BLASTX nr result
ID: Ephedra28_contig00001591
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00001591
(1140 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth... 323 8e-86
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth... 321 4e-85
ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synth... 316 1e-83
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth... 310 5e-82
gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus... 306 1e-80
ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [S... 305 3e-80
gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japo... 303 7e-80
ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group] g... 303 7e-80
ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synth... 303 1e-79
ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synth... 301 2e-79
gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| T... 301 2e-79
ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synth... 301 3e-79
ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Popu... 299 1e-78
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth... 298 2e-78
ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synth... 298 3e-78
gb|AER92594.1| putative pseudouridine synthase family protein [L... 298 3e-78
gb|EMS58771.1| Putative tRNA pseudouridine synthase [Triticum ur... 297 6e-78
gb|EMT32485.1| Putative tRNA pseudouridine synthase [Aegilops ta... 296 1e-77
gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus... 295 2e-77
ref|XP_006294040.1| hypothetical protein CARUB_v10023036mg [Caps... 293 7e-77
>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Solanum tuberosum]
Length = 487
Score = 323 bits (828), Expect = 8e-86
Identities = 173/370 (46%), Positives = 234/370 (63%), Gaps = 15/370 (4%)
Frame = +2
Query: 2 PEFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVW 139
P K+KV M VGY+G IEGELE AIFKAGG+ D+N NL K W
Sbjct: 46 PFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRDSNFGNLYKIGW 105
Query: 140 SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
+RS+RTDKGVHSLAT+I++K+EIP DAW D +G+ LA+ +N LP NIRVFS+LP +
Sbjct: 106 ARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGIALANCVNSSLPENIRVFSILPSKKR 165
Query: 320 FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
F A+++C +RKY+YL+PAE+IGI +S EIE IA F DIL+SFEG HPFHNYT+R+K
Sbjct: 166 FDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGEHPFHNYTIRSK 225
Query: 500 NRKSKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPG-IRVLEDDAIDEDYXX 676
RK + +S + + +I +E +E G + ++E + + +
Sbjct: 226 YRKQSPARNLLKNESLLKKGRPSSEKEISGSEESDGEQNGKEKGVVTIVEAENQNPEGNC 285
Query: 677 XXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQ 856
+ N V P+QARWLHEPD DKLS+AHFRRI C L+ +
Sbjct: 286 NEKVSHSKDL--------NSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGM 337
Query: 857 RYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILH 1036
Y+E+ + GESFM HQIRKM+GT+VA+ R +LP DI+++SL +FSRIVLP+APSEVL+L
Sbjct: 338 NYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLK 397
Query: 1037 SSQFSFTHDP 1066
+ F+ + P
Sbjct: 398 GNNFALRNHP 407
>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
lycopersicum]
Length = 496
Score = 321 bits (822), Expect = 4e-85
Identities = 171/370 (46%), Positives = 233/370 (62%), Gaps = 15/370 (4%)
Frame = +2
Query: 2 PEFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVW 139
P K+KV M VGY+G IEGELE AIFKAGG+ ++N NL K W
Sbjct: 42 PFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLYKIGW 101
Query: 140 SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
+RS+RTDKGVHSLAT+I++K+EIP DAW D +G+ LA+ +N LP NIRVFS+LP +
Sbjct: 102 ARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCVNSSLPENIRVFSILPSKKR 161
Query: 320 FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
F A+++C +RKY+YL+PAE+IGI +S EIE IA F DIL+SFEG HPFHNYT+R+K
Sbjct: 162 FDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIANFNDILNSFEGEHPFHNYTIRSK 221
Query: 500 NRKSKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPG-IRVLEDDAIDEDYXX 676
