BLASTX nr result

ID: Ephedra28_contig00001591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00001591
         (1140 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth...   323   8e-86
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth...   321   4e-85
ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synth...   316   1e-83
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   310   5e-82
gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus...   306   1e-80
ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [S...   305   3e-80
gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japo...   303   7e-80
ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group] g...   303   7e-80
ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synth...   303   1e-79
ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synth...   301   2e-79
gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| T...   301   2e-79
ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synth...   301   3e-79
ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Popu...   299   1e-78
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth...   298   2e-78
ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synth...   298   3e-78
gb|AER92594.1| putative pseudouridine synthase family protein [L...   298   3e-78
gb|EMS58771.1| Putative tRNA pseudouridine synthase [Triticum ur...   297   6e-78
gb|EMT32485.1| Putative tRNA pseudouridine synthase [Aegilops ta...   296   1e-77
gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus...   295   2e-77
ref|XP_006294040.1| hypothetical protein CARUB_v10023036mg [Caps...   293   7e-77

>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
            [Solanum tuberosum]
          Length = 487

 Score =  323 bits (828), Expect = 8e-86
 Identities = 173/370 (46%), Positives = 234/370 (63%), Gaps = 15/370 (4%)
 Frame = +2

Query: 2    PEFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVW 139
            P  K+KV M VGY+G                 IEGELE AIFKAGG+ D+N  NL K  W
Sbjct: 46   PFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRDSNFGNLYKIGW 105

Query: 140  SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
            +RS+RTDKGVHSLAT+I++K+EIP DAW  D +G+ LA+ +N  LP NIRVFS+LP  + 
Sbjct: 106  ARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGIALANCVNSSLPENIRVFSILPSKKR 165

Query: 320  FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
            F A+++C +RKY+YL+PAE+IGI  +S   EIE  IA F DIL+SFEG HPFHNYT+R+K
Sbjct: 166  FDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGEHPFHNYTIRSK 225

Query: 500  NRKSKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPG-IRVLEDDAIDEDYXX 676
             RK        + +S   +   +   +I   +E       +E G + ++E +  + +   
Sbjct: 226  YRKQSPARNLLKNESLLKKGRPSSEKEISGSEESDGEQNGKEKGVVTIVEAENQNPEGNC 285

Query: 677  XXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQ 856
                     +        N V P+QARWLHEPD  DKLS+AHFRRI    C  L+ +   
Sbjct: 286  NEKVSHSKDL--------NSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGM 337

Query: 857  RYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILH 1036
             Y+E+ + GESFM HQIRKM+GT+VA+ R +LP DI+++SL +FSRIVLP+APSEVL+L 
Sbjct: 338  NYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLK 397

Query: 1037 SSQFSFTHDP 1066
             + F+  + P
Sbjct: 398  GNNFALRNHP 407


>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
            lycopersicum]
          Length = 496

 Score =  321 bits (822), Expect = 4e-85
 Identities = 171/370 (46%), Positives = 233/370 (62%), Gaps = 15/370 (4%)
 Frame = +2

Query: 2    PEFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVW 139
            P  K+KV M VGY+G                 IEGELE AIFKAGG+ ++N  NL K  W
Sbjct: 42   PFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLYKIGW 101

Query: 140  SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
            +RS+RTDKGVHSLAT+I++K+EIP DAW  D +G+ LA+ +N  LP NIRVFS+LP  + 
Sbjct: 102  ARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCVNSSLPENIRVFSILPSKKR 161

Query: 320  FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
            F A+++C +RKY+YL+PAE+IGI  +S   EIE  IA F DIL+SFEG HPFHNYT+R+K
Sbjct: 162  FDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIANFNDILNSFEGEHPFHNYTIRSK 221

Query: 500  NRKSKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPG-IRVLEDDAIDEDYXX 676
             RK        +  S   +   +   +I   +E+      +E G + ++E +  + +   
Sbjct: 222  YRKQSPARNLLKNDSLLKKGRPSSEEEISGSEEIDGEQNRKEQGVVTIVEAENQNAEGNC 281

Query: 677  XXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQ 856
                     +        N V P+QARWLHEPD  DKLS+AHFRRI    C  L+ +   
Sbjct: 282  NLKVSHSKDL--------NSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGM 333

Query: 857  RYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILH 1036
             Y+E+ + GESFM HQIRKM+GT+VA+ R +LP D +++SL +FSRIVLP+APSEVL+L 
Sbjct: 334  NYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDTLRMSLCKFSRIVLPLAPSEVLVLK 393

Query: 1037 SSQFSFTHDP 1066
             + F+  + P
Sbjct: 394  GNNFALRNHP 403


>ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X2
            [Solanum tuberosum]
          Length = 423

 Score =  316 bits (810), Expect = 1e-83
 Identities = 167/350 (47%), Positives = 227/350 (64%), Gaps = 1/350 (0%)
 Frame = +2

Query: 20   VAMMVGYIGHRAIEGELESAIFKAGGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAMK 199
            V   V  +   AIEGELE AIFKAGG+ D+N  NL K  W+RS+RTDKGVHSLAT+I++K
Sbjct: 2    VLFWVWILNFFAIEGELEKAIFKAGGIRDSNFGNLYKIGWARSSRTDKGVHSLATMISLK 61

Query: 200  LEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHAKKDCISRKYTYLLPAEV 379
            +EIP DAW  D +G+ LA+ +N  LP NIRVFS+LP  + F A+++C +RKY+YL+PAE+
Sbjct: 62   MEIPADAWEDDPNGIALANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIPAEI 121

