BLASTX nr result
ID: Ephedra28_contig00001530
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00001530
(1178 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK23497.1| unknown [Picea sitchensis] 356 9e-96
gb|EOY13020.1| RNA-binding S4 domain-containing protein [Theobro... 321 3e-85
ref|XP_006464766.1| PREDICTED: uncharacterized protein LOC102629... 316 1e-83
ref|XP_006464765.1| PREDICTED: uncharacterized protein LOC102629... 316 1e-83
ref|XP_006451831.1| hypothetical protein CICLE_v10008924mg [Citr... 316 1e-83
ref|XP_006392826.1| hypothetical protein EUTSA_v10011660mg [Eutr... 316 1e-83
ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH... 314 5e-83
ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabi... 312 2e-82
emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera] 311 3e-82
ref|XP_004969937.1| PREDICTED: uncharacterized protein LOC101766... 311 3e-82
ref|XP_006305195.1| hypothetical protein CARUB_v10009559mg, part... 310 6e-82
ref|XP_002456351.1| hypothetical protein SORBIDRAFT_03g034470 [S... 310 6e-82
gb|EMJ13796.1| hypothetical protein PRUPE_ppa016812mg, partial [... 310 7e-82
ref|XP_004296512.1| PREDICTED: putative RNA-binding protein YlmH... 309 1e-81
ref|XP_006451829.1| hypothetical protein CICLE_v10008924mg [Citr... 308 4e-81
gb|EEC71469.1| hypothetical protein OsI_03722 [Oryza sativa Indi... 306 8e-81
ref|NP_001044235.2| Os01g0747700 [Oryza sativa Japonica Group] g... 306 8e-81
ref|NP_001130102.1| uncharacterized protein LOC100191195 [Zea ma... 306 1e-80
gb|ESW32024.1| hypothetical protein PHAVU_002G286700g [Phaseolus... 306 1e-80
gb|ACG39001.1| RNA-binding S4 [Zea mays] 305 3e-80
>gb|ABK23497.1| unknown [Picea sitchensis]
Length = 332
Score = 356 bits (914), Expect = 9e-96
Identities = 184/265 (69%), Positives = 220/265 (83%), Gaps = 6/265 (2%)
Frame = -2
Query: 994 VAVFKPENENLSKVLDNTNREL-IKPILDQAVKISRRRDFFHSDFLTPNILEDALIALKN 818
VA K E E+ K L + E +K IL QA K + R+ FHSDFL P ++EDAL A+K
Sbjct: 68 VAALKYEKEDHLKGLSKGSAESPVKLILVQAQKAASGREIFHSDFLMPPVVEDALSAIKK 127
Query: 817 VPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGAVLS 638
+ DVE +VQGGYP+AERCRL+IGH DVISS PDAVSA S+SGNF+F PASHGDFLGAVL+
Sbjct: 128 LSDVEALVQGGYPQAERCRLSIGHTDVISSAPDAVSALSISGNFTFDPASHGDFLGAVLA 187
Query: 637 AGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQPPRT 458
GI+REK+GDILLQ EKGAQII VPELVD++ S+ +V NVPV+CSPIPLLALE+QPPRT
Sbjct: 188 TGIRREKVGDILLQGEKGAQIIVVPELVDYIVSSLTQVHNVPVSCSPIPLLALEFQPPRT 247
Query: 457 RAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIISIR- 281
+ ++SVEASLRVDAIASAGFQ+SRSKLV+LISGGDVRVNW+EVTKNGT LKTGDIISI+
Sbjct: 248 KVLKSVEASLRVDAIASAGFQMSRSKLVNLISGGDVRVNWSEVTKNGTLLKTGDIISIKG 307
Query: 280 ----ELREIKTTKKGKYSIELIRYL 218
+L EIKTT+KGK++++LIRYL
Sbjct: 308 KGRVQLGEIKTTRKGKFAVDLIRYL 332
>gb|EOY13020.1| RNA-binding S4 domain-containing protein [Theobroma cacao]
Length = 319
Score = 321 bits (823), Expect = 3e-85
Identities = 159/270 (58%), Positives = 211/270 (78%), Gaps = 6/270 (2%)
Frame = -2
Query: 1009 GFCDVVAVFKPENENLSK-VLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDAL 833
G C V V K +N+ L K V D + E +K IL+ A + + RR+ H+DFLTP ++++++
Sbjct: 50 GLCHVAQVIKGDNDVLLKGVGDKSAIEEVKHILEMARRAATRREVLHTDFLTPPVIKESM 109
Query: 832 IALKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFL 653
