BLASTX nr result
ID: Ephedra28_contig00001457
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00001457
(360 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEW08827.1| hypothetical protein CL1852Contig1_01, partial [P... 75 7e-12
ref|XP_001761821.1| predicted protein [Physcomitrella patens] gi... 75 9e-12
gb|AEW08826.1| hypothetical protein CL1852Contig1_01, partial [P... 74 2e-11
ref|XP_001779388.1| predicted protein [Physcomitrella patens] gi... 72 6e-11
ref|XP_001770548.1| predicted protein [Physcomitrella patens] gi... 72 8e-11
ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 71 2e-10
emb|CBI29360.3| unnamed protein product [Vitis vinifera] 71 2e-10
ref|XP_001780529.1| predicted protein [Physcomitrella patens] gi... 69 7e-10
ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 3-l... 69 8e-10
ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [A... 67 2e-09
gb|EMJ02395.1| hypothetical protein PRUPE_ppa002584mg [Prunus pe... 65 1e-08
ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-l... 64 2e-08
ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-l... 64 2e-08
ref|XP_004253267.1| PREDICTED: polyadenylate-binding protein 5-l... 62 1e-07
ref|XP_004292506.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 61 2e-07
gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum] 59 7e-07
dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum] 59 7e-07
ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula... 59 7e-07
ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [... 58 1e-06
ref|XP_006359024.1| PREDICTED: polyadenylate-binding protein 3-l... 57 2e-06
>gb|AEW08827.1| hypothetical protein CL1852Contig1_01, partial [Pinus lambertiana]
Length = 72
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = +3
Query: 132 NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASRDQQR 308
N RNGPDP+ + Q +M MM P D+AG N++ R + V I LAS LASA+++QQR
Sbjct: 2 NTRNGPDPSLVPQALMGTMMPMPLDVAGMPVGNAETTRPQPVPITALASALASANQEQQR 61
Query: 309 AMLGEQLFPLI 341
AMLGEQLFPL+
Sbjct: 62 AMLGEQLFPLV 72
>ref|XP_001761821.1| predicted protein [Physcomitrella patens]
gi|162686876|gb|EDQ73262.1| predicted protein
[Physcomitrella patens]
Length = 153
Score = 75.1 bits (183), Expect = 9e-12
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = +3
Query: 120 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVG--RTRVSIETLASDLASAS 293
R PN RN PD + QG++ M+ P +I GA AAN D G + + I LAS LASA
Sbjct: 11 RYIPNARNTPDVSVPPQGIINTMLPVPLEIGGAPAANVDPGVPQQPLPISALASALASAP 70
Query: 294 RDQQRAMLGEQLFPLIAQLE 353
DQQRAMLGEQL+PL+ QLE
Sbjct: 71 PDQQRAMLGEQLYPLVDQLE 90
>gb|AEW08826.1| hypothetical protein CL1852Contig1_01, partial [Pinus radiata]
gi|383132430|gb|AFG47081.1| hypothetical protein
CL1852Contig1_01, partial [Pinus taeda]
gi|383132432|gb|AFG47082.1| hypothetical protein
CL1852Contig1_01, partial [Pinus taeda]
gi|383132434|gb|AFG47083.1| hypothetical protein
CL1852Contig1_01, partial [Pinus taeda]
gi|383132436|gb|AFG47084.1| hypothetical protein
CL1852Contig1_01, partial [Pinus taeda]
Length = 72
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 132 NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASRDQQR 308
N RNGPDP+ + Q +M MM P D+AG N++ R + V I LAS LASA+ +QQR
Sbjct: 2 NTRNGPDPSLVPQALMGTMMPMPLDVAGMPVGNAETTRPQPVPITALASALASANPEQQR 61
Query: 309 AMLGEQLFPLI 341
AMLGEQLFPL+
Sbjct: 62 AMLGEQLFPLV 72
>ref|XP_001779388.1| predicted protein [Physcomitrella patens]
gi|162669186|gb|EDQ55778.1| predicted protein
[Physcomitrella patens]
Length = 650
Score = 72.4 bits (176), Expect = 6e-11
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +3
Query: 120 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVG--RTRVSIETLASDLASAS 293
