BLASTX nr result
ID: Ephedra28_contig00001042
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00001042
(480 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA41406.1| Type II chlorophyll a /b-binding protein [Pinus ... 166 2e-39
emb|CAC81065.1| putative chlorophyll A-B binding protein of LHCI... 166 3e-39
gb|ABK21282.1| unknown [Picea sitchensis] gi|116782291|gb|ABK224... 166 3e-39
gb|ABK22868.1| unknown [Picea sitchensis] 165 7e-39
ref|XP_003562834.1| PREDICTED: chlorophyll a-b binding protein 7... 162 6e-38
emb|CAA55864.1| type II LHCI [Lolium temulentum] 161 1e-37
emb|CAA59049.1| LHCI-680, photosystem I antenna protein [Hordeum... 160 1e-37
gb|EMS53700.1| Chlorophyll a-b binding protein 7, chloroplastic ... 160 1e-37
ref|XP_004958124.1| PREDICTED: chlorophyll a-b binding protein 7... 160 2e-37
ref|NP_001130616.1| chlorophyll a-b binding protein [Zea mays] g... 160 2e-37
ref|NP_001148893.1| chlorophyll a-b binding protein [Zea mays] g... 160 2e-37
gb|ACF78906.1| unknown [Zea mays] 160 2e-37
ref|XP_006657881.1| PREDICTED: chlorophyll a-b binding protein 7... 159 3e-37
gb|EMT28434.1| hypothetical protein F775_43774 [Aegilops tauschii] 159 3e-37
ref|NP_001060090.1| Os07g0577600 [Oryza sativa Japonica Group] g... 159 3e-37
ref|XP_002277906.1| PREDICTED: chlorophyll a-b binding protein, ... 157 1e-36
emb|CAN72005.1| hypothetical protein VITISV_033663 [Vitis vinifera] 157 1e-36
gb|ABY63668.1| chloroplast chlorophyll a/b binding protein [Phyl... 157 1e-36
ref|XP_002514914.1| chlorophyll A/B binding protein, putative [R... 157 1e-36
ref|XP_006484100.1| PREDICTED: chlorophyll a-b binding protein, ... 156 2e-36
>emb|CAA41406.1| Type II chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 278
Score = 166 bits (421), Expect = 2e-39
Identities = 78/82 (95%), Positives = 80/82 (97%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 197 LTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 256
Query: 298 DNLLAHLTDPGHATIFAAFSSQ 233
DNLLAHL DPGHATIFAAFSS+
Sbjct: 257 DNLLAHLADPGHATIFAAFSSK 278
>emb|CAC81065.1| putative chlorophyll A-B binding protein of LHCI type II precursor
[Picea abies]
Length = 278
Score = 166 bits (420), Expect = 3e-39
Identities = 77/82 (93%), Positives = 80/82 (97%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 197 LTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 256
Query: 298 DNLLAHLTDPGHATIFAAFSSQ 233
DNLLAHL DPGHAT+FAAFSS+
Sbjct: 257 DNLLAHLADPGHATVFAAFSSK 278
>gb|ABK21282.1| unknown [Picea sitchensis] gi|116782291|gb|ABK22450.1| unknown
[Picea sitchensis] gi|116784092|gb|ABK23211.1| unknown
[Picea sitchensis] gi|116786476|gb|ABK24121.1| unknown
[Picea sitchensis] gi|116791795|gb|ABK26112.1| unknown
[Picea sitchensis] gi|116791985|gb|ABK26188.1| unknown
[Picea sitchensis] gi|116792462|gb|ABK26376.1| unknown
[Picea sitchensis] gi|148908663|gb|ABR17439.1| unknown
[Picea sitchensis] gi|224284338|gb|ACN39904.1| unknown
[Picea sitchensis] gi|224284452|gb|ACN39960.1| unknown
[Picea sitchensis] gi|224284659|gb|ACN40062.1| unknown
[Picea sitchensis] gi|224284741|gb|ACN40101.1| unknown
[Picea sitchensis] gi|224285484|gb|ACN40463.1| unknown
[Picea sitchensis]
Length = 278
Score = 166 bits (420), Expect = 3e-39
Identities = 77/82 (93%), Positives = 80/82 (97%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 197 LTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 256
Query: 298 DNLLAHLTDPGHATIFAAFSSQ 233
DNLLAHL DPGHAT+FAAFSS+
Sbjct: 257 DNLLAHLADPGHATVFAAFSSK 278
>gb|ABK22868.1| unknown [Picea sitchensis]
Length = 233
Score = 165 bits (417), Expect = 7e-39
Identities = 76/82 (92%), Positives = 80/82 (97%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEKIKELRTKEIKNGRLAML+VMGAWFQAEYTGTGPI
Sbjct: 152 LTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLSVMGAWFQAEYTGTGPI 211
Query: 298 DNLLAHLTDPGHATIFAAFSSQ 233
DNLLAHL DPGHAT+FAAFSS+
Sbjct: 212 DNLLAHLADPGHATVFAAFSSK 233
>ref|XP_003562834.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Brachypodium distachyon]