RK + S + + +I +E+ +E G + ++E + + +
Sbjct: 222 YRKQSPARNLLKNDSLLKKGRPSSEEEISGSEEIDGEQNRKEQGVVTIVEAENQNAEGNC 281
Query: 677 XXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQ 856
+ N V P+QARWLHEPD DKLS+AHFRRI C L+ +
Sbjct: 282 NLKVSHSKDL--------NSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGM 333
Query: 857 RYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILH 1036
Y+E+ + GESFM HQIRKM+GT+VA+ R +LP D +++SL +FSRIVLP+APSEVL+L
Sbjct: 334 NYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDTLRMSLCKFSRIVLPLAPSEVLVLK 393
Query: 1037 SSQFSFTHDP 1066
+ F+ + P
Sbjct: 394 GNNFALRNHP 403
>ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X2
[Solanum tuberosum]
Length = 423
Score = 316 bits (810), Expect = 1e-83
Identities = 167/350 (47%), Positives = 227/350 (64%), Gaps = 1/350 (0%)
Frame = +2
Query: 20 VAMMVGYIGHRAIEGELESAIFKAGGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAMK 199
V V + AIEGELE AIFKAGG+ D+N NL K W+RS+RTDKGVHSLAT+I++K
Sbjct: 2 VLFWVWILNFFAIEGELEKAIFKAGGIRDSNFGNLYKIGWARSSRTDKGVHSLATMISLK 61
Query: 200 LEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHAKKDCISRKYTYLLPAEV 379
+EIP DAW D +G+ LA+ +N LP NIRVFS+LP + F A+++C +RKY+YL+PAE+
Sbjct: 62 MEIPADAWEDDPNGIALANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIPAEI 121
Query: 380 IGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRKSKLNTLFSRLKSHAAEA 559
IGI +S EIE IA F DIL+SFEG HPFHNYT+R+K RK + +S +
Sbjct: 122 IGIKNDSTSSEIEYHIANFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNESLLKKG 181
Query: 560 SHNETSKIKDDDELVEIDETREPG-IRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENI 736
+ +I +E +E G + ++E + + + + N
Sbjct: 182 RPSSEKEISGSEESDGEQNGKEKGVVTIVEAENQNPEGNCNEKVSHSKDL--------NS 233
Query: 737 VPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKM 916
V P+QARWLHEPD DKLS+AHFRRI C L+ + Y+E+ + GESFM HQIRKM
Sbjct: 234 VIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIRKM 293
Query: 917 IGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHSSQFSFTHDP 1066
+GT+VA+ R +LP DI+++SL +FSRIVLP+APSEVL+L + F+ + P
Sbjct: 294 VGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHP 343
>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis vinifera]
Length = 564
Score = 310 bits (795), Expect = 5e-82
Identities = 179/388 (46%), Positives = 240/388 (61%), Gaps = 31/388 (7%)
Frame = +2
Query: 11 KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
K+KV M VGY+G IEGELE+A+FKAGG+ D+N NL K W RS
Sbjct: 62 KKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRS 121
Query: 149 NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
+RTDKGVHSLAT+I++K+EIP +AW+ D +G+ LA+ +N HLP NI+VFS+LP + F A
Sbjct: 122 SRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDA 181
Query: 329 KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
+++C R+Y+YLLPAE+IGI NS EI++ IA+F DIL++FEG HPF NYT+R+K RK
Sbjct: 182 RRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRK 241
Query: 509 S-------KLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDED 667
+F R KS + EAS +E ++ D +E GI + D D
Sbjct: 242 QFPAKQSPGNGGVFRRAKS-SGEASTSE-FEVSDGEE--------NSGINGVISS--DYD 289
Query: 668 YXXXXXXXXXXXIIPTTVGSEN--------IVPPL--QARWLHEPDMHDKLSAAHFRRIL 817
+ VGS N P L +ARWLH PD D++SA+HFR+I
Sbjct: 290 EGENQNSSESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIF 349
Query: 818 SFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRI 997
+ +C L+ Y+EL + GESFM HQIRKM+GT++AV R +LP DI+ LSL++FSRI
Sbjct: 350 NCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRI 409
Query: 998 VLPVAPSEVLILHSSQFSFTHDPWRDER 1081
VLP+APSEVLIL + FS P +R
Sbjct: 410 VLPLAPSEVLILRGNSFSVRKKPGNVKR 437
>gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus vulgaris]
Length = 507
Score = 306 bits (783), Expect = 1e-80
Identities = 169/369 (45%), Positives = 227/369 (61%), Gaps = 14/369 (3%)
Frame = +2
Query: 2 PEFKRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVW 139
P K+KV M V Y+G IE ELE+A+FKAGG+ ++N +L K W
