BLASTX nr result
ID: Ephedra28_contig00002089
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00002089
(897 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus... 197 3e-48
ref|XP_002306609.2| hypothetical protein POPTR_0005s16160g [Popu... 196 1e-47
gb|ABK23197.1| unknown [Picea sitchensis] gi|148906984|gb|ABR166... 195 2e-47
ref|XP_002302256.1| hypothetical protein POPTR_0002s08900g [Popu... 194 3e-47
gb|EXB44329.1| 30S ribosomal protein S13 [Morus notabilis] 193 8e-47
gb|EOY16180.1| Ribosomal protein S13/S18 family [Theobroma cacao] 193 8e-47
ref|XP_006434118.1| hypothetical protein CICLE_v10002692mg [Citr... 192 1e-46
gb|EPS72074.1| hypothetical protein M569_02688 [Genlisea aurea] 191 3e-46
gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea bras... 191 3e-46
ref|XP_003601110.1| 30S ribosomal protein S13 [Medicago truncatu... 189 9e-46
ref|XP_006288790.1| hypothetical protein CARUB_v10002113mg [Caps... 188 3e-45
ref|XP_004238695.1| PREDICTED: 30S ribosomal protein S13, chloro... 188 3e-45
ref|XP_006355960.1| PREDICTED: 30S ribosomal protein S13, chloro... 187 3e-45
gb|EMJ27157.1| hypothetical protein PRUPE_ppa012483mg [Prunus pe... 187 3e-45
ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloro... 187 3e-45
ref|NP_568299.1| 30S ribosomal protein S13 [Arabidopsis thaliana... 187 5e-45
ref|XP_004290827.1| PREDICTED: 30S ribosomal protein S13, chloro... 187 5e-45
ref|XP_004500599.1| PREDICTED: 30S ribosomal protein S13, chloro... 186 8e-45
ref|XP_006399943.1| hypothetical protein EUTSA_v10014848mg [Eutr... 186 1e-44
gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi] gi|1... 185 2e-44
>ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13,
putative [Ricinus communis]
Length = 290
Score = 197 bits (502), Expect = 3e-48
Identities = 97/139 (69%), Positives = 117/139 (84%)
Frame = +2
Query: 212 SNVSSKKSQKIPRLNIRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILLDLQLENKR 391
SN +S + L+IRCARVGGVEIPN KRIE SLQYIHG+GR+RAR+IL DL +ENK
Sbjct: 151 SNWDGHQSLAVHGLSIRCARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILSDLSMENKI 210
Query: 392 TKDLSQDELIKLRKEVTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRN 571
TK+LS++ELI LR EV++Y IEGDLRRFN NIR+L EI+ YRG RH++GLPCRGQRT+N
Sbjct: 211 TKELSEEELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKN 270
Query: 572 NCRTLKGRRISVAKKKKTP 628
NCRTLKG+R++VA KKKTP
Sbjct: 271 NCRTLKGKRVTVAGKKKTP 289
Score = 118 bits (295), Expect = 3e-24
Identities = 61/114 (53%), Positives = 80/114 (70%)
Frame = +2
Query: 257 IRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILLDLQLENKRTKDLSQDELIKLRKE 436
++C RVG EIP+ K++ +LQ+I GIGR RA +IL+DL LENKRTKDL+ EL LR E
Sbjct: 33 VQCLRVGNAEIPDDKQLRFALQHIRGIGRQRAHQILIDLSLENKRTKDLTGLELHTLRNE 92
