BLASTX nr result
ID: Ephedra28_contig00001627
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00001627
(1468 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16106.1| unknown [Picea sitchensis] 463 e-128
ref|XP_006829965.1| hypothetical protein AMTR_s00127p00033470 [A... 362 2e-97
ref|XP_004232027.1| PREDICTED: RNA-binding protein Musashi homol... 359 2e-96
ref|XP_006339894.1| PREDICTED: heterogeneous nuclear ribonucleop... 354 6e-95
ref|XP_004511926.1| PREDICTED: heterogeneous nuclear ribonucleop... 353 1e-94
gb|EEE55995.1| hypothetical protein OsJ_04743 [Oryza sativa Japo... 352 3e-94
gb|ESW28793.1| hypothetical protein PHAVU_002G018500g [Phaseolus... 351 4e-94
gb|EOX91425.1| RNA-binding (RRM/RBD/RNP motifs) family protein i... 350 1e-93
gb|EOX91424.1| RNA-binding family protein isoform 2 [Theobroma c... 350 1e-93
gb|EMJ03297.1| hypothetical protein PRUPE_ppa007568mg [Prunus pe... 349 1e-93
ref|XP_003611735.1| RNA-binding protein [Medicago truncatula] gi... 349 2e-93
gb|EEC72139.1| hypothetical protein OsI_05159 [Oryza sativa Indi... 348 3e-93
gb|ACG33855.1| heterogeneous nuclear ribonucleoprotein 27C [Zea ... 348 3e-93
ref|NP_001131827.1| heterogeneous nuclear ribonucleoprotein 27C ... 348 3e-93
ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding prote... 348 4e-93
ref|XP_004288032.1| PREDICTED: heterogeneous nuclear ribonucleop... 347 7e-93
ref|NP_001045380.2| Os01g0945800 [Oryza sativa Japonica Group] g... 347 7e-93
gb|EOX91426.1| RNA-binding (RRM/RBD/RNP motifs) family protein i... 347 1e-92
gb|ACJ85509.1| unknown [Medicago truncatula] gi|388503058|gb|AFK... 347 1e-92
ref|XP_001785814.1| predicted protein [Physcomitrella patens] gi... 347 1e-92
>gb|ABR16106.1| unknown [Picea sitchensis]
Length = 409
Score = 463 bits (1192), Expect = e-128
Identities = 253/410 (61%), Positives = 282/410 (68%), Gaps = 15/410 (3%)
Frame = +1
Query: 4 RERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKV 183
RERKLVVLGIPWDVDTEGL+++M K+G++DD+IVMRDR T RSRGFGY TFSSVEDAKK
Sbjct: 4 RERKLVVLGIPWDVDTEGLQDYMGKFGELDDVIVMRDRATGRSRGFGYATFSSVEDAKKA 63
Query: 184 LEMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDL 363
L+ +H LNGR LEVKVATPKEEMK PSKKITRIFVARIP SVTED FR YFE +GNIEDL
Sbjct: 64 LDSEHFLNGRALEVKVATPKEEMKAPSKKITRIFVARIPPSVTEDAFRKYFEEFGNIEDL 123
Query: 364 YMPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXX 543
YMPKE+GSKGHRGIGFITFE+S +VD+LMSETH LGGATIA+DRA PKEES+K W
Sbjct: 124 YMPKEKGSKGHRGIGFITFESSGSVDRLMSETHMLGGATIAVDRATPKEESTKQW----- 178
Query: 544 XXXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYG---PLH 714
TRY + + LYDH S G+RDGY S +G GYG G P H
Sbjct: 179 --AKPVSGGYGAYNAYINAATRYGALGSATLYDHPSSGFRDGYASEVGGGYGSGNSWPPH 236
Query: 715 APGGLM-GSPYGVPDR-XXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGT 888
GG++ GS YG+ DR KKIFVGRL QEA A DLRRYFS+FGT
Sbjct: 237 GAGGMIGGSSYGMADRGAGYGPGSFSGPPPRGMGKKIFVGRLSQEATAGDLRRYFSNFGT 296
Query: 889 XXXXXXXXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDKY--G 1062
GHRGFGFVTF E+G+ADRV+RR+HEILGQQVAIDSATP DDD +
Sbjct: 297 VVDVYVPKDARRSGHRGFGFVTFAEDGVADRVSRRSHEILGQQVAIDSATPPDDDIHYVD 356
Query: 1063 DGHSSPVGAAGHP-RGPHSYLGDGGYDW-------EPRPAGPSARLPRMD 1188
DG P G G P RGP SY G GGYDW P P G R RMD
Sbjct: 357 DGIPPPAGGIGGPLRGPASYSG-GGYDWGYGSSGIGPGPTG--GRASRMD 403
>ref|XP_006829965.1| hypothetical protein AMTR_s00127p00033470 [Amborella trichopoda]
gi|548835604|gb|ERM97381.1| hypothetical protein
AMTR_s00127p00033470 [Amborella trichopoda]
Length = 413
Score = 362 bits (930), Expect = 2e-97
Identities = 204/401 (50%), Positives = 239/401 (59%), Gaps = 7/401 (1%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
E KLVVLGIPWDVDTEGL ++MSK+G+++D IVM++R T RSRGFGYVTF+S EDAKKVL
Sbjct: 52 ENKLVVLGIPWDVDTEGLRDYMSKFGELEDAIVMKERSTGRSRGFGYVTFASAEDAKKVL 111
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
E H+L R LEVKVATP+EEM+ PSKKITRIFVARIP SVTE FR YFE+YG I DLY
Sbjct: 112 ETQHILGSRMLEVKVATPREEMRAPSKKITRIFVARIPHSVTEAMFREYFETYGEITDLY 171
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPK+Q +KGHRGIGF+T+ENSE+VD LM+ETH+LGG+TI +DRA PKE+ +
Sbjct: 172 MPKDQTTKGHRGIGFVTYENSESVDTLMAETHELGGSTIVVDRATPKEDEIRQ------- 224
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRYA LYDH S Y G GA +G G
Sbjct: 225 PMRAPPGGYGAYNAYITAATRYAVQGAPTLYDHPSSVYGRGVS---GAAHGMG------- 274
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
KKIF+GRLPQEA EDLR+YF FG
