BLASTX nr result
ID: Ephedra28_contig00001119
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00001119
(678 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT17346.1| Photosystem II 10 kDa polypeptide, chloroplastic ... 115 2e-23
ref|NP_001134061.1| Photosystem II 10 kDa polypeptide, chloropla... 115 2e-23
ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide... 115 2e-23
gb|ABC02754.1| PS II 10 kDa protein [Phyllostachys edulis] 114 3e-23
gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza] 114 4e-23
gb|ABF74605.1| chloroplast photosystem II 10 kDa protein [Agave ... 113 6e-23
sp|Q40070.1|PSBR_HORVU RecName: Full=Photosystem II 10 kDa polyp... 112 8e-23
gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like pr... 112 1e-22
gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like pr... 112 1e-22
ref|XP_003557640.1| PREDICTED: LOW QUALITY PROTEIN: photosystem ... 112 1e-22
ref|XP_002459340.1| hypothetical protein SORBIDRAFT_02g002830 [S... 112 1e-22
gb|AAB46718.1| photosystem II 10 kDa polypeptide [Oryza sativa I... 111 2e-22
ref|NP_001061210.1| Os08g0200300 [Oryza sativa Japonica Group] g... 111 2e-22
ref|NP_001058886.1| Os07g0147500 [Oryza sativa Japonica Group] g... 111 2e-22
gb|EEE68207.1| hypothetical protein OsJ_26372 [Oryza sativa Japo... 111 2e-22
gb|EEE66565.1| hypothetical protein OsJ_23088 [Oryza sativa Japo... 111 2e-22
gb|ABR25525.1| photosystem ii 10 kDa polypeptide [Oryza sativa I... 111 2e-22
gb|EAZ05938.1| hypothetical protein OsI_28175 [Oryza sativa Indi... 111 2e-22
ref|XP_006659205.1| PREDICTED: photosystem II 10 kDa polypeptide... 111 2e-22
dbj|BAJ85741.1| predicted protein [Hordeum vulgare subsp. vulgar... 111 2e-22
>gb|EMT17346.1| Photosystem II 10 kDa polypeptide, chloroplastic [Aegilops
tauschii]
Length = 140
Score = 115 bits (287), Expect = 2e-23
Identities = 52/60 (86%), Positives = 55/60 (91%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
F DKYGANVDGYSPIYTPEEWS GDVYVGGKTGL +WAITL G+L+GGALLVYNTSALA
Sbjct: 80 FADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAITLAGILLGGALLVYNTSALA 139
>ref|NP_001134061.1| Photosystem II 10 kDa polypeptide, chloroplast [Salmo salar]
gi|209730436|gb|ACI66087.1| Photosystem II 10 kDa
polypeptide, chloroplast precursor [Salmo salar]
Length = 138
Score = 115 bits (287), Expect = 2e-23
Identities = 51/60 (85%), Positives = 56/60 (93%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
F +KYGANVDGYSPIYTPEEWS GGDVYVGGKTGL +WA+TL G+L+GGALLVYNTSALA
Sbjct: 78 FANKYGANVDGYSPIYTPEEWSPGGDVYVGGKTGLFLWAVTLAGILLGGALLVYNTSALA 137
>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
vinifera] gi|147789486|emb|CAN71762.1| hypothetical
protein VITISV_021149 [Vitis vinifera]
gi|296082806|emb|CBI21811.3| unnamed protein product
[Vitis vinifera]
Length = 139
Score = 115 bits (287), Expect = 2e-23
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+P+EWS GGDVYVGG TGLLIWA+TL G+L+GGALLVYNTSALA
Sbjct: 79 FVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVTLAGLLLGGALLVYNTSALA 138
>gb|ABC02754.1| PS II 10 kDa protein [Phyllostachys edulis]
Length = 130
Score = 114 bits (285), Expect = 3e-23
Identities = 54/61 (88%), Positives = 56/61 (91%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+PEEWS GDVYVGG TGLLIWAITL G+L GGALLVYNTSALA
Sbjct: 70 FVDKYGANVDGYSPIYSPEEWSPSGDVYVGGTTGLLIWAITLAGLLGGGALLVYNTSALA 129
Query: 182 G 184
G
Sbjct: 130 G 130
>gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
Length = 138
Score = 114 bits (284), Expect = 4e-23