Query: 437 VTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRNNCRTLKGRR 598
V++Y I +L R ++I++L +I+ YRG H LPCRGQ TR N RT KG R
Sbjct: 93 VSKYLIGEELTRCVRSDIQRLADIQCYRGYNHACLLPCRGQLTRTNARTRKGMR 146
>ref|XP_002306609.2| hypothetical protein POPTR_0005s16160g [Populus trichocarpa]
gi|550339105|gb|EEE93605.2| hypothetical protein
POPTR_0005s16160g [Populus trichocarpa]
Length = 168
Score = 196 bits (497), Expect = 1e-47
Identities = 105/172 (61%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Frame = +2
Query: 116 AHTLHAIARAPTIVSFYNNKKSCQVSSKPTT-ISNVSSKKSQKIPRLNIRCARVGGVEIP 292
A TL A+ P++ + N K+ +SS + +SN K+ L+IRCARVGGVEIP
Sbjct: 2 AQTL-AMPVVPSLSAICNGLKNTSLSSSISPPVSN-----PPKVCSLSIRCARVGGVEIP 55
Query: 293 NQKRIETSLQYIHGIGRTRARKILLDLQLENKRTKDLSQDELIKLRKEVTEYEIEGDLRR 472
N KR+E SLQYIHGIGR+ AR+IL DL +ENK TKDLS+DELI LR EV++Y IEGDLRR
Sbjct: 56 NSKRVEYSLQYIHGIGRSIARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRR 115
Query: 473 FNDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRNNCRTLKGRRISVAKKKKTP 628
FN NIR+L EI+ YRG RH++GLPCRGQRT+NNCRTLKG+R+S+ KKK P
Sbjct: 116 FNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVSIPGKKKAP 167
>gb|ABK23197.1| unknown [Picea sitchensis] gi|148906984|gb|ABR16636.1| unknown
[Picea sitchensis] gi|224284072|gb|ACN39773.1| unknown
[Picea sitchensis]
Length = 169
Score = 195 bits (496), Expect = 2e-47
Identities = 95/161 (59%), Positives = 122/161 (75%)
Frame = +2
Query: 146 PTIVSFYNNKKSCQVSSKPTTISNVSSKKSQKIPRLNIRCARVGGVEIPNQKRIETSLQY 325
P + N + +++S +S+ K LNIRCARVGGVEIPN K+IE SLQY
Sbjct: 8 PAVPVLTNLGRGGEINSLMPNKCYISTSNVPKFAGLNIRCARVGGVEIPNNKKIEYSLQY 67
Query: 326 IHGIGRTRARKILLDLQLENKRTKDLSQDELIKLRKEVTEYEIEGDLRRFNDTNIRKLIE 505
IHGIGRT AR++L DL +ENK T++L++ EL ++R EV++Y IEGDLRRFN+ IR+LIE
Sbjct: 68 IHGIGRTTARQVLYDLGMENKVTRELNESELTRVRDEVSKYMIEGDLRRFNNLAIRRLIE 127
Query: 506 IRSYRGRRHMRGLPCRGQRTRNNCRTLKGRRISVAKKKKTP 628
I+ YRGRRH+ GLPCRGQRT+NNCRTLKG+R+S+A KKK P
Sbjct: 128 IQCYRGRRHVAGLPCRGQRTKNNCRTLKGKRVSIAGKKKAP 168
>ref|XP_002302256.1| hypothetical protein POPTR_0002s08900g [Populus trichocarpa]
gi|118488232|gb|ABK95935.1| unknown [Populus
trichocarpa] gi|222843982|gb|EEE81529.1| hypothetical
protein POPTR_0002s08900g [Populus trichocarpa]
Length = 168
Score = 194 bits (494), Expect = 3e-47
Identities = 98/147 (66%), Positives = 118/147 (80%), Gaps = 3/147 (2%)
Frame = +2
Query: 197 KPTTISNVSSKKSQKIPR---LNIRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILL 367
K T++SN S P+ L+IRCARVGGVEIPN KR+E SLQYIHGIGR+ AR+IL
Sbjct: 21 KSTSLSNSISLPISNPPKAGSLSIRCARVGGVEIPNSKRVEYSLQYIHGIGRSNARQILS 80
Query: 368 DLQLENKRTKDLSQDELIKLRKEVTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLP 547
DL +ENK TKDLS++ELI LR EV++Y IEGDLRRFN NIR+L EI+ YRG RH++GLP