Query: 380  IGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRKSKLNTLFSRLKSHAAEA 559
            IGI  +S   EIE  IA F DIL+SFEG HPFHNYT+R+K RK        + +S   + 
Sbjct: 122  IGIKNDSTSSEIEYHIANFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNESLLKKG 181

Query: 560  SHNETSKIKDDDELVEIDETREPG-IRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENI 736
              +   +I   +E       +E G + ++E +  + +            +        N 
Sbjct: 182  RPSSEKEISGSEESDGEQNGKEKGVVTIVEAENQNPEGNCNEKVSHSKDL--------NS 233

Query: 737  VPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKM 916
            V P+QARWLHEPD  DKLS+AHFRRI    C  L+ +    Y+E+ + GESFM HQIRKM
Sbjct: 234  VIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIRKM 293

Query: 917  IGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHSSQFSFTHDP 1066
            +GT+VA+ R +LP DI+++SL +FSRIVLP+APSEVL+L  + F+  + P
Sbjct: 294  VGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHP 343


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis vinifera]
          Length = 564

 Score =  310 bits (795), Expect = 5e-82
 Identities = 179/388 (46%), Positives = 240/388 (61%), Gaps = 31/388 (7%)
 Frame = +2

Query: 11   KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
            K+KV M VGY+G                 IEGELE+A+FKAGG+ D+N  NL K  W RS
Sbjct: 62   KKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRS 121

Query: 149  NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
            +RTDKGVHSLAT+I++K+EIP +AW+ D +G+ LA+ +N HLP NI+VFS+LP  + F A
Sbjct: 122  SRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDA 181

Query: 329  KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
            +++C  R+Y+YLLPAE+IGI  NS   EI++ IA+F DIL++FEG HPF NYT+R+K RK
Sbjct: 182  RRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRK 241

Query: 509  S-------KLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDED 667
                        +F R KS + EAS +E  ++ D +E          GI  +     D D
Sbjct: 242  QFPAKQSPGNGGVFRRAKS-SGEASTSE-FEVSDGEE--------NSGINGVISS--DYD 289

Query: 668  YXXXXXXXXXXXIIPTTVGSEN--------IVPPL--QARWLHEPDMHDKLSAAHFRRIL 817
                         +   VGS N          P L  +ARWLH PD  D++SA+HFR+I 
Sbjct: 290  EGENQNSSESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIF 349

Query: 818  SFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRI 997
            + +C  L+      Y+EL + GESFM HQIRKM+GT++AV R +LP DI+ LSL++FSRI
Sbjct: 350  NCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRI 409

Query: 998  VLPVAPSEVLILHSSQFSFTHDPWRDER 1081
            VLP+APSEVLIL  + FS    P   +R
Sbjct: 410  VLPLAPSEVLILRGNSFSVRKKPGNVKR 437


>gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus vulgaris]
          Length = 507

 Score =  306 bits (783), Expect = 1e-80
 Identities = 169/369 (45%), Positives = 227/369 (61%), Gaps = 14/369 (3%)
 Frame = +2

Query: 2    PEFKRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVW 139
            P  K+KV M V Y+G                 IE ELE+A+FKAGG+ ++N  +L K  W
Sbjct: 56   PSRKKKVVMRVAYVGTNYRGLQMQHDEHFLSTIEKELETAVFKAGGIRESNFGDLQKIKW 115

Query: 140  SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
            +RS+RTDKGVHSLATI++ K+EIP +AW  D  G  LA+ +N +LP++I+V S+LP  + 
Sbjct: 116  ARSSRTDKGVHSLATIVSFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVLSILPSQRS 175

Query: 320  FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
            F  +K+C  RKY+YLLPAE+IGI  +S  +EI+  I++F DIL+ FEG HPFHNYT RAK
Sbjct: 176  FDPRKECAWRKYSYLLPAEIIGIQSDSSNDEIDYHISEFHDILNVFEGEHPFHNYTARAK 235

Query: 500  NRKSKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDYXXX 679
             RK   N   S  KS      +    +  D++E  EIDE     I         E +   
Sbjct: 236  YRKHFPNKQLSS-KSVERLPPYESECEYSDEEENFEIDEAFTENIE-CRSQKCSETHNFG 293

Query: 680  XXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQR 859
                         +  ++     +ARWL+EPD  D+LSA+HFR++   +C  L++     
Sbjct: 294  KPVVGSSNKNGNRLPGQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGYN 353

Query: 860  YIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHS 1039
            YIE+ + GESFM HQIRKM+GT+VAV R VLP DIIKLSL+RFSRI+LP+APSEVLIL  
Sbjct: 354  YIEISIQGESFMLHQIRKMVGTAVAVKRKVLPKDIIKLSLARFSRIILPLAPSEVLILRG 413

Query: 1040 SQFSFTHDP 1066
            ++FS    P
Sbjct: 414  NRFSIRTRP 422


>ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [Sorghum bicolor]
            gi|241921746|gb|EER94890.1| hypothetical protein
            SORBIDRAFT_01g035980 [Sorghum bicolor]
          Length = 520

 Score =  305 bits (780), Expect = 3e-80
 Identities = 168/366 (45%), Positives = 230/366 (62%), Gaps = 20/366 (5%)
 Frame = +2

Query: 11   KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
            K++V + +GYIG                 IE  LESAIFK+GG+L++N   L K  W RS
Sbjct: 76   KKRVVLRIGYIGTEYRGLQKQRELGVDSTIESVLESAIFKSGGILESNYGKLQKVGWERS 135