Sbjct: 275 ----------------------------KKIFIGRLPQEATVEDLRQYFVKFGRILDAYI 306
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDK-----YGDGH 1071
GHRGFGFVTF E+G+A+RV+RR HEI GQQVAIDSATPLDD D
Sbjct: 307 PKDPKRTGHRGFGFVTFAEDGVAERVSRRTHEIHGQQVAIDSATPLDDTGTSGPFVSDAI 366
Query: 1072 SSPVGAAGHPRGPHSYLGDGGYDWEP--RPAGPSARLPRMD 1188
G G P + + +G D+E G R RMD
Sbjct: 367 EPMAGGYGGPMRGYGRIYNGNMDFEDWGYVNGGGGRTSRMD 407
>ref|XP_004232027.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Solanum
lycopersicum]
Length = 376
Score = 359 bits (921), Expect = 2e-96
Identities = 199/376 (52%), Positives = 231/376 (61%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
E+KLVVLGIPWDVDTEGL E+M KYGD++D IVM++R T RSRGFGYVTF++VEDAK L
Sbjct: 3 EKKLVVLGIPWDVDTEGLREYMIKYGDLEDCIVMKERATGRSRGFGYVTFATVEDAKNAL 62
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
+H L R LEVKVATPKEEM+ P+KK+TRIFVARIP SV+E FR YFE YG I DLY
Sbjct: 63 SKEHFLGNRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVSEATFRGYFEKYGEITDLY 122
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPK+ +KGHRGIGFITF N+E+VD LMS+TH+LGG+TI +DRA PKEE +
Sbjct: 123 MPKDPSTKGHRGIGFITFANAESVDDLMSDTHELGGSTIVVDRATPKEEDFR-----PVS 177
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRY + LYDH S Y G G G G G G + GG
Sbjct: 178 RMSQSGGGYGAYNAYMSATTRYGALGAPTLYDHPSSMYGRGGG---GGGGGGGGFPSRGG 234
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
L +KIFVGRLPQEA EDLR+YF FG
Sbjct: 235 L--------------------------GQKIFVGRLPQEATTEDLRQYFGRFGRVLDVYV 268
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDKYGDGHSSPVG 1086
GHRGFGFVTF ++G+ADRV+RR HEI G QVAIDSATPLDD G S+
Sbjct: 269 PKDPRRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVAIDSATPLDD----AGPSNNYM 324
Query: 1087 AAGHPRGPHSYLGDGG 1134
P P +Y G GG
Sbjct: 325 MDPPPPAPEAYGGYGG 340
>ref|XP_006339894.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Solanum
tuberosum]
Length = 371
Score = 354 bits (908), Expect = 6e-95
Identities = 196/376 (52%), Positives = 229/376 (60%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
ERKLVVLGIPWDVDTEGL E+M KYGD++D IVM++R T RSRGFGYVTF++VEDAK L
Sbjct: 3 ERKLVVLGIPWDVDTEGLREYMIKYGDLEDCIVMKERATGRSRGFGYVTFATVEDAKNAL 62
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
+H L R LEVKVATPKEEM+ P+KK+TRIFVARIP SV+E FR YFE YG I DLY
Sbjct: 63 SKEHFLGNRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVSEATFRGYFEKYGEITDLY 122
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPK+ +KGHRGIGFITF N+E+VD LM++TH+LGG+TI +DRA PKEE +
Sbjct: 123 MPKDPSTKGHRGIGFITFANAESVDDLMNDTHELGGSTIVVDRATPKEEDFR-----PVS 177
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRY + LYDH S Y G G G G + GG
Sbjct: 178 RMSQGGGGYGAYNAYMSATTRYGALGAPTLYDHPSSMY--------GRGGGGGGFPSRGG 229
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
+ +KIFVGRLPQEA EDLR+YF FG
Sbjct: 230 M--------------------------GQKIFVGRLPQEATTEDLRQYFGRFGRVLDVYV 263
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDKYGDGHSSPVG 1086
GHRGFGFVTF ++G+ADRV+RR HEI G QVAIDSATPLDD G S+
Sbjct: 264 PKDPRRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVAIDSATPLDD----AGPSNNYM 319
Query: 1087 AAGHPRGPHSYLGDGG 1134
P P +Y G GG
Sbjct: 320 MDPPPPAPEAYGGYGG 335
>ref|XP_004511926.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cicer
arietinum]
Length = 359
Score = 353 bits (906), Expect = 1e-94
Identities = 198/399 (49%), Positives = 240/399 (60%), Gaps = 5/399 (1%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
+RKLVVLGIPWDVDT+GL+E+MSKYG+++D IVM++R T RSRGFGYVTF+S++DAK+VL
Sbjct: 3 QRKLVVLGIPWDVDTDGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASLDDAKEVL 62
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
+HVL R LEVKVATPKEEM+ P+KK+TRIFVARIP SVTE FRS+FE YG I DLY
Sbjct: 63 SGEHVLGNRMLEVKVATPKEEMRAPAKKVTRIFVARIPQSVTEATFRSHFEKYGEITDLY 122
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPK+QGSK HRGIGFITF N+E+V+ LMSETH+LGG+ + +DRA PK++ K
Sbjct: 123 MPKDQGSKMHRGIGFITFANAESVENLMSETHELGGSAVVVDRATPKDDDVK-------P 175
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRYA + LYDH P Y G R
Sbjct: 176 TGRISQGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRR--------------- 220
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
KKIFVGRLP EAN++DLR+YF FG
Sbjct: 221 -------------------------RISKKIFVGRLPPEANSDDLRQYFGRFGHIEDVYI 255
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDD----DKYGDGHS 1074
GHRGFGFVTF E G+ADRV+RR HEILG +VAIDSATP+DD + +