R PN RN PD QG+M AM+ P +I G AN D G + + I LAS LASA
Sbjct: 508 RYTPNARNMPDTAVPPQGIMGAMVPVPLEIGGLPVANVDSGVPQQPLPISALASALASAP 567
Query: 294 RDQQRAMLGEQLFPLIAQLE 353
+QQRAMLGEQL+PL+ QLE
Sbjct: 568 PEQQRAMLGEQLYPLVDQLE 587
>ref|XP_001770548.1| predicted protein [Physcomitrella patens]
gi|162678256|gb|EDQ64717.1| predicted protein
[Physcomitrella patens]
Length = 645
Score = 72.0 bits (175), Expect = 8e-11
Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +3
Query: 120 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVG--RTRVSIETLASDLASAS 293
R N RN PD QG+M AM+ P +I G AN+D G + + I LAS LASA
Sbjct: 503 RYTTNARNTPDVAVPPQGIMGAMLPVPIEIGGVPVANADAGVPQQPLPISALASALASAP 562
Query: 294 RDQQRAMLGEQLFPLIAQLE 353
+QQRAMLGEQL+PL+ QLE
Sbjct: 563 PEQQRAMLGEQLYPLVDQLE 582
>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 120 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASR 296
R N RNG DP+ + QG+M +M P D++G + D+ RT V + TLAS LAS +
Sbjct: 955 RYMANGRNGVDPSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRTGPVPMSTLASALASTTP 1014
Query: 297 DQQRAMLGEQLFPLIAQLEPE 359
D QR MLGEQLFPL+ ++E E
Sbjct: 1015 DNQRLMLGEQLFPLVERIERE 1035
>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 120 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASR 296
R N RNG DP+ + QG+M +M P D++G + D+ RT V + TLAS LAS +
Sbjct: 495 RYMANGRNGVDPSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRTGPVPMSTLASALASTTP 554
Query: 297 DQQRAMLGEQLFPLIAQLEPE 359
D QR MLGEQLFPL+ ++E E
Sbjct: 555 DNQRLMLGEQLFPLVERIERE 575
>ref|XP_001780529.1| predicted protein [Physcomitrella patens]
gi|162668007|gb|EDQ54623.1| predicted protein
[Physcomitrella patens]
Length = 647
Score = 68.9 bits (167), Expect = 7e-10
Identities = 43/83 (51%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +3
Query: 120 RMPPNMRNGPDPNFMS-QGVMPAMMSGPSDIAGAQAANSDVG--RTRVSIETLASDLASA 290
R PN+RN D QG+M M+ P +I G AAN D G + + I LAS LASA
Sbjct: 504 RYTPNVRNASDGTAPPPQGMMGVMLPVPLEIGGMPAANVDSGVPQQPLPISALASALASA 563
Query: 291 SRDQQRAMLGEQLFPLIAQLEPE 359
DQQRAMLGEQL+PL+ QLE E
Sbjct: 564 PPDQQRAMLGEQLYPLVDQLEHE 586
>ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 3-like isoform 1 [Glycine
max]
Length = 652
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/79 (48%), Positives = 48/79 (60%)
Frame = +3
Query: 120 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASASRD 299
R PN RNG DP+ + G+M MM P D +G AA +D R TLAS LASA+ +
Sbjct: 515 RYMPNGRNGMDPSLVPHGLMGPMMPMPFDGSGVTAAPNDNQRPGALSTTLASALASATPE 574
Query: 300 QQRAMLGEQLFPLIAQLEP 356
QR MLGE L+PL+ +L P
Sbjct: 575 NQRMMLGEHLYPLVERLAP 593
>ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [Amborella trichopoda]
gi|548844219|gb|ERN03845.1| hypothetical protein
AMTR_s00078p00149860 [Amborella trichopoda]
Length = 645
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 132 NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASRDQQR 308
N RNG DP + QG+M M+ P D+ G + + R + V I TLAS LASA+ +QQR
Sbjct: 509 NARNGLDPTMVPQGLMSPMLPLPLDVPGMVMSPMEAPRPQPVPIGTLASALASATPEQQR 568
Query: 309 AMLGEQLFPLIAQLE 353
MLGEQLFPL+ ++E
Sbjct: 569 VMLGEQLFPLVDRME 583
>gb|EMJ02395.1| hypothetical protein PRUPE_ppa002584mg [Prunus persica]
Length = 655
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +3
Query: 132 NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASRDQQR 308
N RNG DP+ QG++ +M P D +G +D R+ + + TLAS LASA+ + QR
Sbjct: 521 NARNGVDPSVTPQGIVGPIMPLPFDGSGMPVTPNDSQRSGPLPMSTLASALASATPENQR 580
Query: 309 AMLGEQLFPLIAQLEPE 359
MLGEQL+PL+ ++EPE
Sbjct: 581 LMLGEQLYPLVERIEPE 597
>ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +3
Query: 132 NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASRDQQR 308
N RNG + + QG++ MM D +G + +D+ R+R V TLAS LASAS + QR
