BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00001854
         (521 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528177.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_006427081.1| hypothetical protein CICLE_v10024985mg [Citr...    65   9e-09
gb|EOY26686.1| CASC3/Barentsz eIF4AIII binding, putative isoform...    63   4e-08
gb|EOY26685.1| CASC3/Barentsz eIF4AIII binding, putative isoform...    63   4e-08
gb|EOY26684.1| CASC3/Barentsz eIF4AIII binding, putative isoform...    63   4e-08
gb|EOY26683.1| CASC3/Barentsz eIF4AIII binding, putative isoform...    63   4e-08
gb|EOY26682.1| CASC3/Barentsz eIF4AIII binding, putative isoform...    63   4e-08
gb|EOY26680.1| CASC3/Barentsz eIF4AIII binding, putative isoform...    63   4e-08
ref|NP_001168841.1| uncharacterized protein LOC100382646 [Zea ma...    60   3e-07
emb|CBI36172.3| unnamed protein product [Vitis vinifera]               60   4e-07
emb|CAN71825.1| hypothetical protein VITISV_013840 [Vitis vinifera]    60   4e-07
gb|EXC25803.1| hypothetical protein L484_019437 [Morus notabilis]      56   6e-06
gb|AFW83163.1| hypothetical protein ZEAMMB73_262099 [Zea mays] g...    55   1e-05
ref|XP_002455883.1| hypothetical protein SORBIDRAFT_03g026810 [S...    55   1e-05
gb|ACG27581.1| hypothetical protein [Zea mays] gi|413950517|gb|A...    55   1e-05
ref|NP_001130337.1| uncharacterized protein LOC100191432 [Zea ma...    55   1e-05

>ref|XP_002528177.1| conserved hypothetical protein [Ricinus communis]
           gi|223532389|gb|EEF34184.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 683

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
 Frame = +3

Query: 147 RKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIV-----SSSLNSASPPFYPSG 311
           + Q P   +     +F K  H + SG V+    N   + V     +SSL+SASPPFYPSG
Sbjct: 265 QSQPPLTQNKQAEKSFEKTSHGS-SGRVFTPASNTESDQVPPARKNSSLSSASPPFYPSG 323

Query: 312 -SQQDISATVKKD-QRGIAAGNASHSVLKVDEQISSSNASSVGNGRNIVSTRGQPQVYAE 485
            S +D++ T K+D Q G  + N   SV  VDE  S   AS++  G+NI  + G  ++Y +
Sbjct: 324 SSNKDVTLTQKRDVQVGSTSRNPPTSV--VDESFSMQQASALMRGKNIADSIGVDKLYID 381

Query: 486 QSQRTFEKQPMN 521
            S  +   +P+N
Sbjct: 382 DSVNSTAGKPLN 393


>ref|XP_006427081.1| hypothetical protein CICLE_v10024985mg [Citrus clementina]
           gi|567868921|ref|XP_006427082.1| hypothetical protein
           CICLE_v10024985mg [Citrus clementina]
           gi|557529071|gb|ESR40321.1| hypothetical protein
           CICLE_v10024985mg [Citrus clementina]
           gi|557529072|gb|ESR40322.1| hypothetical protein
           CICLE_v10024985mg [Citrus clementina]
          Length = 737

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E A + S H      KQ  KP++     N  +    T +     D  + R+   +SSL+S
Sbjct: 330 EPARKNSNHAPPPRNKQLGKPLEKTSHTNSGRAFTPTSNSE--SDTASNRKQAFASSLSS 387

Query: 285 ASPPFYPSG-SQQDISATVKKD-QRGIAAGNASHSVLKVDEQISSSNASSVGNGRNI 449
           ASPPFYPSG S +DI+ T KKD Q G  + N  +S   +DE +S  +A+++  G+NI
Sbjct: 388 ASPPFYPSGSSNKDINLTHKKDVQSGSTSRNLRNS--SIDESLSVQHANTMQRGKNI 442


>gb|EOY26686.1| CASC3/Barentsz eIF4AIII binding, putative isoform 7 [Theobroma
           cacao]
          Length = 498

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E  V+ S        K + KP++     N ++ +  T + +        R+++ +SSL+S
Sbjct: 102 EPTVKNSSQAPPTQNKLSGKPLEKTSQANSSRAL--TPATNADTTSVPARKHVFASSLSS 159

Query: 285 ASPPFYPSG-SQQDISATVKKD-QRGIAAGNASHSVLKVDEQISSSNASSVGNGRNIVST 458
           ASPPFYPSG S +DI+ T KKD Q G  + N   SV   +  +S SN+     G+N++ +
Sbjct: 160 ASPPFYPSGSSNKDITLTPKKDVQTGSVSRNLRPSVTDDNSSVSQSNSL---RGKNVLDS 216

