BLASTX nr result
ID: Ephedra28_contig00002424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00002424
(1207 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004963613.1| PREDICTED: chloroplastic group IIA intron sp... 125 5e-26
ref|XP_006655563.1| PREDICTED: chloroplastic group IIA intron sp... 124 8e-26
gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indi... 123 2e-25
gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group] gi|... 123 2e-25
ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citr... 122 3e-25
ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citr... 122 3e-25
gb|EMJ12507.1| hypothetical protein PRUPE_ppa001468mg [Prunus pe... 121 5e-25
ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron sp... 120 8e-25
ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron sp... 120 8e-25
ref|XP_002532154.1| conserved hypothetical protein [Ricinus comm... 120 1e-24
gb|EOY21034.1| CRS1 / YhbY domain-containing protein [Theobroma ... 119 2e-24
emb|CBI15459.3| unnamed protein product [Vitis vinifera] 118 4e-24
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera] 118 4e-24
gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus pe... 118 6e-24
ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron sp... 118 6e-24
ref|XP_006406610.1| hypothetical protein EUTSA_v10020034mg [Eutr... 116 2e-23
ref|XP_003620478.1| Chloroplastic group IIA intron splicing faci... 115 3e-23
ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [A... 115 4e-23
gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitat... 114 6e-23
ref|XP_004512920.1| PREDICTED: chloroplastic group IIA intron sp... 114 6e-23
>ref|XP_004963613.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Setaria italica]
Length = 774
Score = 125 bits (313), Expect = 5e-26
Identities = 75/185 (40%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Frame = -3
Query: 527 VNSLLDKSWISIADVEEEHRAPR-----LPWDM-----AGDRQEGAVAEKRKRVKGPTLA 378
+ LLD+SW A + + A LPW+ AG R E A KR+RVK PTLA
Sbjct: 106 LGDLLDRSW---ARPDRQFAAASFDDAVLPWERDDEAAAGGRDEEDGA-KRRRVKAPTLA 161
Query: 377 ELVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNM 198
EL + D EL+RL + GM L++ I++ K+G+T + IH WR +ELV+L+F + + +M
Sbjct: 162 ELTIEDEELRRLRRLGMTLRDRITVPKAGVTTAITEKIHDAWRKSELVRLKFHEDLAHDM 221
Query: 197 KRAHHNVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQHGQLVNRFV 18
K AH VE RTGG++++RSGS +++YRG NYK +K L+ ++ G+ F+
Sbjct: 222 KTAHELVERRTGGLIIWRSGSVMVVYRGSNYK----RPLKSQTLNGASSQVKGEDGALFI 277
Query: 17 PDISS 3
PD SS
Sbjct: 278 PDASS 282
>ref|XP_006655563.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Oryza brachyantha]
Length = 760
Score = 124 bits (311), Expect = 8e-26
Identities = 73/186 (39%), Positives = 110/186 (59%), Gaps = 8/186 (4%)
Frame = -3
Query: 536 NINVNSLLDKSWISIADVEEEHRAPR-----LPWDM---AGDRQEGAVAEKRKRVKGPTL 381
N ++ LLD+SW + +++ A LPW+ A R E KRKRV+ P+L
Sbjct: 88 NERLSDLLDRSW---SRPDQQFAATSFDESVLPWERDESARSRGEEDDGVKRKRVRAPSL 144
Query: 380 AELVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLN 201
AEL + D EL+RL + GM L++ I++ K+G+T V IH WR +ELV+L+F + + +
