BLASTX nr result
ID: Ephedra28_contig00001038
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00001038
(370 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004958212.1| PREDICTED: 40S ribosomal protein S3a-like [S... 167 1e-39
gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu... 167 2e-39
ref|XP_006663974.1| PREDICTED: 40S ribosomal protein S3a-like [O... 166 3e-39
ref|XP_006663973.1| PREDICTED: 40S ribosomal protein S3a-like [O... 166 3e-39
ref|XP_006663971.1| PREDICTED: 40S ribosomal protein S3a-like [O... 166 3e-39
ref|XP_006649574.1| PREDICTED: 40S ribosomal protein S3a-like [O... 166 3e-39
gb|ABK24527.1| unknown [Picea sitchensis] 166 3e-39
ref|XP_004985319.1| PREDICTED: 40S ribosomal protein S3a-like is... 165 5e-39
ref|XP_004985318.1| PREDICTED: 40S ribosomal protein S3a-like is... 165 5e-39
ref|XP_003559021.1| PREDICTED: 40S ribosomal protein S3a-like [B... 164 9e-39
emb|CBI34197.3| unnamed protein product [Vitis vinifera] 164 9e-39
ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Viti... 164 9e-39
ref|XP_002512232.1| 40S ribosomal protein S3a, putative [Ricinus... 164 9e-39
gb|ABK22319.1| unknown [Picea sitchensis] 164 9e-39
sp|A7Q5X9.1|RS3A2_VITVI RecName: Full=40S ribosomal protein S3a-2 164 9e-39
gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar] 164 9e-39
gb|EXB39197.1| 40S ribosomal protein S3a [Morus notabilis] 164 1e-38
gb|EEE53089.1| hypothetical protein OsJ_35850 [Oryza sativa Japo... 164 1e-38
gb|EEC69140.1| hypothetical protein OsI_38068 [Oryza sativa Indi... 164 1e-38
ref|XP_002283142.1| PREDICTED: 40S ribosomal protein S3a-1 [Viti... 164 1e-38
>ref|XP_004958212.1| PREDICTED: 40S ribosomal protein S3a-like [Setaria italica]
Length = 262
Score = 167 bits (423), Expect = 1e-39
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPF KKDWYD+KAP+ FS+R VGKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DEDQA
Sbjct: 21 VDPFAKKDWYDIKAPSVFSVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQSDEDQA 80
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
YRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
Length = 261
Score = 167 bits (422), Expect = 2e-39
Identities = 77/88 (87%), Positives = 84/88 (95%)
Frame = +1
Query: 106 AVDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQ 285
AVDPF KKDWYD+KAP+ F++R +GKTLVSRTQGTKIASEGLKHRVFE+SLADLQ DEDQ
Sbjct: 20 AVDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQ 79
Query: 286 AYRKIKLRAEDVQGKNVLTNFWGMDFTT 369
AYRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 80 AYRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>ref|XP_006663974.1| PREDICTED: 40S ribosomal protein S3a-like [Oryza brachyantha]
Length = 261
Score = 166 bits (420), Expect = 3e-39
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPF KKDWYD+KAP+ F++R VGKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DEDQA
Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 80
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
YRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>ref|XP_006663973.1| PREDICTED: 40S ribosomal protein S3a-like [Oryza brachyantha]
Length = 261
Score = 166 bits (420), Expect = 3e-39
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPF KKDWYD+KAP+ F++R VGKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DEDQA
Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 80
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
YRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>ref|XP_006663971.1| PREDICTED: 40S ribosomal protein S3a-like [Oryza brachyantha]
Length = 261
Score = 166 bits (420), Expect = 3e-39
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPF KKDWYD+KAP+ F++R VGKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DEDQA
Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 80
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
YRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>ref|XP_006649574.1| PREDICTED: 40S ribosomal protein S3a-like [Oryza brachyantha]