Query: 149  NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
            +RTDKGVHSLAT+I++K+EIP  AW  D DG+ LA  +N +LP N+RVFS+LP  + F  
Sbjct: 136  SRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPAQRSFDV 195

Query: 329  KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
            +++C+ R+Y YLLPAEVIGI +   PEEI+  +++F  IL  FEG HPFHNYT RAK RK
Sbjct: 196  RRECLYREYFYLLPAEVIGIKDGYSPEEIQEHLSEFNSILKGFEGNHPFHNYTARAKYRK 255

Query: 509  ------SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDY 670
                   +       LKS ++E    E+S +    E    D+  +  I  ++  A +  +
Sbjct: 256  VLAGRHPRAKGASLTLKSMSSEMGMAESSSL----ESTSSDDDEDLNISSIDSGASENIF 311

Query: 671  XXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIK 850
                              SE+ V  +QARWLHEPD  D+L+A+HFR I++ +C +LQ+  
Sbjct: 312  VNDILKF-----------SESRVQ-IQARWLHEPDESDRLNASHFRDIITCSCGELQTSS 359

Query: 851  NQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLI 1030
              +++EL + G SFM HQIRKM+GT+VAV RG+LP DII+LSL++FSRIVLP+APSEVLI
Sbjct: 360  GIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLI 419

Query: 1031 LHSSQF 1048
            L  + F
Sbjct: 420  LKDNSF 425


>gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japonica Group]
          Length = 516

 Score =  303 bits (777), Expect = 7e-80
 Identities = 167/366 (45%), Positives = 227/366 (62%), Gaps = 20/366 (5%)
 Frame = +2

Query: 11   KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
            K++V + VGY+G                 IE  LE+AIFKAGG+L++N   L K  W RS
Sbjct: 71   KKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQKVGWERS 130

Query: 149  NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
            +RTDKGVHSLAT+I++K+EIP  AW  D DG+ L++ +N +LP N+RVFSVLP  + F  
Sbjct: 131  SRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPAQRSFDV 190

Query: 329  KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
            +++C+ R+Y YLLPAE+IGI      EE+   +++F  IL  FEG HPFHNYT RAK RK
Sbjct: 191  RRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTARAKYRK 250

Query: 509  ------SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDY 670
                   K+    S + S   E S +++S   DD    + DE       ++     ++ Y
Sbjct: 251  VLAGRHRKVKGASSAVNSMPTEMSLDQSS--SDDGTTSDHDEEDLNSSSIIGSSVPEDSY 308

Query: 671  XXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIK 850
                              SE  V  ++ARWLHEPD +D+L+A+HFR IL+F+C +LQ   
Sbjct: 309  KDNPEF------------SEKQV-QIRARWLHEPDENDRLNASHFRDILTFSCGELQISS 355

Query: 851  NQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLI 1030
              +++EL + G SFM HQIRKM+GTSVAV RG+LP DII LSL++FSRIVLP+APSEVL+
Sbjct: 356  GIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLV 415

Query: 1031 LHSSQF 1048
            L  + F
Sbjct: 416  LRDNSF 421


>ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group]
            gi|108708043|gb|ABF95838.1| tRNA pseudouridine synthase
            family protein, expressed [Oryza sativa Japonica Group]
            gi|113548527|dbj|BAF11970.1| Os03g0338600 [Oryza sativa
            Japonica Group]
          Length = 516

 Score =  303 bits (777), Expect = 7e-80
 Identities = 167/366 (45%), Positives = 227/366 (62%), Gaps = 20/366 (5%)
 Frame = +2

Query: 11   KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
            K++V + VGY+G                 IE  LE+AIFKAGG+L++N   L K  W RS
Sbjct: 71   KKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQKVGWERS 130

Query: 149  NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
            +RTDKGVHSLAT+I++K+EIP  AW  D DG+ L++ +N +LP N+RVFSVLP  + F  
Sbjct: 131  SRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPAQRSFDV 190

Query: 329  KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
            +++C+ R+Y YLLPAE+IGI      EE+   +++F  IL  FEG HPFHNYT RAK RK
Sbjct: 191  RRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTARAKYRK 250

Query: 509  ------SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDY 670
                   K+    S + S   E S +++S   DD    + DE       ++     ++ Y
Sbjct: 251  VLAGRHRKVKGASSAVNSMPTEMSLDQSS--SDDGTTSDHDEEDLNSSSIIGSSVPEDSY 308

Query: 671  XXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIK 850
                              SE  V  ++ARWLHEPD +D+L+A+HFR IL+F+C +LQ   
Sbjct: 309  KDNPEF------------SEKQV-QIRARWLHEPDENDRLNASHFRDILTFSCGELQISS 355

Query: 851  NQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLI 1030
              +++EL + G SFM HQIRKM+GTSVAV RG+LP DII LSL++FSRIVLP+APSEVL+
Sbjct: 356  GIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLV 415

Query: 1031 LHSSQF 1048
            L  + F
Sbjct: 416  LRDNSF 421


>ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synthase-like [Setaria
            italica]
          Length = 519

 Score =  303 bits (775), Expect = 1e-79
 Identities = 167/370 (45%), Positives = 231/370 (62%), Gaps = 24/370 (6%)
 Frame = +2

Query: 11   KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
            K++V + VGY+G                 IE  LESAIFKAGG+L++N   L K  W RS
Sbjct: 75   KKRVVLRVGYVGTEYRGLQKQRELSVDSTIESVLESAIFKAGGILESNYGKLQKVGWERS 134