Query: 459 RGQPQVYAEQSQRTFEKQPM 518
               ++Y + S  +   +P+
Sbjct: 217 LSMAKLYIDDSSTSASGKPL 236


>gb|EOY26685.1| CASC3/Barentsz eIF4AIII binding, putative isoform 6 [Theobroma
           cacao]
          Length = 523

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E  V+ S        K + KP++     N ++ +  T + +        R+++ +SSL+S
Sbjct: 102 EPTVKNSSQAPPTQNKLSGKPLEKTSQANSSRAL--TPATNADTTSVPARKHVFASSLSS 159

Query: 285 ASPPFYPSG-SQQDISATVKKD-QRGIAAGNASHSVLKVDEQISSSNASSVGNGRNIVST 458
           ASPPFYPSG S +DI+ T KKD Q G  + N   SV   +  +S SN+     G+N++ +
Sbjct: 160 ASPPFYPSGSSNKDITLTPKKDVQTGSVSRNLRPSVTDDNSSVSQSNSL---RGKNVLDS 216

Query: 459 RGQPQVYAEQSQRTFEKQPM 518
               ++Y + S  +   +P+
Sbjct: 217 LSMAKLYIDDSSTSASGKPL 236


>gb|EOY26684.1| CASC3/Barentsz eIF4AIII binding, putative isoform 5 [Theobroma
           cacao]
          Length = 687

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E  V+ S        K + KP++     N ++ +  T + +        R+++ +SSL+S
Sbjct: 291 EPTVKNSSQAPPTQNKLSGKPLEKTSQANSSRAL--TPATNADTTSVPARKHVFASSLSS 348

Query: 285 ASPPFYPSG-SQQDISATVKKD-QRGIAAGNASHSVLKVDEQISSSNASSVGNGRNIVST 458
           ASPPFYPSG S +DI+ T KKD Q G  + N   SV   +  +S SN+     G+N++ +
Sbjct: 349 ASPPFYPSGSSNKDITLTPKKDVQTGSVSRNLRPSVTDDNSSVSQSNSL---RGKNVLDS 405

Query: 459 RGQPQVYAEQSQRTFEKQPM 518
               ++Y + S  +   +P+
Sbjct: 406 LSMAKLYIDDSSTSASGKPL 425


>gb|EOY26683.1| CASC3/Barentsz eIF4AIII binding, putative isoform 4 [Theobroma
           cacao]
          Length = 522

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E  V+ S        K + KP++     N ++ +  T + +        R+++ +SSL+S
Sbjct: 102 EPTVKNSSQAPPTQNKLSGKPLEKTSQANSSRAL--TPATNADTTSVPARKHVFASSLSS 159

Query: 285 ASPPFYPSG-SQQDISATVKKD-QRGIAAGNASHSVLKVDEQISSSNASSVGNGRNIVST 458
           ASPPFYPSG S +DI+ T KKD Q G  + N   SV   +  +S SN+     G+N++ +
Sbjct: 160 ASPPFYPSGSSNKDITLTPKKDVQTGSVSRNLRPSVTDDNSSVSQSNSL---RGKNVLDS 216

Query: 459 RGQPQVYAEQSQRTFEKQPM 518
               ++Y + S  +   +P+
Sbjct: 217 LSMAKLYIDDSSTSASGKPL 236


>gb|EOY26682.1| CASC3/Barentsz eIF4AIII binding, putative isoform 3 [Theobroma
           cacao]
          Length = 706

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E  V+ S        K + KP++     N ++ +  T + +        R+++ +SSL+S
Sbjct: 291 EPTVKNSSQAPPTQNKLSGKPLEKTSQANSSRAL--TPATNADTTSVPARKHVFASSLSS 348

Query: 285 ASPPFYPSG-SQQDISATVKKD-QRGIAAGNASHSVLKVDEQISSSNASSVGNGRNIVST 458
           ASPPFYPSG S +DI+ T KKD Q G  + N   SV   +  +S SN+     G+N++ +
Sbjct: 349 ASPPFYPSGSSNKDITLTPKKDVQTGSVSRNLRPSVTDDNSSVSQSNSL---RGKNVLDS 405

Query: 459 RGQPQVYAEQSQRTFEKQPM 518
               ++Y + S  +   +P+
Sbjct: 406 LSMAKLYIDDSSTSASGKPL 425


>gb|EOY26680.1| CASC3/Barentsz eIF4AIII binding, putative isoform 1 [Theobroma
           cacao] gi|508779425|gb|EOY26681.1| CASC3/Barentsz
           eIF4AIII binding, putative isoform 1 [Theobroma cacao]
          Length = 711