+ L + DV+ V QGGYP+AERCR++IGH +V++S PD V+A +++GNF F P SHGDFL
Sbjct: 110 LVLGKLADVKAVAQGGYPQAERCRISIGHSEVLTSDPDVVAALNITGNFGFQPCSHGDFL 169
Query: 652 GAVLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEY 473
GA+L GI REK+GDI+LQ EKGA I+ VPELVDFL +++KV NV V+C IPLLALEY
Sbjct: 170 GAILGTGIAREKLGDIILQGEKGAHILIVPELVDFLMSTLDKVGNVSVSCMQIPLLALEY 229
Query: 472 QPPRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDI 293
+PPRT++ ++VEASLRVDA+ASAGF+ISRSKLV+LIS GDVRVNWT VTKNGT LKTGDI
Sbjct: 230 EPPRTQSFKTVEASLRVDALASAGFKISRSKLVNLISNGDVRVNWTSVTKNGTILKTGDI 289
Query: 292 ISIR-----ELREIKTTKKGKYSIELIRYL 218
+S+ ++ EI TT+KGK+++ELIRYL
Sbjct: 290 VSVSGKGRLKIGEINTTRKGKFAVELIRYL 319
>ref|XP_006464766.1| PREDICTED: uncharacterized protein LOC102629495 isoform X2 [Citrus
sinensis]
Length = 320
Score = 316 bits (810), Expect = 1e-83
Identities = 154/270 (57%), Positives = 211/270 (78%), Gaps = 6/270 (2%)
Frame = -2
Query: 1009 GFCDVVAVFKPENENLSKVLDNTNR-ELIKPILDQAVKISRRRDFFHSDFLTPNILEDAL 833
G ++ K ++L K + + N E +K IL+ A + S RR+ HSDFLTP +L++++
Sbjct: 51 GIRQLIQAVKGNFDDLLKGVGDKNAIEEVKHILEMARRASSRREVLHSDFLTPPVLKESM 110
Query: 832 IALKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFL 653
+AL+ + DV+ V QGGYP+AERCRL++GHP+ ++S PD V+A S++GNF F P SHGDFL
Sbjct: 111 MALEKLADVKAVAQGGYPQAERCRLSVGHPEALTSDPDIVAALSITGNFGFQPCSHGDFL 170
Query: 652 GAVLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEY 473
G++L GI REKIGDI+LQ EKGAQ + VPEL D+L S+ KV NV V+C+ IPLLALEY
Sbjct: 171 GSILGTGIAREKIGDIILQGEKGAQFLVVPELADYLITSLEKVGNVSVSCTRIPLLALEY 230
Query: 472 QPPRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDI 293
+PPRT++ +++EASLRVDA+ASAGF++SRSKLV+LIS GDVRVNWT VTKNGTTL+TGDI
Sbjct: 231 EPPRTKSFKTIEASLRVDALASAGFKLSRSKLVNLISNGDVRVNWTTVTKNGTTLRTGDI 290
Query: 292 ISIR-----ELREIKTTKKGKYSIELIRYL 218
+S+ ++ EI +T+KGK+++ELI+YL
Sbjct: 291 VSVSGKGRIKIGEINSTRKGKFAVELIQYL 320
>ref|XP_006464765.1| PREDICTED: uncharacterized protein LOC102629495 isoform X1 [Citrus
sinensis]
Length = 322
Score = 316 bits (810), Expect = 1e-83
Identities = 154/270 (57%), Positives = 211/270 (78%), Gaps = 6/270 (2%)
Frame = -2
Query: 1009 GFCDVVAVFKPENENLSKVLDNTNR-ELIKPILDQAVKISRRRDFFHSDFLTPNILEDAL 833
G ++ K ++L K + + N E +K IL+ A + S RR+ HSDFLTP +L++++
Sbjct: 53 GIRQLIQAVKGNFDDLLKGVGDKNAIEEVKHILEMARRASSRREVLHSDFLTPPVLKESM 112
Query: 832 IALKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFL 653
+AL+ + DV+ V QGGYP+AERCRL++GHP+ ++S PD V+A S++GNF F P SHGDFL
Sbjct: 113 MALEKLADVKAVAQGGYPQAERCRLSVGHPEALTSDPDIVAALSITGNFGFQPCSHGDFL 172
Query: 652 GAVLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEY 473
G++L GI REKIGDI+LQ EKGAQ + VPEL D+L S+ KV NV V+C+ IPLLALEY
Sbjct: 173 GSILGTGIAREKIGDIILQGEKGAQFLVVPELADYLITSLEKVGNVSVSCTRIPLLALEY 232
Query: 472 QPPRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDI 293
+PPRT++ +++EASLRVDA+ASAGF++SRSKLV+LIS GDVRVNWT VTKNGTTL+TGDI
Sbjct: 233 EPPRTKSFKTIEASLRVDALASAGFKLSRSKLVNLISNGDVRVNWTTVTKNGTTLRTGDI 292
Query: 292 ISIR-----ELREIKTTKKGKYSIELIRYL 218
+S+ ++ EI +T+KGK+++ELI+YL
Sbjct: 293 VSVSGKGRIKIGEINSTRKGKFAVELIQYL 322
>ref|XP_006451831.1| hypothetical protein CICLE_v10008924mg [Citrus clementina]
gi|557555057|gb|ESR65071.1| hypothetical protein
CICLE_v10008924mg [Citrus clementina]
Length = 322
Score = 316 bits (810), Expect = 1e-83
Identities = 154/270 (57%), Positives = 212/270 (78%), Gaps = 6/270 (2%)