Sbjct: 56 PSRKKKVVMRVAYVGTNYRGLQMQHDEHFLSTIEKELETAVFKAGGIRESNFGDLQKIKW 115
Query: 140 SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
+RS+RTDKGVHSLATI++ K+EIP +AW D G LA+ +N +LP++I+V S+LP +
Sbjct: 116 ARSSRTDKGVHSLATIVSFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVLSILPSQRS 175
Query: 320 FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
F +K+C RKY+YLLPAE+IGI +S +EI+ I++F DIL+ FEG HPFHNYT RAK
Sbjct: 176 FDPRKECAWRKYSYLLPAEIIGIQSDSSNDEIDYHISEFHDILNVFEGEHPFHNYTARAK 235
Query: 500 NRKSKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDYXXX 679
RK N S KS + + D++E EIDE I E +
Sbjct: 236 YRKHFPNKQLSS-KSVERLPPYESECEYSDEEENFEIDEAFTENIE-CRSQKCSETHNFG 293
Query: 680 XXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQR 859
+ ++ +ARWL+EPD D+LSA+HFR++ +C L++
Sbjct: 294 KPVVGSSNKNGNRLPGQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGYN 353
Query: 860 YIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHS 1039
YIE+ + GESFM HQIRKM+GT+VAV R VLP DIIKLSL+RFSRI+LP+APSEVLIL
Sbjct: 354 YIEISIQGESFMLHQIRKMVGTAVAVKRKVLPKDIIKLSLARFSRIILPLAPSEVLILRG 413
Query: 1040 SQFSFTHDP 1066
++FS P
Sbjct: 414 NRFSIRTRP 422
>ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [Sorghum bicolor]
gi|241921746|gb|EER94890.1| hypothetical protein
SORBIDRAFT_01g035980 [Sorghum bicolor]
Length = 520
Score = 305 bits (780), Expect = 3e-80
Identities = 168/366 (45%), Positives = 230/366 (62%), Gaps = 20/366 (5%)
Frame = +2
Query: 11 KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
K++V + +GYIG IE LESAIFK+GG+L++N L K W RS
Sbjct: 76 KKRVVLRIGYIGTEYRGLQKQRELGVDSTIESVLESAIFKSGGILESNYGKLQKVGWERS 135
Query: 149 NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
+RTDKGVHSLAT+I++K+EIP AW D DG+ LA +N +LP N+RVFS+LP + F
Sbjct: 136 SRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPAQRSFDV 195
Query: 329 KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
+++C+ R+Y YLLPAEVIGI + PEEI+ +++F IL FEG HPFHNYT RAK RK
Sbjct: 196 RRECLYREYFYLLPAEVIGIKDGYSPEEIQEHLSEFNSILKGFEGNHPFHNYTARAKYRK 255
Query: 509 ------SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDY 670
+ LKS ++E E+S + E D+ + I ++ A + +
Sbjct: 256 VLAGRHPRAKGASLTLKSMSSEMGMAESSSL----ESTSSDDDEDLNISSIDSGASENIF 311
Query: 671 XXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIK 850
SE+ V +QARWLHEPD D+L+A+HFR I++ +C +LQ+
Sbjct: 312 VNDILKF-----------SESRVQ-IQARWLHEPDESDRLNASHFRDIITCSCGELQTSS 359
Query: 851 NQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLI 1030
+++EL + G SFM HQIRKM+GT+VAV RG+LP DII+LSL++FSRIVLP+APSEVLI
Sbjct: 360 GIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLI 419
Query: 1031 LHSSQF 1048
L + F
Sbjct: 420 LKDNSF 425
>gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japonica Group]
Length = 516
Score = 303 bits (777), Expect = 7e-80
Identities = 167/366 (45%), Positives = 227/366 (62%), Gaps = 20/366 (5%)
Frame = +2
Query: 11 KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
K++V + VGY+G IE LE+AIFKAGG+L++N L K W RS
Sbjct: 71 KKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQKVGWERS 130
Query: 149 NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
+RTDKGVHSLAT+I++K+EIP AW D DG+ L++ +N +LP N+RVFSVLP + F
Sbjct: 131 SRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPAQRSFDV 190
Query: 329 KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
+++C+ R+Y YLLPAE+IGI EE+ +++F IL FEG HPFHNYT RAK RK
Sbjct: 191 RRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTARAKYRK 250
Query: 509 ------SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDY 670
K+ S + S E S +++S DD + DE ++ ++ Y
Sbjct: 251 VLAGRHRKVKGASSAVNSMPTEMSLDQSS--SDDGTTSDHDEEDLNSSSIIGSSVPEDSY 308
Query: 671 XXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIK 850
SE V ++ARWLHEPD +D+L+A+HFR IL+F+C +LQ
Sbjct: 309 KDNPEF------------SEKQV-QIRARWLHEPDENDRLNASHFRDILTFSCGELQISS 355
Query: 851 NQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLI 1030
+++EL + G SFM HQIRKM+GTSVAV RG+LP DII LSL++FSRIVLP+APSEVL+
