BLASTX nr result
ID: Ephedra28_contig00002490
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00002490
(710 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR18303.1| unknown [Picea sitchensis] 91 3e-16
tpg|DAA37419.1| TPA: hypothetical protein ZEAMMB73_349198 [Zea m... 91 5e-16
tpg|DAA37418.1| TPA: hypothetical protein ZEAMMB73_349198 [Zea m... 91 5e-16
ref|NP_001143878.1| uncharacterized protein LOC100276679 [Zea ma... 91 5e-16
ref|XP_006829471.1| hypothetical protein AMTR_s00074p00034110 [A... 90 6e-16
ref|XP_003575233.1| PREDICTED: uncharacterized protein LOC100842... 89 1e-15
ref|XP_002318012.1| hypothetical protein POPTR_0012s07620g [Popu... 89 1e-15
ref|XP_006344994.1| PREDICTED: mediator of RNA polymerase II tra... 88 3e-15
ref|XP_006344993.1| PREDICTED: mediator of RNA polymerase II tra... 88 3e-15
ref|XP_004508817.1| PREDICTED: lisH domain-containing protein C1... 88 3e-15
ref|XP_004975878.1| PREDICTED: uncharacterized protein LOC101752... 87 4e-15
ref|XP_002511474.1| conserved hypothetical protein [Ricinus comm... 87 4e-15
ref|XP_006354813.1| PREDICTED: mediator of RNA polymerase II tra... 87 5e-15
ref|XP_004236157.1| PREDICTED: uncharacterized protein LOC101261... 87 5e-15
ref|XP_004241517.1| PREDICTED: uncharacterized protein LOC101259... 87 5e-15
gb|ABI34275.1| hypothetical protein LES1_20t00015 [Solanum lycop... 87 5e-15
ref|XP_006647423.1| PREDICTED: uncharacterized protein LOC102707... 87 7e-15
ref|XP_006280776.1| hypothetical protein CARUB_v10026747mg [Caps... 87 7e-15
ref|XP_001758896.1| predicted protein [Physcomitrella patens] gi... 87 7e-15
ref|XP_006652382.1| PREDICTED: uncharacterized protein LOC102713... 86 1e-14
>gb|ABR18303.1| unknown [Picea sitchensis]
Length = 352
Score = 91.3 bits (225), Expect = 3e-16
Identities = 42/97 (43%), Positives = 52/97 (53%), Gaps = 19/97 (19%)
Frame = -2
Query: 538 KAWSPDDVCRPAFLPCLKPKNY-------------------SVDEGTQSCCPVCTEILDS 416
+AW PDDV RP LP L ++ S+ CP+C E LD+
Sbjct: 232 RAWRPDDVSRPVSLPSLSKQHSFPTQSGGLSTWRSTNRNEPSIPSAIPPSCPICYEDLDA 291
Query: 415 TDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQYA 305
TD F PC CGF LCLFC+ ++ QD RCPSCR+QYA
Sbjct: 292 TDSNFVPCACGFHLCLFCHKRIVEQDGRCPSCRNQYA 328
>tpg|DAA37419.1| TPA: hypothetical protein ZEAMMB73_349198 [Zea mays]
gi|414586849|tpg|DAA37420.1| TPA: hypothetical protein
ZEAMMB73_349198 [Zea mays]
Length = 178
Score = 90.5 bits (223), Expect = 5e-16
Identities = 45/103 (43%), Positives = 56/103 (54%), Gaps = 20/103 (19%)
Frame = -2
Query: 556 PEPKQYK--AWSPDDVCRPAFLPCLKPK--------NYSVDEGTQSC----------CPV 437
PEP Q K AW+PDD+ RP LP + + N D G + CP+
Sbjct: 38 PEPIQSKTRAWAPDDIFRPQSLPSISKQTSFPASIGNRWQDMGMSAAQQGILSLPLSCPI 97
Query: 436 CTEILDSTDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
C + LD TD F PC CGF +CLFC+N +LV+D RCP CR QY
