BLASTX nr result
ID: Ephedra28_contig00001381
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00001381
(869 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACN40787.1| unknown [Picea sitchensis] 179 1e-42
ref|XP_002509740.1| cleavage and polyadenylation specificity fac... 151 3e-34
ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 150 8e-34
ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 150 8e-34
ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 150 8e-34
emb|CBI34726.3| unnamed protein product [Vitis vinifera] 150 8e-34
ref|XP_006590532.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 148 2e-33
ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 148 2e-33
gb|ESW30463.1| hypothetical protein PHAVU_002G155000g [Phaseolus... 145 1e-32
ref|XP_004515807.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 145 2e-32
ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago trunca... 145 2e-32
ref|XP_004511598.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 144 3e-32
ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 144 5e-32
ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 143 7e-32
ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 143 7e-32
ref|XP_004976528.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 143 9e-32
ref|XP_004298760.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 143 9e-32
gb|EOY24646.1| Zinc finger, C3HC4 type (RING finger) family prot... 142 1e-31
gb|EOY24645.1| Zinc finger, C3HC4 type (RING finger) family prot... 142 1e-31
gb|ESW27548.1| hypothetical protein PHAVU_003G211600g [Phaseolus... 142 2e-31
>gb|ACN40787.1| unknown [Picea sitchensis]
Length = 397
Score = 179 bits (454), Expect = 1e-42
Identities = 79/86 (91%), Positives = 82/86 (95%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
GEKSGPFGG+MNLC+G+SS ER LSAEDAECCICLS YDDGVELRELPC HHFHCTCIDK
Sbjct: 312 GEKSGPFGGIMNLCTGESSTERVLSAEDAECCICLSTYDDGVELRELPCSHHFHCTCIDK 371
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WLRINATCPLCKYNIIKSSNNAREEV
Sbjct: 372 WLRINATCPLCKYNIIKSSNNAREEV 397
>ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223549639|gb|EEF51127.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 383
Score = 151 bits (382), Expect = 3e-34
Identities = 66/86 (76%), Positives = 71/86 (82%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G++ GP GGVM C DS E LS EDAECCICLSAYDDGVELRELPCGHHFHC C+DK
Sbjct: 298 GDEQGPLGGVMTECGTDSPVEHILSEEDAECCICLSAYDDGVELRELPCGHHFHCACVDK 357
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KSS+ REEV
Sbjct: 358 WLYINATCPLCKYNILKSSSRDREEV 383
>ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Vitis vinifera]
Length = 392
Score = 150 bits (378), Expect = 8e-34
Identities = 65/86 (75%), Positives = 71/86 (82%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G+ G GG+M C D+ E LS EDAECCICLSAYDDGVELRELPCGHHFHCTC+DK
Sbjct: 307 GDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDK 366
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KSS+N REEV
Sbjct: 367 WLYINATCPLCKYNILKSSSNGREEV 392
>ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 383
Score = 150 bits (378), Expect = 8e-34
Identities = 65/86 (75%), Positives = 71/86 (82%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G+ G GG+M C D+ E LS EDAECCICLSAYDDGVELRELPCGHHFHCTC+DK
Sbjct: 298 GDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDK 357
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KSS+N REEV
Sbjct: 358 WLYINATCPLCKYNILKSSSNGREEV 383
>ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 372
Score = 150 bits (378), Expect = 8e-34
Identities = 65/86 (75%), Positives = 71/86 (82%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G+ G GG+M C D+ E LS EDAECCICLSAYDDGVELRELPCGHHFHCTC+DK