Sbjct: 356 GIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLV 415
Query: 1031 LHSSQF 1048
L + F
Sbjct: 416 LRDNSF 421
>ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group]
gi|108708043|gb|ABF95838.1| tRNA pseudouridine synthase
family protein, expressed [Oryza sativa Japonica Group]
gi|113548527|dbj|BAF11970.1| Os03g0338600 [Oryza sativa
Japonica Group]
Length = 516
Score = 303 bits (777), Expect = 7e-80
Identities = 167/366 (45%), Positives = 227/366 (62%), Gaps = 20/366 (5%)
Frame = +2
Query: 11 KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
K++V + VGY+G IE LE+AIFKAGG+L++N L K W RS
Sbjct: 71 KKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQKVGWERS 130
Query: 149 NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
+RTDKGVHSLAT+I++K+EIP AW D DG+ L++ +N +LP N+RVFSVLP + F
Sbjct: 131 SRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPAQRSFDV 190
Query: 329 KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
+++C+ R+Y YLLPAE+IGI EE+ +++F IL FEG HPFHNYT RAK RK
Sbjct: 191 RRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTARAKYRK 250
Query: 509 ------SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDY 670
K+ S + S E S +++S DD + DE ++ ++ Y
Sbjct: 251 VLAGRHRKVKGASSAVNSMPTEMSLDQSS--SDDGTTSDHDEEDLNSSSIIGSSVPEDSY 308
Query: 671 XXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIK 850
SE V ++ARWLHEPD +D+L+A+HFR IL+F+C +LQ
Sbjct: 309 KDNPEF------------SEKQV-QIRARWLHEPDENDRLNASHFRDILTFSCGELQISS 355
Query: 851 NQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLI 1030
+++EL + G SFM HQIRKM+GTSVAV RG+LP DII LSL++FSRIVLP+APSEVL+
Sbjct: 356 GIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLV 415
Query: 1031 LHSSQF 1048
L + F
Sbjct: 416 LRDNSF 421
>ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synthase-like [Setaria
italica]
Length = 519
Score = 303 bits (775), Expect = 1e-79
Identities = 167/370 (45%), Positives = 231/370 (62%), Gaps = 24/370 (6%)
Frame = +2
Query: 11 KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
K++V + VGY+G IE LESAIFKAGG+L++N L K W RS
Sbjct: 75 KKRVVLRVGYVGTEYRGLQKQRELSVDSTIESVLESAIFKAGGILESNYGKLQKVGWERS 134
Query: 149 NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
+RTDKGVHSLAT+I++K+EIP AW D DG+ LA +N +LP N+RVFS+LP + F
Sbjct: 135 SRTDKGVHSLATMISLKMEIPDRAWENDPDGISLASFINSNLPNNVRVFSILPAQRSFDV 194
Query: 329 KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
+++C+ R+Y YLLPAE IGI + EE++ +++F IL FEG HPFHNYT RAK RK
Sbjct: 195 RRECLYREYFYLLPAETIGIKDGCSSEEVQEHLSEFNSILKGFEGNHPFHNYTARAKYRK 254
Query: 509 ------SKLNTLFSRLKSHAAEASHNETSK----IKDDDELVEIDETREPGIRVLEDDAI 658
++ LKS ++E E S D DE + I + G+ ED+ +
Sbjct: 255 VLAGSHRRVKGACLPLKSMSSETGMEENSSEDNTPSDHDEDLNISSMIDSGV---EDNCL 311
Query: 659 DEDYXXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDL 838
++ + G++ +QARWL+EPD D+L+A+HFR I++ +C +L
Sbjct: 312 ND--------------VAKHFGNQ---VQIQARWLYEPDESDRLNASHFRDIITCSCGEL 354
Query: 839 QSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPS 1018
QS +++EL + G SFM HQIRKM+GT+VAV RG+LP DII+LSL++FSRIVLP+APS
Sbjct: 355 QSSSGIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPS 414
Query: 1019 EVLILHSSQF 1048
EVLIL + F
Sbjct: 415 EVLILRDNSF 424
>ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synthase-like [Brachypodium
distachyon]
Length = 522
Score = 301 bits (772), Expect = 2e-79
Identities = 170/374 (45%), Positives = 230/374 (61%), Gaps = 28/374 (7%)
Frame = +2
Query: 11 KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
K++V + VGY+G IE LESAIFKAGG+L++N L K W RS
Sbjct: 76 KKRVVLRVGYVGSEYRGLQKQRELSADSTIESVLESAIFKAGGILESNYGKLQKVGWERS 135
Query: 149 NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
+RTDKGVHSLAT+I++K+EIP AW D DG+ LA+ +N +LP NI+VFS+LP + F
Sbjct: 136 SRTDKGVHSLATMISLKMEIPDRAWENDPDGIALANFINSNLPNNIKVFSILPAQRSFDV 195
Query: 329 KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
+++C+ R+Y YLLPAE+IGI EE+E + +F IL FEG HPFHNYT RAK RK
Sbjct: 196 RRECLYREYFYLLPAEIIGIKSGCSSEEVEEHLIEFNSILKGFEGNHPFHNYTARAKYRK 255