Sbjct: 518 NARNGLESPVLPQGLVSPMMPLAFDGSGVSSPPNDIQRSRAVPTSTLASALASASLENQR 577
Query: 309 AMLGEQLFPLIAQLEP 356
MLGEQL+PL+ +LEP
Sbjct: 578 VMLGEQLYPLVERLEP 593
>ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +3
Query: 132 NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASRDQQR 308
N RNG + + QG++ MM D +G + +D+ R+R V TLAS LASAS + QR
Sbjct: 518 NARNGLETPVLPQGLVSPMMPLAFDGSGVSSPPNDIQRSRAVPTSTLASALASASLENQR 577
Query: 309 AMLGEQLFPLIAQLEP 356
MLGEQL+PL+ +LEP
Sbjct: 578 VMLGEQLYPLVERLEP 593
>ref|XP_004253267.1| PREDICTED: polyadenylate-binding protein 5-like [Solanum
lycopersicum]
Length = 649
Score = 61.6 bits (148), Expect = 1e-07
Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +3
Query: 120 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANS-DVGRTR-VSIETLASDLASAS 293
R PN RNG P+ +SQG+M ++M P D + A A D+ R+ V TLAS LA AS
Sbjct: 513 RFNPNGRNGMYPS-ISQGMMGSIMQAPFDASSAMTAPPLDIQRSNPVPPSTLASSLAFAS 571
Query: 294 RDQQRAMLGEQLFPLIAQLE 353
+ Q AMLGEQLFPL+ +E
Sbjct: 572 PEDQHAMLGEQLFPLVEHIE 591
>ref|XP_004292506.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
5-like [Fragaria vesca subsp. vesca]
Length = 635
Score = 60.8 bits (146), Expect = 2e-07
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +3
Query: 138 RNGPDPNFMSQGVMPAMMSGPSDIAGAQAA-NSDVGRTR-VSIETLASDLASASRDQQRA 311
RNG D QG++ +M P D +G A +SD+ RT + + TLAS LASA+ + QR
Sbjct: 503 RNGVDSAVSPQGLVSPVMPLPFDGSGMPAVTSSDIQRTGPMPMSTLASALASATPENQRL 562
Query: 312 MLGEQLFPLIAQLEPE 359
MLGEQL+PL+ ++EPE
Sbjct: 563 MLGEQLYPLVERIEPE 578
>gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = +3
Query: 120 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASASRD 299
R PP RNGP+ GV M+S P D+ G +S +G+ + I TLAS LA+A +
Sbjct: 342 RYPPG-RNGPEGPM--PGVPGGMLSVPYDMGGMLPRDSAMGQP-MPISTLASALANAPPE 397
Query: 300 QQRAMLGEQLFPLIAQLEPE 359
QQR MLGE L+PL+ QLE E
Sbjct: 398 QQRTMLGESLYPLVDQLEHE 417
>dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = +3
Query: 120 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASASRD 299
R PP RNGP+ GV M+S P D+ G +S +G+ + I TLAS LA+A +
Sbjct: 520 RYPPG-RNGPEGPM--PGVPGGMLSVPYDMGGMLPRDSAMGQP-MPISTLASALANAPPE 575
Query: 300 QQRAMLGEQLFPLIAQLEPE 359
QQR MLGE L+PL+ QLE E
Sbjct: 576 QQRTMLGESLYPLVDQLEHE 595
>ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein
[Medicago truncatula]
Length = 654
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 120 RMPPN--MRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASAS 293
R PP M +GP P GV M S P D+ G ++ + + ++ I LAS LA+AS
Sbjct: 515 RYPPGRGMPDGPMP-----GVAGGMYSVPYDVGGMPIRDASLSQ-QIPIGALASHLANAS 568
Query: 294 RDQQRAMLGEQLFPLIAQLEPE 359
+QQR MLGE L+PL+ QLEP+
Sbjct: 569 PEQQRTMLGENLYPLVEQLEPD 590
>ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein
VITISV_017035 [Vitis vinifera]
Length = 640
Score = 57.8 bits (138), Expect = 1e-06
Identities = 37/80 (46%), Positives = 48/80 (60%)
Frame = +3
Query: 120 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASASRD 299
R PP RN PD GV M+S P D+ G ++ +G+ + I LAS LA+A+ D
Sbjct: 501 RYPPG-RNMPDVPM--PGVAGGMLSIPYDMGGVPLRDAAIGQP-MPISALASALANATPD 556
Query: 300 QQRAMLGEQLFPLIAQLEPE 359
QQR MLGE L+PL+ QLE E
Sbjct: 557 QQRTMLGESLYPLVDQLEHE 576
>ref|XP_006359024.1| PREDICTED: polyadenylate-binding protein 3-like [Solanum tuberosum]
Length = 648
Score = 57.4 bits (137), Expect = 2e-06
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +3
Query: 129 PNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANS-DVGRTR-VSIETLASDLASASRDQ 302
PN RNG P+ + QG+M ++M P D + A D+ R+ V TLAS LA AS +
Sbjct: 515 PNGRNGMHPS-IPQGMMGSIMRAPFDASSAMTTPPLDIQRSNPVPPSTLASSLAFASPED 573
Query: 303 QRAMLGEQLFPLIAQLE 353
Q AMLGEQLFPL+ +E
Sbjct: 574 QHAMLGEQLFPLVEHIE 590