BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00001626
         (1356 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      177   9e-42
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                      177   9e-42
gb|AAO73527.1| gag-pol polyprotein [Glycine max]                      177   9e-42
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      176   3e-41
gb|AAO73525.1| gag-pol polyprotein [Glycine max]                      173   1e-40
gb|AAC64917.1| gag-pol polyprotein [Glycine max]                      172   4e-40
gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymera...   167   1e-38
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...   166   2e-38
ref|XP_004310161.1| PREDICTED: uncharacterized protein LOC101309...   166   2e-38
gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana]                166   3e-38
ref|XP_004498716.1| PREDICTED: uncharacterized protein LOC101504...   164   6e-38
emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]   164   6e-38
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  163   1e-37
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]         163   1e-37
gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays]              163   1e-37
gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis]           163   1e-37
gb|ABF67921.1| Ji1 putative pol protein [Zea mays]                    163   1e-37
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]                163   1e-37
gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Grou...   162   2e-37
emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera]   162   2e-37

>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  177 bits (449), Expect = 9e-42
 Identities = 86/152 (56%), Positives = 109/152 (71%)
 Frame = -1

Query: 1353 DADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLKN 1174
            DADWAG  +DRKSTSG CF LG NLI+W S+KQ CV+LSTAE+EYIAA    +Q VW+K 
Sbjct: 1423 DADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1482

Query: 1173 WLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYVS 994
             L        + + +YCDN SAI++SKN V H RTKHIDIR+HY+R  V DK +T+K+V 
Sbjct: 1483 MLKEYNVE-QDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVD 1541

Query: 993  TRNQLADIFTKALSKDRFLYLRNKLNMHYLDD 898
            T  Q+ADIFTKAL  ++F  LR KL +  L++
Sbjct: 1542 TEEQIADIFTKALDANQFEKLRGKLGICLLEE 1573


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  177 bits (449), Expect = 9e-42
 Identities = 86/152 (56%), Positives = 109/152 (71%)
 Frame = -1

Query: 1353 DADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLKN 1174
            DADWAG  +DRKSTSG CF LG NLI+W S+KQ CV+LSTAE+EYIAA    +Q VW+K 
Sbjct: 1425 DADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1484

Query: 1173 WLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYVS 994
             L        + + +YCDN SAI++SKN V H RTKHIDIR+HY+R  V DK +T+K+V 
Sbjct: 1485 MLKEYNVE-QDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVD 1543

Query: 993  TRNQLADIFTKALSKDRFLYLRNKLNMHYLDD 898
            T  Q+ADIFTKAL  ++F  LR KL +  L++
Sbjct: 1544 TEEQIADIFTKALDANQFEKLRGKLGICVLEE 1575


>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  177 bits (449), Expect = 9e-42
 Identities = 86/152 (56%), Positives = 109/152 (71%)
 Frame = -1

Query: 1353 DADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLKN 1174
            DADWAG  +DRKSTSG CF LG NLI+W S+KQ CV+LSTAE+EYIAA    +Q VW+K 
Sbjct: 1425 DADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1484

Query: 1173 WLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYVS 994
             L        + + +YCDN SAI++SKN V H RTKHIDIR+HY+R  V DK +T+K+V 
Sbjct: 1485 MLKEYNVE-QDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVD 1543

Query: 993  TRNQLADIFTKALSKDRFLYLRNKLNMHYLDD 898
            T  Q+ADIFTKAL  ++F  LR KL +  L++
Sbjct: 1544 TEEQIADIFTKALDANQFEKLRGKLGICLLEE 1575


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  176 bits (445), Expect = 3e-41
 Identities = 85/152 (55%), Positives = 109/152 (71%)
 Frame = -1

Query: 1353 DADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLKN 1174
            DADWAG  +DRKSTSG CF LG NLI+W S+KQ CV+LSTAE+EYIAA    +Q VW+K 
Sbjct: 1426 DADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1485

Query: 1173 WLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYVS 994
             L        + + +YCDN SAI++SKN V H RTKHIDIR+HY+R+ V DK +T+++V 
Sbjct: 1486 MLKEYNVE-QDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRELVDDKVITLEHVD 1544

Query: 993  TRNQLADIFTKALSKDRFLYLRNKLNMHYLDD 898
            T  Q+ADIFTKAL   +F  LR KL +  L++
Sbjct: 1545 TEEQIADIFTKALDAKQFEKLRGKLGICLLEE 1576


>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  173 bits (439), Expect = 1e-40
 Identities = 85/152 (55%), Positives = 107/152 (70%)
 Frame = -1

Query: 1353 DADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLKN 1174
            DADWAG  +DRK TSG CF LG NLI+W S+KQ CV+LSTAE+EYIAA    +Q VW+K 
Sbjct: 1425 DADWAGSADDRKCTSGGCFYLGTNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1484

Query: 1173 WLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYVS 994
             L        + + +YCDN SAI++SKN V H RTKHIDIR+HY+R  V DK +T+++V 
Sbjct: 1485 MLKEYNVE-QDVMTLYCDNMSAINISKNPVQHNRTKHIDIRHHYIRDLVDDKIITLEHVD 1543

Query: 993  TRNQLADIFTKALSKDRFLYLRNKLNMHYLDD 898
            T  Q+ADIFTKAL  ++F  LR KL    L+D
Sbjct: 1544 TEEQVADIFTKALDANQFEKLRGKLGTCLLED 1575


>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
          Length = 1550

 Score =  172 bits (435), Expect = 4e-40
 Identities = 84/152 (55%), Positives = 107/152 (70%)
 Frame = -1

Query: 1353 DADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLKN 1174
            DADWAG  +DRKST G CF LG N I+W S+KQ CV+LSTAE+EYIAA    +Q VW+K 
Sbjct: 1399 DADWAGSVDDRKSTFGGCFYLGTNFISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQ 1458

Query: 1173 WLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYVS 994
             L        + + +YCDN SAI++SKN V H RTKHIDIR+HY+R  V DK +T+++V 
Sbjct: 1459 MLKEYNVE-QDVMTLYCDNLSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLEHVD 1517

Query: 993  TRNQLADIFTKALSKDRFLYLRNKLNMHYLDD 898
            T  Q+ADIFTKAL  ++F  LR KL +  L+D
Sbjct: 1518 TEEQIADIFTKALDANQFEKLRGKLGICLLED 1549


>gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
            [Medicago truncatula]
          Length = 1654

 Score =  167 bits (422), Expect = 1e-38
 Identities = 75/152 (49%), Positives = 112/152 (73%)
 Frame = -1

Query: 1353 DADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLKN 1174
            DAD+AGD  +RKSTSG C  LGENLI+W+S++Q  +A+STAE+EYI+A+ C TQ +W+K+
Sbjct: 1504 DADYAGDRIERKSTSGNCQFLGENLISWASKRQVTIAMSTAEAEYISAASCCTQLLWMKH 1563

Query: 1173 WLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYVS 994
             L +   +    IPIYCDN +AI +SKN ++H R KHI+I++H++R  V    + ++++ 
Sbjct: 1564 QLEDYQINANS-IPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDLQFID 1622

Query: 993  TRNQLADIFTKALSKDRFLYLRNKLNMHYLDD 898
            T +Q ADIFTK LS +RF +++  LNMH++ D
Sbjct: 1623 TEHQWADIFTKPLSVERFDFIKKNLNMHFVSD 1654


>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score =  166 bits (421), Expect = 2e-38
 Identities = 75/152 (49%), Positives = 111/152 (73%)
 Frame = -1

Query: 1353 DADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLKN 1174
            DAD+AGD  +RKSTSG C  LGENLI+W+S++Q  +A+STAE+EYI+A+ C TQ +W+K+
Sbjct: 1565 DADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKH 1624

Query: 1173 WLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYVS 994
             L +   +    IPIYCDN + I +SKN ++H R KHI+I++H++R  V    + I+++ 
Sbjct: 1625 QLEDYQINANS-IPIYCDNTAVICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFID 1683

Query: 993  TRNQLADIFTKALSKDRFLYLRNKLNMHYLDD 898
            T +Q ADIFTK LS +RF +++  LNMH++ D
Sbjct: 1684 TEHQWADIFTKPLSVERFDFIKKNLNMHFVSD 1715


