BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00001822
         (1641 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17075.1| unknown [Picea sitchensis]                             306   1e-80
gb|ABR16339.1| unknown [Picea sitchensis]                             286   2e-74
gb|ABR18008.1| unknown [Picea sitchensis] gi|224286448|gb|ACN409...   263   2e-67
ref|XP_006471949.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   179   2e-42
ref|XP_006433262.1| hypothetical protein CICLE_v10001478mg [Citr...   179   2e-42
ref|XP_006827939.1| hypothetical protein AMTR_s00008p00185200 [A...   174   1e-40
gb|EXB56540.1| E3 ubiquitin-protein ligase ATL6 [Morus notabilis]     170   1e-39
ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   166   2e-38
ref|XP_004302451.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   165   5e-38
ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...   165   6e-38
gb|EOY15349.1| RING/U-box superfamily protein, putative [Theobro...   164   8e-38
emb|CBI36742.3| unnamed protein product [Vitis vinifera]              163   2e-37
tpg|DAA61870.1| TPA: putative RING zinc finger domain superfamil...   161   9e-37
gb|ACN37076.1| unknown [Zea mays]                                     161   9e-37
ref|XP_002462520.1| hypothetical protein SORBIDRAFT_02g027200 [S...   160   2e-36
ref|XP_003578264.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   159   3e-36
ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea ...   159   3e-36
ref|XP_003591073.1| RING finger family protein [Medicago truncat...   159   3e-36
ref|XP_004495745.1| PREDICTED: DNA excision repair protein ERCC-...   159   4e-36
ref|XP_002319561.2| hypothetical protein POPTR_0013s02670g [Popu...   158   7e-36

>gb|ABR17075.1| unknown [Picea sitchensis]
          Length = 466

 Score =  306 bits (785), Expect = 1e-80
 Identities = 190/426 (44%), Positives = 242/426 (56%), Gaps = 6/426 (1%)
 Frame = -3

Query: 1636 NDTHSHDKYSDDDYLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCT--EDSSTTGRR 1463
            N +   D  SD     N +FNPSMAIIIVVLL+AFFFMGFFS+YVRRC   +DS    R+
Sbjct: 43   NSSAPSDNNSDPYGGLNNRFNPSMAIIIVVLLSAFFFMGFFSIYVRRCAGEDDSFRASRQ 102

Query: 1462 RVGPGNGLGRLEP-APRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQ 1286
                 N   R +     GLD+ VIESFPVF+YDL+KGLK QTKE +ECAVCLN+F DDEQ
Sbjct: 103  GARGANAQARRQDDGTHGLDRAVIESFPVFSYDLVKGLKAQTKETLECAVCLNEFEDDEQ 162

Query: 1285 LRLLPKCGHAFHPECIDMWLSSNTTCPVCRTSLVPDDMTNPTGTGFGVIE-PVIEPVEDA 1109
            LRLLPKC HAFHPECIDMWL S+TTCPVCRTSLVP D  NPTGT +G+IE P I P ++ 
Sbjct: 163  LRLLPKCSHAFHPECIDMWLFSHTTCPVCRTSLVPTDDANPTGTDYGIIEPPEITPPDEI 222

Query: 1108 PEIGVPIGSMSRRTVGFSLPTSNEGSVXXXXXXXXXXXXXXXXRVPEPKVIENSESPITE 929
              +       SRR        + E                     P    + +S+ P+  
Sbjct: 223  TVVVDGTRGSSRRNGSLRRDNAVES--------------------PAASEMADSQEPLRV 262

Query: 928  EGPRNS-NLSRSYSTGHSLVRLRKDMGEEKSTEWFISTPKGLTPASHKTCTYAINQAMAL 752
             G   +    RS+STGHSLVRL KD+ ++ +TEW+IST +GLTP  H+ C+         
Sbjct: 263  MGLNQAKKFRRSHSTGHSLVRLPKDL-DQSATEWYISTAEGLTPGLHRNCSLTARP---- 317

Query: 751  HSKSQGYNIGASKFSRFPFFSKQLSFVRDGGQQQQTAELQNSGSIRRWYEKRFKSERDS- 575
            HS+SQ      S+    P  +KQ S        +       +GS  RWYE+  +SER S 
Sbjct: 318  HSRSQRSLASKSR----PALAKQDSLRGAASFSEDAGTSSGTGSGLRWYERGLRSERLSL 373

Query: 574  TEMDPANFRRSLSERTGVASDCVFNPEGYNPQSHEHQEDAAKAYILNLKKTLKRITGLDD 395
            + M+P++F R+ SE    +         Y   S   Q++  KAY+ +LK TLKR+TG D 
Sbjct: 374  SSMNPSSFLRTHSEHRAPSY------SRYQDSSAGSQQE-QKAYLQSLKSTLKRLTGRDR 426

Query: 394  ESPSSS 377
            E   +S
Sbjct: 427  EWTDNS 432


>gb|ABR16339.1| unknown [Picea sitchensis]
          Length = 467

 Score =  286 bits (732), Expect = 2e-74
 Identities = 193/468 (41%), Positives = 252/468 (53%), Gaps = 7/468 (1%)
 Frame = -3

Query: 1636 NDTHSHDKYSDDDYLN-NTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRC-TEDSSTTGR- 1466
            ++++S    +DD Y   N +F+PSMAI++V L+ A FFM  FS+  R+C +ED S  G  
Sbjct: 46   DNSNSPPDNNDDLYGGFNARFSPSMAIVLVGLVGACFFMACFSICFRKCASEDESLRGAN 105

