BLASTX nr result

ID: Ephedra28_contig00001216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00001216
         (675 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001779388.1| predicted protein [Physcomitrella patens] gi...   135   9e-30
ref|XP_001761821.1| predicted protein [Physcomitrella patens] gi...   134   3e-29
ref|XP_001770548.1| predicted protein [Physcomitrella patens] gi...   134   3e-29
ref|XP_001780529.1| predicted protein [Physcomitrella patens] gi...   129   6e-28
ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...   127   3e-27
emb|CBI29360.3| unnamed protein product [Vitis vinifera]              127   3e-27
ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [A...   122   8e-26
ref|XP_004292506.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...   122   1e-25
ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-l...   121   2e-25
ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-l...   121   2e-25
ref|XP_004253267.1| PREDICTED: polyadenylate-binding protein 5-l...   121   2e-25
ref|XP_006342637.1| PREDICTED: polyadenylate-binding protein 8-l...   120   4e-25
gb|EMJ02395.1| hypothetical protein PRUPE_ppa002584mg [Prunus pe...   120   5e-25
ref|XP_002313862.1| polyadenylate-binding family protein [Populu...   120   5e-25
gb|ABK94932.1| unknown [Populus trichocarpa]                          120   5e-25
ref|XP_002300227.1| polyadenylate-binding family protein [Populu...   119   7e-25
ref|XP_004252758.1| PREDICTED: polyadenylate-binding protein 2-l...   119   9e-25
gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]            119   1e-24
dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]           119   1e-24
ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula...   118   2e-24

>ref|XP_001779388.1| predicted protein [Physcomitrella patens]
           gi|162669186|gb|EDQ55778.1| predicted protein
           [Physcomitrella patens]
          Length = 650

 Score =  135 bits (341), Expect = 9e-30
 Identities = 75/132 (56%), Positives = 90/132 (68%), Gaps = 2/132 (1%)
 Frame = -3

Query: 556 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVG--RTRVSIETLASDLASAS 383
           R  PN RN PD     QG+M AM+  P +I G   AN D G  +  + I  LAS LASA 
Sbjct: 508 RYTPNARNMPDTAVPPQGIMGAMVPVPLEIGGLPVANVDSGVPQQPLPISALASALASAP 567

Query: 382 RDQQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVL 203
            +QQRAMLGEQL+PL+ QLE + A K+TGMLLEMDQ E+LH+IESPE LRAKV EAMDVL
Sbjct: 568 PEQQRAMLGEQLYPLVDQLEHDYAGKVTGMLLEMDQTEVLHLIESPEALRAKVAEAMDVL 627

Query: 202 RLSQTSVTNTAD 167
           R++Q +     D
Sbjct: 628 RMAQAAPVAPTD 639


>ref|XP_001761821.1| predicted protein [Physcomitrella patens]
           gi|162686876|gb|EDQ73262.1| predicted protein
           [Physcomitrella patens]
          Length = 153

 Score =  134 bits (337), Expect = 3e-29
 Identities = 72/124 (58%), Positives = 90/124 (72%), Gaps = 2/124 (1%)
 Frame = -3

Query: 556 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVG--RTRVSIETLASDLASAS 383
           R  PN RN PD +   QG++  M+  P +I GA AAN D G  +  + I  LAS LASA 
Sbjct: 11  RYIPNARNTPDVSVPPQGIINTMLPVPLEIGGAPAANVDPGVPQQPLPISALASALASAP 70

Query: 382 RDQQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVL 203
            DQQRAMLGEQL+PL+ QLE + A K+TGMLLEMDQ E+LH+IESP+ L+AKV EAM+VL
Sbjct: 71  PDQQRAMLGEQLYPLVDQLEHDFAGKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVL 130

Query: 202 RLSQ 191
           R++Q
Sbjct: 131 RMAQ 134


>ref|XP_001770548.1| predicted protein [Physcomitrella patens]
           gi|162678256|gb|EDQ64717.1| predicted protein
           [Physcomitrella patens]
          Length = 645

 Score =  134 bits (336), Expect = 3e-29
 Identities = 72/124 (58%), Positives = 88/124 (70%), Gaps = 2/124 (1%)
 Frame = -3

Query: 556 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVG--RTRVSIETLASDLASAS 383
           R   N RN PD     QG+M AM+  P +I G   AN+D G  +  + I  LAS LASA 
Sbjct: 503 RYTTNARNTPDVAVPPQGIMGAMLPVPIEIGGVPVANADAGVPQQPLPISALASALASAP 562