Length = 260
Score = 166 bits (420), Expect = 3e-39
Identities = 77/87 (88%), Positives = 84/87 (96%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPF+KKDWYD+KAP+ F++R +GKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DEDQA
Sbjct: 21 VDPFSKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 80
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
YRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>gb|ABK24527.1| unknown [Picea sitchensis]
Length = 165
Score = 166 bits (420), Expect = 3e-39
Identities = 79/88 (89%), Positives = 85/88 (96%)
Frame = +1
Query: 106 AVDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQ 285
AVDPFTKKDWYDVKAP+TF+ R VGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DEDQ
Sbjct: 20 AVDPFTKKDWYDVKAPSTFNTRTVGKTLVTRTQGTKIASEGLKHRVFELSLADLQNDEDQ 79
Query: 286 AYRKIKLRAEDVQGKNVLTNFWGMDFTT 369
A+RKIKLRAEDVQG+NVLTNFWGMDFTT
Sbjct: 80 AFRKIKLRAEDVQGRNVLTNFWGMDFTT 107
>ref|XP_004985319.1| PREDICTED: 40S ribosomal protein S3a-like isoform X2 [Setaria
italica]
Length = 263
Score = 165 bits (418), Expect = 5e-39
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPF KKDWYD+KAP+ FS+R +GKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DEDQA
Sbjct: 21 VDPFAKKDWYDIKAPSVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQSDEDQA 80
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
YRKI+LRAED+QG+NVLTNFWGMDFTT
Sbjct: 81 YRKIRLRAEDIQGRNVLTNFWGMDFTT 107
>ref|XP_004985318.1| PREDICTED: 40S ribosomal protein S3a-like isoform X1 [Setaria
italica]
Length = 290
Score = 165 bits (418), Expect = 5e-39
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPF KKDWYD+KAP+ FS+R +GKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DEDQA
Sbjct: 21 VDPFAKKDWYDIKAPSVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQSDEDQA 80
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
YRKI+LRAED+QG+NVLTNFWGMDFTT
Sbjct: 81 YRKIRLRAEDIQGRNVLTNFWGMDFTT 107
>ref|XP_003559021.1| PREDICTED: 40S ribosomal protein S3a-like [Brachypodium distachyon]
Length = 265
Score = 164 bits (416), Expect = 9e-39
Identities = 79/87 (90%), Positives = 82/87 (94%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPFTKK+WYD+KAP FS R VGKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DEDQA
Sbjct: 21 VDPFTKKEWYDIKAPLIFSTRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQADEDQA 80
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
YRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>emb|CBI34197.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 164 bits (416), Expect = 9e-39
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = +1
Query: 106 AVDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQ 285
A DPF KKDWYD+KAP+ FS+R VGKTLVSRTQGTKIASEGLKHRVFE+SLADLQ DED
Sbjct: 20 AADPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDH 79
Query: 286 AYRKIKLRAEDVQGKNVLTNFWGMDFTT 369
AYRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 80 AYRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera]
Length = 261
Score = 164 bits (416), Expect = 9e-39
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = +1
Query: 106 AVDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQ 285
A DPF KKDWYD+KAP+ FS+R VGKTLVSRTQGTKIASEGLKHRVFE+SLADLQ DED
Sbjct: 20 AADPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDH 79
Query: 286 AYRKIKLRAEDVQGKNVLTNFWGMDFTT 369
AYRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 80 AYRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>ref|XP_002512232.1| 40S ribosomal protein S3a, putative [Ricinus communis]
gi|223548193|gb|EEF49684.1| 40S ribosomal protein S3a,
putative [Ricinus communis]
Length = 263
Score = 164 bits (416), Expect = 9e-39
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = +1
Query: 106 AVDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQ 285
A DPF KKDWYD+KAP+ F +R VGKTLV+RTQGTKIASEGLKHRVFEVSLADLQKDED
Sbjct: 20 AADPFAKKDWYDIKAPSVFKVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQKDEDH 79
