BLASTX nr result
ID: Ephedra28_contig00001075
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00001075
(411 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31475.3| unnamed protein product [Vitis vinifera] 79 6e-13
ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6... 79 6e-13
emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-b... 78 1e-12
ref|XP_006345801.1| PREDICTED: chlorophyll a-b binding protein 6... 78 1e-12
ref|XP_006345799.1| PREDICTED: chlorophyll a-b binding protein 6... 78 1e-12
ref|XP_006436282.1| hypothetical protein CICLE_v10032568mg [Citr... 78 1e-12
ref|XP_004239673.1| PREDICTED: chlorophyll a-b binding protein 6... 78 1e-12
gb|ABA27047.1| TO75-2 [Taraxacum officinale] 78 1e-12
gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopers... 78 1e-12
gb|ABV82714.1| chloroplast chlorophyll a/b binding protein precu... 78 1e-12
ref|NP_191049.1| chlorophyll a-b binding protein 6 [Arabidopsis ... 77 2e-12
ref|XP_006291772.1| hypothetical protein CARUB_v10017942mg [Caps... 77 2e-12
ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6... 77 2e-12
ref|NP_850705.1| chlorophyll a-b binding protein 6 [Arabidopsis ... 77 2e-12
gb|AFW70295.1| hypothetical protein ZEAMMB73_802965 [Zea mays] 77 2e-12
gb|AFW70293.1| LOW QUALITY PROTEIN: hypothetical protein ZEAMMB7... 77 2e-12
ref|XP_002878004.1| hypothetical protein ARALYDRAFT_485905 [Arab... 77 2e-12
gb|ACN30800.1| unknown [Zea mays] 77 2e-12
ref|XP_002312019.1| putative chlorophyll a/b-binding family prot... 77 2e-12
dbj|BAH20219.1| AT3G54890 [Arabidopsis thaliana] 77 2e-12
>emb|CBI31475.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLAILAFVGFCV+ +++PGTGPLENLA+HLADPWHNNI DV
Sbjct: 153 RLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDV 193
>ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic
isoform 1 [Vitis vinifera] gi|147800947|emb|CAN75566.1|
hypothetical protein VITISV_032585 [Vitis vinifera]
Length = 244
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLAILAFVGFCV+ +++PGTGPLENLA+HLADPWHNNI DV
Sbjct: 196 RLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDV 236
>emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
[Nicotiana tabacum]
Length = 245
Score = 77.8 bits (190), Expect = 1e-12
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI DV
Sbjct: 197 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDV 237
>ref|XP_006345801.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Solanum tuberosum]
Length = 246
Score = 77.8 bits (190), Expect = 1e-12
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI DV
Sbjct: 197 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDV 237
>ref|XP_006345799.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Solanum tuberosum]
Length = 246
Score = 77.8 bits (190), Expect = 1e-12
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI DV
Sbjct: 197 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDV 237
>ref|XP_006436282.1| hypothetical protein CICLE_v10032568mg [Citrus clementina]
gi|568864996|ref|XP_006485870.1| PREDICTED: chlorophyll
a-b binding protein 6, chloroplastic-like [Citrus
sinensis] gi|557538478|gb|ESR49522.1| hypothetical
protein CICLE_v10032568mg [Citrus clementina]
Length = 245
Score = 77.8 bits (190), Expect = 1e-12
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI DV
Sbjct: 197 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDV 237
>ref|XP_004239673.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Solanum lycopersicum]
Length = 246
Score = 77.8 bits (190), Expect = 1e-12
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI DV
Sbjct: 197 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDV 237
>gb|ABA27047.1| TO75-2 [Taraxacum officinale]
Length = 67
Score = 77.8 bits (190), Expect = 1e-12
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI DV
Sbjct: 18 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDV 58
>gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|225895|prf||1402358A photosystem I protein CAB
Length = 246
Score = 77.8 bits (190), Expect = 1e-12
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI DV
Sbjct: 197 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDV 237
>gb|ABV82714.1| chloroplast chlorophyll a/b binding protein precursor
[Phyllostachys edulis]
Length = 246