Sbjct: 287 GDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDK 346
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KSS+N REEV
Sbjct: 347 WLYINATCPLCKYNILKSSSNGREEV 372
>emb|CBI34726.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 150 bits (378), Expect = 8e-34
Identities = 65/86 (75%), Positives = 71/86 (82%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G+ G GG+M C D+ E LS EDAECCICLSAYDDGVELRELPCGHHFHCTC+DK
Sbjct: 184 GDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDK 243
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KSS+N REEV
Sbjct: 244 WLYINATCPLCKYNILKSSSNGREEV 269
>ref|XP_006590532.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X2
[Glycine max]
Length = 388
Score = 148 bits (374), Expect = 2e-33
Identities = 64/86 (74%), Positives = 71/86 (82%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G GP GG+M C DS E AL+ EDAECCICLS+YDDGVELRELPCGHHFHC C+DK
Sbjct: 303 GTIQGPVGGIMTECQADSPIEHALAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDK 362
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KSSN ++EEV
Sbjct: 363 WLYINATCPLCKYNILKSSNLSQEEV 388
>ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X1
[Glycine max]
Length = 387
Score = 148 bits (374), Expect = 2e-33
Identities = 64/86 (74%), Positives = 71/86 (82%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G GP GG+M C DS E AL+ EDAECCICLS+YDDGVELRELPCGHHFHC C+DK
Sbjct: 302 GTIQGPVGGIMTECQADSPIEHALAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDK 361
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KSSN ++EEV
Sbjct: 362 WLYINATCPLCKYNILKSSNLSQEEV 387
>gb|ESW30463.1| hypothetical protein PHAVU_002G155000g [Phaseolus vulgaris]
Length = 390
Score = 145 bits (367), Expect = 1e-32
Identities = 63/86 (73%), Positives = 70/86 (81%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G GP GGVM C +S E L+ EDAECCICLS+YDDGVELRELPCGHHFHC C+DK
Sbjct: 305 GTIQGPVGGVMTECQAESPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDK 364
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KSSN ++EEV
Sbjct: 365 WLYINATCPLCKYNILKSSNISQEEV 390
>ref|XP_004515807.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cicer
arietinum]
Length = 379
Score = 145 bits (366), Expect = 2e-32
Identities = 61/86 (70%), Positives = 69/86 (80%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G GP GG+M C DS E L+ EDAECCICLSAYDDGVELR+LPCGHHFHC C+DK
Sbjct: 294 GNTQGPIGGIMTECQADSPIEHVLADEDAECCICLSAYDDGVELRQLPCGHHFHCACVDK 353
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KS+ + +EEV
Sbjct: 354 WLHINATCPLCKYNILKSTIHGQEEV 379
>ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase
[Medicago truncatula] gi|388506770|gb|AFK41451.1|
unknown [Medicago truncatula]
Length = 387
Score = 145 bits (366), Expect = 2e-32
Identities = 62/82 (75%), Positives = 68/82 (82%)
Frame = -1
Query: 857 GPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDKWLRI 678
GP GG+M C DS E L+ EDAECCICLS+YDDGVELRELPCGHHFHC C+DKWL I
Sbjct: 306 GPVGGIMTECRADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACVDKWLYI 365
Query: 677 NATCPLCKYNIIKSSNNAREEV 612
NATCPLCKYNI+KSSN +EEV
Sbjct: 366 NATCPLCKYNILKSSNLGQEEV 387
>ref|XP_004511598.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cicer
arietinum]
Length = 393
Score = 144 bits (364), Expect = 3e-32
Identities = 62/86 (72%), Positives = 68/86 (79%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G GP GG+M C DS E L+ EDAECCICL +YDDGVELRELPCGHHFHC C+DK
Sbjct: 308 GNIQGPVGGIMTECRADSPIEHVLAEEDAECCICLCSYDDGVELRELPCGHHFHCACVDK 367
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KSSN +EEV
Sbjct: 368 WLYINATCPLCKYNILKSSNLGQEEV 393
>ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
sativus]
Length = 383
Score = 144 bits (362), Expect = 5e-32
Identities = 63/81 (77%), Positives = 69/81 (85%)
