BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002569
         (667 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65058.1| hypothetical protein VITISV_008902 [Vitis vinifera]   141   6e-56
emb|CAN67988.1| hypothetical protein VITISV_017211 [Vitis vinifera]   141   1e-55
emb|CAN71245.1| hypothetical protein VITISV_011091 [Vitis vinifera]   137   2e-55
emb|CAN64305.1| hypothetical protein VITISV_026331 [Vitis vinifera]   137   3e-54
emb|CAN72461.1| hypothetical protein VITISV_025872 [Vitis vinifera]   135   5e-54
emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera]   136   5e-54
emb|CAN67730.1| hypothetical protein VITISV_044473 [Vitis vinifera]   134   1e-53
gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group]     136   2e-53
gb|ABF96984.1| retrotransposon protein, putative, Ty1-copia subc...   136   2e-53
emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group]          135   2e-53
emb|CAN79779.1| hypothetical protein VITISV_013617 [Vitis vinifera]   138   2e-53
gb|AAS98452.2| putative polyprotein [Oryza sativa Japonica Group]     133   2e-53
gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group]     134   5e-53
gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subc...   132   6e-53
gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]     132   6e-53
emb|CAD39343.2| OSJNBa0094O15.12 [Oryza sativa Japonica Group]        132   1e-52
gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]         135   1e-52
gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Grou...   134   1e-52
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...   137   2e-52
gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]                129   2e-52

>emb|CAN65058.1| hypothetical protein VITISV_008902 [Vitis vinifera]
          Length = 857

 Score =  141 bits (356), Expect(2) = 6e-56
 Identities = 69/136 (50%), Positives = 95/136 (69%)
 Frame = +1

Query: 7   VCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDDIL 186
           V  LKKALYGLKQAPRAWY RL  FL  KGF  G  D T +   ++  +L+V++YVDDI+
Sbjct: 89  VFRLKKALYGLKQAPRAWYERLSKFLLKKGFKMGKIDTTLFIKTKDNGMLLVQIYVDDII 148

Query: 187 FGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKFGM 366
           FGAT+ SLC +FS  M SEFEMSM   L  FLG+QI+Q++ G  ++Q  Y++++L++F M
Sbjct: 149 FGATNVSLCEEFSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIRDLLKRFNM 208

Query: 367 LQCKPHSTPMAARLVL 414
            + K   TPM++ + L
Sbjct: 209 KEAKTMKTPMSSSIKL 224



 Score =  102 bits (255), Expect(2) = 6e-56
 Identities = 46/79 (58%), Positives = 61/79 (77%)
 Frame = +3

Query: 429 VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
           ++ T YR MIG L+Y TASRP+I ++V L +RFQ  PK+  L AVKRI+RYLKGT+D+G+
Sbjct: 233 INSTMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESPLSAVKRILRYLKGTMDIGL 292

Query: 609 WYGRGKGINLIGFSDADWA 665
           WY +G    LIG+SDAD+A
Sbjct: 293 WYPKGDNFELIGYSDADFA 311


>emb|CAN67988.1| hypothetical protein VITISV_017211 [Vitis vinifera]
          Length = 1119

 Score =  141 bits (355), Expect(2) = 1e-55
 Identities = 67/140 (47%), Positives = 97/140 (69%)
 Frame = +1

Query: 1    SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
            ++V  LKKALYGLKQAPRAWY RL  FL  +GF  G  D T +   +   +L+V++YVDD
Sbjct: 621  NHVFKLKKALYGLKQAPRAWYERLSKFLFKRGFKMGKIDTTLFIKTKESDMLLVQIYVDD 680

Query: 181  ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
            I+FGAT+ SLC +FS  M +EFEMSM   L  F+G+QI+Q++ G  ++Q  Y++++L++F
Sbjct: 681  IIFGATNVSLCEEFSKCMHNEFEMSMMGELNFFIGLQIKQLKEGTFINQAKYIRDLLKRF 740

Query: 361  GMLQCKPHSTPMAARLVLHK 420
             M + K   TPM++ + L K
Sbjct: 741  NMXEAKTMKTPMSSSIKLDK 760



 Score =  102 bits (254), Expect(2) = 1e-55
 Identities = 45/79 (56%), Positives = 59/79 (74%)
 Frame = +3