Sbjct: 256 PRDPKRTGHRGFGFVTFAEEGVADRVSRRPHEILGHEVAIDSATPVDDAGPSGNFMMNNM 315
Query: 1075 SPVGAAGHPRGPHSYLGDGGYDWEPRPAG-PSARLPRMD 1188
P G G P + + GG D++ G PS R R D
Sbjct: 316 EPYGGYGGPLRSYGRM-YGGLDYDDWGYGVPSGRPSRAD 353
>gb|EEE55995.1| hypothetical protein OsJ_04743 [Oryza sativa Japonica Group]
Length = 372
Score = 352 bits (902), Expect = 3e-94
Identities = 200/396 (50%), Positives = 242/396 (61%), Gaps = 4/396 (1%)
Frame = +1
Query: 13 KLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVLEM 192
KLVVLGIPWDVDTEGL E+M K+G +DD +VM++R + RSRGFGYVTFSS +DAK VLE
Sbjct: 4 KLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNVLEC 63
Query: 193 DHVLNGRKLEVKVATPKEEMKTP-SKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLYM 369
+HVL R LEVK+ATPKEEMK+ SKK TRIFVARIP SV E FR +FE+YG I DLYM
Sbjct: 64 EHVLGNRTLEVKIATPKEEMKSQGSKKATRIFVARIPQSVDESMFRRHFEAYGEITDLYM 123
Query: 370 PKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXXX 549
PKE GSKGHRGIGFITF+++E+VD +M ++H+L G T+ +DRA PK+E ++
Sbjct: 124 PKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRY-----PPS 178
Query: 550 XXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGGL 729
TRYA + LYDH PG YGS+ A G GG
Sbjct: 179 RGASQGGYGAYNAYISAATRYAALGAPTLYDH--PG--SAYGSKSSATKITG-----GGY 229
Query: 730 MGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXXX 909
GS G+ + KKIFVGRLPQEAN EDLR YF FG
Sbjct: 230 YGSSQGMGN------------------KKIFVGRLPQEANTEDLRHYFGKFGRIVDAYIP 271
Query: 910 XXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDKYGDGHSSPV-- 1083
GHRGFGFVTF + G+ADRVARR+HEILG +VAID+A PL+ D G G+ P+
Sbjct: 272 KDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAIDTAAPLEGDS-GGGYMEPMDL 330
Query: 1084 -GAAGHPRGPHSYLGDGGYDWEPRPAGPSARLPRMD 1188
GA G R + YD+ +G S+ R D
Sbjct: 331 YGAYGSMRTYGRFCSGIDYDYGYGHSGSSSSRSRAD 366
Score = 105 bits (261), Expect = 6e-20
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 59/232 (25%)
Frame = +1
Query: 1 ERERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKK 180
++ ++ V IP VD H YG+I D+ + ++ + RG G++TF S E
Sbjct: 89 KKATRIFVARIPQSVDESMFRRHFEAYGEITDLYMPKEHGSKGHRGIGFITFQSAESVDS 148
Query: 181 VLEMDHVLNGRKLEVKVATPKEE------------------------------------- 249
+++ H L+G + V ATPK+E
Sbjct: 149 IMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNAYISAATRYAALGAPTLY 208
Query: 250 --------MKTPSKKIT--------------RIFVARIPSSVTEDEFRSYFESYGNIEDL 363
K+ + KIT +IFV R+P ++ R YF +G I D
Sbjct: 209 DHPGSAYGSKSSATKITGGGYYGSSQGMGNKKIFVGRLPQEANTEDLRHYFGKFGRIVDA 268
Query: 364 YMPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESS 519
Y+PK+ GHRG GF+TF + D++ +H++ G +AID AAP E S
Sbjct: 269 YIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAIDTAAPLEGDS 320
>gb|ESW28793.1| hypothetical protein PHAVU_002G018500g [Phaseolus vulgaris]
Length = 357
Score = 351 bits (901), Expect = 4e-94
Identities = 197/400 (49%), Positives = 240/400 (60%), Gaps = 17/400 (4%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
+RKLVVLGIPWDVDTEGL E+MSK+G+++D IVM++R T RSRGFGYVTF+SV+DAK VL
Sbjct: 3 QRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKDVL 62
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
+H+L R LEVKVATPKEEM+ P KK+TRIFVARIP SVTE FRS+FE YG+I DLY
Sbjct: 63 SGEHILGNRTLEVKVATPKEEMRAPVKKVTRIFVARIPQSVTEAAFRSHFEKYGDITDLY 122
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPK+QGSK HRGIGFITF ++++V+ LMSETH+LGG+ + +DRA PK+E K
Sbjct: 123 MPKDQGSKTHRGIGFITFASADSVESLMSETHELGGSAVVVDRATPKDEDFK----PIGS 178
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRYA + LYDH P Y G +R +
Sbjct: 179 SRMPPQGGYGAYNAYISAATRYAALGTPTLYDHPGPIYGRGEPARRTS------------ 226
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
KKIFVGRLP EA++EDLR+YF FG
Sbjct: 227 ----------------------------KKIFVGRLPPEASSEDLRQYFGRFGRILDVYV 258
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDD---------DKY 1059
GHRGFGFVTF E+G+ADRV+RR+HEI G QVAIDSATP+DD + +
Sbjct: 259 PRDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPVDDAGPSGNFMMESF 318
Query: 1060 GDGHSSPVGAAGHPRGPHSYLGDGGY--------DWEPRP 1155
G G+ PV + G G + D GY DW RP
Sbjct: 319 G-GYGGPVRSYGRMYGSLDF-DDWGYGIGRPSRADWRYRP 356
>gb|EOX91425.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 3 [Theobroma
cacao]
Length = 357
Score = 350 bits (897), Expect = 1e-93
Identities = 190/367 (51%), Positives = 230/367 (62%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