Query: 509 -------------SKLNTLFSRLKSHAAEASHNETSKIKD-DDELVEIDETREPGIRVLE 646
S +N++ S L A + S N+ D DDE + V++
Sbjct: 256 VLAGAHRRSKETSSTINSIPSEL---AVDQSPNDDGATSDADDEHLNFSS-------VVD 305
Query: 647 DDAIDEDYXXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFT 826
+ D+ EN V +QARWLHEP+ +D+LSA+HFR I++ +
Sbjct: 306 SSLPENDWNKDNPKHH-----------ENHVQ-IQARWLHEPNENDRLSASHFRDIITCS 353
Query: 827 CSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLP 1006
C +LQS +++EL + G SFM HQIRKM+GT+VAV RG+LP +II+LSL++FSRIVLP
Sbjct: 354 CGELQSSSGIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKEIIELSLAKFSRIVLP 413
Query: 1007 VAPSEVLILHSSQF 1048
+APSEVLIL + F
Sbjct: 414 IAPSEVLILRDNSF 427
>gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| TPA: hypothetical
protein ZEAMMB73_241728 [Zea mays]
Length = 516
Score = 301 bits (772), Expect = 2e-79
Identities = 165/366 (45%), Positives = 229/366 (62%), Gaps = 20/366 (5%)
Frame = +2
Query: 11 KRKVAMMVGYIG--------------HRAIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
K++V + +GY+G IE LESAIFK+GG+L++N L K W RS
Sbjct: 76 KKRVVLRIGYVGTDYRGLQKQQELGVDSTIESVLESAIFKSGGILESNYGKLQKIGWERS 135
Query: 149 NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
+RTDKGVHSLAT+I++K+EIP AW D DG+ LA +N +LP N+RVFS+LP + F
Sbjct: 136 SRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPAQRSFDV 195
Query: 329 KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
+++C+ R+Y YLLPAE+IGI ++ EE++ +++F IL FEG HPFHNYT RAK RK
Sbjct: 196 RRECLYREYFYLLPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEGNHPFHNYTARAKYRK 255
Query: 509 ------SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDY 670
+ S LKS +++ E+S +E D + I + D I ED
Sbjct: 256 VLAGRHRRAKGASSALKSMSSDTGMAESS----SEESTSPDHDEDLNISSIFDSGIPEDT 311
Query: 671 XXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIK 850
SE+ + +QARWLHEPD D+L+A+HFR I++ +C DLQ+
Sbjct: 312 RVNGILKL----------SEDRL-QIQARWLHEPDESDRLNASHFRDIITCSCGDLQTSS 360
Query: 851 NQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLI 1030
+++EL + G SFM HQIRKM+GT+V V RG+LP DII+LSL++FSRIVLP+APSEVL+
Sbjct: 361 GIQFVELTICGVSFMLHQIRKMVGTAVTVKRGLLPRDIIELSLAKFSRIVLPIAPSEVLV 420
Query: 1031 LHSSQF 1048
L + F
Sbjct: 421 LKDNSF 426
>ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Glycine max] gi|571441413|ref|XP_006575436.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X2
[Glycine max] gi|571441415|ref|XP_006575437.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X3
[Glycine max] gi|571441417|ref|XP_006575438.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X4
[Glycine max]
Length = 493
Score = 301 bits (771), Expect = 3e-79
Identities = 168/371 (45%), Positives = 229/371 (61%), Gaps = 16/371 (4%)
Frame = +2
Query: 2 PEFKRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVW 139
P K+KVAM+V Y+G IE ELE+AIFKAGG+ ++N +L K W
Sbjct: 41 PSRKKKVAMLVAYVGTNYRGLQMQHDEHSLSTIEKELETAIFKAGGIRESNFGDLQKIGW 100
Query: 140 SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
+RS+RTDKGVHSLATII+ K+EIP +AW D G LA+ +N +LP++I+V S+LP +
Sbjct: 101 ARSSRTDKGVHSLATIISFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVISILPSQRS 160
Query: 320 FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
F +K+CI RKY+YLLPAE+IGI ++ +E++ I++F DIL+ FEG HPFHNYT R+K
Sbjct: 161 FDPRKECILRKYSYLLPAEIIGI-QSHFSDEVDYHISEFNDILNVFEGIHPFHNYTARSK 219
Query: 500 NRKSKLNTLFSRLKSHAA--EASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDYX 673
RK N S +A S+ + D +E E DE I V + E +
Sbjct: 220 YRKQFPNRQSSSKSGTSARESLSYESECEYSDGEENSETDEAYTENI-VCQSQKFSETHH 278
Query: 674 XXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKN 853
+ ++ +ARWL+EPD D+LSA+HFR++ +C L++
Sbjct: 279 FAEPVVGSSNKNGNGLHDQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLG 338
Query: 854 QRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLIL 1033
YIE+ + GESFM HQIRKM+GT+VAV R LP DIIKLSL+RFSRI+LP+APSE LIL
Sbjct: 339 YNYIEISIQGESFMLHQIRKMVGTAVAVKRKALPKDIIKLSLTRFSRIILPLAPSEALIL 398
Query: 1034 HSSQFSFTHDP 1066