Query: 1465 ---RRVGPGNGLGRLEPAPRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFAD 1295
               RR   GN         RGLD+ VIESFPVF+YDL+KGLK QTKE +ECAVCL++F D
Sbjct: 106  AQARRQNEGN---------RGLDRAVIESFPVFSYDLVKGLKAQTKETLECAVCLSEFED 156

Query: 1294 DEQLRLLPKCGHAFHPECIDMWLSSNTTCPVCRTSLVPDDMTNPTGTGFGVIEPVIEPVE 1115
            DEQLRLLPKC HAFHP+CID WL S+TTCPVCRTSL P D  NPTGTG+G+IEP      
Sbjct: 157  DEQLRLLPKCSHAFHPDCIDTWLFSHTTCPVCRTSLAPADDGNPTGTGYGIIEP------ 210

Query: 1114 DAPEIGVPIGSMSRRTVGFSLPTSNEGSVXXXXXXXXXXXXXXXXRVPEPKVIENSESPI 935
              PEI           V   +  +  GSV                    P+  ++ ES  
Sbjct: 211  --PEI------TPSYEVAVVVDGARNGSVRRDNIVETPMA---------PESADSQESLY 253

Query: 934  TEEGPRNSNLSRSYSTGHSLVRLRKDMGEEKSTEWFISTPKGLTPASHKTCTYAINQAMA 755
                       RSYSTGHSLVRLRKDM ++ +TEW+I T +GL P   + C+        
Sbjct: 254  VLGFDEGKKFRRSYSTGHSLVRLRKDM-DQLATEWYICTAEGLKPGLQRNCSL----TAL 308

Query: 754  LHSKSQGYNIGASKFSRFPFFSKQLSFVRDGGQQQQTAELQNSGSIRRWYEKRFKSER-D 578
             HS+SQG +    +    P FSKQ S        + T      GS RRWYE+  +SER  
Sbjct: 309  SHSRSQGPSTSEIR----PGFSKQASISGTASCSRDT-----GGSGRRWYERGLRSERLT 359

Query: 577  STEMDPANFRRSLSERTGVASDCVFNPEGYNPQSHEHQEDAAKAYILNLKKTLKRITGLD 398
             + M P++F RS SE+  +A       +  N +S    +   K Y+ +LK TLKR+TG D
Sbjct: 360  ISSMYPSSFLRSYSEQRTLA-------DSRNQESSAGSQQERKVYLQSLKHTLKRLTGRD 412

Query: 397  DESPSSSNTVVASPVIAGGSVSAKGIVKAGSL*NWGSSIAAINLSPLG 254
             E   +S         +G   S + +  + S   WGSS  A++ S  G
Sbjct: 413  REWADNSQ--------SGWGSSRRAVDNSQS--GWGSSRRAVDNSQSG 450


>gb|ABR18008.1| unknown [Picea sitchensis] gi|224286448|gb|ACN40931.1| unknown [Picea
            sitchensis]
          Length = 385

 Score =  263 bits (672), Expect = 2e-67
 Identities = 159/361 (44%), Positives = 212/361 (58%), Gaps = 4/361 (1%)
 Frame = -3

Query: 1588 NTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPGNGLGR---LEPAP 1418
            N  FNPS+AIII+VLL+A F +GFFS+Y RR T++  +  R R  P   + +    + + 
Sbjct: 62   NGHFNPSLAIIIIVLLSALFMVGFFSIYFRRRTDEDDSMRRSRRRPRGVIPQGWWEDDST 121

Query: 1417 RGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPECI 1238
             GLD++VIESFPVF+YDL+KGLK QTKE +EC VCL+ F DDE LRLLPKC HAFHP+CI
Sbjct: 122  GGLDRDVIESFPVFSYDLVKGLKAQTKETLECPVCLSQFEDDELLRLLPKCSHAFHPDCI 181

Query: 1237 DMWLSSNTTCPVCRTSLVPDDMTNPTGTGFGVIEPVIEPVEDAPEIGVPIGSMSRRTVGF 1058
            D WL S+TTCP+CR  LVP D  NPTGTG+G+IEP+   V    E+ V +          
Sbjct: 182  DTWLFSHTTCPICRIILVPTDDENPTGTGYGIIEPL--EVTPPDEVTVVVDGTRSSWRNG 239

Query: 1057 SLPTSNEGSVXXXXXXXXXXXXXXXXRVPEPKVIENSESPITEEGPRNSNLSRSYSTGHS 878
            S+   N+                    V   K  ++ E P    G + +  SRS+STGHS
Sbjct: 240  SVRRDND----------------IDTTVASEKA-DSHELP----GDQATEFSRSHSTGHS 278

Query: 877  LVRLRKDMGEEKSTEWFISTPKGLTPASHKTCTYAINQAMALHSKSQGYNIGASKFSRFP 698
            LVRLRK+M ++  TEW++ T +GL P  H+ C+     A++ HS+SQG +   ++    P
Sbjct: 279  LVRLRKEM-DQSGTEWYVHTAEGLKPGLHRNCS---RNALS-HSRSQGPSTSETR----P 329