Query: 149  NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
            +RTDKGVHSLAT+I++K+EIP  AW  D DG+ LA  +N +LP N+RVFS+LP  + F  
Sbjct: 135  SRTDKGVHSLATMISLKMEIPDRAWENDPDGISLASFINSNLPNNVRVFSILPAQRSFDV 194

Query: 329  KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
            +++C+ R+Y YLLPAE IGI +    EE++  +++F  IL  FEG HPFHNYT RAK RK
Sbjct: 195  RRECLYREYFYLLPAETIGIKDGCSSEEVQEHLSEFNSILKGFEGNHPFHNYTARAKYRK 254

Query: 509  ------SKLNTLFSRLKSHAAEASHNETSK----IKDDDELVEIDETREPGIRVLEDDAI 658
                   ++      LKS ++E    E S       D DE + I    + G+   ED+ +
Sbjct: 255  VLAGSHRRVKGACLPLKSMSSETGMEENSSEDNTPSDHDEDLNISSMIDSGV---EDNCL 311

Query: 659  DEDYXXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDL 838
            ++              +    G++     +QARWL+EPD  D+L+A+HFR I++ +C +L
Sbjct: 312  ND--------------VAKHFGNQ---VQIQARWLYEPDESDRLNASHFRDIITCSCGEL 354

Query: 839  QSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPS 1018
            QS    +++EL + G SFM HQIRKM+GT+VAV RG+LP DII+LSL++FSRIVLP+APS
Sbjct: 355  QSSSGIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPS 414

Query: 1019 EVLILHSSQF 1048
            EVLIL  + F
Sbjct: 415  EVLILRDNSF 424


>ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synthase-like [Brachypodium
            distachyon]
          Length = 522

 Score =  301 bits (772), Expect = 2e-79
 Identities = 170/374 (45%), Positives = 230/374 (61%), Gaps = 28/374 (7%)
 Frame = +2

Query: 11   KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
            K++V + VGY+G                 IE  LESAIFKAGG+L++N   L K  W RS
Sbjct: 76   KKRVVLRVGYVGSEYRGLQKQRELSADSTIESVLESAIFKAGGILESNYGKLQKVGWERS 135

Query: 149  NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
            +RTDKGVHSLAT+I++K+EIP  AW  D DG+ LA+ +N +LP NI+VFS+LP  + F  
Sbjct: 136  SRTDKGVHSLATMISLKMEIPDRAWENDPDGIALANFINSNLPNNIKVFSILPAQRSFDV 195

Query: 329  KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
            +++C+ R+Y YLLPAE+IGI      EE+E  + +F  IL  FEG HPFHNYT RAK RK
Sbjct: 196  RRECLYREYFYLLPAEIIGIKSGCSSEEVEEHLIEFNSILKGFEGNHPFHNYTARAKYRK 255

Query: 509  -------------SKLNTLFSRLKSHAAEASHNETSKIKD-DDELVEIDETREPGIRVLE 646
                         S +N++ S L   A + S N+     D DDE +           V++
Sbjct: 256  VLAGAHRRSKETSSTINSIPSEL---AVDQSPNDDGATSDADDEHLNFSS-------VVD 305

Query: 647  DDAIDEDYXXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFT 826
                + D+                   EN V  +QARWLHEP+ +D+LSA+HFR I++ +
Sbjct: 306  SSLPENDWNKDNPKHH-----------ENHVQ-IQARWLHEPNENDRLSASHFRDIITCS 353

Query: 827  CSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLP 1006
            C +LQS    +++EL + G SFM HQIRKM+GT+VAV RG+LP +II+LSL++FSRIVLP
Sbjct: 354  CGELQSSSGIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKEIIELSLAKFSRIVLP 413

Query: 1007 VAPSEVLILHSSQF 1048
            +APSEVLIL  + F
Sbjct: 414  IAPSEVLILRDNSF 427


>gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| TPA: hypothetical
            protein ZEAMMB73_241728 [Zea mays]
          Length = 516

 Score =  301 bits (772), Expect = 2e-79
 Identities = 165/366 (45%), Positives = 229/366 (62%), Gaps = 20/366 (5%)
 Frame = +2

Query: 11   KRKVAMMVGYIG--------------HRAIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
            K++V + +GY+G                 IE  LESAIFK+GG+L++N   L K  W RS
Sbjct: 76   KKRVVLRIGYVGTDYRGLQKQQELGVDSTIESVLESAIFKSGGILESNYGKLQKIGWERS 135

Query: 149  NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
            +RTDKGVHSLAT+I++K+EIP  AW  D DG+ LA  +N +LP N+RVFS+LP  + F  
Sbjct: 136  SRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPAQRSFDV 195

Query: 329  KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
            +++C+ R+Y YLLPAE+IGI ++   EE++  +++F  IL  FEG HPFHNYT RAK RK
Sbjct: 196  RRECLYREYFYLLPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEGNHPFHNYTARAKYRK 255

Query: 509  ------SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDY 670
                   +     S LKS +++    E+S     +E    D   +  I  + D  I ED 
Sbjct: 256  VLAGRHRRAKGASSALKSMSSDTGMAESS----SEESTSPDHDEDLNISSIFDSGIPEDT 311

Query: 671  XXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIK 850
                              SE+ +  +QARWLHEPD  D+L+A+HFR I++ +C DLQ+  
Sbjct: 312  RVNGILKL----------SEDRL-QIQARWLHEPDESDRLNASHFRDIITCSCGDLQTSS 360