Query: 429  VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
            +D T YR MIG L+Y TAS P+I ++V L +RFQ  PK+ HL  VK I+RYLKGT+D+G+
Sbjct: 767  IDSTMYRGMIGSLLYLTASXPDIMYSVCLCARFQSCPKESHLSVVKXILRYLKGTMDIGL 826

Query: 609  WYGRGKGINLIGFSDADWA 665
            WY +G    LIG+SDAD+A
Sbjct: 827  WYPKGDNFELIGYSDADFA 845


>emb|CAN71245.1| hypothetical protein VITISV_011091 [Vitis vinifera]
          Length = 550

 Score =  137 bits (346), Expect(2) = 2e-55
 Identities = 66/140 (47%), Positives = 95/140 (67%)
 Frame = +1

Query: 1   SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
           ++V  LKK LYGLKQ+PRAWY RL  FL  KGF  G  D T +   +   +L+V++YVDD
Sbjct: 310 NHVFKLKKTLYGLKQSPRAWYERLSKFLLKKGFKMGKIDTTLFIKTKENDMLLVQIYVDD 369

Query: 181 ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
           I+FGAT+ SLC +FS  M SEFEMSM   L  FLG++I+Q++ G  ++Q  Y++++L++F
Sbjct: 370 IIFGATNVSLCEEFSKCMHSEFEMSMMGELNFFLGLKIKQLKEGTFINQAKYIRDILKRF 429

Query: 361 GMLQCKPHSTPMAARLVLHK 420
            M + K   TPM++ +   K
Sbjct: 430 NMEEAKTMKTPMSSSIKFDK 449



 Score =  105 bits (261), Expect(2) = 2e-55
 Identities = 46/79 (58%), Positives = 62/79 (78%)
 Frame = +3

Query: 429 VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
           V+ T Y+ MIG L+Y TASRP+I ++V L +RFQ  PK+ HL A+K+I+RYLKGT+D+G+
Sbjct: 456 VNSTMYKGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESHLSAIKQILRYLKGTMDIGL 515

Query: 609 WYGRGKGINLIGFSDADWA 665
           WY +G    LIGFSDAD+A
Sbjct: 516 WYPKGDNFELIGFSDADFA 534


>emb|CAN64305.1| hypothetical protein VITISV_026331 [Vitis vinifera]
          Length = 763

 Score =  137 bits (345), Expect(2) = 3e-54
 Identities = 67/138 (48%), Positives = 96/138 (69%)
 Frame = +1

Query: 1   SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
           ++V  LKKALYGLKQAPRAWY RL++FL  KGF  G  D T +   +   +L+V++YVDD
Sbjct: 161 NHVFRLKKALYGLKQAPRAWYERLNNFLLKKGFKMGNIDTTLFIKTKENDMLLVQIYVDD 220

Query: 181 ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
           I+F AT+ SLC  FS  M SEFEMSM   L  FLG+QI+Q++ G  ++Q  Y++++L++F
Sbjct: 221 IVFRATNVSLCEKFSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIRDLLKRF 280

Query: 361 GMLQCKPHSTPMAARLVL 414
            M + +   TPM++ + L
Sbjct: 281 NMEEAETMKTPMSSSIKL 298



 Score =  101 bits (251), Expect(2) = 3e-54
 Identities = 46/79 (58%), Positives = 60/79 (75%)
 Frame = +3

Query: 429 VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
           V+ T YR MIG L+Y TASRP+I ++V L  RFQ   K+ HL A+KRI+RYLKGT+D+G+
Sbjct: 307 VNSTMYRGMIGSLLYLTASRPDIMYSVCLCVRFQFCSKESHLSAIKRILRYLKGTMDIGL 366

Query: 609 WYGRGKGINLIGFSDADWA 665
           WY +G    LIG+SDAD+A
Sbjct: 367 WYPKGDNFELIGYSDADFA 385


>emb|CAN72461.1| hypothetical protein VITISV_025872 [Vitis vinifera]
          Length = 887