Frame = -2
Query: 1009 GFCDVVAVFKPENENLSKVLDNTNR-ELIKPILDQAVKISRRRDFFHSDFLTPNILEDAL 833
G ++ K ++L K + + N E +K IL+ A + S RR+ HSDFLTP +L++++
Sbjct: 53 GIRHLIQAVKGNFDDLLKGVGDKNAIEEVKHILEMARRASSRREVLHSDFLTPPVLKESM 112
Query: 832 IALKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFL 653
+AL+ + DV+ V QGGYP+AERCRL++GHP++++S PD V+A S++GNF F P SHGDFL
Sbjct: 113 MALEKLADVKAVAQGGYPQAERCRLSVGHPELLTSDPDIVAALSITGNFGFQPCSHGDFL 172
Query: 652 GAVLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEY 473
G++L GI REKIGDI+LQ EKGAQ + VPEL D+L S+ KV NV V+C+ IPLLALEY
Sbjct: 173 GSILGTGIAREKIGDIILQGEKGAQFLVVPELADYLITSLEKVGNVSVSCTRIPLLALEY 232
Query: 472 QPPRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDI 293
+PPRT++ +++EASLRVDA+ASAGF++SRSKLV+LIS GDVRVNWT VTKNGTTL+TGDI
Sbjct: 233 EPPRTKSFKTIEASLRVDALASAGFKLSRSKLVNLISNGDVRVNWTTVTKNGTTLRTGDI 292
Query: 292 ISIR-----ELREIKTTKKGKYSIELIRYL 218
+S+ ++ EI +T+KGK+++ELI+YL
Sbjct: 293 VSVSGKGRIKIGEINSTRKGKFAVELIQYL 322
>ref|XP_006392826.1| hypothetical protein EUTSA_v10011660mg [Eutrema salsugineum]
gi|557089404|gb|ESQ30112.1| hypothetical protein
EUTSA_v10011660mg [Eutrema salsugineum]
Length = 320
Score = 316 bits (810), Expect = 1e-83
Identities = 154/268 (57%), Positives = 207/268 (77%), Gaps = 6/268 (2%)
Frame = -2
Query: 1003 CDVVAVFKPENENLSK-VLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDALIA 827
C VV K + + L K V D + +K IL+ A + + RR+ H+DFLTP I+++++
Sbjct: 53 CHVVEAIKGDVDFLLKGVGDQAVAKEVKQILEMARRAASRREVLHTDFLTPPIVKESVSV 112
Query: 826 LKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGA 647
L V DV IV QGGYPEAERCR+++GHPDV+++ PD V+A S++GNF F P SHGDFLGA
Sbjct: 113 LAKVADVTIVAQGGYPEAERCRISVGHPDVLTNDPDIVAALSITGNFGFQPCSHGDFLGA 172
Query: 646 VLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQP 467
+L G+ R+K+GDIL+Q EKGAQ++ VPELVDF+ +++KV NV VTC+ IPLLALEY+P
Sbjct: 173 ILGTGVSRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSVTCTKIPLLALEYEP 232
Query: 466 PRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIIS 287
PRT + ++VEASLR+DA+ASAGF+ISRSKLV LIS GDVRVNW VTKNGTT+KTGD++S
Sbjct: 233 PRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSGDVRVNWATVTKNGTTVKTGDVVS 292
Query: 286 IR-----ELREIKTTKKGKYSIELIRYL 218
+ ++ EI TKKGK+S+++IR+L
Sbjct: 293 VSGKGRLKIGEINETKKGKFSVQIIRFL 320
>ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH [Vitis vinifera]
gi|302142996|emb|CBI20291.3| unnamed protein product
[Vitis vinifera]
Length = 321
Score = 314 bits (804), Expect = 5e-83
Identities = 152/270 (56%), Positives = 205/270 (75%), Gaps = 6/270 (2%)
Frame = -2
Query: 1009 GFCDVVAVFKPENENLSK-VLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDAL 833
G C + K + +L K V D + E +K IL+ A + S RR+ H+DFLTP +L++++
Sbjct: 52 GMCHLAQAMKGDANSLLKGVADRSTIEAVKHILEMAKRASARREVLHTDFLTPPVLKESM 111
Query: 832 IALKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFL 653
I L+ + D++ V QGGYP+AERCRL++GH +V+++ PD V+A ++GNF F SHGDFL
Sbjct: 112 IVLEKLADMKAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGFQSCSHGDFL 171
Query: 652 GAVLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEY 473
GA+L GI REK+GDI+LQ EKGAQ++ VPELVDFL S+ KV NV V+C+ +PLLALEY
Sbjct: 172 GAILGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEY 231
Query: 472 QPPRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDI 293
