BLASTX nr result

ID: Ephedra28_contig00002692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002692
         (704 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18096.1| unknown [Picea sitchensis]                              57   7e-06

>gb|ABR18096.1| unknown [Picea sitchensis]
          Length = 966

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 63/251 (25%), Positives = 101/251 (40%), Gaps = 17/251 (6%)
 Frame = -1

Query: 704  ISLNLSLCTKINKVPNGFFTQLFSLKVLNXXXXXXXXXXXXIGNXXXXXXXXXXDCYSID 525
            +SL LS    + +VP GF + L SL+VL+            +G            C S+ 
Sbjct: 552  VSLVLSCNENLTEVPEGFLSNLASLRVLDLSKTSISSLPTSLGQLGQLELLDLSGCTSLK 611

Query: 524  RLPDELCTLPNLRVLDIWDS-GIKTLPSMIGNLTTLK--EFLMCDIEHVPKXXXXXXXXX 354
             LP+ +C L  L+ LD+     +++LPSMIG L  LK    L C+               
Sbjct: 612  DLPESICNLHGLQFLDLGHCYELQSLPSMIGQLKNLKHLSLLFCNCLMAIPHDIFQLTSL 671

Query: 353  XXXXXXSQNKGPSEAELFDLKDLTGFRKLQCLWLHCIDIQCHESKEIDCECWSQMKSLFF 174
                   Q+   +E    DL  L+  R+L       + I+  +SK      W  M+ L  
Sbjct: 672  NQLILPRQSSCYAE----DLTKLSNLRELD------VTIK-PQSKVGTMGPWLDMRDLSL 720

Query: 173  SVSEETVKIPE-----VFSKIIENMLQLEDLELLN---------CGSFLQPRNASTVQLL 36
            + + +   I +     + S+ I++M +LE L L+N          G F   R+       
Sbjct: 721  TYNNDADTIRDDADENILSESIKDMKKLESLYLMNYQGVNLPNSIGEFQNLRSLCLTACD 780

Query: 35   TVRKIPKVPCL 3
             +++ PK P L
Sbjct: 781  QLKEFPKFPTL 791


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