Sbjct: 145 AELTIEDEELRRLRRMGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHD 204
Query: 200 MKRAHHNVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQHGQLVNRF 21
MK AH VE RTGG++++RSGS +++YRG NYK +K L ++ G+ F
Sbjct: 205 MKTAHELVERRTGGLIIWRSGSVMVVYRGSNYK----RPLKSEALDGTSSAVKGEDGTLF 260
Query: 20 VPDISS 3
+PD SS
Sbjct: 261 IPDASS 266
>gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indica Group]
Length = 801
Score = 123 bits (308), Expect = 2e-25
Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 8/186 (4%)
Frame = -3
Query: 536 NINVNSLLDKSWISIADVEEEHRAPR-----LPWD---MAGDRQEGAVAEKRKRVKGPTL 381
N ++ LLD+SW A +++ A LPW+ +A R+ KR+RV+ P+L
Sbjct: 127 NERLSDLLDRSW---ARPDQQFAASSFDESVLPWERDEVARGRENEEDGVKRRRVRAPSL 183
Query: 380 AELVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLN 201
AEL + D EL+RL + GM L++ I++ K+G+T V IH WR +ELV+L+F + + +
Sbjct: 184 AELTIEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHD 243
Query: 200 MKRAHHNVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQHGQLVNRF 21
MK AH VE RTGG++++RSGS +++YRG NYK +K L ++ G F
Sbjct: 244 MKTAHELVERRTGGLIIWRSGSVMVVYRGSNYK----RPLKSETLDGNSSAVKGADGTLF 299
Query: 20 VPDISS 3
+PD SS
Sbjct: 300 IPDASS 305
>gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group]
gi|50878415|gb|AAT85189.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 798
Score = 123 bits (308), Expect = 2e-25
Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 8/186 (4%)
Frame = -3
Query: 536 NINVNSLLDKSWISIADVEEEHRAPR-----LPWD---MAGDRQEGAVAEKRKRVKGPTL 381
N ++ LLD+SW A +++ A LPW+ +A R+ KR+RV+ P+L
Sbjct: 124 NERLSDLLDRSW---ARPDQQFAASSFDESVLPWERDEVARGRENEEDGVKRRRVRAPSL 180
Query: 380 AELVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLN 201
AEL + D EL+RL + GM L++ I++ K+G+T V IH WR +ELV+L+F + + +
Sbjct: 181 AELTIEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHD 240
Query: 200 MKRAHHNVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQHGQLVNRF 21
MK AH VE RTGG++++RSGS +++YRG NYK +K L ++ G F
Sbjct: 241 MKTAHELVERRTGGLIIWRSGSVMVVYRGSNYK----RPLKSETLDGNSSAVKGADGTLF 296
Query: 20 VPDISS 3
+PD SS
Sbjct: 297 IPDASS 302
>ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
gi|557543243|gb|ESR54221.1| hypothetical protein
CICLE_v10018859mg [Citrus clementina]
Length = 806
Score = 122 bits (306), Expect = 3e-25
Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 10/151 (6%)
Frame = -3
Query: 527 VNSLLDKSWIS----IADVEEEHRAPRLPWDMAGDRQEGAVAEK------RKRVKGPTLA 378
+ LL + W+ + +VE E LPW+ + A EK R+R+K PTLA
Sbjct: 163 LEDLLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLA 222
Query: 377 ELVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNM 198
EL + D EL+RL ++GM L+E I++ K+G+T DV+ IH WR +ELV+L+F + + +M
Sbjct: 223 ELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDM 282
Query: 197 KRAHHNVEGRTGGMVVYRSGSKVILYRGPNY 105
K AH VE RTGG+V++R+GS +++YRG NY
Sbjct: 283 KTAHEIVERRTGGLVIWRAGSVMVVYRGSNY 313
>ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
gi|567896982|ref|XP_006440979.1| hypothetical protein
CICLE_v10018859mg [Citrus clementina]
gi|567896984|ref|XP_006440980.1| hypothetical protein
CICLE_v10018859mg [Citrus clementina]