Query: 697  FFSKQLSFVRDGGQQQQTAELQNSGSIRRWYEKRFKSER-DSTEMDPANFRRSLSERTGV 521
              SKQ S   +    Q T      GS RRWYE+  +SER   + M P++F RS SE    
Sbjct: 330  ALSKQTSKNGNASCSQDT-----GGSGRRWYERGLRSERLTISSMYPSSFLRSFSEHRAP 384

Query: 520  A 518
            A
Sbjct: 385  A 385


>ref|XP_006471949.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Citrus sinensis]
          Length = 443

 Score =  179 bits (455), Expect = 2e-42
 Identities = 132/373 (35%), Positives = 178/373 (47%), Gaps = 10/373 (2%)
 Frame = -3

Query: 1600 DYLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPGNGLGRLEPA 1421
            D  +N KF+PS+AIIIVVL++A FFMGFFS+Y+R C+ DSS +  R  G G    R   A
Sbjct: 105  DPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCS-DSSNSVIRPSGAGGNRSR-RGA 162

Query: 1420 PRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPEC 1241
             RGLD+EVI++FP F Y  +K LK   K  +ECAVCLN+F DDE LRL+PKC H FHPEC
Sbjct: 163  ARGLDREVIDTFPTFVYSDVKTLKVG-KGALECAVCLNEFEDDETLRLIPKCDHVFHPEC 221

Query: 1240 IDMWLSSNTTCPVCRTSLVPD-DMTNPTGTGFGVIEPVIEPVEDAPEIGVPIGSMSRRTV 1064
            ID WL S+TTCPVCR++L  +   T P  +  G  E  +E   DA              V
Sbjct: 222  IDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDA-------------AV 268

Query: 1063 GFSLPTSNEGSVXXXXXXXXXXXXXXXXRVPEPKVIENSESPIT--------EEGPRNSN 908
                P   +                     PEP+VI  + +  T            R   
Sbjct: 269  AAETPQETQPQAQCSQP-------------PEPQVISGNFANQTLNRNRTRGSRSGRPRK 315

Query: 907  LSRSYSTGHSLVRLRKDMGEEKSTEWFISTPKGLTPASHKTCTYAINQAMALHSKSQGYN 728
              RS+STGHSLV+  +D                         T      + +  + Q  N
Sbjct: 316  FPRSHSTGHSLVQPGED-------------------------TERFTLRLPVDVRKQIMN 350

Query: 727  IGASKFSRFPFFSKQLSFVRDGGQQQQTAELQNSGSIRRWYEKRFKSERDSTEMDPANFR 548
               ++ +      ++ S  R G +     E  + G   RW ++ FKS+R    M P  F+
Sbjct: 351  RELNRSNSLVVLPREAS-SRRGYRPGGGGEGSSRGRNTRWLDRSFKSDRWVFSMAPPFFQ 409

Query: 547  RSLS-ERTGVASD 512
            R+ S + T VA+D
Sbjct: 410  RASSLKTTKVAAD 422


>ref|XP_006433262.1| hypothetical protein CICLE_v10001478mg [Citrus clementina]
            gi|557535384|gb|ESR46502.1| hypothetical protein
            CICLE_v10001478mg [Citrus clementina]
          Length = 384

 Score =  179 bits (455), Expect = 2e-42
 Identities = 132/373 (35%), Positives = 178/373 (47%), Gaps = 10/373 (2%)
 Frame = -3

Query: 1600 DYLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPGNGLGRLEPA 1421
            D  +N KF+PS+AIIIVVL++A FFMGFFS+Y+R C+ DSS +  R  G G    R   A
Sbjct: 46   DPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCS-DSSNSVIRPSGAGGNRSR-RGA 103

Query: 1420 PRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPEC 1241
             RGLD+EVI++FP F Y  +K LK   K  +ECAVCLN+F DDE LRL+PKC H FHPEC
Sbjct: 104  ARGLDREVIDTFPTFVYSDVKTLKVG-KGALECAVCLNEFEDDETLRLIPKCDHVFHPEC 162

Query: 1240 IDMWLSSNTTCPVCRTSLVPD-DMTNPTGTGFGVIEPVIEPVEDAPEIGVPIGSMSRRTV 1064
            ID WL S+TTCPVCR++L  +   T P  +  G  E  +E   DA              V
Sbjct: 163  IDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDA-------------AV 209

Query: 1063 GFSLPTSNEGSVXXXXXXXXXXXXXXXXRVPEPKVIENSESPIT--------EEGPRNSN 908
                P   +                     PEP+VI  + +  T            R   
Sbjct: 210  AAETPQETQPQAQCSQP-------------PEPQVISGNFANQTLNRNRTRGSRSGRPRK 256

Query: 907  LSRSYSTGHSLVRLRKDMGEEKSTEWFISTPKGLTPASHKTCTYAINQAMALHSKSQGYN 728
              RS+STGHSLV+  +D                         T      + +  + Q  N
Sbjct: 257  FPRSHSTGHSLVQPGED-------------------------TERFTLRLPVDVRKQIMN 291

Query: 727  IGASKFSRFPFFSKQLSFVRDGGQQQQTAELQNSGSIRRWYEKRFKSERDSTEMDPANFR 548
               ++ +      ++ S  R G +     E  + G   RW ++ FKS+R    M P  F+
Sbjct: 292  RELNRSNSLVVLPREAS-SRRGYRPGGGGEGSSRGRNTRWLDRSFKSDRWVFSMAPPFFQ 350

