BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00001126
         (2113 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   440   e-120
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   431   e-118
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]               431   e-118
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   430   e-117
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               419   e-114
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi...   406   e-110
gb|AAK12626.1| unknown protein [Aedes aegypti]                        405   e-110
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...   398   e-108
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi...   396   e-107
ref|XP_003376808.1| retrovirus-related Pol polyprotein from tran...   395   e-107
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   394   e-106
emb|CAN75466.1| hypothetical protein VITISV_025054 [Vitis vinifera]   389   e-105
gb|AFB73911.1| polyprotein [Citrus sinensis]                          389   e-105
gb|AFB73912.1| polyprotein [Citrus sinensis]                          388   e-105
ref|XP_004234454.1| PREDICTED: uncharacterized protein LOC101244...   386   e-104
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   385   e-104
emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]   385   e-104
emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]   384   e-104
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  384   e-103
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...   384   e-103

>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  440 bits (1131), Expect = e-120
 Identities = 263/716 (36%), Positives = 399/716 (55%), Gaps = 13/716 (1%)
 Frame = -1

Query: 2110 KEEWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPV-KGYGDIILNFGSSQIT 1934
            +E W +DSGC +HMS D   FI    +   K +  +G     V +G GDI ++       
Sbjct: 321  EETWLVDSGCTNHMSKDVRHFIALDRS--KKIIIRIGNGGKVVSEGKGDIRVSTNKGDHV 378

Query: 1933 LKDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYNKKIV-AEGSEHNGLFV 1757
            +KDVLYV  L +NL+S+ ++++  Y +   + E+ K   +    +KI+  +  + +   +
Sbjct: 379  IKDVLYVPELARNLLSVSQMISNGYRV---IFEDNKCVIQDLKGRKILDIKMKDRSFPII 435

Query: 1756 MKPLKTECYLT---NTEISNLWHNRLGHISNVYLEKIETT--VSHGPKNPISTSKCNNCI 1592
             K  + E Y+      E ++LWH R GH++   +E ++T   V   PK  +    C  C 
Sbjct: 436  WKKSREETYMAFEEKEEQTDLWHKRFGHVNYDKIETMQTLKIVEKLPKFEVIKGICAACE 495

Query: 1591 MAKIHRKPFKSRTRT-TSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWCFLIK 1415
            M K  R+ F  ++++ T++ LE+IHSD+CGP+   + N  RY L F DD+S+MTW + +K
Sbjct: 496  MGKQSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLK 555

Query: 1414 *KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQ 1235
             KSEV   F  F+  V+ +   +I  LRTD G EF S EF + C+  GI  E T PY+PQ
Sbjct: 556  NKSEVITKFKIFKPYVENQSESRIKRLRTDGGGEFLSREFIKLCQESGIHHEITTPYSPQ 615

Query: 1234 QNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQK-TPFEMWY 1058
            QNGVAER+N+ L+EM R ++   ++S K+W EA  T+TY+ N +P K + +  TP E+W 
Sbjct: 616  QNGVAERRNRTLVEMARSMIEEKKLSNKFWAEAIATSTYLQNRLPSKSLEKGVTPMEIWS 675

Query: 1057 NMKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVS 878
              KPS+ HL+VFGC+C+ HIP E R KLD KAK+GI VGYS  SKGY++     +K+ VS
Sbjct: 676  GKKPSVDHLKVFGCVCYIHIPDEKRRKLDTKAKQGIFVGYSNESKGYRVFLLNEEKIEVS 735

Query: 877  RDVEFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIP 698
            +DV F E          ++  SH           E  E++ +L   + NS      +++ 
Sbjct: 736  KDVTFDE----------KKTWSHD----------EKGERKAILSLVKINSQEQGGGNDLN 775

Query: 697  SDQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVNGGVFRNYDGYLTR 518
            +      H  Q     N+LH      +N  +  +         E V    FR+ +  + +
Sbjct: 776  A------HIDQVSNAFNQLHISSRGVQNSHEEGE---------ESVGPRGFRSINNLMDQ 820

Query: 517  VRKNEGDTNL--ICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTKLP 344
              + EG+  +  +C +      E P+ + EA+ +  W  AM  E++M+   KTWE+   P
Sbjct: 821  TNEVEGEALIHEMCLMMA----EEPQALEEAMKDEKWIEAMREELRMIEKNKTWEVVARP 876

Query: 343  KDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRTIRMLLK 164
            KDK VI  +W++ +K   +GE  K KAR+VA+GF Q+ G DY +TFAP +   TIR ++ 
Sbjct: 877  KDKNVISVKWIFRLKTDASGEAIKRKARLVARGFTQEYGVDYLETFAPVSRYDTIRTIMA 936

Query: 163  LAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGYSENLD--LVCKLKKSLYGLKQ 2
            +A  +GW +F +DVKSAFL+ +LEEEVY+ QPPG+ E  +   V KL K+LYGLKQ
Sbjct: 937  IAAQQGWKLFQMDVKSAFLNGDLEEEVYIEQPPGFIEEKEEGKVLKLHKALYGLKQ 992


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  431 bits (1109), Expect = e-118
 Identities = 257/722 (35%), Positives = 400/722 (55%), Gaps = 18/722 (2%)
 Frame = -1

Query: 2113 QKEEWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSSQIT 1934
            +K+ WFLDSGC++HM G +E F++  S    ++VR      + V+G G + L        
Sbjct: 293  EKQIWFLDSGCSNHMCGTREWFLELDSGFK-QNVRLGDDRRMAVEGKGKLRLEVDGRIQV 351

Query: 1933 LKDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYN--KKIVAEGS-EHNGL 1763
            + DV +V GL+ NL S+ +L   +     F+ E     C++ +   K++V   +   N +
Sbjct: 352  ISDVYFVPGLKNNLFSVGQL---QQKGLRFIIEGD--VCEVWHKTEKRMVMHSTMTKNRM 406

Query: 1762 FVM--------KPLKTECYLTNTEISNLWHNRLGHISNVYLEKI--ETTVSHGPKNPIST 1613
            FV+        +  +T C     + +N+WH R GH+++  L  +  +  V   PK  +  
Sbjct: 407  FVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGE 466

Query: 1612 SK--CNNCIMAKIHRKPF-KSRTRTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYS 1442
             +  C+ C+  K  R+   K     +++ L+++H+D+CGPI P + + KRYIL F DD+S
Sbjct: 467  EEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFS 526

Query: 1441 KMTWCFLIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRR 1262
            +  W +L+  KSE F+ F +F+ +V+ E   K+ CLR+D G E+ S EF ++C+  GI+R
Sbjct: 527  RKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKR 586

Query: 1261 EQTVPYTPQQNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQ 1082
            + T  YTPQQNGVAERKN+ ++ M RC+L+   +  K+W EA + A YILN  P K +  
Sbjct: 587  QLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALND 646

Query: 1081 KTPFEMWYNMKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDE 902
             TP E W + KPS+ HLR+FG L +  +P + R KLD K+ + +M G S+ SK Y++ D 
Sbjct: 647  ITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDP 706

Query: 901  ETKKVIVSRDVEFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTR 722
             T K+++SRDV+F E+      +K  E     +   +D S+ E   +E            
Sbjct: 707  ATGKILISRDVQFDEERGWEWEDKSLE-----EELVWDNSDHEPAGEEG----------- 750

Query: 721  PE*NDEIPSDQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVNGGVFR 542
            PE N     DQ + +   +E V +      P      V+ ++ P+W K+        V  
Sbjct: 751  PEINHNGQQDQ-EETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDY-------VVG 802

Query: 541  NYDGYLTRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTW 362
            N    +T+  ++E        ++    P+ P    EA     W+ AM+ EI  + +  TW
Sbjct: 803  NARVLITQDEEDE-------VLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTW 855

Query: 361  ELTKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRT 182
            EL +LP++ +VIG +W++  K    GE+DK+KAR+VAKG+HQ+ G D+ + FAP A   T
Sbjct: 856  ELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDT 915

Query: 181  IRMLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGL 8
            IR++L LA  KGW VF LDVKSAFLH +L+E+V++ QP G+   E    V KLKK+LYGL
Sbjct: 916  IRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGL 975

Query: 7    KQ 2
            KQ
Sbjct: 976  KQ 977


>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
          Length = 1207

 Score =  431 bits (1109), Expect = e-118
 Identities = 257/722 (35%), Positives = 400/722 (55%), Gaps = 18/722 (2%)
 Frame = -1

Query: 2113 QKEEWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSSQIT 1934
            +K+ WFLDSGC++HM G +E F++  S    ++VR      + V+G G + L        
Sbjct: 198  EKQIWFLDSGCSNHMCGTREWFLELDSGFK-QNVRLGDDRRMAVEGKGKLRLEVDGRIQV 256

Query: 1933 LKDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYN--KKIVAEGS-EHNGL 1763
            + DV +V GL+ NL S+ +L   +     F+ E     C++ +   K++V   +   N +
Sbjct: 257  ISDVYFVPGLKNNLFSVGQL---QQKGLRFIIEGD--VCEVWHKTEKRMVMHSTMTKNRM 311

Query: 1762 FVM--------KPLKTECYLTNTEISNLWHNRLGHISNVYLEKI--ETTVSHGPKNPIST 1613
            FV+        +  +T C     + +N+WH R GH+++  L  +  +  V   PK  +  
Sbjct: 312  FVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGE 371

Query: 1612 SK--CNNCIMAKIHRKPF-KSRTRTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYS 1442
             +  C+ C+  K  R+   K     +++ L+++H+D+CGPI P + + KRYIL F DD+S
Sbjct: 372  EEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFS 431

Query: 1441 KMTWCFLIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRR 1262
            +  W +L+  KSE F+ F +F+ +V+ E   K+ CLR+D G E+ S EF ++C+  GI+R
Sbjct: 432  RKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKR 491

Query: 1261 EQTVPYTPQQNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQ 1082
            + T  YTPQQNGVAERKN+ ++ M RC+L+   +  K+W EA + A YILN  P K +  
Sbjct: 492  QLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALND 551

