BLASTX nr result

ID: Ephedra28_contig00002297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002297
         (370 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17684.1| unknown [Picea sitchensis]                              66   4e-09
ref|XP_003603438.1| Potassium channel [Medicago truncatula] gi|3...    57   3e-06

>gb|ABR17684.1| unknown [Picea sitchensis]
          Length = 659

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 29/55 (52%), Positives = 45/55 (81%)
 Frame = +3

Query: 6   LPDTIDQLYDIARRKFEFDPVQLFSQEGAQIEDMDVIRDMDHLFFVDQQEVEELF 170
           LPDT+DQL  +A  KF F PV++ +++GA+I++++VIRD D LF VD++E+EEL+
Sbjct: 602 LPDTVDQLLKMAGLKFGFHPVKVLNEDGAEIDEINVIRDNDPLFLVDKEELEELY 656


>ref|XP_003603438.1| Potassium channel [Medicago truncatula] gi|355492486|gb|AES73689.1|
           Potassium channel [Medicago truncatula]
          Length = 884

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/43 (51%), Positives = 36/43 (83%)
 Frame = +3

Query: 6   LPDTIDQLYDIARRKFEFDPVQLFSQEGAQIEDMDVIRDMDHL 134
           LPD++++L DI  +KF+F P ++ ++EGA+I+D+D+IRD DHL
Sbjct: 838 LPDSLEELLDIGAKKFDFSPTKILTKEGAEIDDIDLIRDGDHL 880


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