+ PRT +++E SLRVDA+ASAGF++SRSKLV LIS GDVRVNWT VTKNGTTLKTGD+
Sbjct: 232 EEPRTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDV 291
Query: 292 ISIR-----ELREIKTTKKGKYSIELIRYL 218
+S+ ++ EI +TKKGKY++ELIR+L
Sbjct: 292 VSVSGKGRLKIGEINSTKKGKYAVELIRFL 321
>ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabidopsis thaliana]
gi|16648939|gb|AAL24321.1| Unknown protein [Arabidopsis
thaliana] gi|24899783|gb|AAN65106.1| Unknown protein
[Arabidopsis thaliana] gi|27311617|gb|AAO00774.1|
Unknown protein [Arabidopsis thaliana]
gi|30984534|gb|AAP42730.1| At1g53120 [Arabidopsis
thaliana] gi|332194772|gb|AEE32893.1| RNA-binding S4
domain-containing protein [Arabidopsis thaliana]
Length = 320
Score = 312 bits (799), Expect = 2e-82
Identities = 152/254 (59%), Positives = 199/254 (78%), Gaps = 5/254 (1%)
Frame = -2
Query: 964 LSKVLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDALIALKNVPDVEIVVQGG 785
L V D + +K IL+ A + S +R+ H+DFLTP I+++++ L+ DV+IV QGG
Sbjct: 67 LKGVGDQAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVKIVAQGG 126
Query: 784 YPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGAVLSAGIKREKIGDI 605
YPEAERCR++IGHPDV++S PD V+A S++GNF F P SHGDFLGA+L GI REK+GDI
Sbjct: 127 YPEAERCRISIGHPDVLTSDPDIVAALSITGNFGFQPCSHGDFLGAILGTGISREKLGDI 186
Query: 604 LLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQPPRTRAIRSVEASLR 425
L+Q EKGAQ++ VPELVDF+ +++KV NV VTCS IPLLALEY+PPRT + ++VEASLR
Sbjct: 187 LIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNSFKTVEASLR 246
Query: 424 VDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIISIR-----ELREIKT 260
+DA+ASAGF+ISRSKLV LIS DVRVNW VTKNGT +KTGD++S+ ++ EI
Sbjct: 247 IDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRLKIGEINE 306
Query: 259 TKKGKYSIELIRYL 218
TKKGK+++E+IRYL
Sbjct: 307 TKKGKFAVEIIRYL 320
>emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]
Length = 269
Score = 311 bits (798), Expect = 3e-82
Identities = 151/268 (56%), Positives = 204/268 (76%), Gaps = 6/268 (2%)
Frame = -2
Query: 1003 CDVVAVFKPENENLSK-VLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDALIA 827
C + K + +L K V D + E +K IL+ A + S RR+ H+DFLTP +L++++I
Sbjct: 2 CHLAQAMKGDANSLLKGVADRSTIEAVKHILEMAKRASARREVLHTDFLTPPVLKESMIV 61
Query: 826 LKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGA 647
L+ + D++ V QGGYP+AERCRL++GH +V+++ PD V+A ++GNF F SHGDFLGA
Sbjct: 62 LEKLADMKAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGFQSCSHGDFLGA 121
Query: 646 VLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQP 467
+L GI REK+GDI+LQ EKGAQ++ VPELVDFL S+ KV NV V+C+ +PLLALEY+
Sbjct: 122 ILGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEYEE 181
Query: 466 PRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIIS 287
PRT +++E SLRVDA+ASAGF++SRSKLV LIS GDVRVNWT VTKNGTTLKTGD++S
Sbjct: 182 PRTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDVVS 241
Query: 286 IR-----ELREIKTTKKGKYSIELIRYL 218
+ ++ EI +TKKGKY++ELIR+L
Sbjct: 242 VSGKGRLKIGEINSTKKGKYAVELIRFL 269
>ref|XP_004969937.1| PREDICTED: uncharacterized protein LOC101766660 [Setaria italica]
Length = 307
Score = 311 bits (797), Expect = 3e-82
Identities = 151/264 (57%), Positives = 203/264 (76%), Gaps = 5/264 (1%)
Frame = -2
Query: 994 VAVFKPENENLSKVLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDALIALKNV 815
