BLASTX nr result

ID: Ephedra28_contig00002147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002147
         (396 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24232.1| unknown [Picea sitchensis]                              56   4e-13

>gb|ABK24232.1| unknown [Picea sitchensis]
          Length = 481

 Score = 56.2 bits (134), Expect(2) = 4e-13
 Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 7/56 (12%)
 Frame = -2

Query: 149 LSTLIGQAGSTSRQGVLSS-----LGELDS--RPRTADLSPLQLRKTGGPRTSPIN 3
           LS LI Q GSTSR+GV+SS     L + DS  RPR ADLSP+ L  TGG R+SP++
Sbjct: 389 LSGLISQTGSTSRRGVISSSRQAILSDADSSSRPRAADLSPIALHNTGGQRSSPVS 444



 Score = 43.5 bits (101), Expect(2) = 4e-13
 Identities = 23/66 (34%), Positives = 33/66 (50%)
 Frame = -1

Query: 396 QTQIASTPQRALXXXXXXXXXXXXXXADKSGDKEVRENLWSTIGPDGLRRRTSGAAANSS 217
           QTQ+A+TP  ++                 SG ++ R+N WS+ G D  RRR +GA  N+ 
Sbjct: 297 QTQMANTPPPSIGAAVGSSSRAPPVADKSSGGQDGRDNPWSSAGADSSRRRNTGAIVNAG 356

Query: 216 SFSLAK 199
           S S  K
Sbjct: 357 SLSKHK 362


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