Query: 1081 KTPFEMWYNMKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDE 902
             TP E W + KPS+ HLR+FG L +  +P + R KLD K+ + +M G S+ SK Y++ D 
Sbjct: 552  ITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDP 611

Query: 901  ETKKVIVSRDVEFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTR 722
             T K+++SRDV+F E+      +K  E     +   +D S+ E   +E            
Sbjct: 612  ATGKILISRDVQFDEERGWEWEDKSLE-----EELVWDNSDHEPAGEEG----------- 655

Query: 721  PE*NDEIPSDQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVNGGVFR 542
            PE N     DQ + +   +E V +      P      V+ ++ P+W K+        V  
Sbjct: 656  PEINHNGQQDQ-EETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDY-------VVG 707

Query: 541  NYDGYLTRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTW 362
            N    +T+  ++E        ++    P+ P    EA     W+ AM+ EI  + +  TW
Sbjct: 708  NARVLITQDEEDE-------VLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTW 760

Query: 361  ELTKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRT 182
            EL +LP++ +VIG +W++  K    GE+DK+KAR+VAKG+HQ+ G D+ + FAP A   T
Sbjct: 761  ELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDT 820

Query: 181  IRMLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGL 8
            IR++L LA  KGW VF LDVKSAFLH +L+E+V++ QP G+   E    V KLKK+LYGL
Sbjct: 821  IRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGL 880

Query: 7    KQ 2
            KQ
Sbjct: 881  KQ 882


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score =  430 bits (1105), Expect = e-117
 Identities = 257/722 (35%), Positives = 399/722 (55%), Gaps = 18/722 (2%)
 Frame = -1

Query: 2113 QKEEWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSSQIT 1934
            +K+ WFLDSGC++HM G +E F++  S    ++VR      + V+G G + L        
Sbjct: 293  EKQIWFLDSGCSNHMCGTREWFLELDSGFK-QNVRLGDDRRMAVEGKGKLRLEVDGRIQV 351

Query: 1933 LKDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYN--KKIVAEGS-EHNGL 1763
            + DV +V GL+ NL S+ +L   +     F+ E     C++ +   K++V   +   N +
Sbjct: 352  ISDVYFVPGLKNNLFSVGQL---QQKGLRFIIEGD--VCEVWHKTEKRMVMHSTMTKNRM 406

Query: 1762 FVM--------KPLKTECYLTNTEISNLWHNRLGHISNVYLEKI--ETTVSHGPKNPIST 1613
            FV+        +  +T C     + +N+WH R GH+++  L  +  +  V   PK  +  
Sbjct: 407  FVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGE 466

Query: 1612 SK--CNNCIMAKIHRKPF-KSRTRTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYS 1442
             +  C+ C+  K  R+   K     +++ L+++H+D+CGPI P + + KRYIL F DD+S
Sbjct: 467  EEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFS 526

Query: 1441 KMTWCFLIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRR 1262
            +  W +L+  KSE F+ F +F+ +V+ E   K+ CLR+D G E+ S EF ++C+  GI+R
Sbjct: 527  RKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKR 586

Query: 1261 EQTVPYTPQQNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQ 1082
            + T  YTPQQNGVAERKN+ ++ M RC+L+   +  K+W EA + A YILN  P K +  
Sbjct: 587  QLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALND 646

Query: 1081 KTPFEMWYNMKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDE 902
             TP E W + KPS+ HLR+FG L +  +P + R KLD K+ + +M G S+ SK Y++ D 
Sbjct: 647  ITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDP 706

Query: 901  ETKKVIVSRDVEFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTR 722
             T K+++SRDV+F E+      +K  E     +   +D S+ E   +E            
Sbjct: 707  ATGKILISRDVQFDEERGWEWEDKSLE-----EELVWDNSDHEPAGEEG----------- 750

Query: 721  PE*NDEIPSDQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVNGGVFR 542
            PE N     DQ + +   +E V +      P      V+ ++ P+W K+        V  
Sbjct: 751  PEINHNGQQDQ-EETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDY-------VVG 802

Query: 541  NYDGYLTRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTW 362
            N    +T+  ++E        ++    P  P    EA     W+ AM+ EI  + +  TW
Sbjct: 803  NARVLITQDEEDE-------VLALFIGPGDPVCFEEAAQLEVWRKAMEAEITSIEENNTW 855

Query: 361  ELTKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRT 182
            EL +LP++ +VIG +W++  K    GE+DK+KAR+VAKG+HQ+ G D+ + FAP A   T
Sbjct: 856  ELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDT 915

Query: 181  IRMLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGL 8
            IR++L LA  KGW VF LDVKSAFLH +L+E+V++ QP G+   E    V KLKK+LYGL
Sbjct: 916  IRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGL 975

Query: 7    KQ 2
            KQ
Sbjct: 976  KQ 977


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  419 bits (1077), Expect = e-114
 Identities = 258/719 (35%), Positives = 384/719 (53%), Gaps = 17/719 (2%)
 Frame = -1

Query: 2107 EEWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSSQITLK 1928
            E WFLDSGC++HM+G KE F +     + + V+      + V G G + +        + 
Sbjct: 298  EVWFLDSGCSNHMTGSKEWFSELEEGFN-RTVKLGNDTRMSVVGKGSVKVKVNGVTQVIP 356

Query: 1927 DVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYNKK--IVAEGSEHNGLFVM 1754
            +V YV  LR NL+SL +L  Q+  +   +++     CK+ +  K  I+      N +F +
Sbjct: 357  EVYYVPELRNNLLSLGQL--QERGLAILIRDG---TCKVYHPSKGAIMETNMSGNRMFFL 411

Query: 1753 ---KPLKTECYLTNTEI----SNLWHNRLGHISNVYLEKI--ETTVSHGPKNPISTSKCN 1601
               KP K    L   E+    ++LWH R GH++   L+ +  +  V   P    +   C 
Sbjct: 412  LASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICA 471

Query: 1600 NCIMAKIHRKPFKSRTR-TTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWCF 1424
             C+  K HR+    +T   +S  L+++HSD+CGPITP +++ KRYIL F DD+++ TW +
Sbjct: 472  ICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVY 531

Query: 1423 LIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPY 1244
             +  KSE F  F  F+  V+ E    + CLRTD G EFTSNEF +FC + GI R+ T  +
Sbjct: 532  FLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAF 591

Query: 1243 TPQQNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFEM 1064
            TPQQNGVAERKN+ ++  +R +L   Q+   +W EA K + +I N  P   V   TP E 
Sbjct: 592  TPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEA 651

Query: 1063 WYNMKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVI 884
            W   KP + + RVFGC+ + HIP + R KLD K+K+ + +G SE SK +++ D   KK++
Sbjct: 652  WSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIV 711

Query: 883  VSRDVEFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDE 704
            +S+DV F ED                  + +D  + +   KE  LE  + +    E N E
Sbjct: 712  ISKDVVFDED------------------KSWDWDQADVEAKEVTLECGDEDD---EKNSE 750

Query: 703  IPSDQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVNGGVFRNYDGYL 524
            +  + I ++ S   V   N +   P+    P      P+ AK T E       R   G++
Sbjct: 751  V-VEPIAVA-SPNHVGSDNNVSSSPILA--PSSPAPSPVAAKVTRE-------RRPPGWM 799

Query: 523  TRVRKNEG---DTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELT 353
                  EG   + NL   +  +     P    +A+ +  W+ AM++EI+ +    TWELT
Sbjct: 800  ADYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEIESIVKNNTWELT 859

Query: 352  KLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRTIRM 173
             LPK    IG +WVY  K   +GE+DKYKAR+VAKG+ Q  G DY + FAP A + T+R 
Sbjct: 860  TLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAPVARLDTVRT 919

Query: 172  LLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQ 2
            +L ++    W++F LDVKSAFLH  L+EEVY+ QP G+      + V KL+K+LYGLKQ
Sbjct: 920  ILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRKALYGLKQ 978


>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1347

 Score =  406 bits (1044), Expect = e-110
 Identities = 245/714 (34%), Positives = 379/714 (53%), Gaps = 10/714 (1%)
 Frame = -1

Query: 2113 QKEEWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSSQIT 1934
            +++ W +DSGC +HM+ ++  F     +     +R    + +   G GDI +     +  
Sbjct: 322  REDVWLVDSGCTNHMTKEERYFSNINKSIKVP-IRVRNGDIVMTAGKGDITVMTRHGKRI 380

Query: 1933 LKDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYNKKIVA--EGSEHNGLF 1760
            +K+V  V GL KNL+S+ ++++  Y    +++   K C     N K +   E ++ +   
Sbjct: 381  IKNVFLVPGLEKNLLSVPQIISSGY----WVRFQDKRCIIQDANGKEIMNIEMTDKSFKI 436

Query: 1759 VMKPLKTECYLTNTEISNLWHNRLGHISNVYLEKIETT--VSHGPKNPISTSKCNNCIMA 1586
             +  ++ E    N +    WH RLGH+SN  L++++    V+  P+  ++   C  C + 
Sbjct: 437  KLSSVEEEAMTANVQTEETWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKETCKACNLG 496

Query: 1585 KIHRKPFKSRTRTTSR-CLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWCFLIK*K 1409
            K  RK F   ++T +R  LE++H+D+CGP+   + +  RY ++F DDY+ M W + +K K
Sbjct: 497  KQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQK 556

Query: 1408 SEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQN 1229
            SE F  F  F+  V+ + N  I  LR            + FCE++GI R+ T+PY+PQQN
Sbjct: 557  SETFATFKKFKALVEKQSNCSIKTLRP----------MEVFCEDEGINRQVTLPYSPQQN 606

Query: 1228 GVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQK-TPFEMWYNM 1052
            G AERKN+ L+EM R +LV   +  K W EA  T+ Y+ N +P K +    TP E W   
Sbjct: 607  GAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCGH 666

Query: 1051 KPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRD 872
            KP++SHLR+FG +C+ HIP + R KLD KAK GI++GYS  +KGY++   E +KV VSRD
Sbjct: 667  KPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSRD 726

