BLASTX nr result

ID: Ephedra28_contig00002437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002437
         (783 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75944.1| unknown [Picea sitchensis]                             117   6e-24
gb|ABR16117.1| unknown [Picea sitchensis]                              65   3e-08
ref|XP_006838117.1| hypothetical protein AMTR_s00106p00058730 [A...    58   4e-06

>gb|ADE75944.1| unknown [Picea sitchensis]
          Length = 118

 Score =  117 bits (292), Expect = 6e-24
 Identities = 62/115 (53%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
 Frame = -3

Query: 760 MVRQTAYSAQGNYGMSQYASNPFESAPMHMGGGYDPFTMSANVPPPTNVXXXXXXXXXXX 581
           MVRQTAYS QG YG +Q+ +NPFES  M   G YDPF MS NVP P NV           
Sbjct: 1   MVRQTAYSGQGGYGSNQHGNNPFESNSMLSSGLYDPFAMSNNVPAPPNVQMAAMAQQQQA 60

Query: 580 MVLHQQPQN-LPVSSATMHGVHPANPFGDPFETTYAQQHAVGAGQNHANNPFGSP 419
           MVLHQQPQ  +P+S   M     ANPFGDPFET Y Q        +H NNPFG+P
Sbjct: 61  MVLHQQPQQMMPLSPTMMAMPQSANPFGDPFETNYTQGVGSFTQSSHQNNPFGNP 115


>gb|ABR16117.1| unknown [Picea sitchensis]
          Length = 547

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 47/120 (39%), Positives = 59/120 (49%)
 Frame = -3

Query: 781 DSLYEDAMVRQTAYSAQGNYGMSQYASNPFESAPMHMGGGYDPFTMSANVPPPTNVXXXX 602
           DSLYEDAM RQ +     +Y   Q A NPFE++PM M  G+DPF  S  V PP+ V    
Sbjct: 442 DSLYEDAMTRQVS-----SYHTGQVAPNPFEASPM-MQPGHDPFYASQKVAPPSAVQMAS 495

Query: 601 XXXXXXXMVLHQQPQNLPVSSATMHGVHPANPFGDPFETTYAQQHAVGAGQNHANNPFGS 422
                    + QQ Q        M    PANPFG+P+  T A  +A G     A  P+G+
Sbjct: 496 ---------MAQQQQAFMAQQQMMGQQLPANPFGNPY--TAAYPYAAGT-PYQAQYPYGN 543


>ref|XP_006838117.1| hypothetical protein AMTR_s00106p00058730 [Amborella trichopoda]
           gi|548840575|gb|ERN00686.1| hypothetical protein
           AMTR_s00106p00058730 [Amborella trichopoda]
          Length = 563

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 46/136 (33%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
 Frame = -3

Query: 781 DSLYEDAMVRQTAYSAQGNYGMSQYASNPFESAPMHMGGGYDPFTMSANVPPPTNVXXXX 602
           +SLYEDA+ RQ     Q  YG      NPFES        +DPF ++ N+PPP +V    
Sbjct: 453 ESLYEDAVYRQQ--QQQFTYGAPP--PNPFES--------HDPFAIANNIPPPPSV---- 496

Query: 601 XXXXXXXMVLHQQPQNLPVSSATMHG-------------VHPANPFGDPFETTYAQQHAV 461
                   + H Q Q   +   T  G               P+NPFGD   TT+    A+
Sbjct: 497 ----QMAAMAHHQQQQQMMMGMTSSGPFGHQPNYHHQQQFGPSNPFGD---TTFG---AL 546

Query: 460 GAGQNHANNPFGSPLI 413
               NH NNPFG+P +
Sbjct: 547 PPNPNHQNNPFGNPAL 562


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