+RKLVVLGIPW+VDTEGL ++MSK+GD++D IVM++R T RSRGFGYVTF+S +DAK VL
Sbjct: 2 DRKLVVLGIPWEVDTEGLRKYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASADDAKNVL 61
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
++H L R LEVK+ATPKEEM+ P+KK+TRIFVARIP SV E FRS+FE YG I DLY
Sbjct: 62 SIEHFLGERMLEVKIATPKEEMRAPAKKVTRIFVARIPPSVDESTFRSHFEEYGEITDLY 121
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPK+Q SK HRGIGFITF ++++V+ LM++TH+LGG+T+ +DRA PKE+ K
Sbjct: 122 MPKDQASKAHRGIGFITFASADSVENLMTDTHELGGSTVVVDRATPKEDDFK-------P 174
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRYA + LYDH P Y G +R G G
Sbjct: 175 IGRMSQGGYGAYNAYISAATRYAALGAPTLYDHPGPVYGRGESTR-GMG----------- 222
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
KKIFVGRLPQEANAEDLR+YF FG
Sbjct: 223 ----------------------------KKIFVGRLPQEANAEDLRQYFGRFGRILDVYV 254
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDKYGDGHSSPVG 1086
GHRGFGFVTF E+G+ADRV+RR+HEI GQQVAIDSATP+DD G S +
Sbjct: 255 PKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPVDD----AGPSFMMN 310
Query: 1087 AAGHPRG 1107
AG RG
Sbjct: 311 PAGPYRG 317
>gb|EOX91424.1| RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 356
Score = 350 bits (897), Expect = 1e-93
Identities = 190/367 (51%), Positives = 230/367 (62%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
+RKLVVLGIPW+VDTEGL ++MSK+GD++D IVM++R T RSRGFGYVTF+S +DAK VL
Sbjct: 2 DRKLVVLGIPWEVDTEGLRKYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASADDAKNVL 61
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
++H L R LEVK+ATPKEEM+ P+KK+TRIFVARIP SV E FRS+FE YG I DLY
Sbjct: 62 SIEHFLGERMLEVKIATPKEEMRAPAKKVTRIFVARIPPSVDESTFRSHFEEYGEITDLY 121
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPK+Q SK HRGIGFITF ++++V+ LM++TH+LGG+T+ +DRA PKE+ K
Sbjct: 122 MPKDQASKAHRGIGFITFASADSVENLMTDTHELGGSTVVVDRATPKEDDFK-------P 174
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRYA + LYDH P Y G +R G G
Sbjct: 175 IGRMSQGGYGAYNAYISAATRYAALGAPTLYDHPGPVYGRGESTR-GMG----------- 222
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
KKIFVGRLPQEANAEDLR+YF FG
Sbjct: 223 ----------------------------KKIFVGRLPQEANAEDLRQYFGRFGRILDVYV 254
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDKYGDGHSSPVG 1086
GHRGFGFVTF E+G+ADRV+RR+HEI GQQVAIDSATP+DD G S +
Sbjct: 255 PKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPVDD----AGPSFMMN 310
Query: 1087 AAGHPRG 1107
AG RG
Sbjct: 311 PAGPYRG 317
>gb|EMJ03297.1| hypothetical protein PRUPE_ppa007568mg [Prunus persica]
Length = 363
Score = 349 bits (896), Expect = 1e-93
Identities = 194/405 (47%), Positives = 240/405 (59%), Gaps = 22/405 (5%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
+RKLVVLGIPWD+DTEGL E+MSK+G+++D IVM+DR T RSRGFGY TF+S EDAK
Sbjct: 2 DRKLVVLGIPWDIDTEGLREYMSKFGELEDCIVMKDRSTGRSRGFGYATFASAEDAKNAA 61
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
+H L R LEVK+ATPKEEM+ P++K+TRIFVARIP VTE FRS+FE YG+I DLY
Sbjct: 62 SSEHFLGNRMLEVKIATPKEEMRAPARKVTRIFVARIPQVVTEATFRSHFEKYGDITDLY 121
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPK+QGSK HRGIGFITFEN+++V+ LM++TH+LGG+T+ +DRA PKE+ +
Sbjct: 122 MPKDQGSKMHRGIGFITFENADSVENLMADTHELGGSTVVVDRATPKEDDFR-------P 174
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRYA + LYDH GP+ P
Sbjct: 175 VGRMAQGGYGAYNAYISAATRYAALGAPTLYDHP------------------GPVPGP-- 214
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
P G R KKIFVGRLPQEA AEDLR+YF FG
Sbjct: 215 --AFPRGESAR--------------GLGKKIFVGRLPQEATAEDLRQYFGRFGRIADVYV 258
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDD------------ 1050
GHRGFGFVTFGE+G+++RV+RR+HEI GQQVAID+ATPLD+
Sbjct: 259 PRDPKRTGHRGFGFVTFGEDGVSERVSRRSHEICGQQVAIDTATPLDEAGTSGNFVMNNV 318
Query: 1051 DKYGDGHSSPVGAAGHPRGPHSYLGDGGY----------DWEPRP 1155
+ +G G+ PV + G G + D GY DW RP
Sbjct: 319 EPFGGGYGGPVRSYGRMYGSLDF-DDWGYGIGSARPSRADWRYRP 362
>ref|XP_003611735.1| RNA-binding protein [Medicago truncatula] gi|355513070|gb|AES94693.1|
RNA-binding protein [Medicago truncatula]
Length = 403
Score = 349 bits (895), Expect = 2e-93
Identities = 198/390 (50%), Positives = 237/390 (60%), Gaps = 13/390 (3%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
+RKLVVLGIPWDVDTEGL+E+MSKYG+++D IVM++R T RSRGFGYVTF+SV+DAK+VL
Sbjct: 3 QRKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVL 62
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
+HVL R LEVKVATPKEEM+ P+KK+TRIFVARIP SVTE+ FRS+FE YG+I DLY