>ref|XP_004310161.1| PREDICTED: uncharacterized protein LOC101309698 [Fragaria vesca
            subsp. vesca]
          Length = 1541

 Score =  166 bits (420), Expect = 2e-38
 Identities = 75/142 (52%), Positives = 103/142 (72%)
 Frame = -1

Query: 1356 SDADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLK 1177
            +D+DWAGD NDRKSTSG CF +G NL++W S+KQ C +LSTA++EY+AA  C TQ +W+K
Sbjct: 1391 TDSDWAGDANDRKSTSGGCFFVGNNLVSWHSKKQNCTSLSTAQAEYVAAGSCCTQLMWMK 1450

Query: 1176 NWLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYV 997
              +A+ GF     + ++CDN SAI++SKN V+H RTKHI+IRYH +R  V +K + + ++
Sbjct: 1451 QMVADYGFQ-QGTLSLFCDNTSAINISKNPVLHSRTKHIEIRYHLIRGLVEEKLLELTFI 1509

Query: 996  STRNQLADIFTKALSKDRFLYL 931
             T  QLAD+FTK L   R L L
Sbjct: 1510 PTEKQLADLFTKPLDNARHLSL 1531


>gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana]
          Length = 1463

 Score =  166 bits (419), Expect = 3e-38
 Identities = 78/141 (55%), Positives = 104/141 (73%)
 Frame = -1

Query: 1353 DADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLKN 1174
            DADWAG+ +DR+ST+G CF L  NL++W S+KQ CV+LSTAE+EYIA   C TQ +W+K 
Sbjct: 1324 DADWAGNLDDRRSTTGGCFFLRNNLVSWHSKKQSCVSLSTAEAEYIALGSCCTQLLWMKQ 1383

Query: 1173 WLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYVS 994
             L + G   +  + +YCDN SAI++SKN V H RTKHIDIR+H++R+ V +K V I +VS
Sbjct: 1384 MLLDYGM-TSNTLLVYCDNMSAINISKNPVQHSRTKHIDIRHHFIRELVENKIVEISHVS 1442

Query: 993  TRNQLADIFTKALSKDRFLYL 931
            +  QLADIFTK+L  + FL L
Sbjct: 1443 SEKQLADIFTKSLDLNSFLNL 1463


>ref|XP_004498716.1| PREDICTED: uncharacterized protein LOC101504373 [Cicer arietinum]
          Length = 340

 Score =  164 bits (416), Expect = 6e-38
 Identities = 79/153 (51%), Positives = 113/153 (73%)
 Frame = -1

Query: 1353 DADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLKN 1174
            D+D+AG   DRKSTSG C +LG +L++W S+KQ  +ALST E+EYIAA  C  Q +W+K 
Sbjct: 189  DSDFAGCKLDRKSTSGTCHLLGNSLVSWFSKKQTSIALSTTEAEYIAAGSCCAQILWMKQ 248

Query: 1173 WLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYVS 994
             L++ G  +   +PI CDN SAIS++KNSVMH RTKHI++R+H++R +  +  + ++YV+
Sbjct: 249  HLSDFGVDLGT-VPILCDNTSAISITKNSVMHSRTKHIEVRHHFIRDQFQNGIIKLEYVN 307

Query: 993  TRNQLADIFTKALSKDRFLYLRNKLNMHYLDDS 895
            T +QLADIFTKAL ++ FL++R KL   +LD S
Sbjct: 308  TADQLADIFTKALPRESFLHIRMKLG--FLDPS 338


>emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]
          Length = 956

 Score =  164 bits (416), Expect = 6e-38
 Identities = 77/148 (52%), Positives = 104/148 (70%)
 Frame = -1

Query: 1356 SDADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLK 1177
            +DADWAG+ +DRKSTSG CF +G  L+ W S+KQ  V+LSTAE+EYIAA  C +Q +W+K
Sbjct: 806  TDADWAGNXDDRKSTSGGCFYIGNCLVAWMSKKQNSVSLSTAEAEYIAAGSCCSQLLWIK 865