VA N + +D E ++ ILD A + S+ RD FH++FLTP I+++A++A++ +
Sbjct: 44 VAAAAARNSAMKGSVDRNAAEEVRNILDMAERASQLRDVFHTNFLTPPIIKEAMLAIEKL 103
Query: 814 PDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGAVLSA 635
D++ V QGGYP+AERCR+++GHPD ++S PD V+A S+SGNF P SHGDFLGA+L
Sbjct: 104 ADIKAVAQGGYPQAERCRISVGHPDSMTSNPDVVAALSISGNFRLEPCSHGDFLGAILGT 163
Query: 634 GIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQPPRTR 455
GI REK+GDILLQ E+GAQ++ PELVD+L ++ KV V V+C+ IPLLALEY+PPRT+
Sbjct: 164 GITREKVGDILLQGERGAQVLVDPELVDYLISTLEKVGKVGVSCTQIPLLALEYEPPRTK 223
Query: 454 AIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIISIR-- 281
+ ++VEASLRVDA+ASAGF+ISR+KL SLIS GDVRVNWT V KNG TLK+GDI+S+
Sbjct: 224 SSKTVEASLRVDALASAGFKISRTKLASLISAGDVRVNWTPVLKNGVTLKSGDIVSVSGM 283
Query: 280 ---ELREIKTTKKGKYSIELIRYL 218
++ EI TT+KGKY++ELIRYL
Sbjct: 284 GRLKIGEIVTTRKGKYAVELIRYL 307
>ref|XP_006305195.1| hypothetical protein CARUB_v10009559mg, partial [Capsella rubella]
gi|482573906|gb|EOA38093.1| hypothetical protein
CARUB_v10009559mg, partial [Capsella rubella]
Length = 356
Score = 310 bits (795), Expect = 6e-82
Identities = 155/268 (57%), Positives = 203/268 (75%), Gaps = 6/268 (2%)
Frame = -2
Query: 1003 CDVVAVFKPENENLSK-VLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDALIA 827
C V K + + L K V D + +K IL+ A + + RR+ H+DFLTP I+++++
Sbjct: 89 CHVAEAIKGDVDFLLKGVADQAVAKEVKQILEMARRAASRRELLHTDFLTPPIVKESVSL 148
Query: 826 LKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGA 647
L DV+IV QGGYPEAERCR++IGHPDV+ + PD V+A S++G F+F P SHGDFLGA
Sbjct: 149 LGKFADVKIVAQGGYPEAERCRISIGHPDVLINDPDIVAALSITGGFNFQPCSHGDFLGA 208
Query: 646 VLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQP 467
+L GI REK+GDIL+Q EKGAQ++ VPELVDF+ +++KV NV VTC+ IPLLALEY+P
Sbjct: 209 ILGTGISREKLGDILIQGEKGAQVLIVPELVDFVVSALDKVGNVGVTCTKIPLLALEYEP 268
Query: 466 PRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIIS 287
PRT + ++VEASLR+DA+ASAGF+ISRSKLV LIS DVRVNW VTKNGT +KTGDI+S
Sbjct: 269 PRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISNKDVRVNWATVTKNGTIVKTGDIVS 328
Query: 286 IR-----ELREIKTTKKGKYSIELIRYL 218
+ ++ EI TKKGK+S+E+IRYL
Sbjct: 329 VSGKGRLKIGEINETKKGKFSVEIIRYL 356
>ref|XP_002456351.1| hypothetical protein SORBIDRAFT_03g034470 [Sorghum bicolor]
gi|241928326|gb|EES01471.1| hypothetical protein
SORBIDRAFT_03g034470 [Sorghum bicolor]
Length = 304
Score = 310 bits (795), Expect = 6e-82
Identities = 148/268 (55%), Positives = 205/268 (76%), Gaps = 5/268 (1%)
Frame = -2
Query: 1006 FCDVVAVFKPENENLSKVLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDALIA 827
+ +AV + + +D + E ++ ILD A + S+RRD FH++FLTP I+++A++A
Sbjct: 37 YSTAIAVAAARDSAVKGSVDRNSAEEVRNILDMAQRASQRRDVFHTNFLTPPIVKEAMLA 96
Query: 826 LKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGA 647
++ + D++ V QGGYP+AERCR+++GHPD ++S PD V+A S+SGNF P SHGDFLGA
Sbjct: 97 VEKLADIKAVAQGGYPQAERCRISVGHPDFMTSNPDVVAALSISGNFRLEPCSHGDFLGA 156
Query: 646 VLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQP 467
+L GI REK+GDILLQ E+GAQ++ P LVD+L ++ KV V V+C+ IPLLALEY+P
Sbjct: 157 ILGTGITREKVGDILLQGERGAQVLVDPGLVDYLISTLEKVGKVGVSCTQIPLLALEYEP 216
Query: 466 PRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIIS 287
PRT + ++VE+SLRVDA+ASAGF+ISR+KL SLIS GDVRVNWT TKNG TLK+GD++S
Sbjct: 217 PRTNSFKTVESSLRVDALASAGFKISRTKLASLISSGDVRVNWTPTTKNGVTLKSGDVVS 276
