BLASTX nr result

ID: Ephedra28_contig00002086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002086
         (628 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16884.1| unknown [Picea sitchensis]                              62   2e-07
gb|ACA04882.1| putative CCCH-type zinc finger protein [Picea abies]    57   3e-06

>gb|ABR16884.1| unknown [Picea sitchensis]
          Length = 581

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 29/58 (50%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +1

Query: 220 SEFHNGFDDLYRVDEEPVQRVESGRDLRAKIYARLAAQNNPDLDS-TPDLAWVNELVQ 390
           S +   ++  +   EEP+QRVESGR+LRAKIY+RL+ +N  ++++ +PDL WVNELV+
Sbjct: 524 SRWEKNWESDFFAQEEPLQRVESGRELRAKIYSRLSRENPDNINAESPDLGWVNELVK 581


>gb|ACA04882.1| putative CCCH-type zinc finger protein [Picea abies]
          Length = 97

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 4/47 (8%)
 Frame = +1

Query: 262 EEPVQRVESGRDLRAKIYARLAAQN----NPDLDSTPDLAWVNELVQ 390
           EEPVQRVESG+DLRAKIYARL  +N    +     +PD+ WVNELV+
Sbjct: 51  EEPVQRVESGKDLRAKIYARLTRENVLQDSSSSVESPDVGWVNELVK 97


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