Sbjct: 81 DLSMENKITKDLSEEELIILRDEVSKYTIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLP 140
Query: 548 CRGQRTRNNCRTLKGRRISVAKKKKTP 628
CRGQRT+NNCRTLKG+R+S+ KKK P
Sbjct: 141 CRGQRTKNNCRTLKGKRVSIPGKKKAP 167
>gb|EXB44329.1| 30S ribosomal protein S13 [Morus notabilis]
Length = 168
Score = 193 bits (490), Expect = 8e-47
Identities = 103/174 (59%), Positives = 129/174 (74%), Gaps = 3/174 (1%)
Frame = +2
Query: 116 AHTLHAIARAPTIVSFYNNKKSCQVSSK---PTTISNVSSKKSQKIPRLNIRCARVGGVE 286
A TL A+ AP++ + N S +S++ PTT +I L+++CARVGGVE
Sbjct: 2 AQTL-AMPVAPSLSAICNGLSSISLSNRLSFPTT-------NPLQIGGLSVKCARVGGVE 53
Query: 287 IPNQKRIETSLQYIHGIGRTRARKILLDLQLENKRTKDLSQDELIKLRKEVTEYEIEGDL 466
IPN KRIE SLQY+HGIGRT ARKIL DL +ENK TKD S+DELI LR EV++Y IEGDL
Sbjct: 54 IPNNKRIEFSLQYVHGIGRTSARKILNDLSMENKLTKDFSEDELIILRDEVSKYMIEGDL 113
Query: 467 RRFNDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRNNCRTLKGRRISVAKKKKTP 628
RRFN IR+L EI+ YRG RH++GLPCRGQRT+NNCRTLKG+++++A KKK P
Sbjct: 114 RRFNALAIRRLKEIQCYRGVRHIKGLPCRGQRTKNNCRTLKGKKVAIAGKKKAP 167
>gb|EOY16180.1| Ribosomal protein S13/S18 family [Theobroma cacao]
Length = 168
Score = 193 bits (490), Expect = 8e-47
Identities = 104/172 (60%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Frame = +2
Query: 116 AHTLHAIARAPTIVSFYNNKKSCQVSSKPTT-ISNVSSKKSQKIPRLNIRCARVGGVEIP 292
A TL A+ AP++ N S +S+ + +SN +S L+I CARVGGVEIP
Sbjct: 2 AQTL-AMPVAPSLSFICNKTSSLSLSNSVSLPLSNPPKYRS-----LSIECARVGGVEIP 55
Query: 293 NQKRIETSLQYIHGIGRTRARKILLDLQLENKRTKDLSQDELIKLRKEVTEYEIEGDLRR 472
N KR+E SLQYIHGIGR+RARKIL DL++ENK TKDLS++ELI +R EV++Y IEGDLRR
Sbjct: 56 NNKRVEFSLQYIHGIGRSRARKILCDLKMENKITKDLSEEELITIRDEVSKYMIEGDLRR 115
Query: 473 FNDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRNNCRTLKGRRISVAKKKKTP 628
FN NIR+L EI+ YRG RH++GLPCRGQRT+NN RTLKG+R++VA KKK P
Sbjct: 116 FNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNTRTLKGKRVTVAGKKKAP 167
>ref|XP_006434118.1| hypothetical protein CICLE_v10002692mg [Citrus clementina]
gi|568837402|ref|XP_006472713.1| PREDICTED: 30S
ribosomal protein S13, chloroplastic-like [Citrus
sinensis] gi|557536240|gb|ESR47358.1| hypothetical
protein CICLE_v10002692mg [Citrus clementina]
Length = 169
Score = 192 bits (489), Expect = 1e-46
Identities = 91/133 (68%), Positives = 114/133 (85%)
Frame = +2
Query: 230 KSQKIPRLNIRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILLDLQLENKRTKDLSQ 409
K + P L+I+CARVGGVEIPN KRIE SLQYIHG+GRTRAR+IL+DL++ENK TKD+S+
Sbjct: 36 KQPQYPGLSIQCARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKITKDMSE 95
Query: 410 DELIKLRKEVTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRNNCRTLK 589
+ELI +R EV++Y IEGDLRRFN IR+L EI+ YRG RH++GLPCRGQ T+NNCRTLK
Sbjct: 96 EELITIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLK 155
Query: 590 GRRISVAKKKKTP 628
