BLASTX nr result

ID: Ephedra28_contig00001269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00001269
         (730 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76238.1| unknown [Picea sitchensis]                              68   3e-09
ref|XP_006848537.1| hypothetical protein AMTR_s00169p00025570 [A...    59   1e-06
ref|XP_002963146.1| hypothetical protein SELMODRAFT_35606 [Selag...    57   8e-06

>gb|ADE76238.1| unknown [Picea sitchensis]
          Length = 465

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 15/95 (15%)
 Frame = -1

Query: 241 SSSKLNAGAPAFVPRSPVFSVAAPGIAQAV-------DVCVEQHEEHVKDASA------- 104
           SSSKLNA AP FVPR+ V +V   G+  +        +  +EQ     +  SA       
Sbjct: 79  SSSKLNAQAPVFVPRAQV-AVHVGGLIPSSFTEHSLPEQFIEQEVVGSEPESAATPTPTP 137

Query: 103 -SKPVLTDELRHKIVKQVEFYFSDANLRLDKHLLK 2
            SK VLT+ELR K+VKQVEFYFSDANL  DK+L+K
Sbjct: 138 SSKAVLTEELRQKVVKQVEFYFSDANLPTDKYLMK 172


>ref|XP_006848537.1| hypothetical protein AMTR_s00169p00025570 [Amborella trichopoda]
           gi|548851850|gb|ERN10118.1| hypothetical protein
           AMTR_s00169p00025570 [Amborella trichopoda]
          Length = 394

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 16/106 (15%)
 Frame = -1

Query: 271 DREELSVERP-----SSSKLNAGAPAFVPRS-----------PVFSVAAPGIAQAVDVCV 140
           +R + S E P     S SKLNA AP FVPR+           P F V+  G         
Sbjct: 7   ERPQESAEAPLERIVSFSKLNAQAPEFVPRAQAQAHVSAYMYPSFQVSGTGWIYGG---- 62

Query: 139 EQHEEHVKDASASKPVLTDELRHKIVKQVEFYFSDANLRLDKHLLK 2
           E  +  +   S+SK +LTDEL+ KI+KQVE++ SD++L  + +L+K
Sbjct: 63  ESGQLQMVSTSSSKEILTDELKQKIIKQVEYHLSDSSLATNDYLMK 108


>ref|XP_002963146.1| hypothetical protein SELMODRAFT_35606 [Selaginella moellendorffii]
           gi|300170007|gb|EFJ36609.1| hypothetical protein
           SELMODRAFT_35606 [Selaginella moellendorffii]
          Length = 270

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 21/101 (20%)
 Frame = -1

Query: 241 SSSKLNAGAPAFVPRS---------------------PVFSVAAPGIAQAVDVCVEQHEE 125
           S SKLNAGAP FVP++                     PV    +P  A +V V V+    
Sbjct: 6   SLSKLNAGAPVFVPKATSPQPPPAALQPGQPGVLSFPPVPVQPSPPEAPSV-VDVDDQNA 64

Query: 124 HVKDASASKPVLTDELRHKIVKQVEFYFSDANLRLDKHLLK 2
            V  +S     L+++ R ++V+QVEFYFSDANL  D +L+K
Sbjct: 65  SVPSSSQKSSALSEDTRTQVVQQVEFYFSDANLPTDNYLMK 105


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