Frame = -1
Query: 854 PFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDKWLRIN 675
P GGVM+ C DS ER L EDAECCICLSAY+DGVELRELPCGHHFHC C+DKWL IN
Sbjct: 303 PLGGVMSECCTDSPIERPLLQEDAECCICLSAYEDGVELRELPCGHHFHCACVDKWLYIN 362
Query: 674 ATCPLCKYNIIKSSNNAREEV 612
ATCPLCKYNI+K+SN A+EEV
Sbjct: 363 ATCPLCKYNILKNSNLAQEEV 383
>ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 380
Score = 143 bits (361), Expect = 7e-32
Identities = 61/86 (70%), Positives = 70/86 (81%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G G GG+M C DS E LS EDAECCICLSAYDDGVELR+LPCGHHFHC C+DK
Sbjct: 295 GNTQGAAGGIMIECDADSPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCACVDK 354
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KS+++A++EV
Sbjct: 355 WLHINATCPLCKYNILKSTSHAQDEV 380
>ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 385
Score = 143 bits (361), Expect = 7e-32
Identities = 61/86 (70%), Positives = 69/86 (80%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G GP GG+M C DS E L+ EDAECCICLS+YDDGVELRELPCGHHFHC C+DK
Sbjct: 300 GTIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDK 359
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KS+ ++EEV
Sbjct: 360 WLYINATCPLCKYNILKSNTLSQEEV 385
>ref|XP_004976528.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Setaria
italica]
Length = 379
Score = 143 bits (360), Expect = 9e-32
Identities = 61/81 (75%), Positives = 68/81 (83%)
Frame = -1
Query: 857 GPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDKWLRI 678
GPFGG+M C + E+ L+AEDAECCICLSAYDDG ELRELPCGHHFHCTCIDKWL I
Sbjct: 297 GPFGGIMTECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCTCIDKWLHI 356
Query: 677 NATCPLCKYNIIKSSNNAREE 615
NATCPLCKYNI KSS+++ E
Sbjct: 357 NATCPLCKYNIRKSSSSSGSE 377
>ref|XP_004298760.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Fragaria
vesca subsp. vesca]
Length = 328
Score = 143 bits (360), Expect = 9e-32
Identities = 62/84 (73%), Positives = 69/84 (82%)
Frame = -1
Query: 863 KSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDKWL 684
+ GP GGVM C DS E LS EDAECCICLS+YDDG ELR+LPCGHHFHC+CIDKWL
Sbjct: 245 EQGPHGGVMTECGTDSPIEHVLSPEDAECCICLSSYDDGAELRQLPCGHHFHCSCIDKWL 304
Query: 683 RINATCPLCKYNIIKSSNNAREEV 612
INATCPLCKYNI+KSS+N + EV
Sbjct: 305 FINATCPLCKYNILKSSSNEQGEV 328
>gb|EOY24646.1| Zinc finger, C3HC4 type (RING finger) family protein isoform 2
[Theobroma cacao]
Length = 380
Score = 142 bits (359), Expect = 1e-31
Identities = 63/86 (73%), Positives = 70/86 (81%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G+ GP GG+M CS DS E LS +DAECCICLS YDDGVELRELPCGHHFHC C+DK
Sbjct: 297 GDAEGPVGGIMTECSTDSPMEHVLSQDDAECCICLSPYDDGVELRELPCGHHFHCACVDK 356
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KSS++ EEV
Sbjct: 357 WLYINATCPLCKYNILKSSSH--EEV 380
>gb|EOY24645.1| Zinc finger, C3HC4 type (RING finger) family protein isoform 1
[Theobroma cacao]
Length = 381
Score = 142 bits (359), Expect = 1e-31
Identities = 63/86 (73%), Positives = 70/86 (81%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G+ GP GG+M CS DS E LS +DAECCICLS YDDGVELRELPCGHHFHC C+DK
Sbjct: 298 GDAEGPVGGIMTECSTDSPMEHVLSQDDAECCICLSPYDDGVELRELPCGHHFHCACVDK 357
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KSS++ EEV
Sbjct: 358 WLYINATCPLCKYNILKSSSH--EEV 381
>gb|ESW27548.1| hypothetical protein PHAVU_003G211600g [Phaseolus vulgaris]
Length = 378
Score = 142 bits (357), Expect = 2e-31
Identities = 60/86 (69%), Positives = 70/86 (81%)
Frame = -1
Query: 869 GEKSGPFGGVMNLCSGDSSAERALSAEDAECCICLSAYDDGVELRELPCGHHFHCTCIDK 690
G G GG+M C DS E LS EDAECCICLSAYDDGVELR+LPCGHHFHC+C+DK
Sbjct: 293 GNTQGAAGGIMMECDTDSPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCSCVDK 352
Query: 689 WLRINATCPLCKYNIIKSSNNAREEV 612
WL INATCPLCKYNI+KS+++ ++EV
Sbjct: 353 WLHINATCPLCKYNILKSTSHGQDEV 378