G+R+++A KKK P
Sbjct: 156 GKRVAIAGKKKAP 168
>gb|EPS72074.1| hypothetical protein M569_02688 [Genlisea aurea]
Length = 158
Score = 191 bits (485), Expect = 3e-46
Identities = 95/145 (65%), Positives = 117/145 (80%)
Frame = +2
Query: 188 VSSKPTTISNVSSKKSQKIPRLNIRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILL 367
+SS P T S+ SS K+ L+I+CARVGGVEIPN KR+E SLQYIHGIGRT +R+IL
Sbjct: 14 ISSNPATRSS-SSSSFPKVGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTNSRQILN 72
Query: 368 DLQLENKRTKDLSQDELIKLRKEVTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLP 547
DL L+NK TKDLS++EL LR EV++Y IEGDLRRFN IR+L EI+ YRG RH++GLP
Sbjct: 73 DLNLDNKLTKDLSEEELTSLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGMRHIQGLP 132
Query: 548 CRGQRTRNNCRTLKGRRISVAKKKK 622
CRGQRT+NNCRTLKG+R+++ KKK
Sbjct: 133 CRGQRTKNNCRTLKGKRVAIPGKKK 157
>gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
Length = 168
Score = 191 bits (485), Expect = 3e-46
Identities = 101/171 (59%), Positives = 129/171 (75%)
Frame = +2
Query: 116 AHTLHAIARAPTIVSFYNNKKSCQVSSKPTTISNVSSKKSQKIPRLNIRCARVGGVEIPN 295
A TL A+ AP++ N ++ +S T ++ KI L+I+CARVGGVEIPN
Sbjct: 2 AQTL-AMPVAPSLSLICNGWRNNSLS----TFVSLPISNPPKIHGLSIQCARVGGVEIPN 56
Query: 296 QKRIETSLQYIHGIGRTRARKILLDLQLENKRTKDLSQDELIKLRKEVTEYEIEGDLRRF 475
KR+E SLQYIHG+GR+RAR+IL DL ++NK TKDLS++ELI LR EV++Y IEGDLRRF
Sbjct: 57 NKRVEYSLQYIHGVGRSRARQILSDLSMQNKITKDLSEEELITLRDEVSKYMIEGDLRRF 116
Query: 476 NDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRNNCRTLKGRRISVAKKKKTP 628
N NIR L EI+ +RG RH++GLPCRGQRT+NNCRTLKG+R++VA KKK P
Sbjct: 117 NALNIRGLKEIQCHRGIRHIQGLPCRGQRTKNNCRTLKGKRVTVAGKKKAP 167
>ref|XP_003601110.1| 30S ribosomal protein S13 [Medicago truncatula]
gi|355490158|gb|AES71361.1| 30S ribosomal protein S13
[Medicago truncatula] gi|388516343|gb|AFK46233.1|
unknown [Medicago truncatula]
Length = 166
Score = 189 bits (481), Expect = 9e-46
Identities = 91/135 (67%), Positives = 111/135 (82%)
Frame = +2
Query: 218 VSSKKSQKIPRLNIRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILLDLQLENKRTK 397
V + K+ RLNI C RVGGVEIPN KRIE SLQYIHG+GR RAR+IL D+ +ENK TK
Sbjct: 31 VLNTPKSKVQRLNIVCVRVGGVEIPNNKRIEFSLQYIHGVGRNRARQILTDISMENKVTK 90
Query: 398 DLSQDELIKLRKEVTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRNNC 577
+LS++ELI LR EV +Y IEGDLRRFN NI++L EI+ YRG RH++GLPCRGQRT+NNC
Sbjct: 91 ELSEEELISLRDEVNKYMIEGDLRRFNALNIKRLKEIQCYRGIRHIQGLPCRGQRTKNNC 150
Query: 578 RTLKGRRISVAKKKK 622
RTLKG++++VA KKK
Sbjct: 151 RTLKGKKVTVAGKKK 165
>ref|XP_006288790.1| hypothetical protein CARUB_v10002113mg [Capsella rubella]
gi|482557496|gb|EOA21688.1| hypothetical protein
CARUB_v10002113mg [Capsella rubella]
Length = 169
Score = 188 bits (477), Expect = 3e-45
Identities = 95/163 (58%), Positives = 126/163 (77%)