Query: 871  VEFIEDNIPYISNKPREIVSH--IQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIP 698
            V F ED   +  +K  E+     + I    ES  +     + L   + ++   E      
Sbjct: 727  VVFQEDK-KWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQIDDHANNGE------ 779

Query: 697  SDQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVNGGVFRNYDGYLTR 518
                    +S  V+ Q    EE    E+P + K +    K   E               R
Sbjct: 780  ------GETSSHVLSQVNDQEERETSESPKKYKSM----KEILEKA------------PR 817

Query: 517  VRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTKLPKD 338
            +  +E    +  C+  + N E P+   EA  + +W+ AM+ EIK++   +TW+L   P+ 
Sbjct: 818  MENDEAAQGIEACL--VANEE-PQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEK 874

Query: 337  KEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRTIRMLLKLA 158
            K VI  +W+Y IK   +G   K+KAR+VA+GF Q+ G DY +TFAP +   TIR LL  A
Sbjct: 875  KNVISVKWIYKIKTDASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYA 934

Query: 157  VNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQ 2
                W ++ +DVKSAFL+  LEEEVY+TQPPG+      + V +L K+LYGLKQ
Sbjct: 935  AQMKWRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQ 988


>gb|AAK12626.1| unknown protein [Aedes aegypti]
          Length = 1298

 Score =  405 bits (1040), Expect = e-110
 Identities = 255/722 (35%), Positives = 374/722 (51%), Gaps = 22/722 (3%)
 Frame = -1

Query: 2101 WFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSS-----QI 1937
            W +DSG ++HM+ DK  FI F  +C G      G++T  + G G  +L+         +I
Sbjct: 275  WIIDSGASAHMTCDKSFFITFEESCGGYITLADGKKT-QILGEGAGVLHGIDGDDEVIRI 333

Query: 1936 TLKDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYNKKIVAEGSEHNGLFV 1757
             +  V YV GL  NLIS+ KL  +K ++      N   C  I     +VA G    GL+ 
Sbjct: 334  DISGVKYVPGLSTNLISVEKLAQKKLDV----SFNSDGCRIIDPKGNVVATGVRCGGLYH 389

Query: 1756 MKPLKTECYLTNTE----ISNLWHNRLGH-----ISNVYLEKIETTVSHGPKNPISTSKC 1604
            ++  ++       +      +LWH RLGH        +  E++ T +  G        +C
Sbjct: 390  LRQAESSLQAAGGQHHENCQHLWHRRLGHRDWAAAERINKEELATGMKVGDCGLRLVCEC 449

Query: 1603 NNCIMAKIHRKPFKSRT-RTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWC 1427
              C+  K  R PF S   R ++R L++IH+DLCGP+  TT +  R+++   DDYS+ T  
Sbjct: 450  --CLDGKAARAPFPSIVERKSTRILDIIHTDLCGPMKTTTPSGNRFVMHLIDDYSRFTVT 507

Query: 1426 FLIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVP 1247
            +L+K KSE  +  IDF K  +     K + +R+D G EF +   + F    GI+ + T P
Sbjct: 508  YLLKHKSEAAQNIIDFVKWTENLFGRKPSVIRSDGGGEFDNKLLRDFYRANGIKPQFTTP 567

Query: 1246 YTPQQNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFE 1067
            YTPQ NGVAERKN+ + EM  C+L+ S +  ++WGEA  TATYI N IP + V  KTPFE
Sbjct: 568  YTPQSNGVAERKNRSITEMATCMLLDSGLDKRFWGEAVLTATYIQNRIPSRSV-PKTPFE 626

Query: 1066 MWYNMKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKV 887
            MW+  KP + HLRVFG   + H+P   R K+DPKAKR I VGYS   KGY+ +D ET  +
Sbjct: 627  MWWGRKPDLGHLRVFGSPAYVHVPDVKRSKMDPKAKRLIFVGYSMEHKGYRFVDTETDCI 686

Query: 886  IVSRDVEFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*ND 707
             +SRD  FIE                 Q  G   S +E P  EN    K+ N    E N 
Sbjct: 687  TISRDARFIE-----------------QENG--TSSVEIPTSENGTSKKQANG---EINP 724

Query: 706  EIPSDQIDLSHSSQEVVIQNELHEEPVQKENPV-----QNKKIPLWAKNTFEDVNGGVFR 542
                ++ D    S+E    +    E      PV     +N+ IP               +
Sbjct: 725  NPFKEETDTEEISEEEEEFSTPRAESSGVSGPVRRSARENRTIP---------------K 769

Query: 541  NYDGYLTRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTW 362
            + + YL      E    +  C  E P+     N  EAL + +W+TAM +E+       TW
Sbjct: 770  HLEDYLL-----EYAVGIAACAVEEPD-----NHLEALESAEWRTAMKDEMDSHQRNGTW 819

Query: 361  ELTKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRT 182
            EL  LP  ++ +G +W++ +KR    ++ K+KARVVA+G+ QK+G D+ + FAP     T
Sbjct: 820  ELVPLPPGRKPVGSKWIFKVKRNQEEQVVKFKARVVAQGYSQKDGIDFDQVFAPVTRQAT 879

Query: 181  IRMLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGYS--ENLDLVCKLKKSLYGL 8
            +R+ L +A  +   V HLD+++A+L+  LEEEVYM QPPG++     + VC+L++S+YGL
Sbjct: 880  LRLFLTIATKQKLIVQHLDIRTAYLNGVLEEEVYMRQPPGFTVKGKEEYVCRLRRSIYGL 939

Query: 7    KQ 2
            +Q
Sbjct: 940  RQ 941


>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score =  398 bits (1022), Expect = e-108
 Identities = 255/736 (34%), Positives = 392/736 (53%), Gaps = 32/736 (4%)
 Frame = -1

Query: 2113 QKEEWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSSQIT 1934
            ++  W+LDSGC+ HM+G+K +F+  T   DG  V+  G +T  + G G I    G+S I+
Sbjct: 666  KQRSWYLDSGCSRHMTGEKALFLTLTMK-DGGEVKFGGNQTGKIIGTGTI----GNSSIS 720

Query: 1933 LKDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYN-KKIVAEGSEHNGLFV 1757
            + +V  V+GL+ NL+S+ +     Y++  F K N   C  ++ + K I  +G     ++ 
Sbjct: 721  INNVWLVDGLKHNLLSISQFCDNGYDV-TFSKTN---CTLVNKDDKSITFKGKRVENVYK 776

Query: 1756 MK-----PLKTECYLTNTEISNLWHNRLGHISNVYLEKI-ETTVSHGPKNPI--STSKCN 1601
            +        K  C L+  +   +WH RLGH +   + KI +  +  G  N    S + C 
Sbjct: 777  INFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCG 836

Query: 1600 NCIMAKIHRKPFKSRTR-TTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWCF 1424
             C   KI +  FKS+   +TSR LE++H DL GP+   +    +Y L+  DDYS+ TW  
Sbjct: 837  ACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVK 896

Query: 1423 LIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPY 1244
             IK K    E+F  F  ++Q+E+ LKI  +R+D+G EF +  F+ FCE  GI  E + P 
Sbjct: 897  FIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPR 956

Query: 1243 TPQQNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFEM 1064
            TPQQNGV ERKN+ L EM R ++  + ++  +W EA  T+ YI N I  + + +KT +E+
Sbjct: 957  TPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYEL 1016

Query: 1063 WYNMKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVI 884
            +   +P+IS+   FGC C+    K+   K D KA+RGI +GYSE SK Y++ + ET+ V 
Sbjct: 1017 FKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVE 1076

Query: 883  VSRDVEFIEDNIP--------------------YISNKPREIVSHIQIEGFDESEIETPE 764
             S  V+F +D  P                      S++P +   + ++E   E+EI TPE
Sbjct: 1077 ESMHVKF-DDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEI-TPE 1134

Query: 763  KENVLETKETNSTRPE*NDEIPSDQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLW 584
             E+  E + +    P+  +E  S+  D   ++Q+V+     H+    +E  + +K  P  
Sbjct: 1135 AESNSEAEPS----PKVQNESASE--DFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRR 1188

Query: 583  AKNTFEDVNGGVFRNYDGYLTRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTA 404
             ++ F                  R+ E    L+  +        PK + EALS+  W  A
Sbjct: 1189 TRSHF------------------RQEESLIGLLSIIE-------PKTVEEALSDDGWILA 1223

Query: 403  MDNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGF 224
            M  E+        W+L   P  K +IG +WV+  K    GE+ + KAR+VA+G+ Q+EG 
Sbjct: 1224 MQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGI 1283

Query: 223  DYKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGYSE--N 50
            DY +TFAP A +  IR+LL  A+N G  ++ +DVKSAFL+  +EEEVY+ QPPG+ +  +
Sbjct: 1284 DYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKH 1343

Query: 49   LDLVCKLKKSLYGLKQ 2
             D V KLKKSLYGLKQ
Sbjct: 1344 PDHVYKLKKSLYGLKQ 1359


>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1200

 Score =  396 bits (1018), Expect = e-107
 Identities = 250/714 (35%), Positives = 378/714 (52%), Gaps = 18/714 (2%)
 Frame = -1

Query: 2101 WFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDII-LNFGSSQITLKD 1925
            W+LD+G ++HM+G+++ F K      GK V+      + ++G G I+ L       TL +
Sbjct: 257  WYLDNGASNHMTGNRDWFCKLDEMVTGK-VKFGDDSRIDIRGKGSILFLTKNGEPKTLAN 315

Query: 1924 VLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYNKKIVAEGSEHNGLFVMKPL 1745
            V Y+  L+ N+ISL +      ++   LK+N  T      N  + A  S +    V   +
Sbjct: 316  VYYIPDLKSNIISLGQATEAGCDVR--LKDNYLTLHDRDGNLLVKATRSRNRLYRVELKV 373

Query: 1744 KTECYLTNTEISNL--WHNRLGHISNVYLEKIETTVSHG-----PKNPISTSKCNNCIMA 1586
            K    L    +++L  WH RLGHI+   LE I+  V+       P  P     C +C++ 
Sbjct: 374  KNTKCLQLAALNDLTKWHARLGHIN---LETIKAMVTKEFVIGIPSAPKEKEICASCMLG 430