 Score =  135 bits (340), Expect(2) = 5e-54
 Identities = 65/132 (49%), Positives = 92/132 (69%)
 Frame = +1

Query: 19  KKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDDILFGAT 198
           ++ALYGLKQAPRAWY RL  FL  KGF  G  D T +   ++  +L+V++YVDDI+FGAT
Sbjct: 525 EEALYGLKQAPRAWYERLSKFLLKKGFKMGKIDTTLFIKTKDNDMLLVQIYVDDIIFGAT 584

Query: 199 DESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKFGMLQCK 378
           + SLC  FS  M SEFEMSM   L  FLG+QI+Q++ G  ++Q  Y++++L++F M + K
Sbjct: 585 NVSLCEGFSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIRDLLKRFNMEEAK 644

Query: 379 PHSTPMAARLVL 414
              TPM++ + L
Sbjct: 645 TMKTPMSSSIKL 656



 Score =  102 bits (255), Expect(2) = 5e-54
 Identities = 46/78 (58%), Positives = 59/78 (75%)
 Frame = +3

Query: 429 VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
           V+ T YR MIG L+Y T SRP+I ++V L +RFQ  PK  HL AVKRI+RYLKGT+D+G+
Sbjct: 665 VNSTMYRGMIGSLLYLTTSRPDIMYSVCLCARFQSCPKKSHLSAVKRILRYLKGTMDIGL 724

Query: 609 WYGRGKGINLIGFSDADW 662
           WY +G    LIG+SDAD+
Sbjct: 725 WYPKGDNFELIGYSDADF 742


>emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera]
          Length = 455

 Score =  136 bits (343), Expect(2) = 5e-54
 Identities = 65/138 (47%), Positives = 94/138 (68%)
 Frame = +1

Query: 1   SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
           ++V  LKK LYGLKQA RAWY RL  F+  KGF  G  D T +   +   +L+V++YVDD
Sbjct: 87  NHVFRLKKTLYGLKQAXRAWYERLSKFJLKKGFKMGKIDXTLFIKTKXNDMLLVQIYVDD 146

Query: 181 ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
           I+FGAT+ SLC +FS  M SEFEMSM   L  F+G+QI+Q++ G  ++Q  Y++++L++F
Sbjct: 147 IIFGATNVSLCEEFSKCMHSEFEMSMMGELNFFIGLQIKQLKEGTFINQAKYIRDLLKRF 206

Query: 361 GMLQCKPHSTPMAARLVL 414
            M + K   TPM++ + L
Sbjct: 207 NMEEAKTMKTPMSSSIKL 224



 Score =  101 bits (252), Expect(2) = 5e-54
 Identities = 44/79 (55%), Positives = 60/79 (75%)
 Frame = +3

Query: 429 VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
           ++ T YR MIG L+Y TASRP+I +++ L +RFQ  PK+ HL AVKRI+RYLKG +D+G+
Sbjct: 233 INSTMYRGMIGSLLYLTASRPDIMYSICLCARFQSCPKESHLSAVKRILRYLKGIMDIGL 292

Query: 609 WYGRGKGINLIGFSDADWA 665
           WY +G    LIG+ DAD+A
Sbjct: 293 WYPKGDNFELIGYLDADFA 311


>emb|CAN67730.1| hypothetical protein VITISV_044473 [Vitis vinifera]
          Length = 669

 Score =  134 bits (338), Expect(2) = 1e-53
 Identities = 67/140 (47%), Positives = 95/140 (67%)
 Frame = +1

Query: 1   SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
           ++V  LKK+LYGLKQAPRA Y RL  FL  +GF  G  D T +   +   +L+V++YVDD
Sbjct: 87  NHVFKLKKSLYGLKQAPRACYERLSKFLLKRGFKMGKIDTTLFIKTKENDMLLVQIYVDD 146

Query: 181 ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
           I+FGAT+ SLC +FS  M SEFEMSM   L  FLG+QI+Q++    ++Q  Y+K++L++F
Sbjct: 147 IIFGATNVSLCEEFSKCMHSEFEMSMMGELNFFLGLQIKQLKEETFINQAKYIKDLLKRF 206