Query: 547  RSLS-ERTGVASD 512
            R+ S + T VA+D
Sbjct: 351  RASSLKTTKVAAD 363


>ref|XP_006827939.1| hypothetical protein AMTR_s00008p00185200 [Amborella trichopoda]
            gi|548832574|gb|ERM95355.1| hypothetical protein
            AMTR_s00008p00185200 [Amborella trichopoda]
          Length = 391

 Score =  174 bits (440), Expect = 1e-40
 Identities = 104/251 (41%), Positives = 137/251 (54%), Gaps = 7/251 (2%)
 Frame = -3

Query: 1603 DDYLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSST----TGRRRVGPGNGLG 1436
            D Y  N KF+PSMA+I+VVL++AFFFM FFSLY+R+CT D ST    TG+R VG G    
Sbjct: 35   DPYGFNGKFSPSMAVIVVVLISAFFFMAFFSLYIRQCTGDDSTVAPWTGQRNVGGGRSR- 93

Query: 1435 RLEPAPRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHA 1256
                  RGLD  +IE+FP   Y ++KGLK   K  +ECAVCL++F DDE LRL+P C H 
Sbjct: 94   ----RSRGLDPAIIETFPTLVYSVVKGLKIG-KGTLECAVCLSEFEDDESLRLIPNCSHV 148

Query: 1255 FHPECIDMWLSSNTTCPVCRTSLV---PDDMTNPTGTGFGVIEPVIEPVEDAPEIGVPIG 1085
            FHPECID WL+S+ TCP+CR +L    P D   P  +     +P        PE  +P+ 
Sbjct: 149  FHPECIDEWLASHVTCPLCRANLTVPPPPDTKLPENSPDAAEDP-----NPPPEDEIPVV 203

Query: 1084 SMSRRTVGFSLPTSNEGSVXXXXXXXXXXXXXXXXRVPEPKVIENSESPITEEGPRNSNL 905
                 T+    P++ E                       PK +      +T + PR++  
Sbjct: 204  EEITITIDPPAPSAPEPQQNRP-----------------PKRLNRF---LTMKFPRSNKF 243

Query: 904  SRSYSTGHSLV 872
             RS+STGHS V
Sbjct: 244  QRSHSTGHSPV 254


>gb|EXB56540.1| E3 ubiquitin-protein ligase ATL6 [Morus notabilis]
          Length = 344

 Score =  170 bits (431), Expect = 1e-39
 Identities = 89/183 (48%), Positives = 115/183 (62%), Gaps = 3/183 (1%)
 Frame = -3

Query: 1588 NTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPG---NGLGRLEPAP 1418
            N  F+PSMAII+VVL++A FFMGFFS+Y+R C++ +  +    VG G    G+GR   A 
Sbjct: 45   NYSFSPSMAIIVVVLVSALFFMGFFSIYIRHCSDGTQNS----VGVGAVNGGVGRSRRAA 100

Query: 1417 RGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPECI 1238
            RGLD  VIESFP FTY  +KGLK   K  +ECAVCL +F DDE LRL+PKC H FH EC+
Sbjct: 101  RGLDAAVIESFPTFTYSAVKGLKIG-KGALECAVCLCEFEDDETLRLIPKCDHVFHMECV 159

Query: 1237 DMWLSSNTTCPVCRTSLVPDDMTNPTGTGFGVIEPVIEPVEDAPEIGVPIGSMSRRTVGF 1058
            D WL S+TTCPVCR +LVP+   +        IE   + V   PE+   +G    ++   
Sbjct: 160  DTWLESHTTCPVCRANLVPEPGESLHRPELSDIEAQNDAVAPEPELEQQVGEEREQSEAM 219

Query: 1057 SLP 1049
            + P
Sbjct: 220  AAP 222


>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
            vinifera] gi|147843962|emb|CAN83712.1| hypothetical
            protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  166 bits (421), Expect = 2e-38
 Identities = 97/247 (39%), Positives = 131/247 (53%)
 Frame = -3

Query: 1609 SDDDYLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPGNGLGRL 1430
            S+D Y    +F+ SMAIIIV+L+ A F MGFFS+Y+R C+ DS   G  R   G  LGR 
Sbjct: 51   SNDPY-QQQRFSSSMAIIIVILVAALFLMGFFSVYIRHCS-DSRNGGSIRAAAGAALGRS 108

Query: 1429 EPAPRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFH 1250
                RGLD+ V+E+FP F Y ++KGLK   K ++ECAVCLN+F D+E LRL+PKC H FH
Sbjct: 109  RRGTRGLDQAVLETFPTFEYSVVKGLKIG-KGVLECAVCLNEFEDNETLRLIPKCDHVFH 167

Query: 1249 PECIDMWLSSNTTCPVCRTSLVPDDMTNPTGTGFGVIEPVIEPVEDAPEIGVPIGSMSRR 1070
            PECID WL+S+ TCPVCR +L    +           E   E   D  +    I ++   
Sbjct: 168  PECIDAWLASHVTCPVCRANLTEPAVPTDYSAAVEAAESAGESDHDGEDRRSEINAVREV 227

Query: 1069 TVGFSLPTSNEGSVXXXXXXXXXXXXXXXXRVPEPKVIENSESPITEEGPRNSNLSRSYS 890
            ++  +    +E  V                 V  P    +   P   +  R     RS+S
Sbjct: 228  SIRVA---DDETDV------------QQAPDVINPNQSLHQNRPPRSKSTRPRKFPRSHS 272

