BLASTX nr result

ID: Ephedra28_contig00001625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00001625
         (359 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004310161.1| PREDICTED: uncharacterized protein LOC101309...   138   9e-31
ref|XP_002447687.1| hypothetical protein SORBIDRAFT_06g013016 [S...   137   1e-30
gb|AAL31657.1|AC079179_12 Putative Zea mays retrotransposon Opie...   137   1e-30
gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays]              135   4e-30
gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]                135   4e-30
gb|AEJ07944.1| Opie1 putative pol protein [Zea diploperennis]         135   7e-30
gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana]                135   7e-30
gb|AAP53706.1| retrotransposon protein, putative, unclassified [...   134   1e-29
gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]           134   1e-29
gb|AEJ07927.1| Opie2 pol protein [Zea mays subsp. mexicana]           134   1e-29
gb|ABF67946.1| putative Opie4 pol protein [Zea mays]                  134   1e-29
gb|ABF67947.1| Opie2 pol protein [Zea mays]                           134   1e-29
gb|ABB46911.2| retrotransposon protein, putative, unclassified [...   134   1e-29
gb|ABA98230.2| retrotransposon protein, putative, unclassified [...   134   1e-29
gb|ABF95221.1| retrotransposon protein, putative, unclassified [...   134   1e-29
gb|AAM01150.2|AC113336_2 Putative retroelement [Oryza sativa Jap...   134   1e-29
gb|AAC49502.1| Pol [Zea mays]                                         134   1e-29
emb|CCI55376.1| PH01B035L11.21 [Phyllostachys edulis]                 134   2e-29
emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera]   134   2e-29
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  133   3e-29

>ref|XP_004310161.1| PREDICTED: uncharacterized protein LOC101309698 [Fragaria vesca
            subsp. vesca]
          Length = 1541

 Score =  138 bits (347), Expect = 9e-31
 Identities = 63/119 (52%), Positives = 85/119 (71%)
 Frame = +2

Query: 2    LDLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTA 181
            LD GI Y     + + G++D+DWAGD NDRKSTSG CF +G NL++W S KQ C +LSTA
Sbjct: 1373 LDHGIKYTFDTNVEIAGYTDSDWAGDANDRKSTSGGCFFVGNNLVSWHSKKQNCTSLSTA 1432

Query: 182  ESEYIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            ++EY+AA  C TQ +W+K  +A+ GF     + +FCDN SAI++SKN V+H  TKHI+I
Sbjct: 1433 QAEYVAAGSCCTQLMWMKQMVADYGFQ-QGTLSLFCDNTSAINISKNPVLHSRTKHIEI 1490


>ref|XP_002447687.1| hypothetical protein SORBIDRAFT_06g013016 [Sorghum bicolor]
           gi|241938870|gb|EES12015.1| hypothetical protein
           SORBIDRAFT_06g013016 [Sorghum bicolor]
          Length = 319

 Score =  137 bits (346), Expect = 1e-30
 Identities = 63/118 (53%), Positives = 84/118 (71%)
 Frame = +2

Query: 5   DLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAE 184
           +LG+WY +G   NL+G+SD+D+AG   DRKSTSG C  LG +L++WSS KQ CVALSTAE
Sbjct: 168 NLGLWYPKGSKFNLLGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWSSKKQNCVALSTAE 227

Query: 185 SEYIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
           +EYIAA  C  Q +W++  L + G    + IP+ CDN+SAI ++ N V H  TKHID+
Sbjct: 228 AEYIAAGACCAQLLWMRQTLRDFGCQFTK-IPLLCDNESAIKLANNPVSHSRTKHIDV 284


>gb|AAL31657.1|AC079179_12 Putative Zea mays retrotransposon Opie-2 [Oryza sativa]
           gi|20042883|gb|AAM08711.1|AC116601_4 Putative Zea mays
           retrotransposon Opie-2 [Oryza sativa Japonica Group]
           gi|31429916|gb|AAP51900.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 494

 Score =  137 bits (345), Expect = 1e-30
 Identities = 67/119 (56%), Positives = 82/119 (68%)
 Frame = +2

Query: 2   LDLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTA 181
           L+ GIWY     I L G+SDAD+ G   DRKSTSG C  LG +LI WSS KQ  VA STA
Sbjct: 323 LEFGIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTA 382

Query: 182 ESEYIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
           ESEY+AA+ C +Q +WL + L + G    E +P+FCDN SAI+++KN V H HTKHIDI
Sbjct: 383 ESEYVAAASCCSQILWLLSTLKDYGL-TFEKVPLFCDNTSAINIAKNPVQHSHTKHIDI 440


>gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays]
          Length = 1553

 Score =  135 bits (341), Expect = 4e-30
 Identities = 63/116 (54%), Positives = 84/116 (72%)
 Frame = +2

Query: 11   GIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAESE 190
            GIWY +G   +LIG+SD+D+AG   DRKSTSG C  LG +L++WSS KQ  VALSTAE+E
Sbjct: 1385 GIWYPKGSTFDLIGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWSSKKQTSVALSTAEAE 1444

Query: 191  YIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            Y+AA QC  Q +W++  L + G++ +  +P+ CDN+SAI M+ N V H  TKHIDI
Sbjct: 1445 YVAAGQCCAQLLWMRQTLRDFGYN-LNKVPLLCDNESAIRMADNPVEHSRTKHIDI 1499


>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
          Length = 2319

 Score =  135 bits (341), Expect = 4e-30
 Identities = 63/118 (53%), Positives = 83/118 (70%)
 Frame = +2

Query: 5    DLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAE 184
            +LG+WY +G   +L+G+SD+D+AG   DRKST+G C  LG +L++WSS KQ CVALSTAE
Sbjct: 1652 NLGLWYPKGSFFDLLGYSDSDYAGCKVDRKSTTGTCQFLGRSLVSWSSKKQNCVALSTAE 1711

Query: 185  SEYIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            +EYIAA  C  Q +W+K  L + G      IP+ CDN+SAI ++ N V H  TKHIDI
Sbjct: 1712 AEYIAAGACCAQLLWMKQTLRDFGCE-FNKIPLLCDNESAIKLANNPVQHSRTKHIDI 1768


>gb|AEJ07944.1| Opie1 putative pol protein [Zea diploperennis]
          Length = 1065

 Score =  135 bits (339), Expect = 7e-30
 Identities = 62/116 (53%), Positives = 85/116 (73%)
 Frame = +2

Query: 11   GIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAESE 190
            GIWY +G   +LIG+SD+D+AG   DRKSTSG C  LG +L++WSS KQ  VALSTAE+E
Sbjct: 897  GIWYPKGSTFDLIGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWSSKKQTSVALSTAEAE 956

Query: 191  YIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            Y+AA QC  Q +W++  L + G++ +  +P+ CDN+SAI +++N V H  TKHIDI
Sbjct: 957  YVAAGQCCVQLLWMRQTLRDFGYN-LSKVPLLCDNESAIRIAENPVEHSRTKHIDI 1011


>gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana]
          Length = 1463

 Score =  135 bits (339), Expect = 7e-30
 Identities = 62/118 (52%), Positives = 83/118 (70%)
 Frame = +2

Query: 5    DLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAE 184
            D+G++Y +    NL+GF DADWAG+ +DR+ST+G CF L  NL++W S KQ CV+LSTAE
Sbjct: 1306 DVGLFYSKQTNQNLVGFCDADWAGNLDDRRSTTGGCFFLRNNLVSWHSKKQSCVSLSTAE 1365

Query: 185  SEYIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            +EYIA   C TQ +W+K  L + G      + ++CDN SAI++SKN V H  TKHIDI
Sbjct: 1366 AEYIALGSCCTQLLWMKQMLLDYGM-TSNTLLVYCDNMSAINISKNPVQHSRTKHIDI 1422


>gb|AAP53706.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1419

 Score =  134 bits (337), Expect = 1e-29
 Identities = 66/119 (55%), Positives = 81/119 (68%)
 Frame = +2

Query: 2    LDLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTA 181
            L+ GIWY     I L G+SDAD+ G   DRKSTSG C  LG +LI WSS KQ  VA STA
Sbjct: 1248 LEFGIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTA 1307

Query: 182  ESEYIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            ESEY+AA+ C +Q +WL + L + G    E +P+FCDN SAI+++KN V H  TKHIDI
Sbjct: 1308 ESEYVAAASCCSQILWLLSTLKDYGI-TFEKVPLFCDNTSAINIAKNPVQHSRTKHIDI 1365


>gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]
          Length = 1048

 Score =  134 bits (337), Expect = 1e-29
 Identities = 60/116 (51%), Positives = 85/116 (73%)
 Frame = +2

Query: 11   GIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAESE 190
            G+WY +G   +L+G+SD+D+AG   DRKSTSG C  LG +L++W+S KQ  VALSTAE+E
Sbjct: 880  GLWYPKGSTFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAE 939