Query: 286 AYRKIKLRAEDVQGKNVLTNFWGMDFTT 369
AYRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 80 AYRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>gb|ABK22319.1| unknown [Picea sitchensis]
Length = 245
Score = 164 bits (416), Expect = 9e-39
Identities = 78/87 (89%), Positives = 84/87 (96%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPFTKKDWYDVKAP+TF+ R VGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DEDQA
Sbjct: 5 VDPFTKKDWYDVKAPSTFNTRTVGKTLVTRTQGTKIASEGLKHRVFELSLADLQNDEDQA 64
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
+RKIKLRAEDVQG+NVLTNFWGMDFTT
Sbjct: 65 FRKIKLRAEDVQGRNVLTNFWGMDFTT 91
>sp|A7Q5X9.1|RS3A2_VITVI RecName: Full=40S ribosomal protein S3a-2
Length = 234
Score = 164 bits (416), Expect = 9e-39
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = +1
Query: 106 AVDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQ 285
A DPF KKDWYD+KAP+ FS+R VGKTLVSRTQGTKIASEGLKHRVFE+SLADLQ DED
Sbjct: 20 AADPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDH 79
Query: 286 AYRKIKLRAEDVQGKNVLTNFWGMDFTT 369
AYRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 80 AYRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
Length = 261
Score = 164 bits (416), Expect = 9e-39
Identities = 75/87 (86%), Positives = 84/87 (96%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPF+KKDWYD+KAP+ F++R +GKTLVSRTQGTKIASEGLKHRVFE+SLADLQ DEDQ+
Sbjct: 21 VDPFSKKDWYDIKAPSVFTVRNIGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQS 80
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
YRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>gb|EXB39197.1| 40S ribosomal protein S3a [Morus notabilis]
Length = 262
Score = 164 bits (415), Expect = 1e-38
Identities = 78/88 (88%), Positives = 83/88 (94%)
Frame = +1
Query: 106 AVDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQ 285
A DPF KKDWYD+KAP+ F+ RQVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQKDED
Sbjct: 20 AADPFAKKDWYDIKAPSLFNQRQVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQKDEDH 79
Query: 286 AYRKIKLRAEDVQGKNVLTNFWGMDFTT 369
AYRKI+LRAEDVQGKNVLTNFWGMDFTT
Sbjct: 80 AYRKIRLRAEDVQGKNVLTNFWGMDFTT 107
>gb|EEE53089.1| hypothetical protein OsJ_35850 [Oryza sativa Japonica Group]
Length = 764
Score = 164 bits (414), Expect = 1e-38
Identities = 77/87 (88%), Positives = 82/87 (94%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPF KKDWYD+KAP+ F++R VGKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DEDQA
Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 80
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
YRKI+LRAEDVQGKNVLTNFWGM FTT
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMSFTT 107
>gb|EEC69140.1| hypothetical protein OsI_38068 [Oryza sativa Indica Group]
Length = 818
Score = 164 bits (414), Expect = 1e-38
Identities = 77/87 (88%), Positives = 82/87 (94%)
Frame = +1
Query: 109 VDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 288
VDPF KKDWYD+KAP+ F++R VGKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DEDQA
Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 80
Query: 289 YRKIKLRAEDVQGKNVLTNFWGMDFTT 369
YRKI+LRAEDVQGKNVLTNFWGM FTT
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMSFTT 107
>ref|XP_002283142.1| PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera]
gi|269969539|sp|A5B4K1.1|RS3A1_VITVI RecName: Full=40S
ribosomal protein S3a-1 gi|147766920|emb|CAN67522.1|
hypothetical protein VITISV_020206 [Vitis vinifera]
gi|297737094|emb|CBI26295.3| unnamed protein product
[Vitis vinifera]
Length = 261
Score = 164 bits (414), Expect = 1e-38
Identities = 76/88 (86%), Positives = 82/88 (93%)
Frame = +1
Query: 106 AVDPFTKKDWYDVKAPATFSIRQVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQKDEDQ 285
A DPF KKDWYD+KAP+ F +R VGKTLVSRTQGTKIASEGLKHRVFE+SLADLQ DEDQ
Sbjct: 20 AADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADEDQ 79
Query: 286 AYRKIKLRAEDVQGKNVLTNFWGMDFTT 369
AYRKI+LRAEDVQG+NVLTNFWGMDFTT
Sbjct: 80 AYRKIRLRAEDVQGRNVLTNFWGMDFTT 107