Query: 286 IR-----ELREIKTTKKGKYSIELIRYL 218
+ ++ EI TT+KGKY++ELIRYL
Sbjct: 277 VSGMGRLKIGEIVTTRKGKYAVELIRYL 304
>gb|EMJ13796.1| hypothetical protein PRUPE_ppa016812mg, partial [Prunus persica]
Length = 319
Score = 310 bits (794), Expect = 7e-82
Identities = 147/270 (54%), Positives = 209/270 (77%), Gaps = 6/270 (2%)
Frame = -2
Query: 1009 GFCDVVAVFKPENENLSK-VLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDAL 833
G C + K ++++L K V+D T E +K +L+ A + S RR+ H++FLTP +L++++
Sbjct: 50 GICHLAQAVKRDDDDLLKGVVDKTVIEEVKHVLEMARRASLRREVLHTNFLTPPVLKESM 109
Query: 832 IALKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFL 653
+AL+ + D++ V QGGYP+AERCR+++GHP+ ++S PD + A S++GNF F P SHGDFL
Sbjct: 110 LALEKLADLKAVAQGGYPQAERCRISVGHPERLTSDPDVIVALSITGNFGFQPCSHGDFL 169
Query: 652 GAVLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEY 473
GA+L GI REK GD++ Q EKGAQ+I VP+L D+L S++KV NVPV+ + IPL+AL+Y
Sbjct: 170 GAILGTGIAREKFGDVIFQGEKGAQVIVVPDLADYLISSLDKVGNVPVSLTKIPLIALDY 229
Query: 472 QPPRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDI 293
+ PRT++ +++E SLR+DAIASAGF+ISRSKLV LI GDVR+NWT VTKNG TLKTGDI
Sbjct: 230 EQPRTKSFKAIELSLRIDAIASAGFKISRSKLVDLIRDGDVRLNWTPVTKNGATLKTGDI 289
Query: 292 ISIR-----ELREIKTTKKGKYSIELIRYL 218
+S+R ++ EI +TKKGK+++ELIRYL
Sbjct: 290 VSVRGKGRLKIGEINSTKKGKFAVELIRYL 319
>ref|XP_004296512.1| PREDICTED: putative RNA-binding protein YlmH-like [Fragaria vesca
subsp. vesca]
Length = 322
Score = 309 bits (792), Expect = 1e-81
Identities = 148/270 (54%), Positives = 207/270 (76%), Gaps = 6/270 (2%)
Frame = -2
Query: 1009 GFCDVVAVFKPE-NENLSKVLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDAL 833
G C + K + E L V D T E +K IL+ A + S RR+ H++FLTP ++++++
Sbjct: 53 GLCHLAQAVKGDVAELLKSVGDKTVIEEVKRILEMARRASSRREVLHTNFLTPPVIKESM 112
Query: 832 IALKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFL 653
+AL + D++ V QGGYP+AERCR+++GHP+V++S PD ++A S++GNF F P SHGDFL
Sbjct: 113 LALMKLADLKAVSQGGYPQAERCRISVGHPEVLTSDPDIIAALSITGNFGFQPCSHGDFL 172
Query: 652 GAVLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEY 473
G +L GI REK+GD++LQ EKGAQ+I VPEL+DFL S++KV NVPV+ + IPL++++Y
Sbjct: 173 GTILGTGIAREKVGDVILQGEKGAQVIIVPELIDFLMTSLDKVGNVPVSVTKIPLISIDY 232
Query: 472 QPPRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDI 293
+PP T++ +++EAS R+DAIASAGF+ISRSKLV LI GDVR+NWT VTKNG TLK GDI
Sbjct: 233 EPPSTKSFKTIEASARIDAIASAGFKISRSKLVDLIRDGDVRLNWTPVTKNGATLKAGDI 292
Query: 292 ISIR-----ELREIKTTKKGKYSIELIRYL 218
+S+R ++ EI TT+KGK++IELIRYL
Sbjct: 293 VSVRGKGRLKIGEINTTRKGKFAIELIRYL 322
>ref|XP_006451829.1| hypothetical protein CICLE_v10008924mg [Citrus clementina]
gi|557555055|gb|ESR65069.1| hypothetical protein
CICLE_v10008924mg [Citrus clementina]
Length = 236
Score = 308 bits (788), Expect = 4e-81
Identities = 145/235 (61%), Positives = 195/235 (82%), Gaps = 5/235 (2%)
Frame = -2
Query: 907 AVKISRRRDFFHSDFLTPNILEDALIALKNVPDVEIVVQGGYPEAERCRLAIGHPDVISS 728
A + S RR+ HSDFLTP +L+++++AL+ + DV+ V QGGYP+AERCRL++GHP++++S
Sbjct: 2 ARRASSRREVLHSDFLTPPVLKESMMALEKLADVKAVAQGGYPQAERCRLSVGHPELLTS 61
Query: 727 VPDAVSAFSVSGNFSFSPASHGDFLGAVLSAGIKREKIGDILLQSEKGAQIITVPELVDF 548
PD V+A S++GNF F P SHGDFLG++L GI REKIGDI+LQ EKGAQ + VPEL D+
Sbjct: 62 DPDIVAALSITGNFGFQPCSHGDFLGSILGTGIAREKIGDIILQGEKGAQFLVVPELADY 121
Query: 547 LAFSVNKVKNVPVTCSPIPLLALEYQPPRTRAIRSVEASLRVDAIASAGFQISRSKLVSL 368