Sbjct: 98 CCDDLDLTDSSFCPCPCGFHMCLFCHNRILVEDGRCPGCRKQY 140
>tpg|DAA37418.1| TPA: hypothetical protein ZEAMMB73_349198 [Zea mays]
Length = 347
Score = 90.5 bits (223), Expect = 5e-16
Identities = 45/103 (43%), Positives = 56/103 (54%), Gaps = 20/103 (19%)
Frame = -2
Query: 556 PEPKQYK--AWSPDDVCRPAFLPCLKPK--------NYSVDEGTQSC----------CPV 437
PEP Q K AW+PDD+ RP LP + + N D G + CP+
Sbjct: 207 PEPIQSKTRAWAPDDIFRPQSLPSISKQTSFPASIGNRWQDMGMSAAQQGILSLPLSCPI 266
Query: 436 CTEILDSTDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
C + LD TD F PC CGF +CLFC+N +LV+D RCP CR QY
Sbjct: 267 CCDDLDLTDSSFCPCPCGFHMCLFCHNRILVEDGRCPGCRKQY 309
>ref|NP_001143878.1| uncharacterized protein LOC100276679 [Zea mays]
gi|195628694|gb|ACG36177.1| hypothetical protein [Zea
mays]
Length = 347
Score = 90.5 bits (223), Expect = 5e-16
Identities = 45/103 (43%), Positives = 56/103 (54%), Gaps = 20/103 (19%)
Frame = -2
Query: 556 PEPKQYK--AWSPDDVCRPAFLPCLKPK--------NYSVDEGTQSC----------CPV 437
PEP Q K AW+PDD+ RP LP + + N D G + CP+
Sbjct: 207 PEPIQSKTRAWAPDDIFRPQSLPSISKQTSFPTSIGNRWQDMGMSAAQQGILSLPLSCPI 266
Query: 436 CTEILDSTDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
C + LD TD F PC CGF +CLFC+N +LV+D RCP CR QY
Sbjct: 267 CCDDLDLTDSSFCPCPCGFHMCLFCHNRILVEDGRCPGCRKQY 309
>ref|XP_006829471.1| hypothetical protein AMTR_s00074p00034110 [Amborella trichopoda]
gi|548834955|gb|ERM96887.1| hypothetical protein
AMTR_s00074p00034110 [Amborella trichopoda]
Length = 280
Score = 90.1 bits (222), Expect = 6e-16
Identities = 42/99 (42%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Frame = -2
Query: 553 EPKQYKAWSPDDVCRPAFLPCLKPK----------------NYSVDEGTQSCCPVCTEIL 422
E + +AW PDD RP LP L + N++ T S CP+C E L
Sbjct: 160 ENRTARAWRPDDASRPISLPTLSKQRSFPMNLDRHCLHGSMNWASSHSTPSSCPICYEEL 219
Query: 421 DSTDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQYA 305
D TD F PC CGF+LCLFC+ +L D RCP CR YA
Sbjct: 220 DVTDTSFFPCACGFRLCLFCHKRILEADGRCPGCRKHYA 258
>ref|XP_003575233.1| PREDICTED: uncharacterized protein LOC100842055 [Brachypodium
distachyon]
Length = 355
Score = 89.0 bits (219), Expect = 1e-15
Identities = 45/98 (45%), Positives = 51/98 (52%), Gaps = 19/98 (19%)
Frame = -2
Query: 544 QYKAWSPDDVCRPAFLPCLKPKNYSVDEGTQSC-------------------CPVCTEIL 422
Q +AWSPDDV RP LP L K S +C CP+C E L
Sbjct: 228 QTRAWSPDDVFRPHTLPSLS-KQVSFPSSMGNCWVGMGIGAAQKSIISFQMSCPICYEDL 286
Query: 421 DSTDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
D TD F PC CGF LCLFC+ +L DARCP CR+QY
Sbjct: 287 DPTDSSFLPCPCGFHLCLFCHKRILEADARCPGCRNQY 324
>ref|XP_002318012.1| hypothetical protein POPTR_0012s07620g [Populus trichocarpa]
gi|222858685|gb|EEE96232.1| hypothetical protein
POPTR_0012s07620g [Populus trichocarpa]
Length = 353
Score = 89.0 bits (219), Expect = 1e-15
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 20/112 (17%)
Frame = -2