Query: 382 RDQQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVL 203
            +QQRAMLGEQL+PL+ QLE + A K+TGMLLEMDQ E+LH+IESPE L+AKV EAMDVL
Sbjct: 563 PEQQRAMLGEQLYPLVDQLEHDFAGKVTGMLLEMDQTEVLHLIESPEALKAKVAEAMDVL 622

Query: 202 RLSQ 191
           R++Q
Sbjct: 623 RMAQ 626


>ref|XP_001780529.1| predicted protein [Physcomitrella patens]
           gi|162668007|gb|EDQ54623.1| predicted protein
           [Physcomitrella patens]
          Length = 647

 Score =  129 bits (325), Expect = 6e-28
 Identities = 73/125 (58%), Positives = 88/125 (70%), Gaps = 3/125 (2%)
 Frame = -3

Query: 556 RMPPNMRNGPDPNFMS-QGVMPAMMSGPSDIAGAQAANSDVG--RTRVSIETLASDLASA 386
           R  PN+RN  D      QG+M  M+  P +I G  AAN D G  +  + I  LAS LASA
Sbjct: 504 RYTPNVRNASDGTAPPPQGMMGVMLPVPLEIGGMPAANVDSGVPQQPLPISALASALASA 563

Query: 385 SRDQQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDV 206
             DQQRAMLGEQL+PL+ QLE E A K+TGMLLEMDQ E+LH+IESPE L+AKV EAM+V
Sbjct: 564 PPDQQRAMLGEQLYPLVDQLEHEFAGKVTGMLLEMDQTEVLHLIESPEALKAKVNEAMEV 623

Query: 205 LRLSQ 191
           LR++Q
Sbjct: 624 LRMAQ 628


>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
            [Vitis vinifera]
          Length = 1093

 Score =  127 bits (319), Expect = 3e-27
 Identities = 68/124 (54%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
 Frame = -3

Query: 556  RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASR 380
            R   N RNG DP+ + QG+M  +M  P D++G   +  D+ RT  V + TLAS LAS + 
Sbjct: 955  RYMANGRNGVDPSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRTGPVPMSTLASALASTTP 1014

Query: 379  DQQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLR 200
            D QR MLGEQLFPL+ ++E E A K+TGMLLEMDQ E+LH+IESP+ L+ KV EAMDVLR
Sbjct: 1015 DNQRLMLGEQLFPLVERIERETAGKVTGMLLEMDQTEVLHLIESPDALKNKVAEAMDVLR 1074

Query: 199  LSQT 188
             S +
Sbjct: 1075 ASSS 1078


>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score =  127 bits (319), Expect = 3e-27
 Identities = 68/124 (54%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
 Frame = -3

Query: 556 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASR 380
           R   N RNG DP+ + QG+M  +M  P D++G   +  D+ RT  V + TLAS LAS + 
Sbjct: 495 RYMANGRNGVDPSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRTGPVPMSTLASALASTTP 554

Query: 379 DQQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLR 200
           D QR MLGEQLFPL+ ++E E A K+TGMLLEMDQ E+LH+IESP+ L+ KV EAMDVLR
Sbjct: 555 DNQRLMLGEQLFPLVERIERETAGKVTGMLLEMDQTEVLHLIESPDALKNKVAEAMDVLR 614

Query: 199 LSQT 188
            S +
Sbjct: 615 ASSS 618


>ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [Amborella trichopoda]
           gi|548844219|gb|ERN03845.1| hypothetical protein
           AMTR_s00078p00149860 [Amborella trichopoda]
          Length = 645

 Score =  122 bits (307), Expect = 8e-26
 Identities = 66/128 (51%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
 Frame = -3

Query: 544 NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASRDQQR 368
           N RNG DP  + QG+M  M+  P D+ G   +  +  R + V I TLAS LASA+ +QQR
Sbjct: 509 NARNGLDPTMVPQGLMSPMLPLPLDVPGMVMSPMEAPRPQPVPIGTLASALASATPEQQR 568

Query: 367 AMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLRLSQT 188
            MLGEQLFPL+ ++E + A K+TGMLLEMDQ E+LH+IESP+ L+ KV EA++VLR++Q 
Sbjct: 569 VMLGEQLFPLVDRMEHDHAGKVTGMLLEMDQTEVLHLIESPDALKTKVGEALEVLRMAQA 628