Query: 851  NQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLI 1030
              +++EL + G SFM HQIRKM+GT+V V RG+LP DII+LSL++FSRIVLP+APSEVL+
Sbjct: 361  GIQFVELTICGVSFMLHQIRKMVGTAVTVKRGLLPRDIIELSLAKFSRIVLPIAPSEVLV 420

Query: 1031 LHSSQF 1048
            L  + F
Sbjct: 421  LKDNSF 426


>ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
            [Glycine max] gi|571441413|ref|XP_006575436.1| PREDICTED:
            putative tRNA pseudouridine synthase-like isoform X2
            [Glycine max] gi|571441415|ref|XP_006575437.1| PREDICTED:
            putative tRNA pseudouridine synthase-like isoform X3
            [Glycine max] gi|571441417|ref|XP_006575438.1| PREDICTED:
            putative tRNA pseudouridine synthase-like isoform X4
            [Glycine max]
          Length = 493

 Score =  301 bits (771), Expect = 3e-79
 Identities = 168/371 (45%), Positives = 229/371 (61%), Gaps = 16/371 (4%)
 Frame = +2

Query: 2    PEFKRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVW 139
            P  K+KVAM+V Y+G                 IE ELE+AIFKAGG+ ++N  +L K  W
Sbjct: 41   PSRKKKVAMLVAYVGTNYRGLQMQHDEHSLSTIEKELETAIFKAGGIRESNFGDLQKIGW 100

Query: 140  SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
            +RS+RTDKGVHSLATII+ K+EIP +AW  D  G  LA+ +N +LP++I+V S+LP  + 
Sbjct: 101  ARSSRTDKGVHSLATIISFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVISILPSQRS 160

Query: 320  FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
            F  +K+CI RKY+YLLPAE+IGI ++   +E++  I++F DIL+ FEG HPFHNYT R+K
Sbjct: 161  FDPRKECILRKYSYLLPAEIIGI-QSHFSDEVDYHISEFNDILNVFEGIHPFHNYTARSK 219

Query: 500  NRKSKLNTLFSRLKSHAA--EASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDYX 673
             RK   N   S     +A    S+    +  D +E  E DE     I V +     E + 
Sbjct: 220  YRKQFPNRQSSSKSGTSARESLSYESECEYSDGEENSETDEAYTENI-VCQSQKFSETHH 278

Query: 674  XXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKN 853
                           +  ++     +ARWL+EPD  D+LSA+HFR++   +C  L++   
Sbjct: 279  FAEPVVGSSNKNGNGLHDQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLG 338

Query: 854  QRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLIL 1033
              YIE+ + GESFM HQIRKM+GT+VAV R  LP DIIKLSL+RFSRI+LP+APSE LIL
Sbjct: 339  YNYIEISIQGESFMLHQIRKMVGTAVAVKRKALPKDIIKLSLTRFSRIILPLAPSEALIL 398

Query: 1034 HSSQFSFTHDP 1066
              ++FS    P
Sbjct: 399  RGNRFSIRTRP 409


>ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Populus trichocarpa]
            gi|550325882|gb|EEE95884.2| hypothetical protein
            POPTR_0013s15030g [Populus trichocarpa]
          Length = 505

 Score =  299 bits (766), Expect = 1e-78
 Identities = 168/364 (46%), Positives = 231/364 (63%), Gaps = 17/364 (4%)
 Frame = +2

Query: 11   KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
            K+KVA+ VGY+G                 IEGELE AI++AGG+ ++N  NL+K  W+RS
Sbjct: 75   KKKVALRVGYVGTDYRGLQKQHDQHSLLTIEGELERAIYEAGGIRESNYGNLNKISWARS 134

Query: 149  NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
            +RTDKGVHSLAT I MK+EIP +AW+ DL G+VLA  +N +LP +IRV S+LP  + F  
Sbjct: 135  SRTDKGVHSLATTITMKMEIPENAWKDDLYGMVLAKHVNSYLPDSIRVLSILPAQKSFDP 194

Query: 329  KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
            +++C  RKY+YLLPAEVIGI  +    EI++ I+ F +IL++FEG HPFHNYTVR+K R+
Sbjct: 195  RRECDIRKYSYLLPAEVIGIKSHFSMAEIDDHISDFNNILNAFEGDHPFHNYTVRSKYRR 254

Query: 509  SKLNTLFSRLKSHAAEASHNE--TSKIKDDDELVEIDE-TREPGIRVLEDDAIDEDYXXX 679
                  +     H ++ + +   TS    ++  VE+ + + E  I  L  D + +     
Sbjct: 255  K-----YPTKNGHVSKRARSSWGTSASGSEENHVELSQNSLESSICDLNGDILKDQ---- 305

Query: 680  XXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQR 859
                           S N+  PL+ARWLHEPD  D++ AAHFR+I   +C  L+      
Sbjct: 306  ---------------SSNL--PLRARWLHEPDETDRIGAAHFRKIFRCSCGKLEKSLGFD 348

Query: 860  YIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHS 1039
            ++E+ + GESFM HQIRKM+GT+VAV R VLP D+I LSL++FSRIVLP+APSEVLIL  
Sbjct: 349  FVEISIWGESFMLHQIRKMVGTAVAVKRKVLPRDLIMLSLTKFSRIVLPLAPSEVLILRG 408

Query: 1040 SQFS 1051
            + FS
Sbjct: 409  NDFS 412


>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
            [Citrus sinensis]
          Length = 539