Query: 583 EVMVTQKKIPE---PKQYKAWSPDDVCRPAFLPCL-KPKNYSVDE--------------- 461
E + +++IP P +AW PDD RP LP L K +++ +
Sbjct: 214 ENLTRERRIPSRVTPGNGRAWRPDDALRPQSLPNLSKQRSFPNTDRHYGRGMHAWVCASG 273
Query: 460 -GTQSCCPVCTEILDSTDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
S CP+CTE LD TD F PC CGF++CLFCYN +L D RCP+CR Y
Sbjct: 274 VNVPSACPICTEDLDFTDASFLPCSCGFQVCLFCYNKMLELDGRCPNCRELY 325
>ref|XP_006344994.1| PREDICTED: mediator of RNA polymerase II transcription subunit
1-like isoform X2 [Solanum tuberosum]
Length = 308
Score = 87.8 bits (216), Expect = 3e-15
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Frame = -2
Query: 655 QDSNQKMGKG-DRVRAAKGSKKDVKEVMVTQKKIPEPKQYKAWSPDDVCRPAFLPCL-KP 482
Q+ +++ G G DR SK++ + +T + P +AW PDD RP+ LP L K
Sbjct: 155 QEVSERQGSGIDR------SKQECNDRGLTPRP---PLSCQAWRPDDTFRPSGLPNLSKQ 205
Query: 481 KNYSVDE---------------GTQSCCPVCTEILDSTDQKFTPCRCGFKLCLFCYNTLL 347
++ ++ T + CP+C E LD TD F PC CGF+LCLFC+ +L
Sbjct: 206 HSFPMNSERHCRRDSVWGCKTLATPTLCPICCEDLDYTDTSFLPCSCGFRLCLFCHKKIL 265
Query: 346 VQDARCPSCRSQY 308
+D RCP CR QY
Sbjct: 266 EEDGRCPGCRKQY 278
>ref|XP_006344993.1| PREDICTED: mediator of RNA polymerase II transcription subunit
1-like isoform X1 [Solanum tuberosum]
Length = 348
Score = 87.8 bits (216), Expect = 3e-15
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Frame = -2
Query: 655 QDSNQKMGKG-DRVRAAKGSKKDVKEVMVTQKKIPEPKQYKAWSPDDVCRPAFLPCL-KP 482
Q+ +++ G G DR SK++ + +T + P +AW PDD RP+ LP L K
Sbjct: 195 QEVSERQGSGIDR------SKQECNDRGLTPRP---PLSCQAWRPDDTFRPSGLPNLSKQ 245
Query: 481 KNYSVDE---------------GTQSCCPVCTEILDSTDQKFTPCRCGFKLCLFCYNTLL 347
++ ++ T + CP+C E LD TD F PC CGF+LCLFC+ +L
Sbjct: 246 HSFPMNSERHCRRDSVWGCKTLATPTLCPICCEDLDYTDTSFLPCSCGFRLCLFCHKKIL 305
Query: 346 VQDARCPSCRSQY 308
+D RCP CR QY
Sbjct: 306 EEDGRCPGCRKQY 318
>ref|XP_004508817.1| PREDICTED: lisH domain-containing protein C1711.05-like isoform X1
[Cicer arietinum]
Length = 346
Score = 87.8 bits (216), Expect = 3e-15
Identities = 42/91 (46%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Frame = -2
Query: 538 KAWSPDDVCRPAFLPCLKPKNYSVDEGTQSC--------------CPVCTEILDSTDQKF 401
KAW DD RP LP L K +S+ + C CP+C E LD TD F
Sbjct: 227 KAWRADDAFRPQTLPNLS-KQHSMPNPDRCCGGGIPWSRNSVPSNCPICCEDLDLTDSSF 285
Query: 400 TPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
PC CGF+LCLFC+ +L QD RCP CR QY
Sbjct: 286 LPCNCGFRLCLFCHKRILEQDGRCPGCRKQY 316
>ref|XP_004975878.1| PREDICTED: uncharacterized protein LOC101752921 [Setaria italica]
Length = 355
Score = 87.4 bits (215), Expect = 4e-15
Identities = 45/104 (43%), Positives = 53/104 (50%), Gaps = 21/104 (20%)
Frame = -2
Query: 556 PEPKQYKA--WSPDDVCRPAFLPCLKPKNYSVDEGTQSC-------------------CP 440
PEP + KA W+PDD+ RP LP + K S +C CP
Sbjct: 214 PEPIRSKARAWAPDDIFRPQSLPSIS-KQASFPASIGNCWAGMGMSAAQQGILSLPLSCP 272
Query: 439 VCTEILDSTDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