gi|557543240|gb|ESR54218.1| hypothetical protein
CICLE_v10018859mg [Citrus clementina]
gi|557543241|gb|ESR54219.1| hypothetical protein
CICLE_v10018859mg [Citrus clementina]
gi|557543242|gb|ESR54220.1| hypothetical protein
CICLE_v10018859mg [Citrus clementina]
Length = 833
Score = 122 bits (306), Expect = 3e-25
Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 10/151 (6%)
Frame = -3
Query: 527 VNSLLDKSWIS----IADVEEEHRAPRLPWDMAGDRQEGAVAEK------RKRVKGPTLA 378
+ LL + W+ + +VE E LPW+ + A EK R+R+K PTLA
Sbjct: 163 LEDLLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLA 222
Query: 377 ELVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNM 198
EL + D EL+RL ++GM L+E I++ K+G+T DV+ IH WR +ELV+L+F + + +M
Sbjct: 223 ELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDM 282
Query: 197 KRAHHNVEGRTGGMVVYRSGSKVILYRGPNY 105
K AH VE RTGG+V++R+GS +++YRG NY
Sbjct: 283 KTAHEIVERRTGGLVIWRAGSVMVVYRGSNY 313
>gb|EMJ12507.1| hypothetical protein PRUPE_ppa001468mg [Prunus persica]
Length = 820
Score = 121 bits (304), Expect = 5e-25
Identities = 73/180 (40%), Positives = 107/180 (59%), Gaps = 5/180 (2%)
Frame = -3
Query: 527 VNSLLDKSWISIADVEEEHRAP---RLPWDMAGD--RQEGAVAEKRKRVKGPTLAELVLP 363
+ LL + W+ V E ++ LPW+ + +E +++RVK P+LAEL +
Sbjct: 161 LGDLLQREWVRPDYVLAEQKSNDEVALPWEKEDEISEEEEVKGLRKRRVKAPSLAELTIE 220
Query: 362 DYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNMKRAHH 183
D ELKRL + GM L+E IS+ K+GIT V+ IH WR ELV+L+F + +L+MK AH
Sbjct: 221 DEELKRLRRMGMVLRERISVPKAGITQAVLEKIHDTWRKEELVRLKFHEVLALDMKTAHE 280
Query: 182 NVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQHGQLVNRFVPDISS 3
VE RTGG+V++RSGS +++YRG NYK + S + + G L F+PD+SS
Sbjct: 281 IVERRTGGLVLWRSGSVMVVYRGSNYKGPSK--------SQTVDREGGAL---FIPDVSS 329
>ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Citrus sinensis]
Length = 837
Score = 120 bits (302), Expect = 8e-25
Identities = 63/151 (41%), Positives = 96/151 (63%), Gaps = 10/151 (6%)
Frame = -3
Query: 527 VNSLLDKSWIS----IADVEEEHRAPRLPWDMAGDRQEGAVAEK------RKRVKGPTLA 378
+ LL + W+ + +VE E LPW+ + A EK R+R+K PTLA
Sbjct: 163 LEDLLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLA 222
Query: 377 ELVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNM 198
EL + D EL+RL ++GM L+E I++ K+G+T DV+ IH WR +ELV+L+F + + +M
Sbjct: 223 ELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDM 282
Query: 197 KRAHHNVEGRTGGMVVYRSGSKVILYRGPNY 105
K AH VE RTGG+V++R+GS +++Y+G NY
Sbjct: 283 KTAHEIVERRTGGLVIWRAGSVMVVYQGSNY 313
>ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 120 bits (302), Expect = 8e-25
Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 10/185 (5%)
Frame = -3
Query: 527 VNSLLDKSWISIADVEEEHRAPR------LPWDMAGDRQEGAVAE----KRKRVKGPTLA 378
+ LLD+SW + H A LPW+ D G E KRKRVK P+LA
Sbjct: 121 LGDLLDRSWAR----PDRHFAASSFDQAVLPWERDQDTDGGMDEEEGGAKRKRVKAPSLA 176
Query: 377 ELVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNM 198
EL + D EL+RL GM L++ I++ K+G+T V IH WR +ELV+L+F + + +M
Sbjct: 177 ELTMDDAELRRLRGMGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLANDM 236
Query: 197 KRAHHNVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQHGQLVNRFV 18