 Score =  298 bits (764), Expect = 2e-78
 Identities = 170/384 (44%), Positives = 233/384 (60%), Gaps = 29/384 (7%)
 Frame = +2

Query: 2    PEFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVW 139
            P  K+KVA+ VGY+G                 IEGELE+A+FKAGG+ ++N  NL K  W
Sbjct: 74   PVRKKKVALRVGYVGTDYRGLQMQRDEHSLSTIEGELETAVFKAGGIRESNYGNLQKIAW 133

Query: 140  SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
            +RS+RTDKGVHSLAT+I +K+EIP DAW+ D  G+ LA ++N HLP NI+VFS+LP  + 
Sbjct: 134  ARSSRTDKGVHSLATMICLKMEIPPDAWKDDPYGIDLAKRVNAHLPRNIKVFSILPSQRS 193

Query: 320  FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
            F  +++C  RKY+YLLPAEVIGI+      EI++ I+ F  IL+ FEG HPFHNYT R+K
Sbjct: 194  FDPRRECNLRKYSYLLPAEVIGINSQLTAAEIDSHISDFNAILNEFEGEHPFHNYTERSK 253

Query: 500  NR-------------KSKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRV 640
             R             K+  + +FSR++   +E   +  SK+++ D     +E    G  +
Sbjct: 254  YRRKPHKTGCVSKRAKASKDAVFSRVEE--SEGEEDGFSKVEESDG----EEDLGIGGEI 307

Query: 641  LEDD--AIDEDYXXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRI 814
              DD  A                     +  +N    ++ARWL+E D  DKLSA+HFR+I
Sbjct: 308  SSDDEKANQNSMVSGVHQEDCCNQHANGLKDQNSSSVIRARWLYETDEADKLSASHFRKI 367

Query: 815  LSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSR 994
             S +C  L+      Y+E+ + GESFM HQIRKM+GT+VAV R +LP DI+ LSL++ SR
Sbjct: 368  FSCSCGKLEKSLGFGYVEISISGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKHSR 427

Query: 995  IVLPVAPSEVLILHSSQFSFTHDP 1066
            IVLP+APSEVL L ++ FS    P
Sbjct: 428  IVLPLAPSEVLFLRANSFSVRTRP 451


>ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synthase-like [Oryza
            brachyantha]
          Length = 518

 Score =  298 bits (763), Expect = 3e-78
 Identities = 163/366 (44%), Positives = 223/366 (60%), Gaps = 20/366 (5%)
 Frame = +2

Query: 11   KRKVAMMVGYIGHR--------------AIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
            K++V + VGY+G                 IE  LE+AIFK GG+L++N   L K  W RS
Sbjct: 73   KKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKTGGILESNYGKLQKVGWERS 132

Query: 149  NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
            +RTDKGVHSLAT+I++K+EIP  AW  D DG+ L++ +N +LP N+RVFS+LP  + F  
Sbjct: 133  SRTDKGVHSLATMISLKMEIPDRAWENDPDGISLSNFINSNLPDNVRVFSILPAQRSFDV 192

Query: 329  KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
            +K+C+ R Y YL+PAE+IGI +    +E+   +++F  IL  FEG HPFHNYT RAK RK
Sbjct: 193  RKECLYRDYLYLIPAEIIGIKDGCSSDEVVEHLSEFNYILKGFEGNHPFHNYTARAKYRK 252

Query: 509  SKLNTLFSRLKSHAAEASHNETSKI------KDDDELVEIDETREPGIRVLEDDAIDEDY 670
                    R    A+ A ++ +SK+       DD    + DE       ++   A +  Y
Sbjct: 253  VLAGR--HRKVKRASSAVNSMSSKMGMEGISSDDGTSSDHDEEDLNSSSLIGSSAPENSY 310

Query: 671  XXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIK 850
                        I             +ARWLHEPD +D+L+A+HFR IL+F+C +LQS  
Sbjct: 311  KDSPELSKKQVQI-------------RARWLHEPDENDRLNASHFRDILTFSCGELQSSS 357

Query: 851  NQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLI 1030
              +++EL + G SFM HQIRKM+GT+VAV RG+LP DII LSL++FSRIVLP+APSEVLI
Sbjct: 358  GMQFVELTISGVSFMLHQIRKMVGTAVAVKRGLLPKDIIALSLAKFSRIVLPIAPSEVLI 417

Query: 1031 LHSSQF 1048
            L  + F
Sbjct: 418  LRDNSF 423


>gb|AER92594.1| putative pseudouridine synthase family protein [Linum usitatissimum]
          Length = 565

 Score =  298 bits (763), Expect = 3e-78
 Identities = 164/374 (43%), Positives = 227/374 (60%), Gaps = 22/374 (5%)
 Frame = +2

Query: 2    PEFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVW 139
            P  K+KV + VGY+G                 +E ELE+AIFKAGG+L++N  +L+K  W
Sbjct: 111  PIRKKKVVLRVGYVGTDYRGLQKQHDEHSLSTVEAELENAIFKAGGILESNYGHLNKVAW 170

Query: 140  SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
            +RS+RTDKGVHSLAT I MK+EIP  AW+ D  G+ LA  +N +LP +IR+FS+LP  + 
Sbjct: 171  ARSSRTDKGVHSLATTITMKMEIPETAWKDDPYGIALARTVNSYLPDSIRIFSILPAQKN 230

