BLASTX nr result

ID: Ephedra28_contig00001517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00001517
         (855 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77014.1| unknown [Picea sitchensis]                              62   3e-07
ref|XP_006844055.1| hypothetical protein AMTR_s00006p00245940 [A...    59   2e-06

>gb|ADE77014.1| unknown [Picea sitchensis]
          Length = 425

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = +3

Query: 234 KLPKSISHFTQLQTLILGNSHVEDYGDLGLERLPCLAYLSISGG-KCEEFPESFGKAGAF 410
           K+P  I  F QL  LIL +    +   +GLE+L  L  L I G    +E P+++GK GAF
Sbjct: 241 KIPSWICGFQQLSCLILKSCDKLEEIPVGLEKLEWLRRLDIIGSWTLKELPDAYGKDGAF 300

Query: 411 PRLVELQLYEFPSLKKMPSIEEGGMPCLKSAGLDKCPNLR 530
           PRL    L +   ++  P I  G MP LK  GL  C N++
Sbjct: 301 PRLESFWLDQTRVVEVFPPISPGAMPLLKKLGLVFCLNVK 340


>ref|XP_006844055.1| hypothetical protein AMTR_s00006p00245940 [Amborella trichopoda]
           gi|548846454|gb|ERN05730.1| hypothetical protein
           AMTR_s00006p00245940 [Amborella trichopoda]
          Length = 672

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 53/148 (35%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
 Frame = +3

Query: 99  NALSALKKLRRLTLYNVSEGAAV-----LELDDNMPELLKDLHYLSIGSFKLPKSISHFT 263
           N+LS L+ L  LTL  +++G  +     LE     P LL+ L  LS    KLP       
Sbjct: 450 NSLSNLQCLPSLTL--LAKGDTIQTRHNLEAVLQPPALLEKLQ-LSGKLEKLPSWFGTLR 506

Query: 264 QLQTLILGNSHVEDYGDLGLERLPCLAYLSISGGKCEEFPESFGKAGAFPRLVELQLYEF 443
            L  LIL +S + + G   L+ LP L  L +        P     AG FP+L E  L   
Sbjct: 507 NLTKLILLSSKLNEEGFYELQELPRLRILKLYAYVGNGMP---CMAGGFPQLREFVLENL 563

Query: 444 PSLKKMPSIEEGGMPCLKSAGLDKCPNL 527
             L++  S+EEG MPCL+S  + KCP L
Sbjct: 564 YELEEWKSLEEGSMPCLESLDIIKCPKL 591


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