Sbjct: 63 SGEHVLGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYGDITDLY 122
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPK+QGSK HRGIGFITF N+E+V+ LMSETH+LGG+ + +DRA PK
Sbjct: 123 MPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKARED----DVKPT 178
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRYA + LYDH P YGS+ G
Sbjct: 179 GRMSQGGGYGAYNAYISTATRYAALGAPTLYDHPGP----IYGSKHGR------------ 222
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
G P R KKIFVGRLP EAN+EDLR+YF FG
Sbjct: 223 ------GEPRR--------------RISKKIFVGRLPPEANSEDLRQYFGRFGRIEDVYI 262
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDD------------ 1050
GHRGFGFVTF + G+ADRV+ R HEI G +VAIDSATP+DD
Sbjct: 263 PRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGHEVAIDSATPVDDARPSGNFMMNNS 322
Query: 1051 -DKYGDGHSSPVGAAGHPRGPHSYLGDGGY 1137
+ +G G+ PV + G G Y D GY
Sbjct: 323 MESFG-GYGGPVRSYGRMYGGLDY-DDWGY 350
>gb|EEC72139.1| hypothetical protein OsI_05159 [Oryza sativa Indica Group]
Length = 864
Score = 348 bits (894), Expect = 3e-93
Identities = 197/383 (51%), Positives = 238/383 (62%), Gaps = 4/383 (1%)
Frame = +1
Query: 13 KLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVLEM 192
KLVVLGIPWDVDTEGL E+M K+G +DD +VM++R + RSRGFGYVTFSS +DAK VLE
Sbjct: 4 KLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNVLEC 63
Query: 193 DHVLNGRKLEVKVATPKEEMKTP-SKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLYM 369
+HVL R LEVK+ATPKEEMK+ SKK TRIFVARIP SV E FR +FE+YG I DLYM
Sbjct: 64 EHVLGNRTLEVKIATPKEEMKSQGSKKATRIFVARIPQSVDESMFRRHFEAYGEITDLYM 123
Query: 370 PKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXXX 549
PKE GSKGHRGIGFITF+++E+VD +M ++H+L G T+ +DRA PK+E ++
Sbjct: 124 PKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRY-----PPS 178
Query: 550 XXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGGL 729
TRYA + LYDH PG YGS+ A G GG
Sbjct: 179 RGASQGGYGAYNAYISAATRYAALGAPTLYDH--PG--SAYGSKSSATKITG-----GGY 229
Query: 730 MGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXXX 909
GS G+ + KKIFVGRLPQEAN EDLR YF FG
Sbjct: 230 YGSSQGMGN------------------KKIFVGRLPQEANTEDLRHYFGKFGRIVDAYIP 271
Query: 910 XXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDKYGDGHSSPV-- 1083
GHRGFGFVTF + G+ADRVARR+HEILG +VAID+A PL+ D G G+ P+
Sbjct: 272 KDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAIDTAAPLEGDS-GGGYMEPMDL 330
Query: 1084 -GAAGHPRGPHSYLGDGGYDWEP 1149
GA G R + G D++P
Sbjct: 331 YGAYGSMRTYGRFC--SGIDYDP 351
Score = 105 bits (261), Expect = 6e-20
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 59/232 (25%)
Frame = +1
Query: 1 ERERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKK 180
++ ++ V IP VD H YG+I D+ + ++ + RG G++TF S E
Sbjct: 89 KKATRIFVARIPQSVDESMFRRHFEAYGEITDLYMPKEHGSKGHRGIGFITFQSAESVDS 148
Query: 181 VLEMDHVLNGRKLEVKVATPKEE------------------------------------- 249
+++ H L+G + V ATPK+E
Sbjct: 149 IMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNAYISAATRYAALGAPTLY 208
Query: 250 --------MKTPSKKIT--------------RIFVARIPSSVTEDEFRSYFESYGNIEDL 363
K+ + KIT +IFV R+P ++ R YF +G I D
Sbjct: 209 DHPGSAYGSKSSATKITGGGYYGSSQGMGNKKIFVGRLPQEANTEDLRHYFGKFGRIVDA 268
Query: 364 YMPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESS 519
Y+PK+ GHRG GF+TF + D++ +H++ G +AID AAP E S
Sbjct: 269 YIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAIDTAAPLEGDS 320
>gb|ACG33855.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
gi|195644612|gb|ACG41774.1| heterogeneous nuclear
ribonucleoprotein 27C [Zea mays]
Length = 360
Score = 348 bits (893), Expect = 3e-93
Identities = 191/391 (48%), Positives = 238/391 (60%), Gaps = 4/391 (1%)
Frame = +1
Query: 13 KLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVLEM 192
KLVVLGIPWDVDTEGL E+M+K+G +DD +VM++R + RSRGFGYVTF+S +DAK VL+
Sbjct: 4 KLVVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFASADDAKNVLDC 63
Query: 193 DHVLNGRKLEVKVATPKEEMKTP-SKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLYM 369
+HVL R LEVKVATPKEEMK+ SKK TRIFVARIP SV E FR +FE++G I DLYM
Sbjct: 64 EHVLGSRTLEVKVATPKEEMKSQGSKKATRIFVARIPQSVDESMFRRHFEAFGEILDLYM 123
Query: 370 PKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXXX 549
PKE GSKGHRGIGFITF+++E+VD +M E+H+L G T+ +DRA PK+E ++
Sbjct: 124 PKEHGSKGHRGIGFITFQSAESVDNIMQESHELDGTTVVVDRATPKDEDVRY------PP 177
Query: 550 XXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGGL 729
TRYA + LYDH Y GY YGP A G