Query: 361 GMLQCKPHSTPMAARLVLHK 420
            M + K   TPM++ + L K
Sbjct: 207 NMEEAKTMKTPMSSSIKLDK 226



 Score =  102 bits (253), Expect(2) = 1e-53
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = +3

Query: 429 VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
           +D T YR MIG L+Y TASRP I ++V L +RFQ   K+ HL AVKRI RYLKGT+D+G+
Sbjct: 233 IDSTMYRGMIGSLLYLTASRPNIMYSVCLCARFQSCLKESHLSAVKRIFRYLKGTIDIGL 292

Query: 609 WYGRGKGINLIGFSDADWA 665
           WY +     LIGFSDAD+A
Sbjct: 293 WYPKSDNFELIGFSDADFA 311


>gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1128

 Score =  136 bits (342), Expect(2) = 2e-53
 Identities = 66/133 (49%), Positives = 92/133 (69%)
 Frame = +1

Query: 1    SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
            ++V  L KALYGLKQAPRAWY RL  FL SK F  G  D T +  I  +   + ++YVDD
Sbjct: 754  NHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDD 813

Query: 181  ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
            I+FG+T+E  C +F + M+ EFEMSM + L  FLG+QI+Q+++G  +SQ  Y+K++L++F
Sbjct: 814  IIFGSTNEVFCKEFGDMMSREFEMSMIEELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRF 873

Query: 361  GMLQCKPHSTPMA 399
            G+   KP  TPMA
Sbjct: 874  GLEDAKPIKTPMA 886



 Score =  100 bits (248), Expect(2) = 2e-53
 Identities = 44/79 (55%), Positives = 61/79 (77%)
 Frame = +3

Query: 429  VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
            VD   YRSMIG L+Y TASRP+I F+V + +RFQ +PK+CHL+AVKRI+RYLK +  + +
Sbjct: 900  VDLKLYRSMIGSLLYLTASRPDIMFSVCMYARFQAAPKECHLVAVKRILRYLKHSSTISL 959

Query: 609  WYGRGKGINLIGFSDADWA 665
            WY +G    L+G+SD+D+A
Sbjct: 960  WYPKGAKFKLVGYSDSDYA 978


>gb|ABF96984.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1115

 Score =  136 bits (342), Expect(2) = 2e-53
 Identities = 66/133 (49%), Positives = 92/133 (69%)
 Frame = +1

Query: 1    SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
            ++V  L KALYGLKQAPRAWY RL  FL SK F  G  D T +  I  +   + ++YVDD
Sbjct: 741  NHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDD 800

Query: 181  ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
            I+FG+T+E  C +F + M+ EFEMSM + L  FLG+QI+Q+++G  +SQ  Y+K++L++F
Sbjct: 801  IIFGSTNEVFCKEFGDMMSREFEMSMIEELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRF 860

Query: 361  GMLQCKPHSTPMA 399
            G+   KP  TPMA
Sbjct: 861  GLEDAKPIKTPMA 873



 Score =  100 bits (248), Expect(2) = 2e-53
 Identities = 44/79 (55%), Positives = 61/79 (77%)
 Frame = +3

Query: 429  VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
            VD   YRSMIG L+Y TASRP+I F+V + +RFQ +PK+CHL+AVKRI+RYLK +  + +
Sbjct: 887  VDLKLYRSMIGSLLYLTASRPDIMFSVCMYARFQAAPKECHLVAVKRILRYLKHSSTISL 946

Query: 609  WYGRGKGINLIGFSDADWA 665
            WY +G    L+G+SD+D+A
Sbjct: 947  WYPKGAKFKLVGYSDSDYA 965


>emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group]
          Length = 711

 Score =  135 bits (341), Expect(2) = 2e-53
 Identities = 66/133 (49%), Positives = 92/133 (69%)
 Frame = +1

Query: 1   SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
           ++V  L KALYGLKQAPRAWY RL  FL SK F  G  D T +  I  +   + ++YVDD
Sbjct: 339 NHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDD 398

Query: 181 ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
           I+FG+T+E  C +F + M  EFEMSM + L  FLG+QI+Q+++G+ +SQ  Y+K++L++F
Sbjct: 399 IIFGSTNEVFCKEFDDMMFREFEMSMIEELSFFLGLQIKQLKDGMFVSQTKYIKDLLKRF 458