Frame = +2
Query: 134 IARAPTIVSFYNNKKSCQVSSKPTTISNVSSKKSQKIPRLNIRCARVGGVEIPNQKRIET 313
+A + +++ + ++ SN +K+S L+IRCARVGGVEIP+ KRIE
Sbjct: 9 VAHSLSLICSWTKSNPLSRNTLALPASNSPNKQS-----LSIRCARVGGVEIPSNKRIEY 63
Query: 314 SLQYIHGIGRTRARKILLDLQLENKRTKDLSQDELIKLRKEVTEYEIEGDLRRFNDTNIR 493
SLQYIHGIGRTRAR+IL+DLQ+ENK TKD++++ELI LR EV++Y IEGDLRRFN I+
Sbjct: 64 SLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNALAIK 123
Query: 494 KLIEIRSYRGRRHMRGLPCRGQRTRNNCRTLKGRRISVAKKKK 622
+L EI+ YRG RH++GLPCRGQRT+NNCRTLKG++I++A KKK
Sbjct: 124 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKK 166
>ref|XP_004238695.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Solanum
lycopersicum]
Length = 168
Score = 188 bits (477), Expect = 3e-45
Identities = 91/145 (62%), Positives = 117/145 (80%)
Frame = +2
Query: 194 SKPTTISNVSSKKSQKIPRLNIRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILLDL 373
SK +++S + K L I+C RVGGVE+PN KR+E SLQYIHGIGRT AR+IL+DL
Sbjct: 23 SKHSSLSFSTPTSFPKTAGLVIKCVRVGGVEVPNNKRVEFSLQYIHGIGRTTARQILVDL 82
Query: 374 QLENKRTKDLSQDELIKLRKEVTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLPCR 553
Q+ENK KD+S++ELI LR+EV++Y IEGDLRRFN IR+L EI+ YRG RH++GLPCR
Sbjct: 83 QMENKVMKDMSEEELITLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCR 142
Query: 554 GQRTRNNCRTLKGRRISVAKKKKTP 628
GQRT+NNCRTLKG+++++A KKK P
Sbjct: 143 GQRTKNNCRTLKGKKVAIAGKKKAP 167
>ref|XP_006355960.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Solanum
tuberosum]
Length = 168
Score = 187 bits (476), Expect = 3e-45
Identities = 91/145 (62%), Positives = 117/145 (80%)
Frame = +2
Query: 194 SKPTTISNVSSKKSQKIPRLNIRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILLDL 373
SK +++S + K L I+C RVGGVE+PN KR+E SLQYIHGIGRT AR+IL+DL
Sbjct: 23 SKHSSLSFSTPTSFPKTGGLVIKCVRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDL 82
Query: 374 QLENKRTKDLSQDELIKLRKEVTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLPCR 553
Q+ENK KD+S++ELI LR+EV++Y IEGDLRRFN IR+L EI+ YRG RH++GLPCR
Sbjct: 83 QMENKVMKDMSEEELITLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCR 142
Query: 554 GQRTRNNCRTLKGRRISVAKKKKTP 628
GQRT+NNCRTLKG+++++A KKK P
Sbjct: 143 GQRTKNNCRTLKGKKVAIAGKKKAP 167
>gb|EMJ27157.1| hypothetical protein PRUPE_ppa012483mg [Prunus persica]
Length = 167
Score = 187 bits (476), Expect = 3e-45
Identities = 100/172 (58%), Positives = 126/172 (73%), Gaps = 3/172 (1%)
Frame = +2
Query: 116 AHTLHAIARAPTIVSFYNNKKSCQVSSKPTTISNVSS---KKSQKIPRLNIRCARVGGVE 286
A TL A+ AP++ N + P +SN S + K+ L+I+C RVGGVE
Sbjct: 2 AQTL-AMPLAPSLSVICNGRN-------PNPLSNSLSFPLRNPNKVGGLSIKCVRVGGVE 53
Query: 287 IPNQKRIETSLQYIHGIGRTRARKILLDLQLENKRTKDLSQDELIKLRKEVTEYEIEGDL 466
IPN KR+E SLQY+HGIGRTRAR IL+DL +ENK TKDLS++EL +R EV++Y IEGDL