Identities = 52/60 (86%), Positives = 56/60 (93%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+P+EWS GDVYVGGKTGLLIWA+TL G+L GGALLVYNTSALA
Sbjct: 78 FVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAVTLAGLLAGGALLVYNTSALA 137
>gb|ABF74605.1| chloroplast photosystem II 10 kDa protein [Agave tequilana]
Length = 144
Score = 113 bits (282), Expect = 6e-23
Identities = 53/60 (88%), Positives = 55/60 (91%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+PEEWS GDVYVGG TGLLIWAITL G+L GGALLVYNTSALA
Sbjct: 84 FVDKYGANVDGYSPIYSPEEWSPSGDVYVGGTTGLLIWAITLAGLLAGGALLVYNTSALA 143
>sp|Q40070.1|PSBR_HORVU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor gi|1321868|emb|CAA66373.1| 10kD PSII
protein [Hordeum vulgare] gi|326521128|dbj|BAJ96767.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532058|dbj|BAK01405.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 138
Score = 112 bits (281), Expect = 8e-23
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
F DKYGANVDGYSPIYTPEEWS GDVYVGGKTGL +WA+TL G+L+GGALLVY+TSALA
Sbjct: 78 FADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVTLAGILLGGALLVYSTSALA 137
>gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza] gi|339716046|gb|AEJ88270.1| putative
chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 112 bits (280), Expect = 1e-22
Identities = 52/60 (86%), Positives = 55/60 (91%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+P+EWS GDVYVGGKTGLLIWA TL G+L GGALLVYNTSALA
Sbjct: 78 FVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAATLAGLLAGGALLVYNTSALA 137
>gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza] gi|351066200|gb|AEQ39074.1| putative
chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 112 bits (280), Expect = 1e-22
Identities = 52/60 (86%), Positives = 55/60 (91%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+P+EWS GDVYVGGKTGLLIWA TL G+L GGALLVYNTSALA
Sbjct: 78 FVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAATLAGLLAGGALLVYNTSALA 137
>ref|XP_003557640.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II 10 kDa polypeptide,
chloroplastic-like [Brachypodium distachyon]
Length = 138
Score = 112 bits (279), Expect = 1e-22
Identities = 50/60 (83%), Positives = 56/60 (93%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
F +KYGANVDGYSPIYTPEEWS GDVYVGGKTGL +WA+TLTG+L+GGALLVY+TSALA
Sbjct: 78 FSNKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVTLTGILLGGALLVYSTSALA 137
>ref|XP_002459340.1| hypothetical protein SORBIDRAFT_02g002830 [Sorghum bicolor]
gi|241922717|gb|EER95861.1| hypothetical protein
SORBIDRAFT_02g002830 [Sorghum bicolor]
Length = 137
Score = 112 bits (279), Expect = 1e-22
Identities = 49/60 (81%), Positives = 55/60 (91%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
F +KYGANVDGYSPIY PEEWS GDVYVGGKTGLL+WA+TL G+L+GGALL+YNTSALA
Sbjct: 77 FANKYGANVDGYSPIYNPEEWSPSGDVYVGGKTGLLLWAVTLAGILLGGALLIYNTSALA 136
>gb|AAB46718.1| photosystem II 10 kDa polypeptide [Oryza sativa Indica Group]
Length = 126
Score = 111 bits (278), Expect = 2e-22
Identities = 52/61 (85%), Positives = 55/61 (90%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+PEEWS GD YVGG TGLLIWA+TL G+L GGALLVYNTSALA
Sbjct: 66 FVDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 125
Query: 182 G 184
G
Sbjct: 126 G 126
>ref|NP_001061210.1| Os08g0200300 [Oryza sativa Japonica Group]
gi|38636958|dbj|BAD03219.1| putative photosystem II 10K
protein [Oryza sativa Japonica Group]
gi|113623179|dbj|BAF23124.1| Os08g0200300 [Oryza sativa
Japonica Group] gi|215740428|dbj|BAG97084.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215768077|dbj|BAH00306.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 130