Query: 191  YIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            Y+AA QC  Q +W++  L + G++ +  +P+ CDN+SAI M++N V H  TKHIDI
Sbjct: 940  YVAAGQCCAQLLWMRQTLRDFGYN-LSKVPLLCDNESAIRMAENPVEHSRTKHIDI 994


>gb|AEJ07927.1| Opie2 pol protein [Zea mays subsp. mexicana]
          Length = 1048

 Score =  134 bits (337), Expect = 1e-29
 Identities = 60/116 (51%), Positives = 85/116 (73%)
 Frame = +2

Query: 11   GIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAESE 190
            G+WY +G   +L+G+SD+D+AG   DRKSTSG C  LG +L++W+S KQ  VALSTAE+E
Sbjct: 880  GLWYPKGSTFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAE 939

Query: 191  YIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            Y+AA QC  Q +W++  L + G++ +  +P+ CDN+SAI M++N V H  TKHIDI
Sbjct: 940  YVAAGQCCAQLLWMRQTLRDFGYN-LSKVPLLCDNESAIRMAENPVEHSRTKHIDI 994


>gb|ABF67946.1| putative Opie4 pol protein [Zea mays]
          Length = 1068

 Score =  134 bits (337), Expect = 1e-29
 Identities = 60/116 (51%), Positives = 85/116 (73%)
 Frame = +2

Query: 11   GIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAESE 190
            G+WY +G   +L+G+SD+D+AG   DRKSTSG C  LG +L++W+S KQ  VALSTAE+E
Sbjct: 900  GLWYPKGSTFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAE 959

Query: 191  YIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            Y+AA QC  Q +W++  L + G++ +  +P+ CDN+SAI M++N V H  TKHIDI
Sbjct: 960  YVAAGQCCAQLLWMRQTLRDFGYN-LSKVPLLCDNESAIRMAENPVEHSRTKHIDI 1014


>gb|ABF67947.1| Opie2 pol protein [Zea mays]
          Length = 1048

 Score =  134 bits (337), Expect = 1e-29
 Identities = 60/116 (51%), Positives = 85/116 (73%)
 Frame = +2

Query: 11   GIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAESE 190
            G+WY +G   +L+G+SD+D+AG   DRKSTSG C  LG +L++W+S KQ  VALSTAE+E
Sbjct: 880  GLWYPKGSTFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAE 939

Query: 191  YIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            Y+AA QC  Q +W++  L + G++ +  +P+ CDN+SAI M++N V H  TKHIDI
Sbjct: 940  YVAAGQCCAQLLWMRQTLRDFGYN-LSKVPLLCDNESAIRMAENPVEHSRTKHIDI 994


>gb|ABB46911.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  134 bits (337), Expect = 1e-29
 Identities = 66/119 (55%), Positives = 81/119 (68%)
 Frame = +2

Query: 2    LDLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTA 181
            L+ GIWY     I L G+SDAD+ G   DRKSTSG C  LG +LI WSS KQ  VA STA
Sbjct: 1320 LEFGIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTA 1379

Query: 182  ESEYIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            ESEY+AA+ C +Q +WL + L + G    E +P+FCDN SAI+++KN V H  TKHIDI
Sbjct: 1380 ESEYVAAASCCSQILWLLSTLKDYGL-TFEKVPLFCDNTSAINIAKNPVQHSRTKHIDI 1437


>gb|ABA98230.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1463

 Score =  134 bits (337), Expect = 1e-29
 Identities = 66/119 (55%), Positives = 81/119 (68%)
 Frame = +2

Query: 2    LDLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTA 181
            L+ GIWY     I L G+SDAD+ G   DRKSTSG C  LG +LI WSS KQ  +A STA
Sbjct: 1292 LEFGIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSIAQSTA 1351

Query: 182  ESEYIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            ESEY+AA+ C +Q +WL + L + G    E IP+FCDN SAI+++KN V H  TKHIDI
Sbjct: 1352 ESEYVAAASCCSQILWLLSTLKDYGL-TFEKIPLFCDNTSAINIAKNPVQHSRTKHIDI 1409


>gb|ABF95221.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2111

 Score =  134 bits (337), Expect = 1e-29
 Identities = 59/118 (50%), Positives = 85/118 (72%)
 Frame = +2

Query: 5    DLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAE 184
            +LG+WY +G G  L+G+SD+D+AG   DRKST+G C  LG +L++WSS KQ  +ALSTAE
Sbjct: 1397 NLGLWYPKGCGFELLGYSDSDYAGCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTAE 1456