Sbjct: 54 IPNNKRVEFSLQYVHGIGRTRARTILIDLNMENKITKDLSEEELTIIRDEVSKYMIEGDL 113
Query: 467 RRFNDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRNNCRTLKGRRISVAKKKK 622
RRFN NIR+L EI+ YRG RH++GLPCRGQRT+NN RTLKG+R++VA KKK
Sbjct: 114 RRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNTRTLKGKRVTVAGKKK 165
>ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
vinifera] gi|302141873|emb|CBI19076.3| unnamed protein
product [Vitis vinifera]
Length = 167
Score = 187 bits (476), Expect = 3e-45
Identities = 92/141 (65%), Positives = 115/141 (81%)
Frame = +2
Query: 200 PTTISNVSSKKSQKIPRLNIRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILLDLQL 379
P+ + S+ K L+I+CARVGGVEIPN KR+E SLQYIHGIGR+R+++IL DL +
Sbjct: 25 PSNNLSFSTPAPPKFGGLSIKCARVGGVEIPNSKRVEYSLQYIHGIGRSRSKQILCDLGM 84
Query: 380 ENKRTKDLSQDELIKLRKEVTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLPCRGQ 559
ENK TKDLS++ELI LR EV++Y IEGDLRRFN IR+L EI+ YRG RH++GLPCRGQ
Sbjct: 85 ENKITKDLSEEELITLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQ 144
Query: 560 RTRNNCRTLKGRRISVAKKKK 622
RT+NNCRTLKG+R+S+A KKK
Sbjct: 145 RTKNNCRTLKGKRVSIAGKKK 165
>ref|NP_568299.1| 30S ribosomal protein S13 [Arabidopsis thaliana]
gi|1173194|sp|P42732.1|RR13_ARATH RecName: Full=30S
ribosomal protein S13, chloroplastic; AltName:
Full=CS13; Flags: Precursor gi|16767|emb|CAA79013.1|
chloroplast 30S ribosomal protein S13 [Arabidopsis
thaliana] gi|662869|emb|CAA88028.1| chloroplast
ribosomal protein S13 [Arabidopsis thaliana]
gi|1107483|emb|CAA63021.1| 30S ribosomal protein S13
[Arabidopsis thaliana] gi|1515107|emb|CAA60413.1|
plastid ribosomal protein S13 [Arabidopsis thaliana]
gi|14517397|gb|AAK62589.1| AT5g14320/F18O22_110
[Arabidopsis thaliana] gi|15450549|gb|AAK96452.1|
AT5g14320/F18O22_110 [Arabidopsis thaliana]
gi|332004633|gb|AED92016.1| 30S ribosomal protein S13
[Arabidopsis thaliana]
Length = 169
Score = 187 bits (475), Expect = 5e-45
Identities = 94/137 (68%), Positives = 116/137 (84%)
Frame = +2
Query: 212 SNVSSKKSQKIPRLNIRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILLDLQLENKR 391
SN +K+S L+IRCARVGGVEIP KRIE SLQYIHGIGRTRAR+IL+DLQ+ENK
Sbjct: 35 SNTPNKQS-----LSIRCARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQMENKI 89
Query: 392 TKDLSQDELIKLRKEVTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRN 571
TKD++++ELI LR EV++Y IEGDLRRFN I++L EI+ YRG RH++GLPCRGQRT+N
Sbjct: 90 TKDMAEEELIILRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKN 149
Query: 572 NCRTLKGRRISVAKKKK 622
NCRTLKG++I++A KKK
Sbjct: 150 NCRTLKGKKIAIAGKKK 166
>ref|XP_004290827.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 167
Score = 187 bits (475), Expect = 5e-45
Identities = 94/140 (67%), Positives = 116/140 (82%)
Frame = +2
Query: 203 TTISNVSSKKSQKIPRLNIRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILLDLQLE 382