Query: 889  TGHSLVR 869
            TGHSL++
Sbjct: 273  TGHSLIQ 279


>ref|XP_004302451.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Fragaria vesca
            subsp. vesca]
          Length = 378

 Score =  165 bits (418), Expect = 5e-38
 Identities = 83/143 (58%), Positives = 101/143 (70%)
 Frame = -3

Query: 1603 DDYLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPGNGLGRLEP 1424
            DD     KF+PSMA+IIVVL+ A F MGFFS+Y+R C++  S + R   GP  G  R   
Sbjct: 38   DDPYRYQKFSPSMAVIIVVLVAALFVMGFFSIYIRHCSQPESGSVRAG-GPITGRSR-RG 95

Query: 1423 APRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPE 1244
            A RGLD  VI++FP   Y ++KGLK   K  +ECAVCLN+F DDE LRL+PKC H FHPE
Sbjct: 96   AARGLDVSVIDTFPTLEYKVVKGLKIG-KGALECAVCLNEFEDDETLRLIPKCDHVFHPE 154

Query: 1243 CIDMWLSSNTTCPVCRTSLVPDD 1175
            CID WL+S+TTCPVCR +LVP D
Sbjct: 155  CIDEWLASHTTCPVCRANLVPQD 177


>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
            gi|223548304|gb|EEF49795.1| ring finger protein, putative
            [Ricinus communis]
          Length = 380

 Score =  165 bits (417), Expect = 6e-38
 Identities = 101/243 (41%), Positives = 125/243 (51%), Gaps = 5/243 (2%)
 Frame = -3

Query: 1582 KFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPGNGLGRLEPAPRGLDK 1403
            +  PSMAIIIVVL+ A FFMGFFS+Y+R C   S+    + +  G G  R   A RGLD 
Sbjct: 39   RVTPSMAIIIVVLIAALFFMGFFSVYIRHCANSSNGVSVQGLANG-GRSRRAAAARGLDA 97

Query: 1402 EVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPECIDMWLS 1223
             VIE+FP   Y  +KGLK   K  +ECAVCL +F DDE LRLLPKC H FHP+CID WL+
Sbjct: 98   AVIETFPTLVYSEVKGLKIG-KGALECAVCLCEFEDDETLRLLPKCDHVFHPDCIDAWLA 156

Query: 1222 SNTTCPVCRTSLVPDDMTNPTGTGFGVIEPVIEPVEDAPEIGVPIGSMSRRTVGFSLPTS 1043
            S+TTCPVCR++L P  +  PT T            E  P+                L   
Sbjct: 157  SHTTCPVCRSNLTPQPVDPPTQT-----------TESLPDSSS------------DLEAQ 193

Query: 1042 NEGSVXXXXXXXXXXXXXXXXRVPEPKVIE-----NSESPITEEGPRNSNLSRSYSTGHS 878
            NE +V                  PEP+V+      N          R S   RS+STGHS
Sbjct: 194  NE-AVVELEPQPEVCENAQVAVAPEPEVMSVNQTLNRNRTRGSRSGRPSKFPRSHSTGHS 252

Query: 877  LVR 869
            L++
Sbjct: 253  LIQ 255


>gb|EOY15349.1| RING/U-box superfamily protein, putative [Theobroma cacao]
          Length = 420

 Score =  164 bits (416), Expect = 8e-38
 Identities = 105/252 (41%), Positives = 134/252 (53%), Gaps = 14/252 (5%)
 Frame = -3

Query: 1582 KFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGR--RRVGPGNGLGRLEPAPRGL 1409
            KFNPSMAI++VVL+TAFFFMGFFS+Y+R+C +     G     V  G    RL    RGL
Sbjct: 62   KFNPSMAIVMVVLVTAFFFMGFFSVYIRQCAQRRMRGGNWDASVNFGRPSRRLT---RGL 118

Query: 1408 DKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPECIDMW 1229
            D  VIESFP F Y  +KGLK    + +ECAVCLN+F DDE LRL+PKC H FHP+CID W
Sbjct: 119  DASVIESFPTFLYSTVKGLKIGN-DTLECAVCLNEFEDDETLRLIPKCSHVFHPDCIDAW 177

Query: 1228 LSSNTTCPVCRTSLVP---DDMTNPTGTGFGVIEPVIEPVEDAPEIGVPIGSMSRRTVGF 1058
            L S++TCPVCR +L P   +D++ PT   +G     +E +E+ P+       MSR     
Sbjct: 178  LLSHSTCPVCRANLAPKPGEDISCPTVPVYG---SELE-LENRPDNNNASNEMSRTEA-- 231

Query: 1057 SLPTSNEGSVXXXXXXXXXXXXXXXXRVPEPKVIENSESPITEEGPRNSN---------L 905
                                        P    + NS +PI +  P  S           
Sbjct: 232  --------------------VNQRRDVEPLDVNLVNSNTPIIQNRPPRSRSTGWMLTRLF 271

Query: 904  SRSYSTGHSLVR 869
             RS+STGH LV+
Sbjct: 272  PRSHSTGHLLVQ 283


>emb|CBI36742.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  163 bits (412), Expect = 2e-37
 Identities = 82/149 (55%), Positives = 103/149 (69%), Gaps = 4/149 (2%)
 Frame = -3