++FS P
Sbjct: 399 RGNRFSIRTRP 409
>ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Populus trichocarpa]
gi|550325882|gb|EEE95884.2| hypothetical protein
POPTR_0013s15030g [Populus trichocarpa]
Length = 505
Score = 299 bits (766), Expect = 1e-78
Identities = 168/364 (46%), Positives = 231/364 (63%), Gaps = 17/364 (4%)
Frame = +2
Query: 11 KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
K+KVA+ VGY+G IEGELE AI++AGG+ ++N NL+K W+RS
Sbjct: 75 KKKVALRVGYVGTDYRGLQKQHDQHSLLTIEGELERAIYEAGGIRESNYGNLNKISWARS 134
Query: 149 NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
+RTDKGVHSLAT I MK+EIP +AW+ DL G+VLA +N +LP +IRV S+LP + F
Sbjct: 135 SRTDKGVHSLATTITMKMEIPENAWKDDLYGMVLAKHVNSYLPDSIRVLSILPAQKSFDP 194
Query: 329 KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
+++C RKY+YLLPAEVIGI + EI++ I+ F +IL++FEG HPFHNYTVR+K R+
Sbjct: 195 RRECDIRKYSYLLPAEVIGIKSHFSMAEIDDHISDFNNILNAFEGDHPFHNYTVRSKYRR 254
Query: 509 SKLNTLFSRLKSHAAEASHNE--TSKIKDDDELVEIDE-TREPGIRVLEDDAIDEDYXXX 679
+ H ++ + + TS ++ VE+ + + E I L D + +
Sbjct: 255 K-----YPTKNGHVSKRARSSWGTSASGSEENHVELSQNSLESSICDLNGDILKDQ---- 305
Query: 680 XXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQR 859
S N+ PL+ARWLHEPD D++ AAHFR+I +C L+
Sbjct: 306 ---------------SSNL--PLRARWLHEPDETDRIGAAHFRKIFRCSCGKLEKSLGFD 348
Query: 860 YIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHS 1039
++E+ + GESFM HQIRKM+GT+VAV R VLP D+I LSL++FSRIVLP+APSEVLIL
Sbjct: 349 FVEISIWGESFMLHQIRKMVGTAVAVKRKVLPRDLIMLSLTKFSRIVLPLAPSEVLILRG 408
Query: 1040 SQFS 1051
+ FS
Sbjct: 409 NDFS 412
>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
[Citrus sinensis]
Length = 539
Score = 298 bits (764), Expect = 2e-78
Identities = 170/384 (44%), Positives = 233/384 (60%), Gaps = 29/384 (7%)
Frame = +2
Query: 2 PEFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVW 139
P K+KVA+ VGY+G IEGELE+A+FKAGG+ ++N NL K W
Sbjct: 74 PVRKKKVALRVGYVGTDYRGLQMQRDEHSLSTIEGELETAVFKAGGIRESNYGNLQKIAW 133
Query: 140 SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
+RS+RTDKGVHSLAT+I +K+EIP DAW+ D G+ LA ++N HLP NI+VFS+LP +
Sbjct: 134 ARSSRTDKGVHSLATMICLKMEIPPDAWKDDPYGIDLAKRVNAHLPRNIKVFSILPSQRS 193
Query: 320 FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
F +++C RKY+YLLPAEVIGI+ EI++ I+ F IL+ FEG HPFHNYT R+K
Sbjct: 194 FDPRRECNLRKYSYLLPAEVIGINSQLTAAEIDSHISDFNAILNEFEGEHPFHNYTERSK 253
Query: 500 NR-------------KSKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRV 640
R K+ + +FSR++ +E + SK+++ D +E G +
Sbjct: 254 YRRKPHKTGCVSKRAKASKDAVFSRVEE--SEGEEDGFSKVEESDG----EEDLGIGGEI 307
Query: 641 LEDD--AIDEDYXXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRI 814
DD A + +N ++ARWL+E D DKLSA+HFR+I
Sbjct: 308 SSDDEKANQNSMVSGVHQEDCCNQHANGLKDQNSSSVIRARWLYETDEADKLSASHFRKI 367
Query: 815 LSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSR 994
S +C L+ Y+E+ + GESFM HQIRKM+GT+VAV R +LP DI+ LSL++ SR
Sbjct: 368 FSCSCGKLEKSLGFGYVEISISGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKHSR 427
Query: 995 IVLPVAPSEVLILHSSQFSFTHDP 1066
IVLP+APSEVL L ++ FS P
Sbjct: 428 IVLPLAPSEVLFLRANSFSVRTRP 451
>ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synthase-like [Oryza
brachyantha]
Length = 518
Score = 298 bits (763), Expect = 3e-78
Identities = 163/366 (44%), Positives = 223/366 (60%), Gaps = 20/366 (5%)
Frame = +2
Query: 11 KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
K++V + VGY+G IE LE+AIFK GG+L++N L K W RS
Sbjct: 73 KKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKTGGILESNYGKLQKVGWERS 132
Query: 149 NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
+RTDKGVHSLAT+I++K+EIP AW D DG+ L++ +N +LP N+RVFS+LP + F
Sbjct: 133 SRTDKGVHSLATMISLKMEIPDRAWENDPDGISLSNFINSNLPDNVRVFSILPAQRSFDV 192
Query: 329 KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
+K+C+ R Y YL+PAE+IGI + +E+ +++F IL FEG HPFHNYT RAK RK
Sbjct: 193 RKECLYRDYLYLIPAEIIGIKDGCSSDEVVEHLSEFNYILKGFEGNHPFHNYTARAKYRK 252
Query: 509 SKLNTLFSRLKSHAAEASHNETSKI------KDDDELVEIDETREPGIRVLEDDAIDEDY 670