K AH VE RTGG++++R+GS +++YRG NY T K L ++ + G+ F+
Sbjct: 237 KTAHELVERRTGGLIIWRAGSVMVVYRGNNYTRPT----KSQTLDGTSSTRKGEDNTLFI 292
Query: 17 PDISS 3
PD SS
Sbjct: 293 PDASS 297
>ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
gi|223528164|gb|EEF30228.1| conserved hypothetical
protein [Ricinus communis]
Length = 745
Score = 120 bits (300), Expect = 1e-24
Identities = 74/189 (39%), Positives = 109/189 (57%), Gaps = 17/189 (8%)
Frame = -3
Query: 518 LLDKSWIS-----IADVEEEHRAPR-LPWDMA------GDRQEGAVAEKRKRVKGPTLAE 375
LL + W+ I D EE+ LPW+ G+++EG E+R+ VK PTLAE
Sbjct: 149 LLQREWVRPDTIFIKDDEEDDNDDLVLPWERKEKVRREGEKEEGE-RERRRVVKAPTLAE 207
Query: 374 LVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNMK 195
L + D EL+RL + GM L+E +++ K+G+T +VV IH WR NELV+L+F + + +MK
Sbjct: 208 LTIEDEELRRLRRMGMFLRERVNVPKAGLTKEVVEKIHDKWRKNELVRLKFHEVLAHDMK 267
Query: 194 RAHHNVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQHGQLVNR--- 24
AH E RTGG+V++R+GS +++YRG +Y+ P Q VNR
Sbjct: 268 TAHEITERRTGGLVIWRAGSVMVVYRGSSYE---------------GPPSKTQPVNREGD 312
Query: 23 --FVPDISS 3
F+PD+SS
Sbjct: 313 ALFIPDVSS 321
>gb|EOY21034.1| CRS1 / YhbY domain-containing protein [Theobroma cacao]
Length = 919
Score = 119 bits (299), Expect = 2e-24
Identities = 71/181 (39%), Positives = 106/181 (58%), Gaps = 6/181 (3%)
Frame = -3
Query: 527 VNSLLDKSWI--SIADVEEEHRAPRLPWDMAGDR----QEGAVAEKRKRVKGPTLAELVL 366
+ LL + W+ +E E LPW+ +EG + K++RV+ PTLAEL +
Sbjct: 223 LGDLLKREWVRPDTMLIEREKEEAVLPWERDEAEVEVVKEGVLGVKKRRVRAPTLAELTI 282
Query: 365 PDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNMKRAH 186
D EL+RL + GM L+E I++ K+GIT V+ IH WR ELV+L+F + + +MK AH
Sbjct: 283 EDEELRRLRRMGMYLRERINVPKAGITQAVLEKIHDKWRKEELVRLKFHEVLATDMKTAH 342
Query: 185 HNVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQHGQLVNRFVPDIS 6
VE RTGG+V++RSGS +++YRG NY E S + + G+ + F+PD+S
Sbjct: 343 EIVERRTGGLVLWRSGSVMVVYRGSNY---------EGPSRSQSIDREGEAL--FIPDVS 391
Query: 5 S 3
S
Sbjct: 392 S 392
>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
Length = 830
Score = 118 bits (296), Expect = 4e-24
Identities = 71/181 (39%), Positives = 106/181 (58%), Gaps = 6/181 (3%)
Frame = -3
Query: 527 VNSLLDKSWI---SIADVEEEHRAPRLPWDMAGDRQE--GAVAEKRKRVKGPTLAELVLP 363
+ LL + W+ S+ +E+ LPW+ +RQE G KR+ V+ PTLAEL +
Sbjct: 156 LGDLLQRDWVRPDSMLIEDEDEDDMILPWERGEERQEEEGDGRLKRRAVRAPTLAELTIE 215
Query: 362 DYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNMKRAHH 183
D EL+RL + GM ++E I++ K+GIT V+ IH+ WR ELV+L+F + + +MK AH
Sbjct: 216 DEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHE 275
Query: 182 NVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQ-HGQLVNRFVPDIS 6
VE RTGG+V +RSGS ++++RG NY+ P G+ + FVPD+S
Sbjct: 276 IVERRTGGLVTWRSGSVMVVFRGTNYE------------GPPKPQPVDGEGDSLFVPDVS 323
Query: 5 S 3
S
Sbjct: 324 S 324
>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
Length = 850
Score = 118 bits (296), Expect = 4e-24
Identities = 71/181 (39%), Positives = 106/181 (58%), Gaps = 6/181 (3%)
Frame = -3
Query: 527 VNSLLDKSWI---SIADVEEEHRAPRLPWDMAGDRQE--GAVAEKRKRVKGPTLAELVLP 363
+ LL + W+ S+ +E+ LPW+ +RQE G KR+ V+ PTLAEL +