Score = 111 bits (278), Expect = 2e-22
Identities = 52/61 (85%), Positives = 55/61 (90%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+PEEWS GD YVGG TGLLIWA+TL G+L GGALLVYNTSALA
Sbjct: 70 FVDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 129
Query: 182 G 184
G
Sbjct: 130 G 130
>ref|NP_001058886.1| Os07g0147500 [Oryza sativa Japonica Group]
gi|22831113|dbj|BAC15975.1| putative photosystem II 10
kD polypeptide [Oryza sativa Japonica Group]
gi|50509251|dbj|BAD30534.1| putative photosystem II 10
kD polypeptide [Oryza sativa Japonica Group]
gi|113610422|dbj|BAF20800.1| Os07g0147500 [Oryza sativa
Japonica Group] gi|215692793|dbj|BAG88237.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218199086|gb|EEC81513.1| hypothetical protein
OsI_24891 [Oryza sativa Indica Group]
Length = 137
Score = 111 bits (278), Expect = 2e-22
Identities = 50/60 (83%), Positives = 56/60 (93%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
F +KYGANVDGYSPIYTPEEWS+ GDVYVGGK GLL+WAITL G+L+GGA+LVYNTSALA
Sbjct: 78 FSNKYGANVDGYSPIYTPEEWSSTGDVYVGGKAGLLLWAITLAGILVGGAILVYNTSALA 137
>gb|EEE68207.1| hypothetical protein OsJ_26372 [Oryza sativa Japonica Group]
Length = 149
Score = 111 bits (278), Expect = 2e-22
Identities = 52/61 (85%), Positives = 55/61 (90%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+PEEWS GD YVGG TGLLIWA+TL G+L GGALLVYNTSALA
Sbjct: 89 FVDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 148
Query: 182 G 184
G
Sbjct: 149 G 149
>gb|EEE66565.1| hypothetical protein OsJ_23088 [Oryza sativa Japonica Group]
Length = 137
Score = 111 bits (278), Expect = 2e-22
Identities = 50/60 (83%), Positives = 56/60 (93%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
F +KYGANVDGYSPIYTPEEWS+ GDVYVGGK GLL+WAITL G+L+GGA+LVYNTSALA
Sbjct: 78 FSNKYGANVDGYSPIYTPEEWSSTGDVYVGGKAGLLLWAITLAGILVGGAILVYNTSALA 137
>gb|ABR25525.1| photosystem ii 10 kDa polypeptide [Oryza sativa Indica Group]
Length = 128
Score = 111 bits (278), Expect = 2e-22
Identities = 52/61 (85%), Positives = 55/61 (90%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+PEEWS GD YVGG TGLLIWA+TL G+L GGALLVYNTSALA
Sbjct: 68 FVDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 127
Query: 182 G 184
G
Sbjct: 128 G 128
>gb|EAZ05938.1| hypothetical protein OsI_28175 [Oryza sativa Indica Group]
Length = 130
Score = 111 bits (278), Expect = 2e-22
Identities = 52/61 (85%), Positives = 55/61 (90%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+PEEWS GD YVGG TGLLIWA+TL G+L GGALLVYNTSALA
Sbjct: 70 FVDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 129
Query: 182 G 184
G
Sbjct: 130 G 130
>ref|XP_006659205.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
[Oryza brachyantha]
Length = 126
Score = 111 bits (277), Expect = 2e-22
Identities = 51/61 (83%), Positives = 55/61 (90%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIY+PEEWS GD YVGG TGLLIWA+TL G+L GGALLVYNTSAL+
Sbjct: 66 FVDKYGANVDGYSPIYSPEEWSPSGDTYVGGTTGLLIWAVTLAGLLGGGALLVYNTSALS 125
Query: 182 G 184
G
Sbjct: 126 G 126
>dbj|BAJ85741.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510039|dbj|BAJ87236.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 127
Score = 111 bits (277), Expect = 2e-22
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +2
Query: 2 FVDKYGANVDGYSPIYTPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 181
FVDKYGANVDGYSPIYTPEEWS GD Y GG TGLLIWA+TL G+L GGALLVYNTSALA
Sbjct: 67 FVDKYGANVDGYSPIYTPEEWSESGDRYAGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 126
Query: 182 G 184
G
Sbjct: 127 G 127