R A+ A ++ +SK+ DD + DE ++ A + Y
Sbjct: 253 VLAGR--HRKVKRASSAVNSMSSKMGMEGISSDDGTSSDHDEEDLNSSSLIGSSAPENSY 310
Query: 671 XXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIK 850
I +ARWLHEPD +D+L+A+HFR IL+F+C +LQS
Sbjct: 311 KDSPELSKKQVQI-------------RARWLHEPDENDRLNASHFRDILTFSCGELQSSS 357
Query: 851 NQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLI 1030
+++EL + G SFM HQIRKM+GT+VAV RG+LP DII LSL++FSRIVLP+APSEVLI
Sbjct: 358 GMQFVELTISGVSFMLHQIRKMVGTAVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLI 417
Query: 1031 LHSSQF 1048
L + F
Sbjct: 418 LRDNSF 423
>gb|AER92594.1| putative pseudouridine synthase family protein [Linum usitatissimum]
Length = 565
Score = 298 bits (763), Expect = 3e-78
Identities = 164/374 (43%), Positives = 227/374 (60%), Gaps = 22/374 (5%)
Frame = +2
Query: 2 PEFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVW 139
P K+KV + VGY+G +E ELE+AIFKAGG+L++N +L+K W
Sbjct: 111 PIRKKKVVLRVGYVGTDYRGLQKQHDEHSLSTVEAELENAIFKAGGILESNYGHLNKVAW 170
Query: 140 SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
+RS+RTDKGVHSLAT I MK+EIP AW+ D G+ LA +N +LP +IR+FS+LP +
Sbjct: 171 ARSSRTDKGVHSLATTITMKMEIPETAWKDDPYGIALARTVNSYLPDSIRIFSILPAQKN 230
Query: 320 FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
F + +C RKY+YLLPAE+IGI +S +EI I+ FR IL++FEG HPFHNYT+R+K
Sbjct: 231 FDPRLECNMRKYSYLLPAEIIGIRSHSDADEISEHISDFRKILNAFEGDHPFHNYTIRSK 290
Query: 500 NRKSKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDYXXX 679
R F H + K D ++I + G E++ +DE
Sbjct: 291 YRSQIRRNTFPEKNYHFS----------KRDRAFIQIGDPVSEGSD--EEEGVDE----- 333
Query: 680 XXXXXXXXIIPTTVGSENIVP--------PLQARWLHEPDMHDKLSAAHFRRILSFTCSD 835
I+ ++NI P L ARWL EPD D++ A+HFR+I+ +C +
Sbjct: 334 --------IVQLDNSNQNIEPVKDHQSSGQLVARWLXEPDERDRIGASHFRKIIRCSCGE 385
Query: 836 LQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAP 1015
L+ ++E+ + GESFM HQIRKM+GT+VAV R +LP DI+ LSL++FSRIVLP+AP
Sbjct: 386 LEKSSGYNFVEISIWGESFMLHQIRKMVGTAVAVKRDLLPRDILTLSLAKFSRIVLPLAP 445
Query: 1016 SEVLILHSSQFSFT 1057
SEVLIL + +S T
Sbjct: 446 SEVLILRGNSYSLT 459
>gb|EMS58771.1| Putative tRNA pseudouridine synthase [Triticum urartu]
Length = 450
Score = 297 bits (760), Expect = 6e-78
Identities = 162/349 (46%), Positives = 221/349 (63%), Gaps = 5/349 (1%)
Frame = +2
Query: 17 KVAMMVGYIGHRAIEGELESAIFKAGGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAM 196
+V M G IE LESAIFKAGG+L++N L K W RS+RTDKGVHSLAT+I++
Sbjct: 20 EVYNMNAIYGCTTIESVLESAIFKAGGILESNYGKLQKVGWERSSRTDKGVHSLATMISL 79
Query: 197 KLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHAKKDCISRKYTYLLPAE 376
K+EIP AW +D DG+ LA+ +N +LP NI+VFS+LP + F +++C+ R+Y YLLPAE
Sbjct: 80 KMEIPDRAWEKDPDGIALANFINSNLPDNIKVFSILPAQRSFDVRRECLYREYFYLLPAE 139
Query: 377 VIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRKSKLNTLFSRLKSHAAE 556
+IGI + E+E + +F +IL FEG HPFHNYT RAK RK L R K +
Sbjct: 140 IIGIKSSCSSGEVEEHLIEFNNILKCFEGNHPFHNYTARAKYRK-VLAGAHRRAKETSTT 198
Query: 557 ASHNETSKIKD-----DDELVEIDETREPGIRVLEDDAIDEDYXXXXXXXXXXXIIPTTV 721
A + + D D +IDE +L+ A +++ +
Sbjct: 199 AHSIPSEMVADKSTSGDGTTSDIDEEYLNSPSILDSSAPEDNCNMDNPELPESHV----- 253
Query: 722 GSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQRYIELMVHGESFMYH 901
+QARWLHEP+ +D+LSA+HFR IL+ +C +L+S +++EL + G SFM H
Sbjct: 254 -------QIQARWLHEPNDNDRLSASHFRDILTCSCRELRSSSGVQFVELTICGASFMLH 306
Query: 902 QIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHSSQF 1048
QIRKM+GT+VAV RG+LP DII+LSL++FSRIVLP+APSEVLIL + F
Sbjct: 307 QIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLILRDNSF 355
>gb|EMT32485.1| Putative tRNA pseudouridine synthase [Aegilops tauschii]
Length = 429
Score = 296 bits (758), Expect = 1e-77
Identities = 159/337 (47%), Positives = 217/337 (64%), Gaps = 5/337 (1%)
Frame = +2
Query: 53 AIEGELESAIFKAGGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAWRRD 232
AIE LESAIFKAGG+L++N L K W RS+RTDKGVHSLAT+I++K+EIP AW +D
Sbjct: 11 AIESVLESAIFKAGGILESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEKD 70