Length = 258
Score = 162 bits (409), Expect = 6e-38
Identities = 75/80 (93%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLGYG GSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 177 LTGTDVGYPGGLWFDPLGYGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 236
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIF AF+
Sbjct: 237 DNLFAHLADPGHATIFRAFT 256
>emb|CAA55864.1| type II LHCI [Lolium temulentum]
Length = 253
Score = 161 bits (407), Expect = 1e-37
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLGYG GSPEK+KELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 172 LTGTDVGYPGGLWFDPLGYGNGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 231
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIF AF+
Sbjct: 232 DNLFAHLADPGHATIFRAFA 251
>emb|CAA59049.1| LHCI-680, photosystem I antenna protein [Hordeum vulgare subsp.
vulgare] gi|326493584|dbj|BAJ85253.1| predicted protein
[Hordeum vulgare subsp. vulgare]
Length = 255
Score = 160 bits (406), Expect = 1e-37
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLGYG GSPEK+KELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 174 LTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 233
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIF AF+
Sbjct: 234 DNLFAHLADPGHATIFRAFA 253
>gb|EMS53700.1| Chlorophyll a-b binding protein 7, chloroplastic [Triticum urartu]
Length = 219
Score = 160 bits (406), Expect = 1e-37
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLGYG GSPEK+KELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 138 LTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 197
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIF AF+
Sbjct: 198 DNLFAHLADPGHATIFRAFA 217
>ref|XP_004958124.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Setaria italica]
Length = 259
Score = 160 bits (404), Expect = 2e-37
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 178 LTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 237
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIF AF+
Sbjct: 238 DNLFAHLADPGHATIFQAFT 257
>ref|NP_001130616.1| chlorophyll a-b binding protein [Zea mays]
gi|195636368|gb|ACG37652.1| chlorophyll a-b binding
protein [Zea mays] gi|414590632|tpg|DAA41203.1| TPA:
chlorophyll a-b binding protein [Zea mays]
Length = 260
Score = 160 bits (404), Expect = 2e-37
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 179 LTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 238
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIF AF+
Sbjct: 239 DNLFAHLADPGHATIFQAFT 258
>ref|NP_001148893.1| chlorophyll a-b binding protein [Zea mays]
gi|195622990|gb|ACG33325.1| chlorophyll a-b binding
protein [Zea mays] gi|414887286|tpg|DAA63300.1| TPA:
chlorophyll a-b binding protein isoform 1 [Zea mays]
gi|414887287|tpg|DAA63301.1| TPA: chlorophyll a-b
binding protein isoform 2 [Zea mays]
gi|414887288|tpg|DAA63302.1| TPA: chlorophyll a-b
binding protein isoform 3 [Zea mays]
Length = 270
Score = 160 bits (404), Expect = 2e-37
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 189 LTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 248
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIF AF+
Sbjct: 249 DNLFAHLADPGHATIFQAFT 268
>gb|ACF78906.1| unknown [Zea mays]
Length = 156
Score = 160 bits (404), Expect = 2e-37
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 75 LTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 134
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIF AF+
Sbjct: 135 DNLFAHLADPGHATIFQAFT 154
>ref|XP_006657881.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Oryza brachyantha]
Length = 266
Score = 159 bits (403), Expect = 3e-37
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 185 LTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 244
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIF AF+
Sbjct: 245 DNLFAHLADPGHATIFQAFT 264
>gb|EMT28434.1| hypothetical protein F775_43774 [Aegilops tauschii]
Length = 255
Score = 159 bits (403), Expect = 3e-37