Query: 187 SVTNTADH 164
           +    +DH
Sbjct: 629 AA--PSDH 634


>ref|XP_004292506.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
           5-like [Fragaria vesca subsp. vesca]
          Length = 635

 Score =  122 bits (305), Expect = 1e-25
 Identities = 70/126 (55%), Positives = 91/126 (72%), Gaps = 2/126 (1%)
 Frame = -3

Query: 538 RNGPDPNFMSQGVMPAMMSGPSDIAGAQAA-NSDVGRTR-VSIETLASDLASASRDQQRA 365
           RNG D     QG++  +M  P D +G  A  +SD+ RT  + + TLAS LASA+ + QR 
Sbjct: 503 RNGVDSAVSPQGLVSPVMPLPFDGSGMPAVTSSDIQRTGPMPMSTLASALASATPENQRL 562

Query: 364 MLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLRLSQTS 185
           MLGEQL+PL+ ++EPEL AK+TGMLLEMDQ E+LH+IESP+ L+ KV EAMDVLR + TS
Sbjct: 563 MLGEQLYPLVERIEPELTAKVTGMLLEMDQTEVLHLIESPDALKDKVAEAMDVLR-NATS 621

Query: 184 VTNTAD 167
            T+ AD
Sbjct: 622 KTDVAD 627


>ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
          Length = 652

 Score =  121 bits (304), Expect = 2e-25
 Identities = 65/116 (56%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = -3

Query: 544 NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASRDQQR 368
           N RNG +   + QG++  MM    D +G  +  +D+ R+R V   TLAS LASAS + QR
Sbjct: 518 NARNGLESPVLPQGLVSPMMPLAFDGSGVSSPPNDIQRSRAVPTSTLASALASASLENQR 577

Query: 367 AMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLR 200
            MLGEQL+PL+ +LEP  AAK+TGMLLEMDQ E+LH+IESP+DL++KV EAM+VLR
Sbjct: 578 VMLGEQLYPLVERLEPSHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLR 633


>ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
          Length = 652

 Score =  121 bits (304), Expect = 2e-25
 Identities = 65/116 (56%), Positives = 85/116 (73%), Gaps = 1/116 (0%)
 Frame = -3

Query: 544 NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASRDQQR 368
           N RNG +   + QG++  MM    D +G  +  +D+ R+R V   TLAS LASAS + QR
Sbjct: 518 NARNGLETPVLPQGLVSPMMPLAFDGSGVSSPPNDIQRSRAVPTSTLASALASASLENQR 577

Query: 367 AMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLR 200
            MLGEQL+PL+ +LEP  AAK+TGMLLEMDQ E+LH+IESP+DL++KV EAM+VLR
Sbjct: 578 VMLGEQLYPLVERLEPSHAAKVTGMLLEMDQPEVLHLIESPDDLKSKVAEAMEVLR 633


>ref|XP_004253267.1| PREDICTED: polyadenylate-binding protein 5-like [Solanum
           lycopersicum]
          Length = 649

 Score =  121 bits (303), Expect = 2e-25
 Identities = 69/127 (54%), Positives = 89/127 (70%), Gaps = 2/127 (1%)
 Frame = -3

Query: 556 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANS-DVGRTR-VSIETLASDLASAS 383
           R  PN RNG  P+ +SQG+M ++M  P D + A  A   D+ R+  V   TLAS LA AS
Sbjct: 513 RFNPNGRNGMYPS-ISQGMMGSIMQAPFDASSAMTAPPLDIQRSNPVPPSTLASSLAFAS 571

Query: 382 RDQQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVL 203
            + Q AMLGEQLFPL+  +E + A K+TGMLLEMDQ E+LH+IESP+DL+ KV EAM+VL
Sbjct: 572 PEDQHAMLGEQLFPLVEHIERDHAGKVTGMLLEMDQTEVLHLIESPDDLKEKVSEAMNVL 631

Query: 202 RLSQTSV 182
           R++  SV
Sbjct: 632 RVAPASV 638


>ref|XP_006342637.1| PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
          Length = 665

 Score =  120 bits (301), Expect = 4e-25
 Identities = 70/132 (53%), Positives = 91/132 (68%), Gaps = 2/132 (1%)
 Frame = -3