Sbjct: 178 SRPSQGGYGAYNAYISAATRYATLGAPTLYDHPGSAYGRGY---------YGPSQAVG-- 226
Query: 730 MGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXXX 909
KKIFVGRLPQEAN +DLR+YF FG
Sbjct: 227 ---------------------------KKIFVGRLPQEANTDDLRQYFGRFGRIVDAYIP 259
Query: 910 XXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDKYGDGHSSPV-- 1083
GHRGFGFVTF ++G+A+RVARR+HEILG +VAID+A PL++D G+ P+
Sbjct: 260 KDPKRSGHRGFGFVTFADDGVAERVARRSHEILGHEVAIDTAAPLENDSAAGGYIDPMDL 319
Query: 1084 -GAAGHPRGPHSYLGDGGYDWEPRPAGPSAR 1173
GA G R + G Y++ P+ S+R
Sbjct: 320 YGAYGSMRSFGRFCGGLDYNYGYGPSSGSSR 350
>ref|NP_001131827.1| heterogeneous nuclear ribonucleoprotein 27C isoform 1 [Zea mays]
gi|194692652|gb|ACF80410.1| unknown [Zea mays]
gi|194701144|gb|ACF84656.1| unknown [Zea mays]
gi|224032577|gb|ACN35364.1| unknown [Zea mays]
gi|413951337|gb|AFW83986.1| heterogeneous nuclear
ribonucleoprotein 27C isoform 1 [Zea mays]
gi|413951338|gb|AFW83987.1| heterogeneous nuclear
ribonucleoprotein 27C isoform 2 [Zea mays]
gi|413951339|gb|AFW83988.1| heterogeneous nuclear
ribonucleoprotein 27C isoform 3 [Zea mays]
gi|413951340|gb|AFW83989.1| heterogeneous nuclear
ribonucleoprotein 27C isoform 4 [Zea mays]
gi|413951341|gb|AFW83990.1| heterogeneous nuclear
ribonucleoprotein 27C isoform 5 [Zea mays]
Length = 360
Score = 348 bits (893), Expect = 3e-93
Identities = 191/391 (48%), Positives = 238/391 (60%), Gaps = 4/391 (1%)
Frame = +1
Query: 13 KLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVLEM 192
KLVVLGIPWDVDTEGL E+M+K+G +DD +VM++R + RSRGFGYVTF+S +DAK VL+
Sbjct: 4 KLVVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFASADDAKNVLDC 63
Query: 193 DHVLNGRKLEVKVATPKEEMKTP-SKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLYM 369
+HVL R LEVKVATPKEEMK+ SKK TRIFVARIP SV E FR +FE++G I DLYM
Sbjct: 64 EHVLGSRTLEVKVATPKEEMKSQGSKKATRIFVARIPQSVDESMFRRHFEAFGEILDLYM 123
Query: 370 PKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXXX 549
PKE GSKGHRGIGFITF+++E+VD +M E+H+L G T+ +DRA PK+E ++
Sbjct: 124 PKEHGSKGHRGIGFITFQSAESVDNIMQESHELDGTTVVVDRATPKDEDVRY------PP 177
Query: 550 XXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGGL 729
TRYA + LYDH Y GY YGP A G
Sbjct: 178 SRPSQGGYGAYNAYISAATRYATLGAPTLYDHPGSAYGRGY---------YGPSQAVG-- 226
Query: 730 MGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXXX 909
KKIFVGRLPQEAN +DLR+YF FG
Sbjct: 227 ---------------------------KKIFVGRLPQEANTDDLRQYFGRFGRIVDAYIP 259
Query: 910 XXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDKYGDGHSSPV-- 1083
GHRGFGFVTF ++G+A+RVARR+HEILG +VAID+A PL++D G+ P+
Sbjct: 260 KDPKRSGHRGFGFVTFADDGVAERVARRSHEILGHEVAIDTAAPLENDSAAGGYIDPMDL 319
Query: 1084 -GAAGHPRGPHSYLGDGGYDWEPRPAGPSAR 1173
GA G R + G Y++ P+ S+R
Sbjct: 320 YGAYGSMRSFGRFCGGLDYNYGYGPSSGSSR 350
>ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform 1
[Vitis vinifera] gi|359480890|ref|XP_003632540.1|
PREDICTED: uncharacterized RNA-binding protein
C660.15-like isoform 2 [Vitis vinifera]
gi|296082418|emb|CBI21423.3| unnamed protein product
[Vitis vinifera]
Length = 359
Score = 348 bits (892), Expect = 4e-93
Identities = 200/404 (49%), Positives = 235/404 (58%), Gaps = 21/404 (5%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
+ KLVVLGIPWDVDT+GL ++MSK+G++ D+IVM++R T RSRGFGYVTF SVEDAKKVL
Sbjct: 2 DNKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTFGSVEDAKKVL 61
Query: 187 EMDHVLNGRKLEVKVATPKEEM-KTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDL 363
+H L R LEVKVATPKEEM + P KK+TRIFVARIP SV E FRSYFE+YG I DL
Sbjct: 62 SSEHFLGNRMLEVKVATPKEEMMRAPIKKVTRIFVARIPDSVNEAAFRSYFETYGEITDL 121
Query: 364 YMPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXX 543
YMPK+ GSKGHRGIGFITF ++E+VD LM ETH+LGG+ + +DRA PKEE +
Sbjct: 122 YMPKDHGSKGHRGIGFITFASAESVDNLMVETHELGGSAVVVDRATPKEEEFR------- 174
Query: 544 XXXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPG 723
TRYA + LYDH Y G +R
Sbjct: 175 PVSRVPQGGYGAYNAYITAATRYAALGAPTLYDHPGSVYGRGESTR-------------- 220
Query: 724 GLMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXX 903
MG KKIFVGRLPQEA+AEDLR+YF FG
Sbjct: 221 -AMG-------------------------KKIFVGRLPQEASAEDLRQYFGRFGRILDVY 254
Query: 904 XXXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDD----DKYGDGH 1071
GHRGFGFVTF E+G+ADRV+RR+HEI GQQVAIDSATPLDD +
Sbjct: 255 VPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGSSGNFMMDS 314
Query: 1072 SSPVGAAGHPRGPHSYL------GDGGY----------DWEPRP 1155
+ P G G P + + D GY DW RP
