BLASTX nr result

ID: Ephedra28_contig00002560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002560
         (442 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN41029.1| unknown [Picea sitchensis]                              70   4e-10
gb|ABK25443.1| unknown [Picea sitchensis]                              69   6e-10
gb|AFG62202.1| hypothetical protein 2_7861_02, partial [Pinus ta...    67   3e-09
gb|AEW08378.1| hypothetical protein 2_7861_02, partial [Pinus ra...    65   7e-09
gb|AFG52609.1| hypothetical protein 0_14732_02, partial [Pinus t...    57   3e-06

>gb|ACN41029.1| unknown [Picea sitchensis]
          Length = 490

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = +3

Query: 150 MEGREGHVVMYPAFGMGHFLPMVELAKRLSGHHGLKVTFLVSDWAIKPQQLAEYKNLFAS 329
           ME  + HVV++P+ G+GH  P  ELAKRLS  HGL VTF+   W      +A +    AS
Sbjct: 1   MESPKLHVVIFPSAGIGHLTPFAELAKRLSECHGLSVTFMTCQWMFSSHLIAAFSERMAS 60

Query: 330 NSILDIDFVELP-KLEQDGNTEADFLKRVQENMMNSK 437
            S LDI FV+LP  +E +G        R+ + M  SK
Sbjct: 61  AS-LDITFVQLPADVEIEGAELMKIETRISKLMEKSK 96


>gb|ABK25443.1| unknown [Picea sitchensis]
          Length = 464

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 32/77 (41%), Positives = 49/77 (63%)
 Frame = +3

Query: 150 MEGREGHVVMYPAFGMGHFLPMVELAKRLSGHHGLKVTFLVSDWAIKPQQLAEYKNLFAS 329
           M+ R+ HV ++P+ GMGH +P  E AK L+  HG  +TF+ + + + P Q A  K+L +S
Sbjct: 1   MDARKPHVAIFPSVGMGHLIPFFEFAKLLASGHGFSITFITAKFMVTPSQTAYTKSLASS 60

Query: 330 NSILDIDFVELPKLEQD 380
              L I F+ELP++E D
Sbjct: 61  G--LSIRFIELPEVELD 75


>gb|AFG62202.1| hypothetical protein 2_7861_02, partial [Pinus taeda]
           gi|383159496|gb|AFG62203.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159497|gb|AFG62204.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159498|gb|AFG62205.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159499|gb|AFG62206.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159500|gb|AFG62207.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159501|gb|AFG62208.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159502|gb|AFG62209.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159503|gb|AFG62210.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159504|gb|AFG62211.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159505|gb|AFG62212.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159506|gb|AFG62213.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159507|gb|AFG62214.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
           gi|383159508|gb|AFG62215.1| hypothetical protein
           2_7861_02, partial [Pinus taeda]
          Length = 100

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = +3

Query: 168 HVVMYPAFGMGHFLPMVELAKRLSGHHGLKVTFLVSDWAIKPQQLAEYKNLFASNSILDI 347
           HV ++P  GMGH +P+ EL + LS  HGL +T +   W   P+ +  Y    AS+  LDI
Sbjct: 5   HVAIFPGAGMGHLIPVAELTRHLSATHGLSITLITCKWMFSPRLMDAYSKSMASSG-LDI 63

Query: 348 DFVELPKLEQDG 383
           +F++LP+ E +G
Sbjct: 64  NFIQLPEEEIEG 75


>gb|AEW08378.1| hypothetical protein 2_7861_02, partial [Pinus radiata]
          Length = 100

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/72 (38%), Positives = 44/72 (61%)
 Frame = +3

Query: 168 HVVMYPAFGMGHFLPMVELAKRLSGHHGLKVTFLVSDWAIKPQQLAEYKNLFASNSILDI 347
           HV ++P  GMGH +P+ EL + LS  HGL +T +   W   P+ +  Y    AS+  LDI
Sbjct: 5   HVAIFPGAGMGHLIPVAELTRHLSATHGLSITLITCKWMFSPRLMDAYSKSMASSG-LDI 63

Query: 348 DFVELPKLEQDG 383
           +F++LP+ + +G
Sbjct: 64  NFIQLPEEDIEG 75


>gb|AFG52609.1| hypothetical protein 0_14732_02, partial [Pinus taeda]
          Length = 111

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
 Frame = +3

Query: 141 EKIMEGREG----HVVMYPAFGMGHFLPMVELAKRLSGHHGLKVTFLVSDW-AIKPQQLA 305
           E +ME +E     HV ++P FG GH +P+++LAK+L+ +HG  V F  + W    P Q  
Sbjct: 1   ETLMEWQEQTQKPHVAIFPGFGSGHHIPLLQLAKQLTVYHGFSVIFFTAKWMGASPHQTP 60

Query: 306 EYKNLFASNSILDIDFVELPKLEQDGNTEA--DFLKRV 413
                  S+S   I F+ELP ++ +G+ +A   FL R+
Sbjct: 61  ------PSSSGGMIRFIELPDVQIEGDHDAGTSFLVRI 92


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