Query: 1609 SDDDYLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPGNGLGRL 1430
            S+D Y    +F+ SMAIIIV+L+ A F MGFFS+Y+R C+ DS   G  R   G  LGR 
Sbjct: 79   SNDPY-QQQRFSSSMAIIIVILVAALFLMGFFSVYIRHCS-DSRNGGSIRAAAGAALGRS 136

Query: 1429 EPAPRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFH 1250
                RGLD+ V+E+FP F Y ++KGLK   K ++ECAVCLN+F D+E LRL+PKC H FH
Sbjct: 137  RRGTRGLDQAVLETFPTFEYSVVKGLKIG-KGVLECAVCLNEFEDNETLRLIPKCDHVFH 195

Query: 1249 PECIDMWLSSNTTCPVCRTSL----VPDD 1175
            PECID WL+S+ TCPVCR +L    VP D
Sbjct: 196  PECIDAWLASHVTCPVCRANLTEPAVPTD 224


>tpg|DAA61870.1| TPA: putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 404

 Score =  161 bits (407), Expect = 9e-37
 Identities = 86/181 (47%), Positives = 107/181 (59%), Gaps = 2/181 (1%)
 Frame = -3

Query: 1627 HSHDKYSDDDYLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPG 1448
            H   +  +  Y + + FNPSMAI+IVVL+ AFFF+GFFS+YVR C  D S+       PG
Sbjct: 31   HGQGQQPEGPYYSRS-FNPSMAIVIVVLIAAFFFLGFFSVYVRHCYGDGSSGYSASPAPG 89

Query: 1447 NGLGRLEPAPRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPK 1268
                R     RGLD  V+ESFP   Y  +K  K   K  +ECAVCL++F DDE LRLLPK
Sbjct: 90   GAAARSRRQQRGLDSAVLESFPTMAYADVKAHKAG-KGALECAVCLSEFDDDETLRLLPK 148

Query: 1267 CGHAFHPECIDMWLSSNTTCPVCRTSLV--PDDMTNPTGTGFGVIEPVIEPVEDAPEIGV 1094
            C H FHP+CID WL+S+ TCPVCRT+L   PD    P         P + P  +A E+  
Sbjct: 149  CSHVFHPDCIDTWLASHVTCPVCRTNLALGPDANAPPPDDD----TPELLPAPEAQELPS 204

Query: 1093 P 1091
            P
Sbjct: 205  P 205


>gb|ACN37076.1| unknown [Zea mays]
          Length = 233

 Score =  161 bits (407), Expect = 9e-37
 Identities = 88/185 (47%), Positives = 111/185 (60%), Gaps = 15/185 (8%)
 Frame = -3

Query: 1579 FNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSST--TGRRRVGPGNGLGRLEPAPRGLD 1406
            F+PSMAI+IVVL+ AFFF+GFFS+YVR C  D S+  +  R   PG    R     RGLD
Sbjct: 50   FSPSMAIVIVVLIAAFFFLGFFSIYVRHCYGDGSSGYSANRPPAPGGAAARSR-RQRGLD 108

Query: 1405 KEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPECIDMWL 1226
            + V+ESFP   Y  +K  K   K  +ECAVCL++F DDE LRLLPKC H FHP+CID WL
Sbjct: 109  EAVLESFPTMAYADVKAHKAG-KGALECAVCLSEFDDDETLRLLPKCSHVFHPDCIDTWL 167

Query: 1225 SSNTTCPVCRTSLVPDDMT------------NPTGTGFGV-IEPVIEPVEDAPEIGVPIG 1085
            +S+ TCPVCR +LVPD               +P G    V + PV   +  A  +GV + 
Sbjct: 168  ASHVTCPVCRANLVPDANAQRRRRQQPRREEHPAGPVRAVAVVPVANVLRQASRVGVTVD 227

Query: 1084 SMSRR 1070
            +  RR
Sbjct: 228  AQGRR 232


>ref|XP_002462520.1| hypothetical protein SORBIDRAFT_02g027200 [Sorghum bicolor]
            gi|241925897|gb|EER99041.1| hypothetical protein
            SORBIDRAFT_02g027200 [Sorghum bicolor]
          Length = 412

 Score =  160 bits (404), Expect = 2e-36
 Identities = 98/248 (39%), Positives = 125/248 (50%), Gaps = 7/248 (2%)
 Frame = -3

Query: 1597 YLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRC-TEDSSTTGRRRVGPGNGLGRLEPA 1421
            Y     F+PSMAI+IVVL+ AFFF+GFFS+YVR C     S+      GP     R    
Sbjct: 43   YYQQQSFSPSMAIVIVVLIAAFFFLGFFSIYVRHCYAGGDSSNSTDPAGPNGAAARSRRQ 102

Query: 1420 PRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPEC 1241
             RGLD  V+ESFP   Y  +K  K   K  +ECAVCL++F DDE LRLLPKC H FHP+C
Sbjct: 103  QRGLDAAVLESFPTMAYADVKAHKAG-KGALECAVCLSEFDDDETLRLLPKCSHVFHPDC 161

Query: 1240 IDMWLSSNTTCPVCRTSLVPD-DMTNPTGTGFGVIEPVIEPVEDAPEIGVPIGSMSRRTV 1064
            ID WL+S+ TCPVCR +LVP  D   P   G           +DAPE+ +P         
Sbjct: 162  IDTWLASHVTCPVCRANLVPGADDNAPPADG-----------DDAPELPLPAAPAQEPLP 210