Query: 1585 KIHRKPF-KSRTRTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWCFLIK*K 1409
            K  R+ F K+ T   S+ LE+IH DLCGPI+P T  ++RYIL+  DD+S+  W FL+K K
Sbjct: 431  KQARQVFPKATTYRASQILELIHGDLCGPISPPTAAKRRYILVLIDDHSRFMWSFLLKEK 490

Query: 1408 SEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQN 1229
            SE F  F  F+  V+ E   KI  LRTD G EF S EF+ FCE +GI R  T PYTPQQN
Sbjct: 491  SEAFGKFKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQTFCEEEGIIRHLTAPYTPQQN 550

Query: 1228 GVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFEMWYNMK 1049
            GV ER+N+ L+ M R ++    +    WGEA + ATY++N +  + +  +TP+E     K
Sbjct: 551  GVVERRNRTLLGMTRSIMKHMSVPNYLWGEAIRHATYLINRVGTRALINQTPYEALKKKK 610

Query: 1048 PSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDV 869
            P++ HLRVFGC+ +  +      KLD +++  + +G    SK Y ++D  T+K+IVSRDV
Sbjct: 611  PNVEHLRVFGCVSYAKVEFPHLRKLDERSRILVYLGTETGSKAYTLLDPTTRKIIVSRDV 670

Query: 868  EFIEDNIPYISN-------KPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*N 710
             F E+     +N       K   + +  Q E  +  E+E    E + E +  +ST  +  
Sbjct: 671  VFDENKSWKWANSELIEIQKEPGMFTLAQTEFHNNEEVENETSEEIEENEAEDSTNKDAE 730

Query: 709  DEIPSDQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVNGGVFRNYDG 530
            D +                     +EP   E P  +  +P++ ++  + +      +Y  
Sbjct: 731  DGL---------------------DEPSVPE-PNHSDDVPVFTRSGRQVIKPAHLNDY-- 766

Query: 529  YLTRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTK 350
                + + EG+  L+    E      P + +EA    +W+ A D EIK +   +TW L  
Sbjct: 767  --VLLAEIEGERLLLLINDE------PWDFKEANKYREWRDACDEEIKSIIKNRTWSLVS 818

Query: 349  LPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRTIRML 170
            LP   + IG +WV+ IKR  +G I K+KAR+VAKG+ QK   D+ + FAP A I T+R +
Sbjct: 819  LPVGIKPIGLKWVFKIKRNSDGNITKHKARLVAKGYVQKHVVDFDEVFAPVARIETVRFI 878

Query: 169  LKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLY 14
            + LA + GW+V HLDVK+AFLH  L+E VY+TQP G+    + + V KL K+LY
Sbjct: 879  IALAASNGWEVHHLDVKTAFLHGELKENVYVTQPEGFVTKGSEEKVYKLHKALY 932


>ref|XP_003376808.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trichinella spiralis] gi|316974460|gb|EFV57947.1|
            retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Trichinella spiralis]
          Length = 1324

 Score =  395 bits (1014), Expect = e-107
 Identities = 234/712 (32%), Positives = 385/712 (54%), Gaps = 10/712 (1%)
 Frame = -1

Query: 2107 EEWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQET-LPVKGYGDIILNFGSSQ-IT 1934
            ++WFLDSG  +H++   +   ++       H   +   T +  KG G + +   + + + 
Sbjct: 289  KDWFLDSGATTHLTHRDDWMEEYNGHTT--HTVAIANGTNITTKGCGVVKIPLATKKTMV 346

Query: 1933 LKDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYN---KKIVAEGSEHNGL 1763
              DV +   L  NL+S+ ++  QK  +     ENG     ++     + I+   +++NGL
Sbjct: 347  AHDVRHAPELALNLLSVSRIAAQKKTLI--FDENGCRIVDLAIEVPRQHILGTATQYNGL 404

Query: 1762 FVMKPLKTECYLTNTEISNLWHNRLGHISNVYLEKIETTVSHG-PKNPISTSKCNNCIMA 1586
            + +     +  +T  ++ +LWH RLGH+S   ++ ++   + G P + I+ + C  C+  
Sbjct: 405  YRLNRCD-QWAMTVHDVPDLWHRRLGHLSRGSMKLLQDGQATGIPSDAITKTDCVTCLKG 463

Query: 1585 KIHRKPF-KSRTRTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWCFLIK*K 1409
            K  R PF KS T+ +   LE++HSD+CGP+   +    RY L F DD+S+ ++ + +K K
Sbjct: 464  KQCRLPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFVYFLKHK 523

Query: 1408 SEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQN 1229
            +EV   F DF   V+ + + ++ CLRTDNG E+ +N F +F   KGIR E+T+P TPQQN
Sbjct: 524  NEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNNMFAEFLVRKGIRHERTIPETPQQN 583

Query: 1228 GVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFEMWYNMK 1049
            GVAER N+ L+E  R +L+ + +S   W EA  TA Y+ N  P K + + TP E W   K
Sbjct: 584  GVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALRKVTPEEAWSGRK 643

Query: 1048 PSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDV 869
            P+++HL+VFGCL   H+P   R K DPK++  I VGY ETSKGY+ +D +TKK+ V+RDV
Sbjct: 644  PNLAHLKVFGCLAMVHVPSGQRKKWDPKSEERIFVGYCETSKGYRTVDRKTKKMYVTRDV 703

Query: 868  EFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQ 689
            +F+E   P          + +      E      E   V  ++++ ST  + N   P+  
Sbjct: 704  KFLESQFPGTQASKEGSTNSLMNPDVGE------ETVIVWTSQDSGSTEMDPN---PTAP 754

Query: 688  IDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKNTFEDVNGGVFRNYDGYLTRVRK 509
            + +   S + + QN    +P  K +P + ++ PL  +N F +                 +
Sbjct: 755  LKVDTDSDKSIGQN---PQPSTKTSPEELRR-PL--RNRFPN-----------------R 791

Query: 508  NEGDTNLICCVSEIPNPEGPKNIREALSNTD---WKTAMDNEIKMLSDRKTWELTKLPKD 338
            N  +++ +   +++     P +  EA++  D   W  A++ E+    + ++WE   LP  
Sbjct: 792  NIFNSDFLLFQAQVREHSDPISYEEAVNRPDAKEWLKAINEELASHRENQSWEPAVLPPH 851

Query: 337  KEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRTIRMLLKLA 158
            K+ I  +WV+  K   +G I+K KAR+VAKG+ Q +G D++ TFAPT    ++R LL LA
Sbjct: 852  KKAIKSKWVFKTKYKEDGTIEKRKARLVAKGYSQLQGIDFEDTFAPTLGYSSLRYLLSLA 911

Query: 157  VNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGYSENLDLVCKLKKSLYGLKQ 2
                 +V  +DV +AFL+ +L EE+YM  P G  +  +  C+L+KS+YGLKQ
Sbjct: 912  AKYNLEVDQMDVVTAFLNPSLNEEIYMELPSGVGDENNKYCRLRKSIYGLKQ 963


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  394 bits (1011), Expect = e-106
 Identities = 253/733 (34%), Positives = 375/733 (51%), Gaps = 30/733 (4%)
 Frame = -1

Query: 2110 KEEWFLDSGCNSHMSGDKEIFIKFTSTC-------DGKHVRTVGQETLPVKGYGDIILNF 1952
            K+ W LDSGC SHM+  ++ FI F           D   V + GQ T+ +  +G  I   
Sbjct: 305  KDLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGTIK-- 362

Query: 1951 GSSQITLKDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYNKKIVAEGSEH 1772
                  L++V YV  LR+NLIS     T   +   +  E G+   +   N K    GS  
Sbjct: 363  -----ILENVKYVPHLRRNLIS-----TGTLDKLGYRHEGGEGKVRYFKNNKTALRGSLS 412

Query: 1771 NGLFVMKPLKTECYLTNTEISN----LWHNRLGHISNVYLEKIETTVSHGPKNPISTSKC 1604
            NGL+V+        L N E       LWH+RLGH+S   L+ +        K       C
Sbjct: 413  NGLYVLDGSTVMSELCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLIDRKEINELEFC 472

Query: 1603 NNCIMAKIHRKPFKSRTRTTSRCLEVIHSDLCG-PITPTTYNQKRYILIFSDDYSKMTWC 1427
             +C+M K  +  F     T+   L  +H+DL G P    + + K+Y L   DD ++  W 
Sbjct: 473  EHCVMGKSKKVSFNVGKHTSEDALSYVHADLWGSPNVTPSISGKQYFLSIIDDKTRKVWL 532

Query: 1426 FLIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVP 1247
            + +K K E F+ F +++  V+ + N K+ CLRTDNG EF ++ F  +C+  GI R +T  
Sbjct: 533  YFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCT 592

Query: 1246 YTPQQNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFE 1067
            YTPQQNGVAER N+ ++E +RCLL  S +   +W EAA TA Y++N  P   +    P E
Sbjct: 593  YTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVPEE 652

Query: 1066 MWYNMKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKV 887
            MW N KP   HLR FG + + H   + +GKL P+A +G  +GY   +KGYK+   E +K 
Sbjct: 653  MWLNRKPGYKHLRKFGSIAYVH---QDQGKLKPRALKGFFLGYPAGTKGYKVWLLEEEKC 709

Query: 886  IVSRDVEFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*ND 707
            ++SR+V F ++++ Y   K +E                  +  + L  KET S+  E N 
Sbjct: 710  VISRNVVF-QESVVYRDLKVKE------------------DDTDNLNQKETTSSEVEQNK 750

Query: 706  EIPSDQIDLSHSSQEVVIQNELHEEPV-QKENPVQNKKIPLWAKNTFEDVNGGVFRNYDG 530
               +       S    VIQ +   EP+ + E    +++   +++ T E         Y  
Sbjct: 751  FAEA-------SGSGGVIQLQSDSEPITEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKL 803