Query: 1176 NWLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYV 997
              L + G      + ++CDN SAI++SKN V+H RTKHIDIR+H++R  V DK V+++YV
Sbjct: 866  QMLRBYGID-QGTMVVFCDNTSAINISKNPVLHSRTKHIDIRHHFIRDLVEDKVVSLEYV 924

Query: 996  STRNQLADIFTKALSKDRFLYLRNKLNM 913
             T  Q+ADI TK L   RF  LR  + +
Sbjct: 925  PTEGQIADILTKPLDVSRFESLRKSIGL 952


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  163 bits (413), Expect = 1e-37
 Identities = 77/148 (52%), Positives = 106/148 (71%)
 Frame = -1

Query: 1356 SDADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLK 1177
            SDADWAG   +RKSTSG C  LG +L++W+S+KQ  VALSTAE+EYIAA  C  Q +W++
Sbjct: 909  SDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMR 968

Query: 1176 NWLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYV 997
              L + G+ +T+ +P+ CDN+SAI M+ N V H RTKHI IRYH++R       + I Y+
Sbjct: 969  QTLLDYGYKLTK-VPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYI 1027

Query: 996  STRNQLADIFTKALSKDRFLYLRNKLNM 913
            +T++QLADIFTK L +  F  LR++LN+
Sbjct: 1028 NTKDQLADIFTKPLDEQSFTRLRHELNI 1055


>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
          Length = 1760

 Score =  163 bits (413), Expect = 1e-37
 Identities = 77/148 (52%), Positives = 106/148 (71%)
 Frame = -1

Query: 1356 SDADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLK 1177
            SDADWAG   +RKSTSG C  LG +L++W+S+KQ  VALSTAE+EYIAA  C  Q +W++
Sbjct: 1606 SDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMR 1665

Query: 1176 NWLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYV 997
              L + G+ +T+ +P+ CDN+SAI M+ N V H RTKHI IRYH++R       + I Y+
Sbjct: 1666 QTLRDYGYKLTK-VPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYI 1724

Query: 996  STRNQLADIFTKALSKDRFLYLRNKLNM 913
            +T++QLADIFTK L +  F  LR++LN+
Sbjct: 1725 NTKDQLADIFTKPLDEQTFTKLRHELNI 1752


>gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays]
          Length = 1553

 Score =  163 bits (413), Expect = 1e-37
 Identities = 77/148 (52%), Positives = 107/148 (72%)
 Frame = -1

Query: 1356 SDADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLK 1177
            SD+D+AG   DRKSTSG C  LG +L++WSS+KQ  VALSTAE+EY+AA QC  Q +W++
Sbjct: 1400 SDSDYAGCKVDRKSTSGTCQFLGRSLVSWSSKKQTSVALSTAEAEYVAAGQCCAQLLWMR 1459

Query: 1176 NWLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYV 997
              L + G+++ + +P+ CDN+SAI M+ N V H RTKHIDIR+H++R       + + YV
Sbjct: 1460 QTLRDFGYNLNK-VPLLCDNESAIRMADNPVEHSRTKHIDIRHHFLRDHQQKGDIEVFYV 1518

Query: 996  STRNQLADIFTKALSKDRFLYLRNKLNM 913
            ST NQLADIFTK L +  F  LR+++N+
Sbjct: 1519 STENQLADIFTKPLDESTFCRLRSEINV 1546


>gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis]
          Length = 1063

 Score =  163 bits (413), Expect = 1e-37
 Identities = 77/148 (52%), Positives = 106/148 (71%)
 Frame = -1

Query: 1356 SDADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLK 1177
            SDADWAG   +RKSTSG C  LG +L++W+S+KQ  VALSTAE+EYIAA  C  Q +W++
Sbjct: 909  SDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMR 968

Query: 1176 NWLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYV 997
              L + G+ +T+ +P+ CDN+SAI M+ N V H RTKHI IRYH++R       + I Y+
Sbjct: 969  QTLRDYGYKLTK-VPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYI 1027

Query: 996  STRNQLADIFTKALSKDRFLYLRNKLNM 913
            +T++QLADIFTK L +  F  LR++LN+
Sbjct: 1028 NTKDQLADIFTKPLDEQTFTKLRHELNI 1055