Query: 556 RMPP--NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASAS 383
           R PP  N+ +GP P     GV   M+S P D+ G    ++ +G+  V I TLA+ LA+A 
Sbjct: 527 RYPPGRNVPDGPMP-----GVAGGMLSVPYDMGGMLPRDAAMGQP-VPISTLATALANAP 580

Query: 382 RDQQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVL 203
            +QQR MLGE L+PL+ QLE E AAK+TGMLLEMDQ E+LH++ESPE L+AKV EAMDVL
Sbjct: 581 PEQQRTMLGESLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPEALKAKVSEAMDVL 640

Query: 202 RLSQTSVTNTAD 167
           R  Q + ++ AD
Sbjct: 641 RNVQQATSSPAD 652


>gb|EMJ02395.1| hypothetical protein PRUPE_ppa002584mg [Prunus persica]
          Length = 655

 Score =  120 bits (300), Expect = 5e-25
 Identities = 64/120 (53%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
 Frame = -3

Query: 544 NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTR-VSIETLASDLASASRDQQR 368
           N RNG DP+   QG++  +M  P D +G     +D  R+  + + TLAS LASA+ + QR
Sbjct: 521 NARNGVDPSVTPQGIVGPIMPLPFDGSGMPVTPNDSQRSGPLPMSTLASALASATPENQR 580

Query: 367 AMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLRLSQT 188
            MLGEQL+PL+ ++EPE  AK+TGMLLEMDQ E+LH+IESP+ L+ KV EAMDVLR + T
Sbjct: 581 LMLGEQLYPLVERIEPEHTAKVTGMLLEMDQTEVLHLIESPDALKDKVAEAMDVLRKAAT 640


>ref|XP_002313862.1| polyadenylate-binding family protein [Populus trichocarpa]
           gi|222850270|gb|EEE87817.1| polyadenylate-binding family
           protein [Populus trichocarpa]
          Length = 642

 Score =  120 bits (300), Expect = 5e-25
 Identities = 63/119 (52%), Positives = 83/119 (69%)
 Frame = -3

Query: 523 PNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASASRDQQRAMLGEQLF 344
           P+    GV   M+S P D+ G    ++ + +  + I  LA+ LA+A+ DQQR MLGE L+
Sbjct: 512 PDVPMTGVAGGMLSVPYDMGGMPMRDAALSQP-IPIGALATALANATPDQQRTMLGENLY 570

Query: 343 PLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLRLSQTSVTNTAD 167
           PL+ QLEPE AAK+TGMLLEMDQ E+LH++ESPE L++KV EAM+VLR  Q   T TAD
Sbjct: 571 PLVEQLEPEAAAKVTGMLLEMDQTEVLHLLESPEALKSKVNEAMEVLRTVQQQATGTAD 629


>gb|ABK94932.1| unknown [Populus trichocarpa]
          Length = 408

 Score =  120 bits (300), Expect = 5e-25
 Identities = 63/119 (52%), Positives = 83/119 (69%)
 Frame = -3

Query: 523 PNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASASRDQQRAMLGEQLF 344
           P+    GV   M+S P D+ G    ++ + +  + I  LA+ LA+A+ DQQR MLGE L+
Sbjct: 278 PDVPMTGVAGGMLSVPYDMGGMPMRDAALSQP-IPIGALATALANATPDQQRTMLGENLY 336

Query: 343 PLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLRLSQTSVTNTAD 167
           PL+ QLEPE AAK+TGMLLEMDQ E+LH++ESPE L++KV EAM+VLR  Q   T TAD
Sbjct: 337 PLVEQLEPEAAAKVTGMLLEMDQTEVLHLLESPEALKSKVNEAMEVLRTVQQQATGTAD 395


>ref|XP_002300227.1| polyadenylate-binding family protein [Populus trichocarpa]
           gi|222847485|gb|EEE85032.1| polyadenylate-binding family
           protein [Populus trichocarpa]
          Length = 644

 Score =  119 bits (299), Expect = 7e-25
 Identities = 62/119 (52%), Positives = 83/119 (69%)
 Frame = -3

Query: 523 PNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASASRDQQRAMLGEQLF 344
           P+    GV   M+  P D+ G    ++ + ++ + +  LA+ LA+A+ DQQR MLGE L+
Sbjct: 514 PDVPMTGVAGGMLPVPYDMGGMPMRDAALSQS-IPVGALATALANATPDQQRTMLGENLY 572