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E  V+ S        K + KP++     N ++ +  T + +        R+++ +SSL+S
Sbjct: 291 EPTVKNSSQAPPTQNKLSGKPLEKTSQANSSRAL--TPATNADTTSVPARKHVFASSLSS 348

Query: 285 ASPPFYPSG-SQQDISATVKKD-QRGIAAGNASHSVLKVDEQISSSNASSVGNGRNIVST 458
           ASPPFYPSG S +DI+ T KKD Q G  + N   SV   +  +S SN+     G+N++ +
Sbjct: 349 ASPPFYPSGSSNKDITLTPKKDVQTGSVSRNLRPSVTDDNSSVSQSNSL---RGKNVLDS 405

Query: 459 RGQPQVYAEQSQRTFEKQPM 518
               ++Y + S  +   +P+
Sbjct: 406 LSMAKLYIDDSSTSASGKPL 425


>ref|NP_001168841.1| uncharacterized protein LOC100382646 [Zea mays]
           gi|238007666|gb|ACR34868.1| unknown [Zea mays]
          Length = 708

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E   R S  V    RKQA +  + +P  N     ++ Q     Q+    ++N++SSSLNS
Sbjct: 296 EAVARSSREVVGSQRKQAARFREPVP--NAAAARNSGQVSHAQQEAAPPKKNVISSSLNS 353

Query: 285 ASPPFYPSGSQ-QDIS-ATVKKDQRGIAAGNASHSVLKVDEQISSSNASSVGNGRNIVST 458
           ASPPFYPSG+  QD   AT ++D +   +     S +K+D+  S   + S+  GR  +  
Sbjct: 354 ASPPFYPSGAACQDFPVATQRRDIQTGGSNKIPPSSMKMDDN-SILQSGSMVRGRTAMDY 412

Query: 459 RGQPQVYAEQSQRT 500
            G+ + +A+   R+
Sbjct: 413 GGRDRFHADGPVRS 426


>emb|CBI36172.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
 Frame = +3

Query: 147 RKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNL-------RRNIVSSSLNSASPPFYP 305
           R ++  P  +  S    +K  ++ SG  +    N+       R+++ +SSL+SASPPFYP
Sbjct: 214 RYKSETPTQNKQSGKSFEKASHSSSGRAFTPTSNVASDPIPTRKHVFASSLSSASPPFYP 273

Query: 306 SG-SQQDISATVKKD-QRGIAAGNASHSVLKVDEQISSSNASSVGNGRNIVSTRGQPQVY 479
           SG S ++IS T K+D   G    N   SV   +E   +S + ++  G+NIV + G  ++Y
Sbjct: 274 SGSSNKEISLTQKRDLHTGTTNRNIRPSV--AEESFGTSQSGALPRGKNIVDSVGMDKLY 331

Query: 480 AEQS 491
            + S
Sbjct: 332 IDDS 335


>emb|CAN71825.1| hypothetical protein VITISV_013840 [Vitis vinifera]
          Length = 603

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
 Frame = +3

Query: 144 PRKQAPKPMDSIPSNNFNKKIHN------TQSGSVYQDGGNLRRNIVSSSLNSASPPFYP 305
           PR+  P         +F K  H+      T + +V  D    R+++ +SSL+SASPPFYP
Sbjct: 183 PRRYEPPARSG---KSFEKASHSSSGRAFTPTSNVASDPIPTRKHVFASSLSSASPPFYP 239

Query: 306 SG-SQQDISATVKKD-QRGIAAGNASHSVLKVDEQISSSNASSVGNGRNIVSTRGQPQVY 479
           SG S ++IS T K+D   G    N   SV   +E   +S + ++  G+NIV + G  ++Y
Sbjct: 240 SGSSNKEISLTQKRDLHTGTTNRNIRPSV--AEESFGTSQSGALPRGKNIVDSVGMDKLY 297

Query: 480 AEQS 491
            + S
Sbjct: 298 IDDS 301


>gb|EXC25803.1| hypothetical protein L484_019437 [Morus notabilis]
          Length = 686

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
 Frame = +3

Query: 9   RSNRSRMYSDMTAPTYVXXXXXXXXXXXXXQQEVAVRRSEHVTDRPRKQAPKPMDSIPSN 188
           R NRS+ Y++ T  + V             + E   + S        KQ+ KP +  PSN
Sbjct: 232 RGNRSKTYNNSTNQSQVSKGVRGKGVR---KYEPMTKNSALAPSTLNKQSRKPTEK-PSN 287