+C E LD TD F PC CGF LCLFC+N +L D RCP CR QY
Sbjct: 273 ICYEDLDPTDSSFLPCPCGFHLCLFCHNRILEADGRCPGCRKQY 316
>ref|XP_002511474.1| conserved hypothetical protein [Ricinus communis]
gi|223550589|gb|EEF52076.1| conserved hypothetical
protein [Ricinus communis]
Length = 357
Score = 87.4 bits (215), Expect = 4e-15
Identities = 49/139 (35%), Positives = 64/139 (46%), Gaps = 22/139 (15%)
Frame = -2
Query: 658 LQDSNQKMGKGDRVRAAKGSKKDVKEVMVTQKKIPE---PKQYKAWSPDDVCRPAFLPCL 488
L+ S+Q++ + + +D K Q++ P P +AW PDD RP LP L
Sbjct: 193 LESSSQQIESDTNLNNLSSAHEDFK-----QEEHPPTLPPGNCRAWRPDDAFRPQSLPNL 247
Query: 487 K-------------------PKNYSVDEGTQSCCPVCTEILDSTDQKFTPCRCGFKLCLF 365
P +Y+ S CP+C E LD TD F PC CGF+LCLF
Sbjct: 248 SKQRSFPNGDRRYGHGGGGIPWSYTNVVNVPSSCPICCEDLDGTDTSFLPCICGFRLCLF 307
Query: 364 CYNTLLVQDARCPSCRSQY 308
CYN + D RCP CR Y
Sbjct: 308 CYNRIRQVDGRCPGCRKNY 326
>ref|XP_006354813.1| PREDICTED: mediator of RNA polymerase II transcription subunit
1-like [Solanum tuberosum]
Length = 354
Score = 87.0 bits (214), Expect = 5e-15
Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 16/97 (16%)
Frame = -2
Query: 550 PKQYKAWSPDDVCRPAFLPCL-KPKNYSVDEGTQ---------------SCCPVCTEILD 419
P ++AW PDD RP LP L K + ++ G + CP+C E LD
Sbjct: 228 PVSFQAWRPDDEFRPQSLPNLSKQYTFPMNSGRHYRGGSVWGCKSAAIPTSCPICCEDLD 287
Query: 418 STDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
TD F PC CGF+LCLFC+ +L +D RCP+CR QY
Sbjct: 288 FTDTSFLPCPCGFRLCLFCHKKILEEDGRCPACRKQY 324
>ref|XP_004236157.1| PREDICTED: uncharacterized protein LOC101261009 [Solanum
lycopersicum]
Length = 348
Score = 87.0 bits (214), Expect = 5e-15
Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 16/97 (16%)
Frame = -2
Query: 550 PKQYKAWSPDDVCRPAFLPCL-KPKNYSVDE---------------GTQSCCPVCTEILD 419
P +AW PDD RP+ LP L K ++ ++ T + CP+C E LD
Sbjct: 222 PLSCRAWRPDDTFRPSGLPNLSKQHSFPMNSERRCRRDSVWGCKTLATPTLCPICCEDLD 281
Query: 418 STDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
TD F PC CGF+LCLFC+ +L +D RCP CR QY
Sbjct: 282 YTDTSFLPCSCGFRLCLFCHKKILEEDGRCPGCRKQY 318
>ref|XP_004241517.1| PREDICTED: uncharacterized protein LOC101259850 [Solanum
lycopersicum]
Length = 354
Score = 87.0 bits (214), Expect = 5e-15
Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 16/97 (16%)
Frame = -2
Query: 550 PKQYKAWSPDDVCRPAFLPCL-KPKNYSVDEGTQ---------------SCCPVCTEILD 419
P ++AW PDD RP LP L K + ++ G + CP+C E LD
Sbjct: 228 PVSFQAWRPDDEFRPQSLPNLSKQYTFPMNSGRHCRGGSVWGCKSAAIPTSCPICCEDLD 287
Query: 418 STDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
TD F PC CGF+LCLFC+ +L +D RCP+CR QY
Sbjct: 288 FTDTSFLPCPCGFRLCLFCHKKILEEDGRCPACRKQY 324
>gb|ABI34275.1| hypothetical protein LES1_20t00015 [Solanum lycopersicum]
Length = 309
Score = 87.0 bits (214), Expect = 5e-15
Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 16/97 (16%)