Query: 343 PLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLRLSQTSVTNTAD 167
           PL+ QLEPE AAK+TGMLLEMDQ E+LH++ESPE L+AKV EAM+VLR  Q   T TAD
Sbjct: 573 PLVEQLEPEAAAKVTGMLLEMDQTEVLHLLESPEALKAKVNEAMEVLRTVQQQATGTAD 631


>ref|XP_004252758.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum
           lycopersicum]
          Length = 666

 Score =  119 bits (298), Expect = 9e-25
 Identities = 69/132 (52%), Positives = 88/132 (66%), Gaps = 2/132 (1%)
 Frame = -3

Query: 556 RMPP--NMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASAS 383
           R PP  N+ +GP P     GV   M+S P D+ G    ++      V I TLA+ LA+A 
Sbjct: 527 RYPPGRNVPDGPMP-----GVAGGMLSVPYDMGGMLPRDAAAMGQPVPISTLATALANAP 581

Query: 382 RDQQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVL 203
            +QQR MLGE L+PL+ QLE E AAK+TGMLLEMDQ E+LH++ESPE L+AKV EAMDVL
Sbjct: 582 PEQQRTMLGESLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPEALKAKVSEAMDVL 641

Query: 202 RLSQTSVTNTAD 167
           R  Q + ++ AD
Sbjct: 642 RNVQQATSSPAD 653


>gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
          Length = 479

 Score =  119 bits (297), Expect = 1e-24
 Identities = 72/130 (55%), Positives = 89/130 (68%)
 Frame = -3

Query: 556 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASASRD 377
           R PP  RNGP+      GV   M+S P D+ G    +S +G+  + I TLAS LA+A  +
Sbjct: 342 RYPPG-RNGPEGPM--PGVPGGMLSVPYDMGGMLPRDSAMGQP-MPISTLASALANAPPE 397

Query: 376 QQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLRL 197
           QQR MLGE L+PL+ QLE E AAK+TGMLLEMDQ E+LH++ESPE L+AKV EAM+VLR 
Sbjct: 398 QQRTMLGESLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRN 457

Query: 196 SQTSVTNTAD 167
            Q   TN AD
Sbjct: 458 VQ-QTTNPAD 466


>dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
          Length = 657

 Score =  119 bits (297), Expect = 1e-24
 Identities = 72/130 (55%), Positives = 89/130 (68%)
 Frame = -3

Query: 556 RMPPNMRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASASRD 377
           R PP  RNGP+      GV   M+S P D+ G    +S +G+  + I TLAS LA+A  +
Sbjct: 520 RYPPG-RNGPEGPM--PGVPGGMLSVPYDMGGMLPRDSAMGQP-MPISTLASALANAPPE 575

Query: 376 QQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVLRL 197
           QQR MLGE L+PL+ QLE E AAK+TGMLLEMDQ E+LH++ESPE L+AKV EAM+VLR 
Sbjct: 576 QQRTMLGESLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRN 635

Query: 196 SQTSVTNTAD 167
            Q   TN AD
Sbjct: 636 VQ-QTTNPAD 644


>ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
           gi|355508977|gb|AES90119.1| Poly(A)-binding protein
           [Medicago truncatula]
          Length = 654

 Score =  118 bits (295), Expect = 2e-24
 Identities = 69/133 (51%), Positives = 89/133 (66%), Gaps = 3/133 (2%)
 Frame = -3

Query: 556 RMPPN--MRNGPDPNFMSQGVMPAMMSGPSDIAGAQAANSDVGRTRVSIETLASDLASAS 383
           R PP   M +GP P     GV   M S P D+ G    ++ + + ++ I  LAS LA+AS
Sbjct: 515 RYPPGRGMPDGPMP-----GVAGGMYSVPYDVGGMPIRDASLSQ-QIPIGALASHLANAS 568

Query: 382 RDQQRAMLGEQLFPLIAQLEPELAAKITGMLLEMDQNEILHIIESPEDLRAKVQEAMDVL 203
            +QQR MLGE L+PL+ QLEP+ AAK+TGMLLEMDQ E+LH++ESPE L+AKV EAMDVL
Sbjct: 569 PEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVL 628

Query: 202 R-LSQTSVTNTAD 167
           R ++Q      AD
Sbjct: 629 RNVAQQQAGGAAD 641


Top