Query: 361 GMLQCKPHSTPMA 399
           G+   KP  TPMA
Sbjct: 459 GLEDAKPIKTPMA 471



 Score =  100 bits (249), Expect(2) = 2e-53
 Identities = 44/79 (55%), Positives = 61/79 (77%)
 Frame = +3

Query: 429 VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
           VD   YRSMIG L+Y T SRP+I F+V + +RFQ +PK+CHL+AVKRI+RYLK +  +G+
Sbjct: 485 VDLKLYRSMIGSLLYFTVSRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGL 544

Query: 609 WYGRGKGINLIGFSDADWA 665
           WY +G    L+G+SD+D+A
Sbjct: 545 WYPKGAKFKLVGYSDSDYA 563


>emb|CAN79779.1| hypothetical protein VITISV_013617 [Vitis vinifera]
          Length = 1190

 Score =  138 bits (348), Expect(2) = 2e-53
 Identities = 66/138 (47%), Positives = 95/138 (68%)
 Frame = +1

Query: 1   SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
           ++V  LK ALYGLKQAPR WY RL  FL  +GF  G ND T +   +   +L+V++YVDD
Sbjct: 495 NHVFKLKNALYGLKQAPRVWYERLSKFLLKRGFKMGKNDTTLFIKTKENGMLLVKIYVDD 554

Query: 181 ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
           I+FGAT+ SLC +FS  M S+FEMSM   L  FLG+QI+Q++ G  ++Q  Y++++L++F
Sbjct: 555 IIFGATNVSLCEEFSKCMHSKFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIRDLLKRF 614

Query: 361 GMLQCKPHSTPMAARLVL 414
            M + K   TPM++ + L
Sbjct: 615 NMEEAKTMKTPMSSSIKL 632



 Score = 97.4 bits (241), Expect(2) = 2e-53
 Identities = 45/79 (56%), Positives = 60/79 (75%)
 Frame = +3

Query: 429 VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
           V+ T YR +IG L+Y TASRP+I ++V L +RFQ  PK+ HL  VK ++RYLKGT+D+G+
Sbjct: 641 VNSTMYRGVIGSLLYLTASRPDIMYSVCLCARFQSCPKESHLSVVK-LIRYLKGTMDIGL 699

Query: 609 WYGRGKGINLIGFSDADWA 665
           WY +G    LIGFSDAD+A
Sbjct: 700 WYPKGDNFELIGFSDADFA 718


>gb|AAS98452.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1005

 Score =  133 bits (334), Expect(2) = 2e-53
 Identities = 65/133 (48%), Positives = 91/133 (68%)
 Frame = +1

Query: 1    SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
            ++V  L KALYGLKQAPRAWY RL  FL SK F  G  D T +  I  +   + ++YVDD
Sbjct: 633  NHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTIFTKIIGDDFFVCQIYVDD 692

Query: 181  ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
            I+FG+T+E  C +F + M+ EFEMSM + L  FLG+QI+Q+++G  +SQ  Y+K++L++F
Sbjct: 693  IIFGSTNEVFCKEFGDMMSREFEMSMIRELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRF 752

Query: 361  GMLQCKPHSTPMA 399
             +   KP  TPMA
Sbjct: 753  SLEDAKPIKTPMA 765



 Score =  102 bits (255), Expect(2) = 2e-53
 Identities = 45/79 (56%), Positives = 62/79 (78%)
 Frame = +3

Query: 429  VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
            VD   YRSMIG L+Y TASRP+I F+V + +RFQ +PK+CHL+AVKRI+RYLK +  +G+
Sbjct: 779  VDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSCTIGL 838

Query: 609  WYGRGKGINLIGFSDADWA 665
            WY +G    L+G+SD+D+A
Sbjct: 839  WYPKGAKFKLVGYSDSDYA 857


>gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1577

 Score =  134 bits (338), Expect(2) = 5e-53
 Identities = 66/133 (49%), Positives = 91/133 (68%)
 Frame = +1