Query: 233 LDGLVLADKLNVHLPYNIRVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEE 412
DG+ LA+ +N +LP NI+VFS+LP + F +++C+ R+Y YLLPAE+IGI + E
Sbjct: 71 PDGIALANFINSNLPDNIKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSSCSSGE 130
Query: 413 IENCIAKFRDILSSFEGRHPFHNYTVRAKNRKSKLNTLFSRLKSHAAEASHNETSKIKD- 589
+E + +F +IL FEG HPFHNYT RAK RK L R K + A + D
Sbjct: 131 VEEHLIEFNNILKGFEGNHPFHNYTARAKYRK-VLAGAHRRAKETSTTAHSIPFEMVADQ 189
Query: 590 ----DDELVEIDETREPGIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIVPPLQAR 757
D +IDE +L+ A +++ + +QAR
Sbjct: 190 STSGDGTTSDIDEEYLNSPSILDSSAPEDNCKMDNPELPESRV------------QIQAR 237
Query: 758 WLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAV 937
WLHEP+ +D+LSA+HFR IL+ +C +L+S +++EL + G SFM HQIRKM+GT+VAV
Sbjct: 238 WLHEPNDNDRLSASHFRDILTCSCGELRSSSGVQFVELTICGVSFMLHQIRKMVGTAVAV 297
Query: 938 IRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHSSQF 1048
RG+LP DII+LSL++FSR+VLP+APSEVLIL + F
Sbjct: 298 KRGLLPKDIIQLSLAKFSRVVLPIAPSEVLILRDNSF 334
>gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus vulgaris]
Length = 512
Score = 295 bits (756), Expect = 2e-77
Identities = 163/370 (44%), Positives = 229/370 (61%), Gaps = 21/370 (5%)
Frame = +2
Query: 2 PEFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVW 139
P K+KV M VGY+G IE ELE+AIF AGGM D+N +L+K W
Sbjct: 66 PFLKKKVVMRVGYVGTDFRGLQIQRDEHTLSTIEKELETAIFTAGGMRDSNFGDLNKVKW 125
Query: 140 SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
RS+RTDKGVHSLAT+I+ K+EIP +AW+ D G+ LA+++N +LPY IRVFS+LP ++
Sbjct: 126 GRSSRTDKGVHSLATVISFKMEIPENAWKGDDYGIALANRINSYLPYTIRVFSILPSTKR 185
Query: 320 FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
F +++C RKY+YLLPA++IGI + +EI+ I++F IL+ FEG HPFHNYTVR+K
Sbjct: 186 FDPRRECNLRKYSYLLPADIIGIQSHFSKDEIDFHISEFNSILNVFEGEHPFHNYTVRSK 245
Query: 500 NRK-------SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAI 658
RK S + + RL S + + S DD + V+ T L D
Sbjct: 246 YRKKYQVRQSSGSDVMSDRLGSSSLASGFESESDDSDDYDFVDGSPT------TLSDK-- 297
Query: 659 DEDYXXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDL 838
+E + + S+N ++ARWLHEPD D+L+A+HFR + +C L
Sbjct: 298 EESHKPPESSE------SNGLSSQNSNVVVRARWLHEPDEKDRLNASHFRNVFRCSCGKL 351
Query: 839 QSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPS 1018
++ Y+E+ + G+SFM HQIRKM+GT+VAV R ++P D+I +SL++FSRIVLP+AP
Sbjct: 352 ETSMGYDYVEIHIWGDSFMLHQIRKMVGTAVAVKRKLIPKDVISVSLNKFSRIVLPLAPP 411
Query: 1019 EVLILHSSQF 1048
EVLIL + F
Sbjct: 412 EVLILRGNAF 421
>ref|XP_006294040.1| hypothetical protein CARUB_v10023036mg [Capsella rubella]
gi|482562748|gb|EOA26938.1| hypothetical protein
CARUB_v10023036mg [Capsella rubella]
Length = 508
Score = 293 bits (751), Expect = 7e-77
Identities = 165/371 (44%), Positives = 224/371 (60%), Gaps = 17/371 (4%)
Frame = +2
Query: 11 KRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
K+KV + +GY+G + IEGELE AI+KAGG+ D+N +L K W+RS
Sbjct: 63 KKKVVIRIGYVGTDYRGLQIQRDDPAIKTIEGELEVAIYKAGGIRDSNYGDLHKIGWARS 122
Query: 149 NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
+RTDKGVHSLAT I++K+EIP AW+ D G+VLA ++ HLP NIRVFSVLP ++ F
Sbjct: 123 SRTDKGVHSLATSISLKMEIPETAWKDDPQGIVLAKCISKHLPENIRVFSVLPSNRRFDP 182
Query: 329 KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
+++C RKY+YLLP +VIGI N +EI+ I F +IL FEG +PFHNYT R++ R+
Sbjct: 183 RRECTLRKYSYLLPVDVIGIKSNFTSDEIDYHITDFNEILKEFEGEYPFHNYTQRSRYRR 242
Query: 509 ---SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDYXXX 679
KL R +ET +++ +E +E E + D DE +
Sbjct: 243 KSEQKLKQRNGRPPKEPKSVKASETEFAEENHREIEEEEEEEKEV----DGESDEHF--- 295
Query: 680 XXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQR 859
S+N +A+WL+EPD DKLS AHFR++ L+S R
Sbjct: 296 ---------------SDNSQVNTRAKWLYEPDETDKLSGAHFRKVFRCRSGKLESSLGFR 340
Query: 860 YIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHS 1039
++E+ + GESFM HQIRKMIGT+VAV R +LP DII+LSL++F+RIVLP+APSEVLIL
Sbjct: 341 FVEISIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRG 400
Query: 1040 SQFSFTHDPWR 1072
+ F P R
Sbjct: 401 NSFEVRRFPQR 411