L S+ KV NV V+C+ IPLLALEY+PPRT++ +++EASLRVDA+ASAGF++SRSKLV+L
Sbjct: 122 LITSLEKVGNVSVSCTRIPLLALEYEPPRTKSFKTIEASLRVDALASAGFKLSRSKLVNL 181
Query: 367 ISGGDVRVNWTEVTKNGTTLKTGDIISIR-----ELREIKTTKKGKYSIELIRYL 218
IS GDVRVNWT VTKNGTTL+TGDI+S+ ++ EI +T+KGK+++ELI+YL
Sbjct: 182 ISNGDVRVNWTTVTKNGTTLRTGDIVSVSGKGRIKIGEINSTRKGKFAVELIQYL 236
>gb|EEC71469.1| hypothetical protein OsI_03722 [Oryza sativa Indica Group]
Length = 305
Score = 306 bits (785), Expect = 8e-81
Identities = 144/250 (57%), Positives = 198/250 (79%), Gaps = 5/250 (2%)
Frame = -2
Query: 952 LDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDALIALKNVPDVEIVVQGGYPEA 773
LD E ++ ILD A + S+RRD FH++FLTP I+++ ++A++ + D++ V QGGYP+A
Sbjct: 56 LDRNAAEELRSILDMAQRASQRRDVFHTNFLTPPIVKECMLAIEKLADIKAVAQGGYPQA 115
Query: 772 ERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGAVLSAGIKREKIGDILLQS 593
ERCR+++GHPD ++S PD V+A S+SGNF P SHGDFLGA+L GI R+K+GDILLQ
Sbjct: 116 ERCRVSVGHPDCMTSNPDVVAALSISGNFRLEPCSHGDFLGAILGTGITRDKVGDILLQG 175
Query: 592 EKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQPPRTRAIRSVEASLRVDAI 413
E+GAQ++ PELVD+L ++ KV V V+C+ IPLLALEY+PPRT++ ++VE+SLRVDA+
Sbjct: 176 ERGAQVLVDPELVDYLTSTLEKVGKVGVSCTQIPLLALEYEPPRTKSFKTVESSLRVDAL 235
Query: 412 ASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIISIR-----ELREIKTTKKG 248
SAGF+ISR+KL SLIS GDVRVNW+ V+KNG TLK GD++S+ ++ EI TT+KG
Sbjct: 236 GSAGFKISRTKLASLISAGDVRVNWSPVSKNGVTLKAGDVVSVSGMGRLKIGEIVTTRKG 295
Query: 247 KYSIELIRYL 218
KY++ELIRYL
Sbjct: 296 KYAVELIRYL 305
>ref|NP_001044235.2| Os01g0747700 [Oryza sativa Japonica Group]
gi|57899502|dbj|BAD86964.1| S4 domain protein-like
[Oryza sativa Japonica Group]
gi|255673682|dbj|BAF06149.2| Os01g0747700 [Oryza sativa
Japonica Group]
Length = 305
Score = 306 bits (785), Expect = 8e-81
Identities = 144/250 (57%), Positives = 198/250 (79%), Gaps = 5/250 (2%)
Frame = -2
Query: 952 LDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDALIALKNVPDVEIVVQGGYPEA 773
LD E ++ ILD A + S+RRD FH++FLTP I+++ ++A++ + D++ V QGGYP+A
Sbjct: 56 LDRNAAEELRSILDMAQRASQRRDVFHTNFLTPPIVKECMLAIEKLADIKAVAQGGYPQA 115
Query: 772 ERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGAVLSAGIKREKIGDILLQS 593
ERCR+++GHPD ++S PD V+A S+SGNF P SHGDFLGA+L GI R+K+GDILLQ
Sbjct: 116 ERCRVSVGHPDCMTSNPDVVAALSISGNFRLEPCSHGDFLGAILGTGITRDKVGDILLQG 175
Query: 592 EKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQPPRTRAIRSVEASLRVDAI 413
E+GAQ++ PELVD+L ++ KV V V+C+ IPLLALEY+PPRT++ ++VE+SLRVDA+
Sbjct: 176 ERGAQVLVDPELVDYLTSTLEKVGKVGVSCTQIPLLALEYEPPRTKSFKTVESSLRVDAL 235
Query: 412 ASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIISIR-----ELREIKTTKKG 248
SAGF+ISR+KL SLIS GDVRVNW+ V+KNG TLK GD++S+ ++ EI TT+KG
Sbjct: 236 GSAGFKISRTKLASLISAGDVRVNWSPVSKNGVTLKAGDVVSVSGMGRLKIGEIVTTRKG 295
Query: 247 KYSIELIRYL 218
KY++ELIRYL
Sbjct: 296 KYAVELIRYL 305
>ref|NP_001130102.1| uncharacterized protein LOC100191195 [Zea mays]
gi|194688290|gb|ACF78229.1| unknown [Zea mays]
gi|223975061|gb|ACN31718.1| unknown [Zea mays]
gi|414880496|tpg|DAA57627.1| TPA: RNA-binding S4 isoform
1 [Zea mays] gi|414880497|tpg|DAA57628.1| TPA:
RNA-binding S4 isoform 2 [Zea mays]
gi|414880498|tpg|DAA57629.1| TPA: RNA-binding S4 isoform
3 [Zea mays]
Length = 304
Score = 306 bits (784), Expect = 1e-80
Identities = 148/268 (55%), Positives = 204/268 (76%), Gaps = 5/268 (1%)
