERHFDPYGKILNIRIRRNFAFVQYETQEDATRALDATNMSKL 154

Query: 881  LDKVITVEYA--QXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYG---- 720
            +D+VITVEYA                                 YGR   RGSPDYG    
Sbjct: 155  MDQVITVEYANKDDDDRRNGFSPDRNRDRGLKRGYDRGRSRSPYGRE--RGSPDYGRGRA 212

Query: 719  RAPSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRAS 540
            R+PSP+   RQ R SPDY R PSP  + R ER S EY    SP      ++ + D+G   
Sbjct: 213  RSPSPI---RQGRSSPDYGRRPSPNPNHR-ERDS-EYGSGRSP---NMRKERNPDHGNGH 264

Query: 539  SPNNERERSLSRS 501
            SPN  R R+ S +
Sbjct: 265  SPNPRRLRAGSEN 277


>ref|XP_004149584.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Cucumis
            sativus] gi|449528505|ref|XP_004171244.1| PREDICTED:
            arginine/serine-rich-splicing factor RSP40-like [Cucumis
            sativus]
          Length = 367

 Score =  226 bits (576), Expect = 2e-56
 Identities = 136/272 (50%), Positives = 172/272 (63%), Gaps = 21/272 (7%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG--------KR 1086
            G+AF+YMEDER+AE AIH+LDR EFGR+ RRL VEWTK  +RG RR  GG        +R
Sbjct: 36   GFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQ-ERGIRRPSGGGGGSGGGSRR 94

Query: 1085 SSGSLKPTKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKAL 906
            SS + +P+KTLFVINFDP+ TR+RD+ERHF+PYGK+LNVRIRRNFAFVQ+E Q++AT+AL
Sbjct: 95   SSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRAL 154

Query: 905  DNTHLSKILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPD 726
            + T++SK++D+VI+VEYA                             P    R  RGSPD
Sbjct: 155  EVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSP---YRRERGSPD 211

Query: 725  YGRAPSPVYARRQERRSPDY--TRAPSPLYSRRAERSSPEYRRADSPAYE--ERPRKSSA 558
            YG   S    RRQ R SPDY   R+PSP Y R  ER SP+Y R  SP +    R R+ S+
Sbjct: 212  YGNGISRSPYRRQ-RASPDYGSRRSPSP-YQRERERGSPDYSRGRSPKHSPYRRERERSS 269

Query: 557  DYGRASS---------PNNERERSLSRSPVRQ 489
            D+ RA S         PN++R  + S SP R+
Sbjct: 270  DHIRAPSHSPPHQRERPNDDRIPNRSPSPYRR 301


>ref|XP_006857904.1| hypothetical protein AMTR_s00069p00132220 [Amborella trichopoda]
            gi|548862006|gb|ERN19371.1| hypothetical protein
            AMTR_s00069p00132220 [Amborella trichopoda]
          Length = 252

 Score =  225 bits (573), Expect = 4e-56
 Identities = 127/221 (57%), Positives = 152/221 (68%), Gaps = 1/221 (0%)
 Frame = -3

Query: 1241 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 1062
            G+AF+YMEDERDAE AI  LDR EFGR  RRL VEWTK  +RG RR  G +RS+ +L+PT
Sbjct: 36   GFAFIYMEDERDAEDAIRGLDRMEFGRSGRRLRVEWTKQ-ERGIRRPPGARRSN-NLRPT 93

Query: 1061 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 882
            KTLFVINFDP +TRVRD+E+HFEPYGK+LN+RIRRNFAF+QFE Q++ATKAL+ TH+SKI
Sbjct: 94   KTLFVINFDPINTRVRDLEKHFEPYGKVLNIRIRRNFAFIQFENQEDATKALEATHMSKI 153

Query: 881  LDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGR-RATRGSPDYGRAPSP 705
            +D+VI+VEYA                                GR R+ R S ++GR+PSP
Sbjct: 154  MDRVISVEYA---------------VRDDDERRNGGYSPARRGRDRSPRKSREHGRSPSP 198

Query: 704  VYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYE 582
             Y R  ER SPDY R PSP YSR   R SP   RA+SP YE
Sbjct: 199  -YGR--ERGSPDYGRGPSP-YSRPDARGSPNSGRAESPVYE 235