Identities = 73/80 (91%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLGYG GSPEK+K+LRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 174 LTGTDVGYPGGLWFDPLGYGTGSPEKLKDLRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 233
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIF AF+
Sbjct: 234 DNLFAHLADPGHATIFRAFA 253
>ref|NP_001060090.1| Os07g0577600 [Oryza sativa Japonica Group]
gi|34393511|dbj|BAC83072.1| putative photosystem I
antenna protein [Oryza sativa Japonica Group]
gi|113611626|dbj|BAF22004.1| Os07g0577600 [Oryza sativa
Japonica Group] gi|125558916|gb|EAZ04452.1| hypothetical
protein OsI_26600 [Oryza sativa Indica Group]
gi|125600834|gb|EAZ40410.1| hypothetical protein
OsJ_24861 [Oryza sativa Japonica Group]
gi|215678915|dbj|BAG96345.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215679008|dbj|BAG96438.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215679048|dbj|BAG96478.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215686399|dbj|BAG87660.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737439|dbj|BAG96569.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737698|dbj|BAG96828.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737734|dbj|BAG96864.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767334|dbj|BAG99562.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 263
Score = 159 bits (403), Expect = 3e-37
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 182 LTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 241
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIF AF+
Sbjct: 242 DNLFAHLADPGHATIFQAFT 261
>ref|XP_002277906.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
vinifera] gi|297738455|emb|CBI27656.3| unnamed protein
product [Vitis vinifera]
Length = 271
Score = 157 bits (398), Expect = 1e-36
Identities = 73/80 (91%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSP+KIKELRTKEIKNGRLAMLAVMGAWFQA YTGTGPI
Sbjct: 190 LTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPI 249
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIFAAF+
Sbjct: 250 DNLFAHLADPGHATIFAAFT 269
>emb|CAN72005.1| hypothetical protein VITISV_033663 [Vitis vinifera]
Length = 272
Score = 157 bits (398), Expect = 1e-36
Identities = 73/80 (91%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSP+KIKELRTKEIKNGRLAMLAVMGAWFQA YTGTGPI
Sbjct: 191 LTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPI 250
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHATIFAAF+
Sbjct: 251 DNLFAHLADPGHATIFAAFT 270
>gb|ABY63668.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 262
Score = 157 bits (397), Expect = 1e-36
Identities = 72/80 (90%), Positives = 75/80 (93%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEK+KELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI
Sbjct: 181 LTGTDVGYPGGLWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 240
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHA IF AF+
Sbjct: 241 DNLFAHLADPGHANIFQAFT 260
>ref|XP_002514914.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223545965|gb|EEF47468.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 270
Score = 157 bits (397), Expect = 1e-36
Identities = 73/80 (91%), Positives = 75/80 (93%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEKIKELRTKEIKNGRLAMLAVMGAWFQ YTGTGPI
Sbjct: 189 LTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPI 248
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL AHL DPGHAT+FAAFS
Sbjct: 249 DNLFAHLADPGHATVFAAFS 268
>ref|XP_006484100.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Citrus sinensis]
Length = 268
Score = 156 bits (395), Expect = 2e-36
Identities = 71/80 (88%), Positives = 76/80 (95%)
Frame = -3
Query: 478 LTGTDVGYPGGLWFDPLGYGKGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPI 299
LTGTDVGYPGGLWFDPLG+G GSPEK+KELRTKEIKNGRLAMLAVMGAWFQ YTGTGPI
Sbjct: 187 LTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPI 246
Query: 298 DNLLAHLTDPGHATIFAAFS 239
DNL+AHL DPGHAT+FAAF+
Sbjct: 247 DNLIAHLADPGHATVFAAFT 266