Query: 529  YLTRVRKN---------EGDTNLICCVSEIPNPEGPKNIREALSNTD---WKTAMDNEIK 386
               RVR+N         E        V E    + P++ +EA+ + D   W  A  +E+ 
Sbjct: 804  ARDRVRRNINPPTRFTEESSVTFALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMD 863

Query: 385  MLSDRKTWELTKLPKDKEVIGCRWVYTIKR-LPNGEIDKYKARVVAKGFHQKEGFDYKKT 209
             L    TW+L   PKD+++IGCRW++ +K  +P  E  ++KAR+VAKG+ Q+EG DY++ 
Sbjct: 864  SLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEI 923

Query: 208  FAPTANIRTIRMLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY----SENLDL 41
            FAP     +IR+L+ L V+K  ++  +DVK+ FLH +LEEE+YM QP G+    SEN   
Sbjct: 924  FAPVVKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSEN--K 981

Query: 40   VCKLKKSLYGLKQ 2
            VC+LKKSLYGLKQ
Sbjct: 982  VCRLKKSLYGLKQ 994


>emb|CAN75466.1| hypothetical protein VITISV_025054 [Vitis vinifera]
          Length = 1576

 Score =  389 bits (1000), Expect = e-105
 Identities = 251/756 (33%), Positives = 386/756 (51%), Gaps = 53/756 (7%)
 Frame = -1

Query: 2110 KEEWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSSQITL 1931
            K+ W +DSG + HM+GD  IF  ++S  +   VR        V G G ++L   S  +TL
Sbjct: 490  KKPWIVDSGASDHMTGDATIFDTYSSYPNNLTVRIADGSLSKVAGTGSVVL---SRDLTL 546

Query: 1930 KDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISY--NKKIVAEGSEHNGLFV 1757
              VL V  L  NL+S+ KL  +K  +  F      T C+     + K +    E +GL++
Sbjct: 547  NSVLLVPNLDCNLLSISKLTKEKRCITNF----SSTHCEFQDLDSGKTIGNAEECSGLYI 602

Query: 1756 MKP----------------LKTECYLTNTEISNLWHNRLGHISNVYLEKIETTVSHGPKN 1625
            +K                     C   ++ I  LWH RLGH + +YL+ +  ++ +  KN
Sbjct: 603  LKERHDPQEQPQMTVGSNSFSVSCQNNDSAI-RLWHYRLGHPNVMYLKHLFPSLFN--KN 659

Query: 1624 PISTSKCNNCIMAKIHRKPFKSRTRTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDY 1445
            P S  +C  C ++K  R  F  +    S    +IHSD+ GP         R+ + F DD+
Sbjct: 660  PQSF-ECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPSRIKNVTGTRWFVSFIDDH 718

Query: 1444 SKMTWCFLIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIR 1265
            +++TW FL+K KSE  +IF +F+  +QT+   KI  L++DN  ++ ++   +F   +GI 
Sbjct: 719  TRLTWVFLMKEKSETSQIFKNFKNMIQTQFQSKIQILKSDNARDYFNSILGEFLAQEGIV 778

Query: 1264 REQTVPYTPQQNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVA 1085
               +   TPQQNG+AERKN+ L+E+ R L+ S  +   +WG+A  TA Y++N +P + + 
Sbjct: 779  HLSSCVDTPQQNGIAERKNRHLLEVARSLMFSMNVPKLFWGQAVLTAAYLINRMPXRVLK 838

Query: 1084 QKTPFEMWYNMKPSISHL-----RVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKG 920
             +TP +      P+   +     ++FGC  F HI ++ R K+DP++ + I +GYS   KG
Sbjct: 839  FQTPCQTLLKSFPTTRLISTVPPKIFGCSVFVHINQQHRSKJDPRSLKCIFLGYSSNQKG 898

Query: 919  YKIIDEETKKVIVSRDVEFIEDNIPY----------------------ISNKPREIVSHI 806
            YK     T+K   S DV F E   PY                       S  P    +HI
Sbjct: 899  YKCYSPVTRKFYNSMDVTFFE-TXPYYPKNDIQGENSTXEYQFWDLESFSESPITTENHI 957

Query: 805  QIEGFDESE--IETPEKENVLETKETNSTRPE*NDEIPSDQIDL--SHSSQEVVIQNELH 638
              E F++ E  ++  +KE++ E  E  +   + ++  P         +++ +  + +EL 
Sbjct: 958  PPESFNQPESIVDLWDKEHIQEETEERALSQQTHEAEPGPNPSKLPGNNAPDGTVDSEL- 1016

Query: 637  EEPVQKENPVQNKKIPLWAKNTFEDVNG--GVFRNYDGYLTRVRKNEGDTNLICCVSEIP 464
                  EN + N  I  W K          G F +YD      R            S I 
Sbjct: 1017 ------ENDILNMPIA-WRKEVKSCTQHPIGNFISYDKLSPTFR---------AFTSSIT 1060

Query: 463  NPEGPKNIREALSNTDWKTAMDNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTIKRLPNG 284
              + P+NI+EA     WK A+D E++ L    TWE+T LP+ K+ +GC+W++T+K   +G
Sbjct: 1061 EIQVPQNIQEAFKYPKWKAAVDEEVRALEKNGTWEITDLPRGKKPVGCKWIFTVKYKADG 1120

Query: 283  EIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDVKSAFLH 104
             +D+YKAR+VAKGF Q  G DY++TFAP A + T+R+LL LA N  W +  LDVK+AFL+
Sbjct: 1121 NVDRYKARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAANLDWSLHQLDVKNAFLN 1180

Query: 103  RNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQ 2
             +LEEEVYM  P G   + N + VC+L+KSLYGLKQ
Sbjct: 1181 GDLEEEVYMDIPAGLETTSNFNKVCRLRKSLYGLKQ 1216


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  389 bits (998), Expect = e-105
 Identities = 255/719 (35%), Positives = 382/719 (53%), Gaps = 19/719 (2%)
 Frame = -1

Query: 2101 WFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDI-ILNFGSSQITLKD 1925
            W +DSG   HM+  +E F  +     G  V       L + G G I I  F  +  T+ +
Sbjct: 292  WLIDSGATWHMTSRREWFHTYEPISGGS-VYMGNDHALEIAGIGTIKIKMFDGTIRTIGE 350

Query: 1924 VLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYNKKIVAEGSEHNG-LFVMKP 1748
            V +V GL+KNL+SL ++ +  Y       ENG    KI     ++ +  +    LF++K 
Sbjct: 351  VRHVNGLKKNLLSLGQMDSHGYKTHV---ENG--IMKIVKGALVLMKVEKIGANLFMLKG 405

Query: 1747 LKTE----CYLTNTEISNL-WHNRLGHISNVYLEKI-ETTVSHGPKNPISTSKCNNCIMA 1586
               +    C  +N E S + WH +LGH+S   L+ + E  +  G K+ +S   C +C+ +
Sbjct: 406  ETLQEADACVASNGEESTMMWHLKLGHMSEQGLKILSERKLLPGLKS-VSLPFCEHCVTS 464

Query: 1585 KIHRKPFKSRTRTTSRC-LEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWCFLIK*K 1409
            K HR  F SR+   S+C L++IHSD+       +    +Y++ F DDYS+  W + IK K
Sbjct: 465  KQHRLKF-SRSIARSKCILDLIHSDVWES-PDISMGGAKYMVTFIDDYSRRCWVYPIKKK 522

Query: 1408 SEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQN 1229
            S+VF +F +++  V+ E   KI CLRTDNG E+T  EF  FC+ +GI+R+ TV YTPQQN
Sbjct: 523  SDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDGEFLAFCKQEGIQRQFTVAYTPQQN 582

Query: 1228 GVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFEMWYNMK 1049
            GVAER N+ L E +R +L ++ +   +W EAAKTA YI+N  P   +  KT  EMW    
Sbjct: 583  GVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKP 642

Query: 1048 PSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDV 869
               S+L  FGC  +     + R KLD K++R I +GY++  KGY++ D    K+++SRDV
Sbjct: 643  ADYSYLHAFGCPMYVMYNAQERTKLDAKSRRCIFLGYADGVKGYRLWDPTAHKIVISRDV 702

Query: 868  EFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQ 689
             F+ED                Q++  D  +    EK   +     N+  PE +D      
Sbjct: 703  IFVED----------------QLQRKDGDDGTVKEKSETVPVYVENN--PENSD------ 738

Query: 688  IDLSHSSQEVVIQNELHEEPVQKENP-----VQNKKIPLWAKNTFEDVNGGVFRNYDGYL 524
                  S E   ++E  +EPV+ E P      + ++ P W               +  Y+
Sbjct: 739  ------SSEAAPEHE-EQEPVESEAPEVRRSTRERRPPTW---------------HSEYV 776

Query: 523  TRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTD---WKTAMDNEIKMLSDRKTWELT 353
            T +       N+  C+  +     P    EAL+++D   W TAM  EI+ L   KTWEL 
Sbjct: 777  TEI-------NVAYCL--LTEDGEPSTFHEALNSSDVALWMTAMQEEIEALHKNKTWELV 827

Query: 352  KLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRTIRM 173
             LP+ ++ IG +WVY IKR  N ++++Y+AR+V KG+ QKEG D+ + F+P   + T+R+
Sbjct: 828  PLPRGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRI 887

Query: 172  LLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGYSE--NLDLVCKLKKSLYGLKQ 2
            +L +       +  LDVK+AFLH  LEEE+YM QP G++E    +LVC+L KSLYGLKQ
Sbjct: 888  VLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQ 946


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  388 bits (997), Expect = e-105
 Identities = 256/723 (35%), Positives = 382/723 (52%), Gaps = 23/723 (3%)
 Frame = -1

Query: 2101 WFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDI-ILNFGSSQITLKD 1925
            W +DSG   HM+  +E F  +     G  V       L + G G I I  F  +  T+++
Sbjct: 292  WLIDSGATWHMTSRREWFHTYEPISGGS-VYMGNDHALEIAGIGTIKIKMFDGTIRTIEE 350