Query: 1    SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
            ++V  L KALYGL+QAPRAWY RL  FL SK F  G  D T +  I  +   + ++YVDD
Sbjct: 1205 NHVYKLSKALYGLRQAPRAWYERLRDFLLSKDFKIGKVDITLFTKIIGDDFFVYQIYVDD 1264

Query: 181  ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
            I+FG+T+E  C +F + M+ EFEMSM   L  FLG+QI+Q++NG  +SQ  Y+K++L++F
Sbjct: 1265 IIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKNGTFVSQTKYIKDLLKRF 1324

Query: 361  GMLQCKPHSTPMA 399
            G+   KP  TPMA
Sbjct: 1325 GLEDAKPIKTPMA 1337



 Score =  100 bits (248), Expect(2) = 5e-53
 Identities = 44/79 (55%), Positives = 60/79 (75%)
 Frame = +3

Query: 429  VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
            VD   YRSMIG L+Y T SRP+I F+V + +RFQ +PK+CHL+AVKRI+RYLK +  +G+
Sbjct: 1351 VDLKLYRSMIGSLLYLTVSRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGL 1410

Query: 609  WYGRGKGINLIGFSDADWA 665
            WY +G    L+G+SD D+A
Sbjct: 1411 WYPKGAKFKLVGYSDPDYA 1429


>gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2112

 Score =  132 bits (331), Expect(2) = 6e-53
 Identities = 65/133 (48%), Positives = 91/133 (68%)
 Frame = +1

Query: 1    SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
            ++V  L KALYGLKQAPRAWY RL  FL SK F  G  + T +  I  +   + ++YVDD
Sbjct: 1212 NHVYKLSKALYGLKQAPRAWYERLRYFLLSKDFKIGKVNTTLFTKIIGDDFFVCQIYVDD 1271

Query: 181  ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
            I+FG+T+E  C +F + M+ EFEMSM   L  FLG+QI+Q+++G  +SQ  Y+K++L++F
Sbjct: 1272 IIFGSTNEVFCKEFGDMMSREFEMSMIGELNFFLGLQIKQLKDGTFVSQTKYIKDLLKRF 1331

Query: 361  GMLQCKPHSTPMA 399
            G+   KP  TPMA
Sbjct: 1332 GLEDAKPIKTPMA 1344



 Score =  102 bits (254), Expect(2) = 6e-53
 Identities = 45/79 (56%), Positives = 62/79 (78%)
 Frame = +3

Query: 429  VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
            VD   YRSMIG L+Y TASRP+I F+V + +RFQ +PK+CHL+AVKRI+RYLK +  +G+
Sbjct: 1358 VDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGL 1417

Query: 609  WYGRGKGINLIGFSDADWA 665
            WY +G    L+G+SD+D+A
Sbjct: 1418 WYPKGAKFKLVGYSDSDYA 1436


>gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1584

 Score =  132 bits (331), Expect(2) = 6e-53
 Identities = 65/133 (48%), Positives = 91/133 (68%)
 Frame = +1

Query: 1    SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
            ++V  L KALYGLKQAPRAWY RL  FL SK F  G  + T +  I  +   + ++YVDD
Sbjct: 1212 NHVYKLSKALYGLKQAPRAWYERLRYFLLSKDFKIGKVNTTLFTKIIGDDFFVCQIYVDD 1271

Query: 181  ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
            I+FG+T+E  C +F + M+ EFEMSM   L  FLG+QI+Q+++G  +SQ  Y+K++L++F
Sbjct: 1272 IIFGSTNEVFCKEFGDMMSREFEMSMIGELNFFLGLQIKQLKDGTFVSQTKYIKDLLKRF 1331

Query: 361  GMLQCKPHSTPMA 399
            G+   KP  TPMA
Sbjct: 1332 GLEDAKPIKTPMA 1344



 Score =  102 bits (254), Expect(2) = 6e-53
 Identities = 45/79 (56%), Positives = 62/79 (78%)
 Frame = +3

Query: 429  VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
            VD   YRSMIG L+Y TASRP+I F+V + +RFQ +PK+CHL+AVKRI+RYLK +  +G+
Sbjct: 1358 VDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGL 1417