Sbjct: 156 LGDLLQRDWVRPDSMLIEDEDEDDMILPWERGEERQEEEGDGRLKRRAVRAPTLAELTIE 215
Query: 362 DYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNMKRAHH 183
D EL+RL + GM ++E I++ K+GIT V+ IH+ WR ELV+L+F + + +MK AH
Sbjct: 216 DEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHE 275
Query: 182 NVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQ-HGQLVNRFVPDIS 6
VE RTGG+V +RSGS ++++RG NY+ P G+ + FVPD+S
Sbjct: 276 IVERRTGGLVTWRSGSVMVVFRGTNYE------------GPPKPQPVDGEGDSLFVPDVS 323
Query: 5 S 3
S
Sbjct: 324 S 324
>gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
Length = 906
Score = 118 bits (295), Expect = 6e-24
Identities = 58/142 (40%), Positives = 89/142 (62%)
Frame = -3
Query: 461 RLPWDMAGDRQEGAVAEKRKRVKGPTLAELVLPDYELKRLIKDGMELKEFISISKSGITI 282
RLPW + + RKR LAE +LPD+EL+RL + + E I + +GIT
Sbjct: 261 RLPWKRESELSSEEGDKTRKRRSNTELAERMLPDHELRRLRNVSLRMLERIKVGVTGITQ 320
Query: 281 DVVMSIHQVWRTNELVKLRFGQPYSLNMKRAHHNVEGRTGGMVVYRSGSKVILYRGPNYK 102
+V +IH+ W+ +E+VKL+F +P+SLNMKR H +E +TGG+V++RSGS V+LYRG Y
Sbjct: 321 ALVNTIHEKWKIDEVVKLKFEEPFSLNMKRTHEILESKTGGLVIWRSGSSVVLYRGMTYN 380
Query: 101 LLTAEEIKEIYLSSSNPMQHGQ 36
L + + ++S+ +QH +
Sbjct: 381 LPCVQTYAKHSQTNSHMLQHSE 402
>ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 794
Score = 118 bits (295), Expect = 6e-24
Identities = 59/152 (38%), Positives = 92/152 (60%)
Frame = -3
Query: 497 SIADVEEEHRAPRLPWDMAGDRQEGAVAEKRKRVKGPTLAELVLPDYELKRLIKDGMELK 318
SI V EE + + +++ + E E++KR LAE +P++EL+RL K + +
Sbjct: 160 SIGSVREERKG--MASEVSSNEAERVNGERKKRRSNTELAERTIPEHELRRLRKIALRMM 217
Query: 317 EFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNMKRAHHNVEGRTGGMVVYRSG 138
E + GIT ++V S+HQ WR E+VK +FG P S +MK+AH +E + GG+V++RSG
Sbjct: 218 ERFDVGVKGITQELVASVHQKWRDAEVVKFKFGIPLSAHMKKAHQILESKIGGIVIWRSG 277
Query: 137 SKVILYRGPNYKLLTAEEIKEIYLSSSNPMQH 42
S ++LYRG YKL E K++ L+ N + H
Sbjct: 278 SSIVLYRGMAYKLPCIENYKKVNLAKENAVDH 309
>ref|XP_006406610.1| hypothetical protein EUTSA_v10020034mg [Eutrema salsugineum]
gi|557107756|gb|ESQ48063.1| hypothetical protein
EUTSA_v10020034mg [Eutrema salsugineum]
Length = 874
Score = 116 bits (290), Expect = 2e-23
Identities = 74/188 (39%), Positives = 109/188 (57%), Gaps = 13/188 (6%)
Frame = -3
Query: 527 VNSLLDKSWIS----IADVEEEHRAPR---LPWD-----MAGDRQEG-AVAEKRKRVKGP 387
+ LL + W+ +A+ EEE LPW+ A +R EG A K++R + P
Sbjct: 175 LGDLLKREWVRPDMMLAEGEEESDEDDDVLLPWEKNEEEQAAERMEGDGAAVKKRRARAP 234
Query: 386 TLAELVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYS 207
+LAEL + D EL+RL +DGM L+ ISI K+G+T V+ IH WR ELV+L+F + +
Sbjct: 235 SLAELTVEDSELRRLRRDGMYLRVRISIPKAGLTQAVMEKIHDTWRKEELVRLKFHEVLA 294
Query: 206 LNMKRAHHNVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQHGQLVN 27
+M+ AH VE RTGGMV++R+GS +++YRG +Y+ + SN M +
Sbjct: 295 RDMRTAHEIVERRTGGMVIWRAGSVMVVYRGRDYQGPS---------MISNQMARPE-ET 344
Query: 26 RFVPDISS 3
FVPD+SS
Sbjct: 345 LFVPDVSS 352
>ref|XP_003620478.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula] gi|355495493|gb|AES76696.1| Chloroplastic
group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 820
Score = 115 bits (289), Expect = 3e-23
Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 12/187 (6%)
Frame = -3