Query: 1924 VLYVEGLRKNLISLYKLLTQKYNMFAFLKENG-----KTCCKISYNKKIVAEGSEHNGLF 1760
            V +V GL+KNL+SL ++ +          ENG     K    +   +KI A       LF
Sbjct: 351  VRHVNGLKKNLLSLGQMDSHGCKTHV---ENGIMKIVKGALVLMKAEKICAN------LF 401

Query: 1759 VMKPLKTE----CYLTNTEISNL-WHNRLGHISNVYLEKI-ETTVSHGPKNPISTSKCNN 1598
            ++K    +    C  +N E S + WH +LGH+S   L+ + E  +  G K+ +S   C +
Sbjct: 402  MLKGETLQEADACVASNGEESTMMWHLKLGHMSEQGLKILSERKLPPGLKS-VSLPFCEH 460

Query: 1597 CIMAKIHRKPFKSRTRTTSRC-LEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWCFL 1421
            C+ +K HR  F SR+   S+C L++IHSD+       +    +Y++ F DDYS+  W + 
Sbjct: 461  CVTSKQHRLKF-SRSIARSKCILDLIHSDVWES-PDISMGGAKYMVTFIDDYSRRCWVYP 518

Query: 1420 IK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYT 1241
            IK KS+VF +F +++  V+ E   KI CLRTDNG E+T +EF  FC+ +GI+R+ TV YT
Sbjct: 519  IKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDSEFLAFCKQEGIQRQFTVAYT 578

Query: 1240 PQQNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFEMW 1061
            PQQNGVAER N+ L E +R +L ++ +   +W EAAKTA YI+N  P   +  KT  EMW
Sbjct: 579  PQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMW 638

Query: 1060 YNMKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIV 881
                   S+L  FGC  +     + R KLDPK+++ I +GY++  KGY++ D    K+++
Sbjct: 639  TGKPADYSYLHAFGCPVYVMYNAQERTKLDPKSRKCIFLGYADGVKGYRLWDPTAHKIVI 698

Query: 880  SRDVEFIEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEI 701
            SRDV F+ED                Q++  D  +    EK   +     N+  PE +D  
Sbjct: 699  SRDVIFVED----------------QLQRKDGDDGTVKEKSETVPVYVENN--PENSD-- 738

Query: 700  PSDQIDLSHSSQEVVIQNELHEEPVQKENP-----VQNKKIPLWAKNTFEDVNGGVFRNY 536
                      S E   ++E  +EPV+ E P      + ++ P W               +
Sbjct: 739  ----------SSEAAPEHE-EQEPVESEAPEVRRSTRERRPPTW---------------H 772

Query: 535  DGYLTRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTD---WKTAMDNEIKMLSDRKT 365
              Y+T +       N+  C+  +     P    EAL++ D   W TAM  EI+ L   KT
Sbjct: 773  SEYVTEI-------NVAYCL--LTEDGEPSTFHEALNSLDVALWMTAMQEEIEALHKNKT 823

Query: 364  WELTKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIR 185
            WEL  LP  ++ IG +WVY IKR  N ++++Y+AR+V KG+ QKEG D+ + F+P   + 
Sbjct: 824  WELVPLPHGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLT 883

Query: 184  TIRMLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGYSE--NLDLVCKLKKSLYG 11
            T+R++L +       +  LDVK+AFLH  LEEE+YM QP G++E    +LVC+L KSLYG
Sbjct: 884  TVRIVLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYG 943

Query: 10   LKQ 2
            LKQ
Sbjct: 944  LKQ 946


>ref|XP_004234454.1| PREDICTED: uncharacterized protein LOC101244259 [Solanum
            lycopersicum]
          Length = 1812

 Score =  386 bits (991), Expect = e-104
 Identities = 244/733 (33%), Positives = 379/733 (51%), Gaps = 32/733 (4%)
 Frame = -1

Query: 2104 EWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYG-DIILNFGSSQIT-- 1934
            +W +DSG  +HMS         ++  D K V++    T+ +   G  ++ + GSS+I   
Sbjct: 362  KWIVDSGATNHMS------FSLSNLTDVKLVKSDYNRTVHLPNGGVTLVTHTGSSKIIDK 415

Query: 1933 --LKDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYNKKIVAEGSEHNGLF 1760
              LKDVL+V   + NL+S+ KL  + +   +F    G    +     ++   G EH+GL+
Sbjct: 416  GELKDVLFVPDFQYNLLSVSKLTREFHYFVSFYP--GFCLFQDLSTGRLKGIGKEHDGLY 473

Query: 1759 VMKP-----------LKTECYLTNTEISN--LWHNRLGHISNVYLEKIETTVSHGPKNPI 1619
             M P           + T+ +  + +  +  LWH RL H S   ++ I        K+ +
Sbjct: 474  WMVPQNSTKSESTKDMDTKGFTVHDDKRDILLWHRRLAHSSIKSVQDICGRTIDACKSVV 533

Query: 1618 STSKCNNCIMAKIHRKPFKSRTRTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSK 1439
                C  C +AK  R PF +    + R   ++H D+ GP    T++  +Y L   DDYS+
Sbjct: 534  DD--CEICPLAKQTRLPFTNIDTRSDRAFALLHLDVWGPYNTQTFDGNKYFLTIVDDYSR 591

Query: 1438 MTWCFLIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRRE 1259
            +TW FL+K K +V  +   F + V T+ N  +  +RTDNG EF +++ +   ++ GI   
Sbjct: 592  ITWIFLLKFKHDVLIVLKQFFQLVHTQFNASVQGIRTDNGGEFCNDQLQALLKDLGIVHY 651

Query: 1258 QTVPYTPQQNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQK 1079
            +T  YTPQQNGVAERK++ L+E+ R L   S +  K+WG    TA YI+N +P K +A K
Sbjct: 652  RTCAYTPQQNGVAERKHRHLLEVARALRFQSGVPLKFWGHCILTAVYIINRLPSKVLAGK 711

Query: 1078 TPFEMWYNMKPSISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEE 899
            +P+E+++N+KPS+ H R FGCLC+  I  ++  K   +A + + +GYS  +KGY + D E
Sbjct: 712  SPYEVFFNIKPSLIHSRTFGCLCYASILPKV-DKFAARAVKAVFMGYSGVTKGYILFDLE 770

Query: 898  TKKVIVSRDVEFIEDNIPYISNKPREIVSHIQIEGFDES------EIETPEKENVLETKE 737
             ++  ++RDV F E   P+  +   +        G D           TP    +  T  
Sbjct: 771  RQRFFLNRDVVFHEYQFPFKESSSFDASITANDAGIDNDVFTYPITYSTPNSPTIYSTPS 830

Query: 736  TNSTR-PE*NDEIPSDQIDLSHSSQEVVIQNELHEEPVQKENPVQNKKIPLWAKN--TFE 566
            T S+  P  ND +P     +SH+S            P+++ N  ++   PLW  +  T  
Sbjct: 831  TTSSHTPSTNDSLP----PVSHTS-----------APIRRSN--RHSHPPLWLADYVTRP 873

Query: 565  DVNGGVF--RNYDGYLTRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAMDNE 392
                 ++   NY  Y      ++    +   + E      P   +EA+ ++ W  AM +E
Sbjct: 874  APTSTLYPLSNYVSYTNLSSSHQHYLGVFSAIIE------PSTYQEAIKDSRWIDAMQSE 927

Query: 391  IKMLSDRKTWELTKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKK 212
            I+ L D  TWEL  LP  K  IGCRWVY +K   NG+I+++K R+VAKG+ QKEG D+ +
Sbjct: 928  IQALHDNHTWELVPLPPGKVPIGCRWVYKVKLKSNGDIERFKTRLVAKGYTQKEGLDFHE 987

Query: 211  TFAPTANIRTIRMLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGYS---ENLDL 41
            TF+P   + T+R +L LA    W +  LDV + FLH +L +EVYM  P G+S   E+  L
Sbjct: 988  TFSPVVKMTTVRTVLSLAAQFNWHIHQLDVYNVFLHSDLHDEVYMQLPEGFSSQGESNGL 1047

Query: 40   VCKLKKSLYGLKQ 2
            VC+L KSLYGLKQ
Sbjct: 1048 VCRLVKSLYGLKQ 1060


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  385 bits (989), Expect = e-104
 Identities = 245/738 (33%), Positives = 364/738 (49%), Gaps = 38/738 (5%)
 Frame = -1

Query: 2101 WFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSSQITLKDV 1922
            W LDSG + H+  D      F      + V+     +  V   G +     S+Q  L +V
Sbjct: 405  WILDSGASDHIVCDSSFLTSFQPV-HNRIVKLPDGTSAHVSHIGTVSF---SAQFVLHNV 460

Query: 1921 LYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKIS--YNKKIVAEGSEHNGLFVMK- 1751
            L V     NLIS+ KL    + +  FL++     C I    + K++  G+E  GL+ +  
Sbjct: 461  LCVPLFYLNLISISKLAFDSFYVTIFLRQ----VCFIQDLQSGKMIGMGTESEGLYCLNL 516

Query: 1750 PLKTECYLTNTEISNLWHNRLGHISNVYLEKIETTVSHGPKNPISTSKCNNCIMAKIHRK 1571
            P K  C + NT+  +LWH RLGH S+    K+           +  S C+ C +AK  R 
Sbjct: 517  PRKGTCNVVNTKTQDLWHQRLGHPSS----KVSVLFPFLQNKTLDVSTCSICPLAKHTRT 572

Query: 1570 PFKSRTRTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWCFLIK*KSEVFEI 1391
            PF     ++  C ++IH D+ G     + +  +Y L   DD+S+ TW +L+  KSE   +
Sbjct: 573  PFPLSVSSSDSCFDLIHVDIWGGYHVPSLSGAQYFLTIVDDHSRSTWVYLMHHKSEARSL 632

Query: 1390 FIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNGVAERK 1211
             + F   V  +   ++  +R+DNG EF   +  QF  ++GI  + +   TPQQNGV ERK
Sbjct: 633  LVHFVNLVANQFGSQVKIVRSDNGPEF---KHTQFYSSRGILHQTSCINTPQQNGVVERK 689