Query: 609  WYGRGKGINLIGFSDADWA 665
            WY +G    L+G+SD+D+A
Sbjct: 1418 WYPKGAKFKLVGYSDSDYA 1436


>emb|CAD39343.2| OSJNBa0094O15.12 [Oryza sativa Japonica Group]
          Length = 1739

 Score =  132 bits (331), Expect(2) = 1e-52
 Identities = 64/133 (48%), Positives = 90/133 (67%)
 Frame = +1

Query: 1    SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
            ++V  L KALYGLKQAPRAWY RL  FL SK F  G  D T +  I  +   + ++YVDD
Sbjct: 997  NHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDD 1056

Query: 181  ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
             +FG+T++  C  F + M+ EFEMSM + L  FLG+QI+Q+++G  +SQ  Y+K++L++F
Sbjct: 1057 FIFGSTNKVFCKGFGDMMSREFEMSMIEELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRF 1116

Query: 361  GMLQCKPHSTPMA 399
            G+   KP  TPMA
Sbjct: 1117 GLEDAKPIKTPMA 1129



 Score =  101 bits (252), Expect(2) = 1e-52
 Identities = 45/79 (56%), Positives = 62/79 (78%)
 Frame = +3

Query: 429  VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
            VD   YRSMIG L+Y TASRP+I F+V + +RFQ +PK+CHL+AVKRI+RYLK +  +G+
Sbjct: 1143 VDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGL 1202

Query: 609  WYGRGKGINLIGFSDADWA 665
            WY +G    L+G+SD+D+A
Sbjct: 1203 WYLKGAKFKLVGYSDSDYA 1221


>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score =  135 bits (339), Expect(2) = 1e-52
 Identities = 66/138 (47%), Positives = 90/138 (65%)
 Frame = +1

Query: 4   YVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDDI 183
           YV  L KALYGLKQAPRAWY  L +FL   GF RG  D+T +       +++V++YVDDI
Sbjct: 31  YVYKLDKALYGLKQAPRAWYDTLSTFLLENGFSRGKIDNTLFLRKHKGNVILVQIYVDDI 90

Query: 184 LFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKFG 363
           +FGAT ES+C  FS  M S++E S+   L  FLG+Q++Q   GI ++Q  Y+K++L+KF 
Sbjct: 91  IFGATKESMCRKFSKLMQSKYETSLMGELTFFLGLQVKQSDKGIFINQSKYVKDLLKKFD 150

Query: 364 MLQCKPHSTPMAARLVLH 417
             +C    TPMA  L L+
Sbjct: 151 FNECSSMKTPMAPPLKLN 168



 Score = 98.6 bits (244), Expect(2) = 1e-52
 Identities = 45/79 (56%), Positives = 60/79 (75%)
 Frame = +3

Query: 429 VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
           V+ T YR MIG L+Y TASRP+I F+  L +R+Q +PK+ HL AVKRI RYLKGT +LG+
Sbjct: 176 VNVTSYRGMIGSLLYLTASRPDIMFSTCLCARYQANPKESHLAAVKRIFRYLKGTPNLGL 235

Query: 609 WYGRGKGINLIGFSDADWA 665
           WY +  G +L GFSD+++A
Sbjct: 236 WYPKDSGFDLTGFSDSNYA 254


>gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Group]
            gi|31431391|gb|AAP53179.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1299

 Score =  134 bits (336), Expect(2) = 1e-52
 Identities = 65/132 (49%), Positives = 89/132 (67%)
 Frame = +1

Query: 1    SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
            ++VC L K LYGLKQAPRAWY RL  FL SK F  G  D T +  I  +   + ++YVDD
Sbjct: 927  NHVCKLSKGLYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDD 986

Query: 181  ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
            I+FG+T+E  C +F + M+ EFEMSM   L  FL +QI+Q+++G  LSQ  Y+K++L++F
Sbjct: 987  IIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLRLQIKQLKDGTFLSQTKYIKDLLKRF 1046

Query: 361  GMLQCKPHSTPM 396
            G+   KP  TPM
Sbjct: 1047 GLEDAKPIKTPM 1058



 Score = 99.4 bits (246), Expect(2) = 1e-52
 Identities = 44/79 (55%), Positives = 61/79 (77%)
 Frame = +3