Query: 527 VNSLLDKSWIS---IADVEEEHRAPRLPWDMAGDRQE------GAVAE---KRKRVKGPT 384
++ LL W+ + D E+E +PW +R+ G + E K++ +K P+
Sbjct: 148 LSELLKIKWVRPDVLLDEEDEDEKMVVPWKREEEREMRSIDSGGGIKEEGFKKRTLKAPS 207
Query: 383 LAELVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSL 204
LAEL L D L+RL ++GM L+E +S+ K+G+T +V+ IH+ WR ELV+L+F + +
Sbjct: 208 LAELTLEDELLRRLRREGMHLRERVSVPKAGLTQEVMEKIHESWRKKELVRLKFHEELAK 267
Query: 203 NMKRAHHNVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQHGQLVNR 24
NM+ AH VE RTGG+V +R+GS +I+YRG NY+ + E+ ++ G
Sbjct: 268 NMRIAHQIVERRTGGLVTWRAGSVMIVYRGKNYQGPASPEL---------DVKEGD--GF 316
Query: 23 FVPDISS 3
FVPD+SS
Sbjct: 317 FVPDVSS 323
>ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [Amborella trichopoda]
gi|548844363|gb|ERN03972.1| hypothetical protein
AMTR_s00079p00107040 [Amborella trichopoda]
Length = 826
Score = 115 bits (288), Expect = 4e-23
Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Frame = -3
Query: 518 LLDKSWISIADVEEEHRAPR--LPWDMAGDRQEGAVAEKRKRVKGPTLAELVLPDYELKR 345
LL K+W V R LPW+ + + + EK +R+K PTLAEL + D EL+R
Sbjct: 147 LLQKTWERPDQVVNGDRISDALLPWERSEEGEYETKKEKSRRIKAPTLAELTIEDSELRR 206
Query: 344 LIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNMKRAHHNVEGRT 165
L K G+ L+E I++ K+G+T V+ IH WR +ELV+L+F + +MK AH VE RT
Sbjct: 207 LRKLGITLRERINVPKAGVTQAVLEKIHMAWRKSELVRLKFHETLVHDMKTAHEIVERRT 266
Query: 164 GGMVVYRSGSKVILYRGPNY--KLLTAEEIKEIYLSSSNPMQHGQLVNRFVPDIS 6
GG+V++ SGS +++YRG Y + + E + ++N + G + FVPD++
Sbjct: 267 GGLVIWMSGSVMVVYRGSTYGQQPSSRPNTSEEEVIATNLVHEGDTL--FVPDVA 319
>gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 838
Score = 114 bits (286), Expect = 6e-23
Identities = 62/148 (41%), Positives = 92/148 (62%), Gaps = 6/148 (4%)
Frame = -3
Query: 527 VNSLLDKSWIS---IADVEEEHRAPRLPWDMAGDRQ---EGAVAEKRKRVKGPTLAELVL 366
+ LL + WI + + EE LPW+ + + EG +++RV PTLAEL +
Sbjct: 167 LGDLLRREWIRPDFVLEEEESKDDLTLPWEREEEEKGVDEGTRELRKRRVNAPTLAELTI 226
Query: 365 PDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLNMKRAH 186
D EL+RL + GM L++ IS+ K+G+T V+ IH WR ELV+L+F + + +MK AH
Sbjct: 227 EDEELRRLRRMGMFLRDRISVPKAGLTQAVLEKIHDKWRKEELVRLKFHEVLAHDMKTAH 286
Query: 185 HNVEGRTGGMVVYRSGSKVILYRGPNYK 102
VE RTGG+V +RSGS +++YRG NY+
Sbjct: 287 EIVERRTGGLVTWRSGSVMVVYRGSNYE 314
>ref|XP_004512920.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cicer arietinum]
Length = 809
Score = 114 bits (286), Expect = 6e-23
Identities = 66/186 (35%), Positives = 107/186 (57%), Gaps = 11/186 (5%)
Frame = -3
Query: 527 VNSLLDKSWIS----IADVEEEHRAPRLPWDMAGDRQEGA-------VAEKRKRVKGPTL 381
++ LL + W+ + D ++E LPW +R+ G K++ +K P+L
Sbjct: 138 LSELLKRKWVRPDALLDDEDKEEDEMVLPWKREEEREMGGGDVGIDEEGLKKRTIKAPSL 197
Query: 380 AELVLPDYELKRLIKDGMELKEFISISKSGITIDVVMSIHQVWRTNELVKLRFGQPYSLN 201
AEL L D L+RL ++GM ++E +S+ K+G+T +V+ IH+ WR ELV+L+F + + N
Sbjct: 198 AELTLEDELLRRLRREGMRVRERVSVPKAGLTQEVMEKIHERWRKEELVRLKFHEELAKN 257
Query: 200 MKRAHHNVEGRTGGMVVYRSGSKVILYRGPNYKLLTAEEIKEIYLSSSNPMQHGQLVNRF 21
M+ AH VE RTGG+V +R+GS +++YRG NY+ +SS + + F
Sbjct: 258 MRVAHEIVERRTGGLVTWRAGSVMMVYRGKNYQ----------GPNSSKELDAKEGDGFF 307
Query: 20 VPDISS 3
VPD+SS
Sbjct: 308 VPDVSS 313