Query: 1210 NQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFEMWYNMKPSISHL 1031
            ++ L+ + R LL  S +   +WG+A  TA Y++N  P   +  KTPFE  ++  P+ SHL
Sbjct: 690  HRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQGKTPFEKLFHKSPNYSHL 749

Query: 1030 RVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIEDN 851
            RVFGC CF         K DP++   + +GY    KGYK+   + KK ++SRDV F E  
Sbjct: 750  RVFGCRCFVSTHPLRPSKFDPRSIESVFIGYPHGQKGYKVYSLKDKKXLISRDVTFFETE 809

Query: 850  IPY---ISNKPREIVSHI----QIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSD 692
             PY   +S     + +      Q    D+  I      + L+   T+S      D  P  
Sbjct: 810  FPYQNXLSTTSPSLDTFFPSLPQTPDIDDDHISFNHSGSNLQPSATSSV-----DXHPQP 864

Query: 691  QIDLSHSSQEV--------------VIQNELHEEPVQKENPVQNKKI------------- 593
             +D SHSS  V              VI      +P +   P +                 
Sbjct: 865  TLDNSHSSSHVDPPSSPPSLNTSPPVISQPSPSQPRRSSRPTKTPTTLQDFHIEAALPSR 924

Query: 592  PLWAKNTFEDVNGGVFRNYDGYLTRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDW 413
            P+   +T E  + G   +    L+  R +           +I   + P++  +A+ ++ W
Sbjct: 925  PVPPSSTSEVAHSGTIHSLSQVLSYDRLSPMHK---AFTVKITLAKEPRSFSQAVLDSRW 981

Query: 412  KTAMDNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQK 233
            + AM+ EI+ L   KTW L  LP  K+ IGC+WVY IK  P+G I++YKAR+VAKGF Q 
Sbjct: 982  REAMNTEIQALQANKTWSLVPLPSHKKPIGCKWVYKIKYNPDGTIERYKARLVAKGFSQV 1041

Query: 232  EGFDYKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGYSE 53
            EG DY++TFAP A + T+R+LL LA  +GW +  LDV +AFL+ +L E+VYM  PPG+  
Sbjct: 1042 EGIDYRETFAPVAKLTTVRVLLSLASIQGWHLHQLDVNNAFLNGDLYEDVYMQLPPGFGR 1101

Query: 52   NLD-LVCKLKKSLYGLKQ 2
              +  VCKL KSLYGLKQ
Sbjct: 1102 KGEHRVCKLHKSLYGLKQ 1119


>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
          Length = 1493

 Score =  385 bits (988), Expect = e-104
 Identities = 248/751 (33%), Positives = 385/751 (51%), Gaps = 51/751 (6%)
 Frame = -1

Query: 2101 WFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSSQITLKDV 1922
            W +DSG + HM+    +F  ++       V+       PV G G I +   S  ITL  V
Sbjct: 414  WIVDSGASDHMTDAHHLFSTYSPCAGNLKVKIADGTLSPVAGKGSIRI---SESITLNPV 470

Query: 1921 LYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYNKKIVAEGSEHNGLFVM---- 1754
            L+V  L  NL+S+ +L T+K N  A    +      +S  K I     E  GL+      
Sbjct: 471  LHVPNLSCNLLSISQL-TKKSNCSAKFLSSHCVFQDLSSGKTI-GSAKEREGLYYFDETD 528

Query: 1753 ---KPLKTECYLTNTEISN---LWHNRLGHISNVYLEKIETTVSHGPKNPISTSKCNNCI 1592
               +   T C  T+    +   LWH R+GH S  YL+ +  ++       I   +C  C 
Sbjct: 529  VLGQSSPTVCNSTSYSKDSELLLWHKRMGHPSFQYLKHLFPSLCSN--KTILDFQCEVCE 586

Query: 1591 MAKIHRKPFKSRTRTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWCFLIK* 1412
            +AK HR  F       S    +IHSDL GP        K++ + F DD++++ W +L+  
Sbjct: 587  LAKHHRTSFPKSKYKPSIPFTLIHSDLWGPSRTPNRTHKKWFITFIDDHTRLCWVYLLTD 646

Query: 1411 KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQ 1232
            K+EV  +F++F   +QT+ + KI  LRTDNGTE+ ++    + +  GI  + +   TPQQ
Sbjct: 647  KTEVRSVFMNFHYMIQTQFHTKIQILRTDNGTEYFNHSLSTYLQENGIIHQSSCVDTPQQ 706

Query: 1231 NGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFEMWYNM 1052
            NGVAERKN+ ++E+ R LL SS + T++WG++  TATY++N +P + ++  TP + ++  
Sbjct: 707  NGVAERKNRHILEVARALLFSSHMPTQFWGDSILTATYLINRMPSRVLSFVTPLQKFHEF 766

Query: 1051 KPSI---SHL--RVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKV 887
             P     +HL  RVFG   F HI    R K DP+A + + +GYS T KGYK  D  ++K+
Sbjct: 767  FPHSRLDAHLPLRVFGSTVFVHIHGPKRNKFDPRALKXVFLGYSSTQKGYKCYDPISQKL 826

Query: 886  IVSRDVEFI------------------------------EDNIPYISNKPREIVSHIQIE 797
             VS DV F                               E    +ISN       H+ + 
Sbjct: 827  YVSLDVTFFXHTPYYSLQGESMSETRPSLTSDYLDVAMFESTPCFISNPSHNTEGHLNLG 886

Query: 796  GFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDLSHSSQEVVI----QNELHEEP 629
            G  + E++T  +E ++ ++   S   + N+ + S+ +     S+ V++    + + + + 
Sbjct: 887  G--DMELQT-NRETLVYSRRPKS---KFNETLISEALQ---ESESVIVPTPREYDFNSDQ 937

Query: 628  VQKENPVQNKKIPLWAKNTFEDVNGGVFRNYDGYLTRVRKNEGDTNLICCVSEIPNPEGP 449
            V  + P+  +K P     T   ++  V  +Y+    + R            + +   + P
Sbjct: 938  VTDDLPIAIRKQP--RSCTLHPISNXV--SYNSLSAKCR---------AFTTNLDRIQLP 984

Query: 448  KNIREALSNTDWKTAMDNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTIKRLPNGEIDKY 269
            KNI+EA    +WK A+  EI+ L   +TWE+  LP+ K+ +GC+W++T+K   +G +++Y
Sbjct: 985  KNIQEAFEIPEWKEAVMEEIRALEKNETWEVMNLPRGKKPVGCKWIFTVKYKADGTVERY 1044

Query: 268  KARVVAKGFHQKEGFDYKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDVKSAFLHRNLEE 89
            KAR+VAKGF Q  G DY +TFAP A + TIR+LL LA N  W +   D+K+AFL+  LEE
Sbjct: 1045 KARLVAKGFTQTYGIDYTETFAPVAKLNTIRVLLSLAANLDWPLHQFDIKNAFLNGELEE 1104

Query: 88   EVYMTQPPGY--SENLDLVCKLKKSLYGLKQ 2
            EV+M  PPG+   E    VCKLKKSLYGLKQ
Sbjct: 1105 EVFMMLPPGFCKEEEETRVCKLKKSLYGLKQ 1135


>emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]
          Length = 1636

 Score =  384 bits (987), Expect = e-104
 Identities = 245/735 (33%), Positives = 380/735 (51%), Gaps = 31/735 (4%)
 Frame = -1

Query: 2113 QKEEWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSSQIT 1934
            +K+ W +DSG + HM+GD  IF  ++S  +   VR        V G G ++L   S  +T
Sbjct: 374  RKKPWIVDSGASDHMTGDATIFDTYSSCPNNLTVRIADGSLSKVAGTGSVVL---SRDLT 430

Query: 1933 LKDVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISY--NKKIVAEGSEHNGLF 1760
            L  VL V  L  NL+S+ KL  +K  +  F      T C+     + K +    E +GL+
Sbjct: 431  LNFVLLVPNLDCNLLSISKLTKEKRCITNF----SSTHCEFQDLDSGKTIGNAEECSGLY 486

Query: 1759 VMKP----------------LKTECYLTNTEISNLWHNRLGHISNVYLEKIETTVSHGPK 1628
            ++K                     C   ++ I  LWH RLGH + +YL+ +  ++ +  K
Sbjct: 487  ILKERHDPQEQPQMTVGSNSFSVSCQNNDSAI-RLWHYRLGHPNVMYLKHLFPSLFN--K 543

Query: 1627 NPISTSKCNNCIMAKIHRKPFKSRTRTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDD 1448
            NP S  +C  C ++K  R  F  +    S    +IHSD+ GP         R+ + F DD
Sbjct: 544  NPKSF-ECEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPSRIKNVTGTRWFVSFIDD 602

Query: 1447 YSKMTWCFLIK*KSEVFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGI 1268
            ++++TW FL+K KSE  +IF +F+  +QT+   KI  L++DN  ++ ++   +F   +G+
Sbjct: 603  HTRLTWVFLMKEKSETSQIFKNFKNMIQTQFQSKIQILKSDNARDYFNSILGEFLAQEGL 662

Query: 1267 RREQTVPYTPQQNGVAERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEV 1088
                +   TPQQNG+AERKN+ L+E++R L+ S  +   +WG+A  TA Y++N +P + +
Sbjct: 663  VHLSSCVDTPQQNGIAERKNRHLLEVVRSLMFSMNVPKLFWGQAVLTAAYLINRMPSRVL 722

Query: 1087 AQKTPFEMWYNMKPSISHL-----RVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSK 923
              +TP +      P+   +     ++FGC  F HI ++ R KLDP++ + I +GYS   K
Sbjct: 723  KFQTPCQTLLKSFPTTRLISTVPPKIFGCSVFVHINQQHRSKLDPRSLKCIFLGYSSKQK 782

Query: 922  GYKIIDEETKKVIVSRDVEFIEDNIPYISN-----KPREIVSHIQIEGFDESEIETPEKE 758
            GYK     T+K   S DV F E    Y  N        +      +E F ES I T   E
Sbjct: 783  GYKCYSPVTRKFYNSMDVTFFETQPYYPKNDIQGENSTQEYQFWDLESFSESPITT---E 839