Score = 77.8 bits (190), Expect = 1e-12
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA+HLADPWHNNI DV
Sbjct: 198 RLAMLAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDV 238
>ref|NP_191049.1| chlorophyll a-b binding protein 6 [Arabidopsis thaliana]
gi|75220543|sp|Q01667.1|CAB6_ARATH RecName:
Full=Chlorophyll a-b binding protein 6, chloroplastic;
AltName: Full=LHCI-730; AltName: Full=LHCII type III
CAB-6; AltName: Full=Light-harvesting complex protein
Lhca1; Flags: Precursor gi|268612158|pdb|2WSC|1 Chain 1,
Improved Model Of Plant Photosystem I
gi|268612176|pdb|2WSE|1 Chain 1, Improved Model Of Plant
Photosystem I gi|268612194|pdb|2WSF|1 Chain 1, Improved
Model Of Plant Photosystem I
gi|11762180|gb|AAG40368.1|AF325016_1 AT3g54890
[Arabidopsis thaliana]
gi|11908038|gb|AAG41448.1|AF326866_1 putative
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642856|gb|AAK00370.1|AF339688_1 putative
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|13605732|gb|AAK32859.1|AF361847_1
AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|16207|emb|CAA39534.1| chlorophyll A/B-binding protein
[Arabidopsis thaliana] gi|166644|gb|AAA32759.1|
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|4678304|emb|CAB41095.1| chlorophyll a/b-binding
protein [Arabidopsis thaliana]
gi|17979245|gb|AAL49939.1| AT3g54890/F28P10_130
[Arabidopsis thaliana] gi|20453135|gb|AAM19809.1|
AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|23507771|gb|AAN38689.1| At3g54890/F28P10_130
[Arabidopsis thaliana] gi|332645785|gb|AEE79306.1|
light-harvesting complex I chlorophyll a/b binding
protein 1 [Arabidopsis thaliana]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI D+
Sbjct: 196 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 236
>ref|XP_006291772.1| hypothetical protein CARUB_v10017942mg [Capsella rubella]
gi|482560479|gb|EOA24670.1| hypothetical protein
CARUB_v10017942mg [Capsella rubella]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI D+
Sbjct: 196 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 236
>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Cucumis sativus] gi|449525097|ref|XP_004169556.1|
PREDICTED: chlorophyll a-b binding protein 6A,
chloroplastic-like [Cucumis sativus]
Length = 246
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI D+
Sbjct: 198 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 238
>ref|NP_850705.1| chlorophyll a-b binding protein 6 [Arabidopsis thaliana]
gi|332645784|gb|AEE79305.1| light-harvesting complex I
chlorophyll a/b binding protein 1 [Arabidopsis thaliana]
Length = 207
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI D+
Sbjct: 162 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 202
>gb|AFW70295.1| hypothetical protein ZEAMMB73_802965 [Zea mays]
Length = 150
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA+HLADPWHNNI D+
Sbjct: 102 RLAMLAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDI 142
>gb|AFW70293.1| LOW QUALITY PROTEIN: hypothetical protein ZEAMMB73_802965, partial
[Zea mays]
Length = 273
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA+HLADPWHNNI D+
Sbjct: 197 RLAMLAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDI 237
>ref|XP_002878004.1| hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp.
lyrata] gi|297323842|gb|EFH54263.1| hypothetical protein
ARALYDRAFT_485905 [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI D+
Sbjct: 196 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 236
>gb|ACN30800.1| unknown [Zea mays]
Length = 196
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA+HLADPWHNNI D+
Sbjct: 148 RLAMLAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDI 188
>ref|XP_002312019.1| putative chlorophyll a/b-binding family protein [Populus
trichocarpa] gi|222851839|gb|EEE89386.1| putative
chlorophyll a/b-binding family protein [Populus
trichocarpa]
Length = 244
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI D+
Sbjct: 196 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 236
>dbj|BAH20219.1| AT3G54890 [Arabidopsis thaliana]
Length = 159
Score = 77.4 bits (189), Expect = 2e-12
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1
Query: 1 RLAILAFVGFCVRANSHPGTGPLENLANHLADPWHNNIADV 123
RLA+LAFVGFCV+ +++PGTGPLENLA HLADPWHNNI D+
Sbjct: 114 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 154