Frame = -2
Query: 550 PKQYKAWSPDDVCRPAFLPCL-KPKNYSVDEGTQ---------------SCCPVCTEILD 419
P ++AW PDD RP LP L K + ++ G + CP+C E LD
Sbjct: 183 PVSFQAWRPDDEFRPQSLPNLSKQYTFPMNSGRHCRGGSVWGCKSAAIPTSCPICCEDLD 242
Query: 418 STDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
TD F PC CGF+LCLFC+ +L +D RCP+CR QY
Sbjct: 243 FTDTSFLPCPCGFRLCLFCHKKILEEDGRCPACRKQY 279
>ref|XP_006647423.1| PREDICTED: uncharacterized protein LOC102707188 [Oryza brachyantha]
Length = 347
Score = 86.7 bits (213), Expect = 7e-15
Identities = 44/102 (43%), Positives = 50/102 (49%), Gaps = 19/102 (18%)
Frame = -2
Query: 556 PEPKQYKAWSPDDVCRPAFLPCLKPKNYSVDEGTQSC-------------------CPVC 434
P + +AWSPDDV RP LP L K S +C CP+C
Sbjct: 216 PIKSRTRAWSPDDVFRPQSLPSLS-KQVSFPASMGNCWVAMGIGSAQKGILSLPISCPIC 274
Query: 433 TEILDSTDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
E LD TD F PC CGF LCLFC+ +L D RCP CR QY
Sbjct: 275 YEDLDPTDSSFLPCPCGFHLCLFCHKRILEADGRCPGCRKQY 316
>ref|XP_006280776.1| hypothetical protein CARUB_v10026747mg [Capsella rubella]
gi|482549480|gb|EOA13674.1| hypothetical protein
CARUB_v10026747mg [Capsella rubella]
Length = 336
Score = 86.7 bits (213), Expect = 7e-15
Identities = 50/117 (42%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Frame = -2
Query: 628 GDRVRAAKGSK--KDVKEVMVTQKKIPEPKQYKAWSPDDVCRPAFLPCLKPKNYSVDE-- 461
GD V A G+ KD K+ + + K +AW PDD RP LP L K S E
Sbjct: 192 GDSVSDASGAVGVKDAKQDCLRMSSRKQ-KSNRAWRPDDDLRPQGLPNLA-KQLSFPELD 249
Query: 460 ------GTQSCCPVCTEILDSTDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
S CP+C E LD TD F PC CGF+LCLFC+ T+ D RCP CR Y
Sbjct: 250 KRFSSVAIPSSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICDGDGRCPGCRKPY 306
>ref|XP_001758896.1| predicted protein [Physcomitrella patens]
gi|162690033|gb|EDQ76402.1| predicted protein
[Physcomitrella patens]
Length = 635
Score = 86.7 bits (213), Expect = 7e-15
Identities = 43/98 (43%), Positives = 50/98 (51%), Gaps = 21/98 (21%)
Frame = -2
Query: 538 KAWSPDDVCRPAFLPCLKPK--------------------NYSVDE-GTQSCCPVCTEIL 422
+AW PDDV RP LP L + N DE T S CP+CTE L
Sbjct: 520 RAWRPDDVARPPTLPRLAKQHSYPNHSSNNSYQGWGNMHGNLWADELATPSSCPICTEEL 579
Query: 421 DSTDQKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
D TD + PC CGF+LCLFCY+ + D RCP CR Y
Sbjct: 580 DVTDSSYIPCTCGFQLCLFCYHRISSDDGRCPGCRKAY 617
>ref|XP_006652382.1| PREDICTED: uncharacterized protein LOC102713894 [Oryza brachyantha]
Length = 330
Score = 85.9 bits (211), Expect = 1e-14
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Frame = -2
Query: 547 KQYKAWSPDDVCRPAFLP--------------CLKPKNYSVDEGTQSCCPVCTEILDSTD 410
++ +AW+PDDV RP LP C + V + CP+C E D TD
Sbjct: 222 RRTRAWAPDDVFRPQSLPNIARQASFPASIGNCWMDASQQVVHSSPLTCPICCEDFDPTD 281
Query: 409 QKFTPCRCGFKLCLFCYNTLLVQDARCPSCRSQY 308
F PC CGF+LCLFC++ +L D RCP CR +Y
Sbjct: 282 SSFCPCPCGFRLCLFCHHKILEADGRCPGCRKEY 315