BLASTX nr result

ID: Ephedra28_contig00002085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00002085
         (649 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16884.1| unknown [Picea sitchensis]                              63   9e-08
gb|ACA04882.1| putative CCCH-type zinc finger protein [Picea abies]    58   3e-06

>gb|ABR16884.1| unknown [Picea sitchensis]
          Length = 581

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +1

Query: 220 SEFHNGFEDLYGVDEEPVQRVESGRDLRAKIYARLAAQNNPDLDS-TPDLAWVNELVQ 390
           S +   +E  +   EEP+QRVESGR+LRAKIY+RL+ +N  ++++ +PDL WVNELV+
Sbjct: 524 SRWEKNWESDFFAQEEPLQRVESGRELRAKIYSRLSRENPDNINAESPDLGWVNELVK 581


>gb|ACA04882.1| putative CCCH-type zinc finger protein [Picea abies]
          Length = 97

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
 Frame = +1

Query: 241 EDLYGVDEEPVQRVESGRDLRAKIYARLAAQN----NPDLDSTPDLAWVNELVQ 390
           ED     EEPVQRVESG+DLRAKIYARL  +N    +     +PD+ WVNELV+
Sbjct: 44  EDAGAWFEEPVQRVESGKDLRAKIYARLTRENVLQDSSSSVESPDVGWVNELVK 97


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