Sbjct: 315 AEPFGGFGGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRP 358
>ref|XP_004288032.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Fragaria
vesca subsp. vesca]
Length = 364
Score = 347 bits (890), Expect = 7e-93
Identities = 198/405 (48%), Positives = 238/405 (58%), Gaps = 22/405 (5%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
+RKLVVLGIPWD+DTEGL E+M KYG+++D IVM++R T RSRGFGYVTF+S EDAK V
Sbjct: 2 DRKLVVLGIPWDIDTEGLREYMCKYGELEDCIVMKERSTGRSRGFGYVTFASAEDAKSVA 61
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
+H L R LEVKVATPKEEM+TP++K+TRIFVARIP SVTE FRS+F YG I DLY
Sbjct: 62 SSEHFLGNRMLEVKVATPKEEMRTPARKVTRIFVARIPQSVTEANFRSHFGKYGEITDLY 121
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPKEQGSK HRGIGFITFEN+++V+ LM +TH+LGG+ + +DRA PKE+ K
Sbjct: 122 MPKEQGSKMHRGIGFITFENADSVESLMVDTHELGGSNVVVDRATPKEDDFK----PVAR 177
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRYA + LYDH G YG G + G
Sbjct: 178 MPAAQQGGYGAYNAYISAATRYAALGAPTLYDHP---------PHPGPAYGRG--ESARG 226
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
L +KIFVGRLPQEA +EDLR+YF FG
Sbjct: 227 L--------------------------SRKIFVGRLPQEATSEDLRQYFGRFGRILDVYV 260
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDD------------ 1050
GHRGFGFVTFGE+G+ADRV+RR+HEI GQQVAID+ATPLD+
Sbjct: 261 PRDPKRTGHRGFGFVTFGEDGVADRVSRRSHEICGQQVAIDTATPLDEAGTSGNFMMNNV 320
Query: 1051 DKYGDGHSSPVGAAGHPRGPHSYLGDGGY----------DWEPRP 1155
+ YG G+ PV + G + D GY DW RP
Sbjct: 321 EPYG-GYGGPVRSYSRMYGSLDF-DDWGYGMSSGRPSRADWRYRP 363
>ref|NP_001045380.2| Os01g0945800 [Oryza sativa Japonica Group]
gi|57899379|dbj|BAD88026.1| RNA-binding like protein
[Oryza sativa Japonica Group]
gi|215686359|dbj|BAG87620.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215706318|dbj|BAG93174.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255674065|dbj|BAF07294.2| Os01g0945800 [Oryza sativa
Japonica Group]
Length = 363
Score = 347 bits (890), Expect = 7e-93
Identities = 196/396 (49%), Positives = 238/396 (60%), Gaps = 4/396 (1%)
Frame = +1
Query: 13 KLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVLEM 192
KLVVLGIPWDVDTEGL E+M K+G +DD +VM++R + RSRGFGYVTFSS +DAK VLE
Sbjct: 4 KLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNVLEC 63
Query: 193 DHVLNGRKLEVKVATPKEEMKTP-SKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLYM 369
+HVL R LEVK+ATPKEEMK+ SKK TRIFVARIP SV E FR +FE+YG I DLYM
Sbjct: 64 EHVLGNRTLEVKIATPKEEMKSQGSKKATRIFVARIPQSVDESMFRRHFEAYGEITDLYM 123
Query: 370 PKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXXX 549
PKE GSKGHRGIGFITF+++E+VD +M ++H+L G T+ +DRA PK+E ++
Sbjct: 124 PKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRY-----PPS 178
Query: 550 XXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGGL 729
TRYA + LYDH G+ YG G G
Sbjct: 179 RGASQGGYGAYNAYISAATRYAALGAPTLYDHP------------GSAYGRG------GY 220
Query: 730 MGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXXX 909
GS G+ + KKIFVGRLPQEAN EDLR YF FG
Sbjct: 221 YGSSQGMGN------------------KKIFVGRLPQEANTEDLRHYFGKFGRIVDAYIP 262
Query: 910 XXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDKYGDGHSSPV-- 1083
GHRGFGFVTF + G+ADRVARR+HEILG +VAID+A PL+ D G G+ P+
Sbjct: 263 KDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAIDTAAPLEGDS-GGGYMEPMDL 321
Query: 1084 -GAAGHPRGPHSYLGDGGYDWEPRPAGPSARLPRMD 1188
GA G R + YD+ +G S+ R D
Sbjct: 322 YGAYGSMRTYGRFCSGIDYDYGYGHSGSSSSRSRAD 357
Score = 104 bits (260), Expect = 8e-20
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 50/223 (22%)
Frame = +1
Query: 1 ERERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKK 180
++ ++ V IP VD H YG+I D+ + ++ + RG G++TF S E
Sbjct: 89 KKATRIFVARIPQSVDESMFRRHFEAYGEITDLYMPKEHGSKGHRGIGFITFQSAESVDS 148
Query: 181 VLEMDHVLNGRKLEVKVATPK-EEMKTPSKK----------------------------- 270
+++ H L+G + V ATPK EE++ P +
Sbjct: 149 IMQDSHELDGTTVVVDRATPKDEEVRYPPSRGASQGGYGAYNAYISAATRYAALGAPTLY 208
Query: 271 --------------------ITRIFVARIPSSVTEDEFRSYFESYGNIEDLYMPKEQGSK 390
+IFV R+P ++ R YF +G I D Y+PK+
Sbjct: 209 DHPGSAYGRGGYYGSSQGMGNKKIFVGRLPQEANTEDLRHYFGKFGRIVDAYIPKDPKRS 268
Query: 391 GHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESS 519
GHRG GF+TF + D++ +H++ G +AID AAP E S
Sbjct: 269 GHRGFGFVTFADEGVADRVARRSHEILGHEVAIDTAAPLEGDS 311
>gb|EOX91426.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 4 [Theobroma
cacao]
Length = 356
Score = 347 bits (889), Expect = 1e-92