TT+S + K K+ L+IRC RVGGVEIPN KR+E SLQY+HGIGRTRAR IL DL++E
Sbjct: 27 TTLS-LPIKTPTKVGGLSIRCVRVGGVEIPNNKRVEFSLQYVHGIGRTRARTILNDLKME 85
Query: 383 NKRTKDLSQDELIKLRKEVTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLPCRGQR 562
NK TKDLS++EL +R+EV++Y IEGDLRRFN NIR+L EI+ YRG RH++GLPCRGQR
Sbjct: 86 NKVTKDLSEEELTIIREEVSKYMIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQR 145
Query: 563 TRNNCRTLKGRRISVAKKKK 622
T+NN RTLKG+R++VA KKK
Sbjct: 146 TKNNTRTLKGKRVTVAGKKK 165
>ref|XP_004500599.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Cicer
arietinum]
Length = 164
Score = 186 bits (473), Expect = 8e-45
Identities = 89/128 (69%), Positives = 110/128 (85%)
Frame = +2
Query: 239 KIPRLNIRCARVGGVEIPNQKRIETSLQYIHGIGRTRARKILLDLQLENKRTKDLSQDEL 418
K+ RL+I C RVGGVEIPN KRIE SLQYIHG+GR RAR IL D+Q+ENK TK+LS++EL
Sbjct: 36 KVQRLSIVCVRVGGVEIPNNKRIEFSLQYIHGVGRNRARTILSDIQMENKVTKELSEEEL 95
Query: 419 IKLRKEVTEYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRNNCRTLKGRR 598
I LR+EV++Y EGDLRRFN NI++L EI+ YRG RH++GLPCRGQRT+NNCRTLKG++
Sbjct: 96 IILREEVSKYTTEGDLRRFNALNIKRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKK 155
Query: 599 ISVAKKKK 622
++VA KKK
Sbjct: 156 VTVAGKKK 163
>ref|XP_006399943.1| hypothetical protein EUTSA_v10014848mg [Eutrema salsugineum]
gi|557101033|gb|ESQ41396.1| hypothetical protein
EUTSA_v10014848mg [Eutrema salsugineum]
Length = 169
Score = 186 bits (471), Expect = 1e-44
Identities = 94/163 (57%), Positives = 125/163 (76%)
Frame = +2
Query: 134 IARAPTIVSFYNNKKSCQVSSKPTTISNVSSKKSQKIPRLNIRCARVGGVEIPNQKRIET 313
+A + +++ + S ++ SN K+S L+IR ARVGGVEIP+ KRIE
Sbjct: 9 VAHSLSLICNWTKSNSLSRNTLALPASNAPKKQS-----LSIRSARVGGVEIPSNKRIEY 63
Query: 314 SLQYIHGIGRTRARKILLDLQLENKRTKDLSQDELIKLRKEVTEYEIEGDLRRFNDTNIR 493
SLQYIHGIGRTRAR+IL+DLQ+ENK TKD++++ELI LR EV++Y IEGDLRRFN I+
Sbjct: 64 SLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNALAIK 123
Query: 494 KLIEIRSYRGRRHMRGLPCRGQRTRNNCRTLKGRRISVAKKKK 622
+L EI+ YRG RH++GLPCRGQRT+NNCRTLKG+++++A KKK
Sbjct: 124 RLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 166
>gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi]
gi|169635172|gb|ACA58361.1| 30S ribosomal protein S13-2
[Arachis diogoi]
Length = 121
Score = 185 bits (470), Expect = 2e-44
Identities = 88/120 (73%), Positives = 106/120 (88%)
Frame = +2
Query: 263 CARVGGVEIPNQKRIETSLQYIHGIGRTRARKILLDLQLENKRTKDLSQDELIKLRKEVT 442
CARVGGVEIPN KRIE SLQYIHGIGR+RARKIL D+ ++NK TKDLS++ELI LR EV+
Sbjct: 1 CARVGGVEIPNNKRIEFSLQYIHGIGRSRARKILCDISMDNKVTKDLSEEELITLRDEVS 60
Query: 443 EYEIEGDLRRFNDTNIRKLIEIRSYRGRRHMRGLPCRGQRTRNNCRTLKGRRISVAKKKK 622
+Y IEGDLRRFN NIR+L EI+ YRG RH++GLPCRGQRT+NNCRTLKG+++++A KKK
Sbjct: 61 KYVIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 120