Query: 1063 GFSLPTSNEGSVXXXXXXXXXXXXXXXXRVPEP-----KVIENSESPITEEGPRNSNLSR 899
              S PTS   +                  + E      ++     +  ++ G   +   R
Sbjct: 211  --SPPTSAPPAAPAAAVVIDVDETEEERIIREETDELMRIGSVKRALRSKSGRAPAGFPR 268

Query: 898  SYSTGHSL 875
            S+STGHSL
Sbjct: 269  SHSTGHSL 276


>ref|XP_003578264.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Brachypodium
            distachyon]
          Length = 399

 Score =  159 bits (402), Expect = 3e-36
 Identities = 101/256 (39%), Positives = 132/256 (51%), Gaps = 6/256 (2%)
 Frame = -3

Query: 1585 TKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPGNGLGRLEPAPRGLD 1406
            T+F+PSMAI+IVVL+ AFFF+GFFS+Y+R C  D S      +  GN   R     RGLD
Sbjct: 45   TQFSPSMAIVIVVLIAAFFFLGFFSVYIRHCYGDRSGYSVNPLPAGNA-ARSRRQQRGLD 103

Query: 1405 KEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPECIDMWL 1226
            K V+E+FP   Y  +K  K+  K  +ECAVCL++F DDE LRLLPKC H FHP+CID WL
Sbjct: 104  KAVLETFPTMAYADVKEHKS-VKGALECAVCLSEFDDDETLRLLPKCSHVFHPDCIDTWL 162

Query: 1225 SSNTTCPVCRTSL-VPDDMTNPTGTGFGVIEPVIEPVEDAPEIGVPIGSMSRRTVGFSLP 1049
            +S+ TCPVCR  L VPDD            +P   P  D  ++ V    +S   V    P
Sbjct: 163  ASHVTCPVCRAVLDVPDD------------DPAAAPAGD--DVSVEAAELSAPPVPAPPP 208

Query: 1048 TSNEGS--VXXXXXXXXXXXXXXXXRVPEPKVIENSESPITEEGPRNSNLSRSYSTGHSL 875
              +  +  V                   E   I + +  +  +  R +   RS+STGHSL
Sbjct: 209  QESPAAAVVIDVAEEETEEERIIREETDELTRIGSLKRALRSKSSRRAPFPRSHSTGHSL 268

Query: 874  VR---LRKDMGEEKST 836
                  R   G E+ T
Sbjct: 269  AAAGGTRAGTGAERFT 284


>ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea mays]
            gi|194707124|gb|ACF87646.1| unknown [Zea mays]
            gi|414589721|tpg|DAA40292.1| TPA: putative RING zinc
            finger domain superfamily protein [Zea mays]
          Length = 393

 Score =  159 bits (402), Expect = 3e-36
 Identities = 85/165 (51%), Positives = 104/165 (63%), Gaps = 2/165 (1%)
 Frame = -3

Query: 1579 FNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSST--TGRRRVGPGNGLGRLEPAPRGLD 1406
            F+PSMAI+IVVL+ AFFF+GFFS+YVR C  D S+  +  R   PG    R     RGLD
Sbjct: 50   FSPSMAIVIVVLIAAFFFLGFFSIYVRHCYGDGSSGYSANRPPAPGGAAARSR-RQRGLD 108

Query: 1405 KEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPECIDMWL 1226
            + V+ESFP   Y  +K  K   K  +ECAVCL++F DDE LRLLPKC H FHP+CID WL
Sbjct: 109  EAVLESFPTMAYADVKAHKAG-KGALECAVCLSEFDDDETLRLLPKCSHVFHPDCIDTWL 167

Query: 1225 SSNTTCPVCRTSLVPDDMTNPTGTGFGVIEPVIEPVEDAPEIGVP 1091
            +S+ TCPVCR +LVPD    P         P     +DAPE+  P
Sbjct: 168  ASHVTCPVCRANLVPDANAPP---------PPPPADDDAPELLPP 203


>ref|XP_003591073.1| RING finger family protein [Medicago truncatula]
            gi|355480121|gb|AES61324.1| RING finger family protein
            [Medicago truncatula] gi|388512099|gb|AFK44111.1| unknown
            [Medicago truncatula]
          Length = 373

 Score =  159 bits (402), Expect = 3e-36
 Identities = 107/260 (41%), Positives = 138/260 (53%), Gaps = 8/260 (3%)
 Frame = -3

Query: 1624 SHDKYSDDDYLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPGN 1445
            ++D  +D+ Y N  + +PSMAIIIV+L+ A F MGFFS+Y+RRC +  S + R   G   
Sbjct: 32   TNDNTNDNSYYN--RVSPSMAIIIVILVAALFLMGFFSIYIRRCGDSPSNSIRNMAG--- 86

Query: 1444 GL-GRLEPAPRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPK 1268
            GL GR   A RGLD  VI +FP+F Y  +K  K   K  +ECAVCLN+F + E LRL+PK
Sbjct: 87   GLAGRSRRAARGLDASVIATFPIFEYSTVKIHKIG-KGALECAVCLNEFEESETLRLIPK 145

Query: 1267 CGHAFHPECIDMWLSSNTTCPVCRTSLVPDDMTNPTGTGFGVIEPV-IEPVEDAPEIGVP 1091
            C H FHPECID WL S+TTCPVCR +LVP    +  G      EP  IE   DA E    
Sbjct: 146  CDHVFHPECIDEWLGSHTTCPVCRANLVPQPGESVHGIPSINTEPQDIEAQNDAVE---- 201