Query: 189 NFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNSASPPFYPSG-SQQDISATVKKD 347
             + +     S + + D    R+N+ +SSLNSASPPFYPSG S +DIS T K+D
Sbjct: 288 TNSARAFAPASNAEF-DQVPARKNVFASSLNSASPPFYPSGSSNKDISLTHKRD 340


>gb|AFW83163.1| hypothetical protein ZEAMMB73_262099 [Zea mays]
           gi|413950515|gb|AFW83164.1| hypothetical protein
           ZEAMMB73_262099 [Zea mays]
          Length = 685

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E A R +  V    RKQA +  +S P  N      + Q      +    +RN++SSSLNS
Sbjct: 288 EAAARNNREVVGSQRKQAARFRESAP--NAVAARDSGQVSHAQPEAAPPKRNVMSSSLNS 345

Query: 285 ASPPFYP-SGSQQDISATVKKDQRGIAAGNASH---SVLKVDEQISSSNASSVGNGRNIV 452
           ASPPFYP S S QD    V    R I AG ++    S +K+D+  S   + S+  GR  +
Sbjct: 346 ASPPFYPSSASTQDF--PVAAQTRDIQAGGSNKIPPSSMKMDDN-SKLQSGSMVRGRIAM 402

Query: 453 STRGQPQVYAE 485
              G+ ++ A+
Sbjct: 403 DYGGRDKLLAD 413


>ref|XP_002455883.1| hypothetical protein SORBIDRAFT_03g026810 [Sorghum bicolor]
           gi|241927858|gb|EES01003.1| hypothetical protein
           SORBIDRAFT_03g026810 [Sorghum bicolor]
          Length = 713

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E   R S  V    RKQA +  +  P+ N      + Q      +    ++N++SSSLNS
Sbjct: 301 EAVARNSREVVGSQRKQAARFRE--PAPNAAAARDSGQVSHAQPEAAPPKKNVISSSLNS 358

Query: 285 ASPPFYPSG-SQQDISATVKKDQRGIAAGNASH---SVLKVDEQISSSNASSVGNGRNIV 452
           ASPPFYPSG + QD    V   +R I  G ++    S +K+D+  S   + S+  GR  +
Sbjct: 359 ASPPFYPSGAATQDF--PVAAQRRDIQTGGSNKIPPSSMKMDDN-SKLQSGSMVRGRTSM 415

Query: 453 STRGQPQVYAEQSQRT 500
              G+ + +A+   R+
Sbjct: 416 DYGGRDRFHADGPVRS 431


>gb|ACG27581.1| hypothetical protein [Zea mays] gi|413950517|gb|AFW83166.1|
           hypothetical protein ZEAMMB73_262099 [Zea mays]
          Length = 483

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E A R +  V    RKQA +  +S P  N      + Q      +    +RN++SSSLNS
Sbjct: 86  EAAARNNREVVGSQRKQAARFRESAP--NAVAARDSGQVSHAQPEAAPPKRNVMSSSLNS 143

Query: 285 ASPPFYP-SGSQQDISATVKKDQRGIAAGNASH---SVLKVDEQISSSNASSVGNGRNIV 452
           ASPPFYP S S QD    V    R I AG ++    S +K+D+  S   + S+  GR  +
Sbjct: 144 ASPPFYPSSASTQDF--PVAAQTRDIQAGGSNKIPPSSMKMDDN-SKLQSGSMVRGRIAM 200

Query: 453 STRGQPQVYAE 485
              G+ ++ A+
Sbjct: 201 DYGGRDKLLAD 211


>ref|NP_001130337.1| uncharacterized protein LOC100191432 [Zea mays]
           gi|194688880|gb|ACF78524.1| unknown [Zea mays]
          Length = 530

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
 Frame = +3

Query: 105 EVAVRRSEHVTDRPRKQAPKPMDSIPSNNFNKKIHNTQSGSVYQDGGNLRRNIVSSSLNS 284
           E A R +  V    RKQA +  +S P  N      + Q      +    +RN++SSSLNS
Sbjct: 133 EAAARNNREVVGSQRKQAARFRESAP--NAVAARDSGQVSHAQPEAAPPKRNVMSSSLNS 190

Query: 285 ASPPFYP-SGSQQDISATVKKDQRGIAAGNASH---SVLKVDEQISSSNASSVGNGRNIV 452
           ASPPFYP S S QD    V    R I AG ++    S +K+D+  S   + S+  GR  +
Sbjct: 191 ASPPFYPSSASTQDF--PVAAQTRDIQAGGSNKIPPSSMKMDDN-SKLQSGSMVRGRIAM 247

Query: 453 STRGQPQVYAE 485
              G+ ++ A+
Sbjct: 248 DYGGRDKLLAD 258