Query: 320  FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
            F  + +C  RKY+YLLPAE+IGI  +S  +EI   I+ FR IL++FEG HPFHNYT+R+K
Sbjct: 231  FDPRLECNMRKYSYLLPAEIIGIRSHSDADEISEHISDFRKILNAFEGDHPFHNYTIRSK 290

Query: 500  NRKSKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDYXXX 679
             R       F     H +          K D   ++I +    G    E++ +DE     
Sbjct: 291  YRSQIRRNTFPEKNYHFS----------KRDRAFIQIGDPVSEGSD--EEEGVDE----- 333

Query: 680  XXXXXXXXIIPTTVGSENIVP--------PLQARWLHEPDMHDKLSAAHFRRILSFTCSD 835
                    I+     ++NI P         L ARWL EPD  D++ A+HFR+I+  +C +
Sbjct: 334  --------IVQLDNSNQNIEPVKDHQSSGQLVARWLXEPDERDRIGASHFRKIIRCSCGE 385

Query: 836  LQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAP 1015
            L+      ++E+ + GESFM HQIRKM+GT+VAV R +LP DI+ LSL++FSRIVLP+AP
Sbjct: 386  LEKSSGYNFVEISIWGESFMLHQIRKMVGTAVAVKRDLLPRDILTLSLAKFSRIVLPLAP 445

Query: 1016 SEVLILHSSQFSFT 1057
            SEVLIL  + +S T
Sbjct: 446  SEVLILRGNSYSLT 459


>gb|EMS58771.1| Putative tRNA pseudouridine synthase [Triticum urartu]
          Length = 450

 Score =  297 bits (760), Expect = 6e-78
 Identities = 162/349 (46%), Positives = 221/349 (63%), Gaps = 5/349 (1%)
 Frame = +2

Query: 17   KVAMMVGYIGHRAIEGELESAIFKAGGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAM 196
            +V  M    G   IE  LESAIFKAGG+L++N   L K  W RS+RTDKGVHSLAT+I++
Sbjct: 20   EVYNMNAIYGCTTIESVLESAIFKAGGILESNYGKLQKVGWERSSRTDKGVHSLATMISL 79

Query: 197  KLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHAKKDCISRKYTYLLPAE 376
            K+EIP  AW +D DG+ LA+ +N +LP NI+VFS+LP  + F  +++C+ R+Y YLLPAE
Sbjct: 80   KMEIPDRAWEKDPDGIALANFINSNLPDNIKVFSILPAQRSFDVRRECLYREYFYLLPAE 139

Query: 377  VIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRKSKLNTLFSRLKSHAAE 556
            +IGI  +    E+E  + +F +IL  FEG HPFHNYT RAK RK  L     R K  +  
Sbjct: 140  IIGIKSSCSSGEVEEHLIEFNNILKCFEGNHPFHNYTARAKYRK-VLAGAHRRAKETSTT 198

Query: 557  ASHNETSKIKD-----DDELVEIDETREPGIRVLEDDAIDEDYXXXXXXXXXXXIIPTTV 721
            A    +  + D     D    +IDE       +L+  A +++            +     
Sbjct: 199  AHSIPSEMVADKSTSGDGTTSDIDEEYLNSPSILDSSAPEDNCNMDNPELPESHV----- 253

Query: 722  GSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQRYIELMVHGESFMYH 901
                    +QARWLHEP+ +D+LSA+HFR IL+ +C +L+S    +++EL + G SFM H
Sbjct: 254  -------QIQARWLHEPNDNDRLSASHFRDILTCSCRELRSSSGVQFVELTICGASFMLH 306

Query: 902  QIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHSSQF 1048
            QIRKM+GT+VAV RG+LP DII+LSL++FSRIVLP+APSEVLIL  + F
Sbjct: 307  QIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLILRDNSF 355


>gb|EMT32485.1| Putative tRNA pseudouridine synthase [Aegilops tauschii]
          Length = 429

 Score =  296 bits (758), Expect = 1e-77
 Identities = 159/337 (47%), Positives = 217/337 (64%), Gaps = 5/337 (1%)
 Frame = +2

Query: 53   AIEGELESAIFKAGGMLDTNSDNLDKAVWSRSNRTDKGVHSLATIIAMKLEIPRDAWRRD 232
            AIE  LESAIFKAGG+L++N   L K  W RS+RTDKGVHSLAT+I++K+EIP  AW +D
Sbjct: 11   AIESVLESAIFKAGGILESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEKD 70

Query: 233  LDGLVLADKLNVHLPYNIRVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEE 412
             DG+ LA+ +N +LP NI+VFS+LP  + F  +++C+ R+Y YLLPAE+IGI  +    E
Sbjct: 71   PDGIALANFINSNLPDNIKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSSCSSGE 130

Query: 413  IENCIAKFRDILSSFEGRHPFHNYTVRAKNRKSKLNTLFSRLKSHAAEASHNETSKIKD- 589
            +E  + +F +IL  FEG HPFHNYT RAK RK  L     R K  +  A       + D 
Sbjct: 131  VEEHLIEFNNILKGFEGNHPFHNYTARAKYRK-VLAGAHRRAKETSTTAHSIPFEMVADQ 189

Query: 590  ----DDELVEIDETREPGIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIVPPLQAR 757
                D    +IDE       +L+  A +++            +             +QAR
Sbjct: 190  STSGDGTTSDIDEEYLNSPSILDSSAPEDNCKMDNPELPESRV------------QIQAR 237

Query: 758  WLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAV 937
            WLHEP+ +D+LSA+HFR IL+ +C +L+S    +++EL + G SFM HQIRKM+GT+VAV
Sbjct: 238  WLHEPNDNDRLSASHFRDILTCSCGELRSSSGVQFVELTICGVSFMLHQIRKMVGTAVAV 297