Query: 1090 IGSMSRRTVGFSLPTSNEGSVXXXXXXXXXXXXXXXXRVPEPKVIENSESPITEEGPRNS 911
                           + +GSV                   EP+V+  S++ +     R S
Sbjct: 202  ---------SVHEHQNADGSVKVDP--------------TEPEVLTVSQT-LNRNRTRGS 237

Query: 910  N------LSRSYSTGHSLVR 869
                     RS+STGHSLV+
Sbjct: 238  QSGRPRWFQRSHSTGHSLVQ 257


>ref|XP_004495745.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cicer arietinum]
          Length = 652

 Score =  159 bits (401), Expect = 4e-36
 Identities = 116/339 (34%), Positives = 165/339 (48%), Gaps = 10/339 (2%)
 Frame = -3

Query: 1606 DDDYLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPGNGLGRLE 1427
            +D Y N  + +PSMAIIIV+L+ A F MGFFS+Y+R+C +  S + R   G     GR  
Sbjct: 41   NDSYYN--RVSPSMAIIIVILIAALFLMGFFSIYIRQCADSPSNSIRNIAGV---TGRSR 95

Query: 1426 PAPRGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHP 1247
               RGLD  VIE+FP F Y ++K  K   K  +ECAVCLN+F + E LRL+PKC H FHP
Sbjct: 96   RGARGLDPSVIETFPTFEYSVVKIHKIG-KGALECAVCLNEFEETETLRLIPKCDHVFHP 154

Query: 1246 ECIDMWLSSNTTCPVCRTSLVPDDMTNPTG-----TGFGVIEPVIEPVEDAPEIGVPIGS 1082
            ECID WLSS+TTCPVCR +LVP    +  G     T    IE   + VE  PE       
Sbjct: 155  ECIDEWLSSHTTCPVCRANLVPQPGESVHGIPLLNTEQEDIEAQNDAVETLPE------- 207

Query: 1081 MSRRTVGFSLPTSNEGSVXXXXXXXXXXXXXXXXRVPEPKVIENSESPITEEGPRNSN-- 908
               +    +L  S E                     PE   +  + +     G R+    
Sbjct: 208  --NQNTETALKESAE---------------------PEVLSLNQTLNRNRTRGSRSGRPR 244

Query: 907  -LSRSYSTGHSLVRLRKDMGEEKSTEWFISTPKGLTPASHKT--CTYAINQAMALHSKSQ 737
               RS+STGHSLV L   M +E+  +   S+     P+  +    + A +   +L   SQ
Sbjct: 245  WFPRSHSTGHSLVDLGTKMEKEREEQNKKSSVVIRIPSYQEVVESSQAKSTPPSLFIPSQ 304

Query: 736  GYNIGASKFSRFPFFSKQLSFVRDGGQQQQTAELQNSGS 620
             ++   +      F+S   S  ++ GQ + ++   ++ +
Sbjct: 305  TFSEAFAFVKSSEFYSPPPSLPKETGQSEASSSTPSTSN 343


>ref|XP_002319561.2| hypothetical protein POPTR_0013s02670g [Populus trichocarpa]
            gi|550324785|gb|EEE95484.2| hypothetical protein
            POPTR_0013s02670g [Populus trichocarpa]
          Length = 386

 Score =  158 bits (399), Expect = 7e-36
 Identities = 98/243 (40%), Positives = 124/243 (51%)
 Frame = -3

Query: 1597 YLNNTKFNPSMAIIIVVLLTAFFFMGFFSLYVRRCTEDSSTTGRRRVGPGNGLGRLEPAP 1418
            Y N  +  PSMAIIIVVL+ A F MGFFS+Y+R C E S+    R +G   GL R   A 
Sbjct: 38   YNNYAQVTPSMAIIIVVLVAALFSMGFFSIYIRHCNEASANGSIRALGVV-GLSRRAAAS 96

Query: 1417 RGLDKEVIESFPVFTYDLLKGLKTQTKEIMECAVCLNDFADDEQLRLLPKCGHAFHPECI 1238
            RGLD  VIE+FP   Y ++KGLK     + ECAVCLN+F DDE LRL+P C H FHP+CI
Sbjct: 97   RGLDPGVIETFPTLIYSVVKGLKIGNGAL-ECAVCLNEFEDDETLRLIPNCDHVFHPDCI 155

Query: 1237 DMWLSSNTTCPVCRTSLVPDDMTNPTGTGFGVIEPVIEPVEDAPEIGVPIGSMSRRTVGF 1058
            D WL S+TTCPVCR      D+T P  T           V    E+  P   +  +    
Sbjct: 156  DAWLESHTTCPVCRA-----DLTKPADT-----------VSQLSELHSPELDLEAQNGAL 199

Query: 1057 SLPTSNEGSVXXXXXXXXXXXXXXXXRVPEPKVIENSESPITEEGPRNSNLSRSYSTGHS 878
             +   N  +                  V   K +  + +  +  G R     RS+STGHS
Sbjct: 200  GIEPENGNA---NVEVQVVGPEPDDVSVNVNKTLNRNRTRGSRSG-RPPRFPRSHSTGHS 255

Query: 877  LVR 869
            LV+
Sbjct: 256  LVQ 258