Query: 429  VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
            VD   Y SMIG L+Y TASRP+I F+V + +RFQ +PK+CHL+AVKRI+RYLK +  +G+
Sbjct: 1073 VDLKLYHSMIGSLLYLTASRPDIMFSVCMCARFQVAPKECHLVAVKRILRYLKHSSIIGL 1132

Query: 609  WYGRGKGINLIGFSDADWA 665
            WY +G    L+G+SD+D+A
Sbjct: 1133 WYPKGAKFKLVGYSDSDYA 1151


>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score =  137 bits (346), Expect(2) = 2e-52
 Identities = 71/139 (51%), Positives = 91/139 (65%)
 Frame = +1

Query: 4    YVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDDI 183
            +V  LKK+LYGLKQAPRAWY RL +FL    F RG  D T +     + ILIV++YVDDI
Sbjct: 1346 HVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDI 1405

Query: 184  LFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKFG 363
            +FG+T+ SLC +FS  M  EFEMSM   LK FLG+QI Q + G+++ Q  Y K +L+KF 
Sbjct: 1406 IFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFK 1465

Query: 364  MLQCKPHSTPMAARLVLHK 420
            +  CK  +TPM     L K
Sbjct: 1466 LEDCKVMNTPMHPTCTLSK 1484



 Score = 95.1 bits (235), Expect(2) = 2e-52
 Identities = 46/79 (58%), Positives = 57/79 (72%)
 Frame = +3

Query: 429  VDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLIAVKRIMRYLKGTLDLGI 608
            VD+  YR MIG L+Y TASRP+I F+V L +RFQ  P++ HL AVKRI RYLKGT +LG+
Sbjct: 1491 VDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGL 1550

Query: 609  WYGRGKGINLIGFSDADWA 665
             Y +     LIGF DAD+A
Sbjct: 1551 LYRKSLDYKLIGFCDADYA 1569


>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
          Length = 2319

 Score =  129 bits (324), Expect(2) = 2e-52
 Identities = 64/132 (48%), Positives = 87/132 (65%)
 Frame = +1

Query: 1    SYVCHLKKALYGLKQAPRAWYGRLDSFLKSKGFIRGINDDTQYYLIRNEQILIVEVYVDD 180
            ++V  L KALYGLKQAPRAWY  L  FL   GF  G  D T +    + ++ + ++YVDD
Sbjct: 1450 NHVYLLHKALYGLKQAPRAWYDCLKDFLIKNGFTIGKADSTLFTRKVDNELFVCQIYVDD 1509

Query: 181  ILFGATDESLCHDFSNWMTSEFEMSMFQILKHFLGMQIRQIQNGIHLSQGTYLKNMLQKF 360
            I+FG+T+E  C +FS  MT+ FEMSM   LK+FLG Q++Q++ G  L Q  Y ++ML+KF
Sbjct: 1510 IIFGSTNEKFCEEFSKVMTNRFEMSMMGELKYFLGFQVKQLKEGTFLCQTKYTQDMLKKF 1569

Query: 361  GMLQCKPHSTPM 396
            GM + K   TPM
Sbjct: 1570 GMEKAKHAKTPM 1581



 Score =  103 bits (256), Expect(2) = 2e-52
 Identities = 49/96 (51%), Positives = 69/96 (71%)
 Frame = +3

Query: 378  TTLYSNGCSIGSSQRXXVDKTQYRSMIGCLMYATASRPEITFAVSLVSRFQESPKDCHLI 557
            T + SNG    + +   VD+  YRSMIG L+Y  ASRP+I  +V + +RFQ +PKDCHL+
Sbjct: 1579 TPMPSNGHLDLNEEGKPVDQKLYRSMIGSLLYLCASRPDIMLSVCMCARFQANPKDCHLV 1638

Query: 558  AVKRIMRYLKGTLDLGIWYGRGKGINLIGFSDADWA 665
            AVKRI+RYL  T +LG+WY +G   +L+G+SD+D+A
Sbjct: 1639 AVKRILRYLVHTQNLGLWYPKGSFFDLLGYSDSDYA 1674