Identities = 189/367 (51%), Positives = 228/367 (62%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
+RKLVVLGIPW+VDTEGL ++MSK+GD++D IVM++R T RSRGFGYVTF+S +DAK VL
Sbjct: 2 DRKLVVLGIPWEVDTEGLRKYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASADDAKNVL 61
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
++H L R LEVK+ATPKEEM+ P+KK+TRIFVARIP SV E FRS+FE YG I DLY
Sbjct: 62 SIEHFLGERMLEVKIATPKEEMRAPAKKVTRIFVARIPPSVDESTFRSHFEEYGEITDLY 121
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPK+Q SK HRGIGFITF ++++V+ LM++TH+LGG+T+ +DRA PK K
Sbjct: 122 MPKDQASKAHRGIGFITFASADSVENLMTDTHELGGSTVVVDRATPKANDFK-------P 174
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRYA + LYDH P Y G +R G G
Sbjct: 175 IGRMSQGGYGAYNAYISAATRYAALGAPTLYDHPGPVYGRGESTR-GMG----------- 222
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
KKIFVGRLPQEANAEDLR+YF FG
Sbjct: 223 ----------------------------KKIFVGRLPQEANAEDLRQYFGRFGRILDVYV 254
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDDDKYGDGHSSPVG 1086
GHRGFGFVTF E+G+ADRV+RR+HEI GQQVAIDSATP+DD G S +
Sbjct: 255 PKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPVDD----AGPSFMMN 310
Query: 1087 AAGHPRG 1107
AG RG
Sbjct: 311 PAGPYRG 317
>gb|ACJ85509.1| unknown [Medicago truncatula] gi|388503058|gb|AFK39595.1| unknown
[Medicago truncatula]
Length = 397
Score = 347 bits (889), Expect = 1e-92
Identities = 195/390 (50%), Positives = 234/390 (60%), Gaps = 13/390 (3%)
Frame = +1
Query: 7 ERKLVVLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVL 186
+RKLVVLGIPWDVDTEGL+E+MSKYG+++D IVM++R T RSRGFGYVTF+SV+DAK+VL
Sbjct: 3 QRKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVL 62
Query: 187 EMDHVLNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLY 366
+HVL R LEVKVATPKEEM+ P+KK+TRIFVARIP SVTE+ FRS+FE YG+I DL
Sbjct: 63 SGEHVLGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYGDITDLC 122
Query: 367 MPKEQGSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXX 546
MPK+QGSK HRGIGFITF N+E+V+ LMSETH+LGG+ + +DRA PKE+ K
Sbjct: 123 MPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKEDDVK------PT 176
Query: 547 XXXXXXXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYGSRMGAGYGYGPLHAPGG 726
TRYA + LYDH P Y G R
Sbjct: 177 GRMSQGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRR--------------- 221
Query: 727 LMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXXX 906
KKIFVGRLP EAN+EDLR+YF FG
Sbjct: 222 -------------------------RISKKIFVGRLPPEANSEDLRQYFGRFGRIEDVCI 256
Query: 907 XXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDD------------ 1050
GHRGFGFVTF + G+ADRV+ R HEI G +VAIDSATP+DD
Sbjct: 257 PRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGHEVAIDSATPVDDARPSGNFMMNNS 316
Query: 1051 -DKYGDGHSSPVGAAGHPRGPHSYLGDGGY 1137
+ +G G+ PV + G G Y D GY
Sbjct: 317 MESFG-GYGGPVRSYGRMYGGLDY-DDWGY 344
>ref|XP_001785814.1| predicted protein [Physcomitrella patens] gi|162662538|gb|EDQ49378.1|
predicted protein [Physcomitrella patens]
Length = 382
Score = 347 bits (889), Expect = 1e-92
Identities = 195/385 (50%), Positives = 231/385 (60%), Gaps = 13/385 (3%)
Frame = +1
Query: 22 VLGIPWDVDTEGLEEHMSKYGDIDDIIVMRDRKTNRSRGFGYVTFSSVEDAKKVLEMDHV 201
VLGIPWD+DTEGL ++M K+G++DD+IVM+DR T RSRGFGYVTF++VEDAKK + H
Sbjct: 1 VLGIPWDIDTEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGYVTFAAVEDAKKAVSTQHS 60
Query: 202 LNGRKLEVKVATPKEEMKTPSKKITRIFVARIPSSVTEDEFRSYFESYGNIEDLYMPKEQ 381
LNGR LEVKVATPKEEMK P+KKITR+FVARIP SVT++ FRSYFE YG + D YMPK+Q
Sbjct: 61 LNGRMLEVKVATPKEEMKPPAKKITRVFVARIPPSVTDEAFRSYFEKYGTLTDAYMPKDQ 120
Query: 382 GSKGHRGIGFITFENSETVDKLMSETHKLGGATIAIDRAAPKEESSKHWXXXXXXXXXXX 561
GSK HRGIGF+TFEN E+VD LM+ETH+LGG+TIA+DRA PKE+ K W
Sbjct: 121 GSKAHRGIGFVTFENPESVDNLMNETHELGGSTIAVDRATPKEDGVKTWG---------- 170
Query: 562 XXXXXXXXXXXXXXTRYAHMAPSALYDHASPGYRDGYG-----SRMGA-GYGYGPLHAPG 723
R H +A G YG +R G G G+G G
Sbjct: 171 ---------------RGFHGGNQNSASNAGSGAYGAYGVYTNAARFGGLGGGFGAYDYSG 215
Query: 724 GLMGSPYGVPDRXXXXXXXXXXXXXXXXXKKIFVGRLPQEANAEDLRRYFSSFGTXXXXX 903
GSP P R KIFVGRLP EANAEDLRRYF++FG
Sbjct: 216 SGFGSPPIPPLR--------------GLGTKIFVGRLPPEANAEDLRRYFNNFGRISDVY 261
Query: 904 XXXXXXXXGHRGFGFVTFGENGIADRVARRAHEILGQQVAIDSATPLDD-------DKYG 1062
HRGFGFVTF + G A+RVA R HEILG Q+A+D A P D+ G
Sbjct: 262 VPKDAKKTSHRGFGFVTFSDEGAAERVALRNHEILGHQIAVDRAAPQDETANVPYMSGVG 321
Query: 1063 DGHSSPVGAAGHPRGPHSYLGDGGY 1137
S GA G RG ++ L GY
Sbjct: 322 GVGSLSGGAGGPMRGSNAPLQGSGY 346