>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
          Length = 1063

 Score =  163 bits (413), Expect = 1e-37
 Identities = 77/148 (52%), Positives = 106/148 (71%)
 Frame = -1

Query: 1356 SDADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLK 1177
            SDADWAG   +RKSTSG C  LG +L++W+S+KQ  VALSTAE+EYIAA  C  Q +W++
Sbjct: 909  SDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMR 968

Query: 1176 NWLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYV 997
              L + G+ +T+ +P+ CDN+SAI M+ N V H RTKHI IRYH++R       + I Y+
Sbjct: 969  QTLRDYGYKLTK-VPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYI 1027

Query: 996  STRNQLADIFTKALSKDRFLYLRNKLNM 913
            +T++QLADIFTK L +  F  LR++LN+
Sbjct: 1028 NTKDQLADIFTKPLDEQSFTRLRHELNI 1055


>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
          Length = 1892

 Score =  163 bits (413), Expect = 1e-37
 Identities = 77/148 (52%), Positives = 106/148 (71%)
 Frame = -1

Query: 1356 SDADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLK 1177
            SDADWAG   +RKSTSG C  LG +L++W+S+KQ  VALSTAE+EYIAA  C  Q +W++
Sbjct: 1738 SDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMR 1797

Query: 1176 NWLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYV 997
              L + G+ +T+ +P+ CDN+SAI M+ N V H RTKHI IRYH++R       + I Y+
Sbjct: 1798 QTLRDYGYKLTK-VPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYI 1856

Query: 996  STRNQLADIFTKALSKDRFLYLRNKLNM 913
            +T++QLADIFTK L +  F  LR++LN+
Sbjct: 1857 NTKDQLADIFTKPLDEQSFTRLRHELNI 1884


>gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Group]
            gi|31431391|gb|AAP53179.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1299

 Score =  162 bits (411), Expect = 2e-37
 Identities = 78/148 (52%), Positives = 104/148 (70%)
 Frame = -1

Query: 1356 SDADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLK 1177
            SD+D+AG   DRKSTSG C MLG +L++WSS+KQ  VALSTAE+EY++A  C  Q +W+K
Sbjct: 1146 SDSDYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMK 1205

Query: 1176 NWLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYV 997
              L + G   T+  P+ CDN SAI ++ N V H RTKHIDIR+H++R  V    + I ++
Sbjct: 1206 QILLDYGISFTKT-PLLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHVVKSDIVISHI 1264

Query: 996  STRNQLADIFTKALSKDRFLYLRNKLNM 913
             T +QLADIFTK L + RF  LRN+LN+
Sbjct: 1265 RTEDQLADIFTKPLDETRFCKLRNELNV 1292


>emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera]
          Length = 324

 Score =  162 bits (411), Expect = 2e-37
 Identities = 77/148 (52%), Positives = 104/148 (70%)
 Frame = -1

Query: 1356 SDADWAGDHNDRKSTSGQCFMLGENLITWSSRKQECVALSTAESEYIAASQCTTQAVWLK 1177
            +DADWAG+ +DRKSTSG CF +G  L+ W S+KQ  V+LSTAE+EYIAA  C +Q +W+K
Sbjct: 174  TDADWAGNVDDRKSTSGGCFYIGNCLVAWMSKKQNSVSLSTAEAEYIAAGSCCSQLLWIK 233

Query: 1176 NWLANLGFHITEPIPIYCDNQSAISMSKNSVMHKRTKHIDIRYHYMRQKVHDKTVTIKYV 997
              L + G      + ++CDN SAI++SKN V+H RTKHIDIR+H++R  V DK V+++YV
Sbjct: 234  QMLRDYGIDQGTMV-VFCDNTSAINISKNPVLHSRTKHIDIRHHFIRDLVEDKVVSLEYV 292

Query: 996  STRNQLADIFTKALSKDRFLYLRNKLNM 913
             T  Q+ADI TK L   RF  LR  + +
Sbjct: 293  PTEGQIADILTKPLDVSRFESLRKSIGL 320