Frame = -2
Query: 1006 FCDVVAVFKPENENLSKVLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDALIA 827
+ +AV + + +D + E ++ IL+ A + S+RR+ FH++FLTP I+++A++A
Sbjct: 37 YSTAIAVAAARDLAVKGSVDRNSAEEVRNILNMAERASQRRNVFHTNFLTPPIVKEAMLA 96
Query: 826 LKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGA 647
L+ D + V QGGYP+AERCR+++GHPDV++S PD V+A S+SGNF SHGDFLGA
Sbjct: 97 LEKFADTKAVAQGGYPQAERCRISVGHPDVMTSNPDVVAALSISGNFRLESCSHGDFLGA 156
Query: 646 VLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQP 467
+L GI REK+GDILLQ E+GAQ++ PELVD+L ++ KV V V+C+ IPLLALEY+P
Sbjct: 157 ILGTGITREKVGDILLQGERGAQVLVDPELVDYLISTLEKVGKVGVSCTQIPLLALEYEP 216
Query: 466 PRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIIS 287
PRT + ++VE+SLRVDA+ASAGF+ISR+KL SLIS GDVRVNWT TKNG TLK+GD++S
Sbjct: 217 PRTNSFKTVESSLRVDALASAGFKISRTKLASLISSGDVRVNWTPTTKNGVTLKSGDVVS 276
Query: 286 IR-----ELREIKTTKKGKYSIELIRYL 218
+ ++ EI TT+KGKY++ELIRYL
Sbjct: 277 VSGMGRLKIGEIVTTRKGKYAVELIRYL 304
>gb|ESW32024.1| hypothetical protein PHAVU_002G286700g [Phaseolus vulgaris]
Length = 323
Score = 306 bits (783), Expect = 1e-80
Identities = 144/248 (58%), Positives = 201/248 (81%), Gaps = 5/248 (2%)
Frame = -2
Query: 946 NTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDALIALKNVPDVEIVVQGGYPEAER 767
N +E +K IL+ A + S +R+ H+DFLTP +L+++++ L+ + DV+ + QGGYP+AER
Sbjct: 77 NVTKE-VKHILEMARRASLKRETLHTDFLTPPVLKESMLVLEKLADVKAISQGGYPQAER 135
Query: 766 CRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGAVLSAGIKREKIGDILLQSEK 587
CR+++GHP+ ++S PD +SA S+ GNF F P SHGDFLG++L GI REK+GDI+LQ E+
Sbjct: 136 CRISVGHPEELTSDPDVISALSIKGNFQFEPCSHGDFLGSILGTGIVREKLGDIILQGEQ 195
Query: 586 GAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQPPRTRAIRSVEASLRVDAIAS 407
GAQII VPELV+FL ++ KV+NVPVTC+ IPL++L+Y+PPRT++ +++EASLRVDA+AS
Sbjct: 196 GAQIIVVPELVEFLMSTLVKVRNVPVTCTKIPLISLDYEPPRTKSFKTIEASLRVDALAS 255
Query: 406 AGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIISIR-----ELREIKTTKKGKY 242
AGF+ISRSKLV++IS GDVRVNW VT GTTLK+GDIIS+ ++ EI +TKKGK+
Sbjct: 256 AGFKISRSKLVNMISNGDVRVNWNPVTTKGTTLKSGDIISVSGKGRLKIGEINSTKKGKF 315
Query: 241 SIELIRYL 218
++ELIRYL
Sbjct: 316 AVELIRYL 323
>gb|ACG39001.1| RNA-binding S4 [Zea mays]
Length = 304
Score = 305 bits (780), Expect = 3e-80
Identities = 147/268 (54%), Positives = 202/268 (75%), Gaps = 5/268 (1%)
Frame = -2
Query: 1006 FCDVVAVFKPENENLSKVLDNTNRELIKPILDQAVKISRRRDFFHSDFLTPNILEDALIA 827
+ +AV + + +D + E ++ IL+ A + S+RRD FH++FLTP I+++ ++A
Sbjct: 37 YSTAIAVAAARDSAVKGSVDRNSAEEVRNILNMAERASQRRDVFHTNFLTPPIVKETMLA 96
Query: 826 LKNVPDVEIVVQGGYPEAERCRLAIGHPDVISSVPDAVSAFSVSGNFSFSPASHGDFLGA 647
L+ D + V QGGYP+AERCR+++GHPDV++S PD V+A S+SGNF SHGDFLGA
Sbjct: 97 LEKFADTKAVAQGGYPQAERCRISVGHPDVMTSNPDVVAALSISGNFRLESCSHGDFLGA 156
Query: 646 VLSAGIKREKIGDILLQSEKGAQIITVPELVDFLAFSVNKVKNVPVTCSPIPLLALEYQP 467
+L GI REK+GDILLQ E+GAQ++ PELVD+L ++ KV V V+C+ IPLLALEY+P
Sbjct: 157 ILGTGITREKVGDILLQGERGAQVLVDPELVDYLISTLEKVGKVGVSCTQIPLLALEYEP 216
Query: 466 PRTRAIRSVEASLRVDAIASAGFQISRSKLVSLISGGDVRVNWTEVTKNGTTLKTGDIIS 287
PRT + ++VE+SLRVDA+ASAGF+ISR+KL SLIS GDVRVNWT TKNG TLK+ D++S
Sbjct: 217 PRTNSFKTVESSLRVDALASAGFKISRTKLASLISSGDVRVNWTPTTKNGVTLKSRDVVS 276
Query: 286 IR-----ELREIKTTKKGKYSIELIRYL 218
+ ++ EI TT+KGKY++ELIRYL
Sbjct: 277 VSGMGRLKIGEIVTTRKGKYAVELIRYL 304