Query: 938  IRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHSSQF 1048
             RG+LP DII+LSL++FSR+VLP+APSEVLIL  + F
Sbjct: 298  KRGLLPKDIIQLSLAKFSRVVLPIAPSEVLILRDNSF 334


>gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus vulgaris]
          Length = 512

 Score =  295 bits (756), Expect = 2e-77
 Identities = 163/370 (44%), Positives = 229/370 (61%), Gaps = 21/370 (5%)
 Frame = +2

Query: 2    PEFKRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVW 139
            P  K+KV M VGY+G                 IE ELE+AIF AGGM D+N  +L+K  W
Sbjct: 66   PFLKKKVVMRVGYVGTDFRGLQIQRDEHTLSTIEKELETAIFTAGGMRDSNFGDLNKVKW 125

Query: 140  SRSNRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQG 319
             RS+RTDKGVHSLAT+I+ K+EIP +AW+ D  G+ LA+++N +LPY IRVFS+LP ++ 
Sbjct: 126  GRSSRTDKGVHSLATVISFKMEIPENAWKGDDYGIALANRINSYLPYTIRVFSILPSTKR 185

Query: 320  FHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAK 499
            F  +++C  RKY+YLLPA++IGI  +   +EI+  I++F  IL+ FEG HPFHNYTVR+K
Sbjct: 186  FDPRRECNLRKYSYLLPADIIGIQSHFSKDEIDFHISEFNSILNVFEGEHPFHNYTVRSK 245

Query: 500  NRK-------SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAI 658
             RK       S  + +  RL S +  +     S   DD + V+   T       L D   
Sbjct: 246  YRKKYQVRQSSGSDVMSDRLGSSSLASGFESESDDSDDYDFVDGSPT------TLSDK-- 297

Query: 659  DEDYXXXXXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDL 838
            +E +                + S+N    ++ARWLHEPD  D+L+A+HFR +   +C  L
Sbjct: 298  EESHKPPESSE------SNGLSSQNSNVVVRARWLHEPDEKDRLNASHFRNVFRCSCGKL 351

Query: 839  QSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPS 1018
            ++     Y+E+ + G+SFM HQIRKM+GT+VAV R ++P D+I +SL++FSRIVLP+AP 
Sbjct: 352  ETSMGYDYVEIHIWGDSFMLHQIRKMVGTAVAVKRKLIPKDVISVSLNKFSRIVLPLAPP 411

Query: 1019 EVLILHSSQF 1048
            EVLIL  + F
Sbjct: 412  EVLILRGNAF 421


>ref|XP_006294040.1| hypothetical protein CARUB_v10023036mg [Capsella rubella]
            gi|482562748|gb|EOA26938.1| hypothetical protein
            CARUB_v10023036mg [Capsella rubella]
          Length = 508

 Score =  293 bits (751), Expect = 7e-77
 Identities = 165/371 (44%), Positives = 224/371 (60%), Gaps = 17/371 (4%)
 Frame = +2

Query: 11   KRKVAMMVGYIGH--------------RAIEGELESAIFKAGGMLDTNSDNLDKAVWSRS 148
            K+KV + +GY+G               + IEGELE AI+KAGG+ D+N  +L K  W+RS
Sbjct: 63   KKKVVIRIGYVGTDYRGLQIQRDDPAIKTIEGELEVAIYKAGGIRDSNYGDLHKIGWARS 122

Query: 149  NRTDKGVHSLATIIAMKLEIPRDAWRRDLDGLVLADKLNVHLPYNIRVFSVLPISQGFHA 328
            +RTDKGVHSLAT I++K+EIP  AW+ D  G+VLA  ++ HLP NIRVFSVLP ++ F  
Sbjct: 123  SRTDKGVHSLATSISLKMEIPETAWKDDPQGIVLAKCISKHLPENIRVFSVLPSNRRFDP 182

Query: 329  KKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGRHPFHNYTVRAKNRK 508
            +++C  RKY+YLLP +VIGI  N   +EI+  I  F +IL  FEG +PFHNYT R++ R+
Sbjct: 183  RRECTLRKYSYLLPVDVIGIKSNFTSDEIDYHITDFNEILKEFEGEYPFHNYTQRSRYRR 242

Query: 509  ---SKLNTLFSRLKSHAAEASHNETSKIKDDDELVEIDETREPGIRVLEDDAIDEDYXXX 679
                KL     R          +ET   +++   +E +E  E  +    D   DE +   
Sbjct: 243  KSEQKLKQRNGRPPKEPKSVKASETEFAEENHREIEEEEEEEKEV----DGESDEHF--- 295

Query: 680  XXXXXXXXIIPTTVGSENIVPPLQARWLHEPDMHDKLSAAHFRRILSFTCSDLQSIKNQR 859
                           S+N     +A+WL+EPD  DKLS AHFR++       L+S    R
Sbjct: 296  ---------------SDNSQVNTRAKWLYEPDETDKLSGAHFRKVFRCRSGKLESSLGFR 340

Query: 860  YIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLPVAPSEVLILHS 1039
            ++E+ + GESFM HQIRKMIGT+VAV R +LP DII+LSL++F+RIVLP+APSEVLIL  
Sbjct: 341  FVEISIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRG 400

Query: 1040 SQFSFTHDPWR 1072
            + F     P R
Sbjct: 401  NSFEVRRFPQR 411


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