Query: 185  SEYIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            +EY+AA  C  Q +W++  L + G++  + IP+ CDN+SAI ++ N + H  TKHIDI
Sbjct: 1457 AEYVAAGSCCAQLLWMRQTLKDFGYNFTK-IPLLCDNESAIKIANNPIQHSRTKHIDI 1513


>gb|AAM01150.2|AC113336_2 Putative retroelement [Oryza sativa Japonica Group]
            gi|22711567|gb|AAM08852.2|AC113337_16 Putative
            retroelement [Oryza sativa Japonica Group]
          Length = 1813

 Score =  134 bits (337), Expect = 1e-29
 Identities = 66/119 (55%), Positives = 81/119 (68%)
 Frame = +2

Query: 2    LDLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTA 181
            L+ GIWY     I L G+SDAD+ G   DRKSTSG C  LG +LI WSS KQ  VA STA
Sbjct: 1680 LEFGIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTA 1739

Query: 182  ESEYIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            ESEY+AA+ C +Q +WL + L + G    E +P+FCDN SAI+++KN V H  TKHIDI
Sbjct: 1740 ESEYVAAASCCSQILWLLSTLKDYGL-TFEKVPLFCDNTSAINIAKNPVQHSRTKHIDI 1797


>gb|AAC49502.1| Pol [Zea mays]
          Length = 1068

 Score =  134 bits (337), Expect = 1e-29
 Identities = 60/116 (51%), Positives = 85/116 (73%)
 Frame = +2

Query: 11   GIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAESE 190
            G+WY +G   +L+G+SD+D+AG   DRKSTSG C  LG +L++W+S KQ  VALSTAE+E
Sbjct: 900  GLWYPKGSTFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAE 959

Query: 191  YIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            Y+AA QC  Q +W++  L + G++ +  +P+ CDN+SAI M++N V H  TKHIDI
Sbjct: 960  YVAAGQCCAQLLWMRQTLRDFGYN-LSKVPLLCDNESAIRMAENPVEHSRTKHIDI 1014


>emb|CCI55376.1| PH01B035L11.21 [Phyllostachys edulis]
          Length = 2029

 Score =  134 bits (336), Expect = 2e-29
 Identities = 63/119 (52%), Positives = 85/119 (71%)
 Frame = +2

Query: 2    LDLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTA 181
            +D GIWY     ++L  FSDAD+AG   DRKSTSG C  LG +L++WSS KQ  VA STA
Sbjct: 1810 IDYGIWYSSSSCLSLRAFSDADFAGCRIDRKSTSGTCQFLGTSLVSWSSRKQSGVAQSTA 1869

Query: 182  ESEYIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            E+EY+AA+ C +Q +W+ + L + G  +I+ +P+FCDN SAI+++KN V H  TKHIDI
Sbjct: 1870 EAEYVAAASCCSQVLWMTSTLRDFGL-VIDSVPLFCDNTSAINIAKNPVQHSRTKHIDI 1927


>emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera]
          Length = 334

 Score =  134 bits (336), Expect = 2e-29
 Identities = 67/121 (55%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
 Frame = +2

Query: 2   LDLGIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTA 181
           +++G+WY +G    LIGFSDAD+AG   +RKSTSG C  LG +L++W S KQ  VALSTA
Sbjct: 167 MNIGLWYPKGDNFELIGFSDADFAGCRVERKSTSGTCHFLGHSLVSWHSKKQNSVALSTA 226

Query: 182 ESEYIAASQCTTQAVWLKN*LA--NLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHID 355
           E+EYIAA  C  Q +W+K  L+  NL F   E +PI CDN SAI++SKN V H  TKHI+
Sbjct: 227 EAEYIAAGLCCAQILWMKQTLSDFNLSF---EHVPIKCDNTSAINISKNPVQHSRTKHIE 283

Query: 356 I 358
           I
Sbjct: 284 I 284


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  133 bits (334), Expect = 3e-29
 Identities = 62/116 (53%), Positives = 82/116 (70%)
 Frame = +2

Query: 11   GIWYGRGKGINLIGFSDADWAGDHNDRKSTSGQCFMLGENLITWSSHKQECVALSTAESE 190
            G+WY RG   +LIG+SDADWAG   +RKSTSG C  LG +L++W+S KQ  VALSTAE+E
Sbjct: 894  GLWYPRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAE 953

Query: 191  YIAASQCTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKHTKHIDI 358
            YIAA  C  Q +W++  L + G+ + + +P+ CDN+SAI M+ N V H  TKHI I
Sbjct: 954  YIAAGHCCAQLLWMRQTLLDYGYKLTK-VPLLCDNESAIKMADNPVEHSRTKHIAI 1008


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