Query: 757  NVLETKETNSTRPE*NDEIPSDQIDLSHSSQEVVIQNELHE-EPVQKENPVQNKKIPLWA 581
            N +  K  N  +PE   ++  D+  +   ++E  +  + HE EP    + +     P   
Sbjct: 840  NHIPPKSFN--QPEFIVDL-WDKEHIQEETEERALSQQTHEAEPGPNPSKLPGNNAP--- 893

Query: 580  KNTFEDVNGGVFRNYDGYLTRVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWKTAM 401
                           DG +                S+I   + P+NI+EA     WK  +
Sbjct: 894  ---------------DGIVD---------------SDITEIQVPQNIQEAFKYPKWKAVV 923

Query: 400  DNEIKMLSDRKTWELTKLPKDKEVIGCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFD 221
            + E++ L    TWE+T LP+ K+++GC+W++T+K   +G +D+YKAR+VAKGF Q  G D
Sbjct: 924  NEEVRALEKNGTWEITDLPRGKKLVGCKWIFTVKYKADGNVDRYKARLVAKGFTQSYGID 983

Query: 220  YKKTFAPTANIRTIRMLLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENL 47
            Y++TFAP A + T+R+LL LA N  W +  LDVK+AFL+ +LEEEVYM  P G   + N 
Sbjct: 984  YQETFAPVAKLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIPAGLETTSNF 1043

Query: 46   DLVCKLKKSLYGLKQ 2
            + VC+L+KSLYGLKQ
Sbjct: 1044 NKVCRLRKSLYGLKQ 1058


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  384 bits (985), Expect = e-103
 Identities = 243/710 (34%), Positives = 371/710 (52%), Gaps = 10/710 (1%)
 Frame = -1

Query: 2101 WFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDIILNFGSSQI-TLKD 1925
            W +DSG   HM+  ++ F  +    +G +V       L + G G + +      I TL++
Sbjct: 291  WIVDSGATWHMTPRRDWFCTYEPVSEG-NVFMGNDHALEIVGIGTVKIKMYDGTIRTLQE 349

Query: 1924 VLYVEGLRKNLISLYKL--LTQKYNMFAFLKENGKTCCKISYNKKIVAEGSEHNGLFVMK 1751
            V +V+ L KNL+S+ +L  L  KY++   + +  K    +   KK+ A      G     
Sbjct: 350  VRHVKELAKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVVMKAKKVAANLYMLLGDTWQM 409

Query: 1750 PLKTECYLTNTEISNLWHNRLGHISNVYLEKI-ETTVSHGPKNPISTSKCNNCIMAKIHR 1574
               +    +  E + +WH RLGH+S   L+ + E  +  G K+ +S   C +C+++K HR
Sbjct: 410  ADASVAVGSQEETTMMWHRRLGHMSERGLKVLAERNLIPGLKS-VSLPFCEHCVISKQHR 468

Query: 1573 KPFKSRTRTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTWCFLIK*KSEVFE 1394
              F   T  +   L++IHSD+       +    +Y + F DDYS+  W + IK KS V+ 
Sbjct: 469  LKFAKSTARSKHILDLIHSDVWES-PEVSIGGAKYFVSFIDDYSRRLWVYPIKKKSGVYS 527

Query: 1393 IFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNGVAER 1214
            +F +F+ +V+ E   +I CLRTDNG E+T  +F  FC+ +GI R+ TV +TPQQNGVAER
Sbjct: 528  VFKEFKAQVELETGKRIKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAER 587

Query: 1213 KNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFEMWYNMKPSISH 1034
             N+ L+E  R +L ++ ++  +W EAAKTA Y++N  P   +  KTP EMW       S 
Sbjct: 588  MNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSS 647

Query: 1033 LRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEFIED 854
            LRVFGC  +     + R KLDPK++R   +GY++  KGY++ D   +K+ VSRDV F+E+
Sbjct: 648  LRVFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVEN 707

Query: 853  NIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQIDLSH 674
             +                           E++N   TKET +   E      + + +  H
Sbjct: 708  EL-------------------------QKEQKNDGTTKETATVEIEEKSGEENSEAEPEH 742

Query: 673  SSQEVVIQNELHE-EPVQKENPVQNKKIPLWAKNTFEDVNGGVFRNYDGYLTRVRKNEGD 497
              QE    NE+++ EP +    ++    P W           V  ++D Y          
Sbjct: 743  EEQE---PNEVNDAEPRRTTRQIRK---PSWHSEY-------VMASHDAY---------- 779

Query: 496  TNLICCVSEIPNPEGPKNIREALSNTD---WKTAMDNEIKMLSDRKTWELTKLPKDKEVI 326
                C +SE      P    EA++ +D   W  AM  EI+ L    TWEL +LPK ++ I
Sbjct: 780  ----CLLSE---DGEPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVELPKGRKAI 832

Query: 325  GCRWVYTIKRLPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRTIRMLLKLAVNKG 146
            G +WV+ IKR  N ++++Y+AR+V KG+ QKEG D+ + F+P   + TIR++L +     
Sbjct: 833  GNKWVFKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFE 892

Query: 145  WDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQ 2
              +  LDVK+AFLH  LEEE+YM QP G+   E  +LVC+L KSLYGLKQ
Sbjct: 893  LHLEQLDVKTAFLHGELEEEIYMLQPEGFEEKERENLVCRLTKSLYGLKQ 942


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score =  384 bits (985), Expect = e-103
 Identities = 248/719 (34%), Positives = 375/719 (52%), Gaps = 18/719 (2%)
 Frame = -1

Query: 2104 EWFLDSGCNSHMSGDKEIFIKFTSTCDGKHVRTVGQETLPVKGYGDI-ILNFGSSQITLK 1928
            EW LD+GC+ HM+  K+ F  F     G +V+       PVKG G I I N   SQ+ L 
Sbjct: 284  EWVLDTGCSFHMTPRKDWFKDFKELSSG-YVKMGNDTYSPVKGIGSIKIRNSDGSQVILT 342

Query: 1927 DVLYVEGLRKNLISLYKLLTQKYNMFAFLKENGKTCCKISYNKKIVAEGSEHNGLFVMKP 1748
            DV Y+  + +NLISL  L  +      F  ++G    KI      + +G + + L+++  
Sbjct: 343  DVRYMPNMTRNLISLGTLEDRGC---WFKSQDG--ILKIVKGCSTILKGQKRDTLYILDG 397

Query: 1747 LKTECYL-TNTEISN---LWHNRLGHISNVYLEKIETTVSHGPKNPISTSKCNNCIMAKI 1580
            +  E    ++ E+ +   LWH+RLGH+S   +E +        +       C +C+  K 
Sbjct: 398  VTEEGESHSSAEVKDETALWHSRLGHMSQKGMEILVKKGCLRREVIKELEFCEDCVYGKQ 457

Query: 1579 HRKPFKSRTRTTSRCLEVIHSDLCG-PITPTTYNQKRYILIFSDDYSKMTWCFLIK*KSE 1403
            HR  F      T   L  +HSDL G P  P +    +Y + F DDYS+  W + ++ K E
Sbjct: 458  HRVSFAPAQHVTKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRKKDE 517

Query: 1402 VFEIFIDFQKKVQTERNLKIACLRTDNGTEFTSNEFKQFCENKGIRREQTVPYTPQQNGV 1223
             FE F++++K V+ + + K+  LRTDNG E+ ++ F++FC+ +GI R +T  YTPQQNG+
Sbjct: 518  AFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQNGI 577

Query: 1222 AERKNQMLIEMMRCLLVSSQISTKWWGEAAKTATYILNLIPRKEVAQKTPFEMWYNMKPS 1043
            AER N+ +++ +R +L  S +  K+W EAA TA Y++N  P   +    P E W    P 
Sbjct: 578  AERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWTGALPD 637

Query: 1042 ISHLRVFGCLCFYHIPKELRGKLDPKAKRGIMVGYSETSKGYKIIDEETKKVIVSRDVEF 863
            +S LR FGCL + H     +GKL+P++K+GI   Y E  KGYK+   E KK ++SR+V F
Sbjct: 638  LSSLRKFGCLAYIHAD---QGKLNPRSKKGIFTSYPEGVKGYKVWVLEDKKCVISRNVIF 694

Query: 862  IEDNIPYISNKPREIVSHIQIEGFDESEIETPEKENVLETKETNSTRPE*NDEIPSDQ-- 689
                        RE V    ++G  ++ I   + E++          P+ ND+  +DQ  
Sbjct: 695  ------------REQVMFKDLKGDSQNTISESDLEDL-------RVNPDMNDQEFTDQGG 735

Query: 688  --IDLSHSSQEVVIQNELHEEPV--QKENPVQNKKIPLWAKNTFEDVNGGVFRNYDGYLT 521
               D S+ S+     N +   P   Q E   +     +   +T++ V   V R       
Sbjct: 736  ATQDNSNPSEATTSHNPVLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIK---A 792

Query: 520  RVRKNEGDTNLICCVSEIPNPEGPKNIREALSNTDWK---TAMDNEIKMLSDRKTWELTK 350
              + NE +       SE      PK+ +EAL + DW+    AM  E+  +S   TW+L  
Sbjct: 793  NPKYNESNMVGFAYYSEDDGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVT 852

Query: 349  LPKDKEVIGCRWVYTIKR-LPNGEIDKYKARVVAKGFHQKEGFDYKKTFAPTANIRTIRM 173
             P+  ++IGCRWV+T K  +P  E  ++ AR+VAKGF QKEG DY + F+P     +IR 
Sbjct: 853  KPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRY 912

Query: 172  LLKLAVNKGWDVFHLDVKSAFLHRNLEEEVYMTQPPGY--SENLDLVCKLKKSLYGLKQ 2
            LL + V+   ++  +DVK+AFLH  LEEE+YM QP G+      + VC LK+SLYGLKQ
Sbjct: 913  LLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQ 971