BLASTX nr result
ID: Ephedra28_contig00000991
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00000991
(1180 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE75613.1| unknown [Picea sitchensis] 218 4e-54
ref|XP_006444209.1| hypothetical protein CICLE_v10022350mg [Citr... 177 1e-41
ref|XP_002304170.1| proline-rich family protein [Populus trichoc... 176 1e-41
gb|EOY19064.1| C2H2 and C2HC zinc fingers superfamily protein is... 173 1e-40
gb|EOY19063.1| C2H2 and C2HC zinc fingers superfamily protein is... 173 1e-40
ref|XP_006855383.1| hypothetical protein AMTR_s00057p00133180 [A... 171 5e-40
ref|XP_003520224.1| PREDICTED: U1 small nuclear ribonucleoprotei... 171 7e-40
ref|XP_006588606.1| PREDICTED: U1 small nuclear ribonucleoprotei... 170 1e-39
ref|XP_003536302.1| PREDICTED: U1 small nuclear ribonucleoprotei... 169 2e-39
ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotei... 166 2e-38
ref|XP_002452566.1| hypothetical protein SORBIDRAFT_04g028260 [S... 166 2e-38
gb|EOY19062.1| C2H2 and C2HC zinc fingers superfamily protein is... 166 2e-38
gb|ESW16562.1| hypothetical protein PHAVU_007G166600g [Phaseolus... 165 4e-38
ref|XP_003572258.1| PREDICTED: uncharacterized protein LOC100822... 164 5e-38
ref|NP_001046503.1| Os02g0266100 [Oryza sativa Japonica Group] g... 164 6e-38
ref|XP_004954569.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuc... 164 8e-38
gb|AFW65850.1| WW domain-binding protein 11 [Zea mays] 164 8e-38
ref|NP_001131283.1| uncharacterized protein LOC100192596 [Zea ma... 164 8e-38
ref|XP_002453652.1| hypothetical protein SORBIDRAFT_04g009880 [S... 162 2e-37
ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263... 161 5e-37
>gb|ADE75613.1| unknown [Picea sitchensis]
Length = 244
Score = 218 bits (555), Expect = 4e-54
Identities = 126/241 (52%), Positives = 148/241 (61%), Gaps = 23/241 (9%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQT- 252
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQT
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTA 62
Query: 253 -FQQQMSAAFQQNLVAMQSGQRPMR------XXXXXXXXXXXXXXXXXXXXXRPPILQRP 411
FQQQ+ AAFQQ+L +MQ+GQ+ R RPPIL RP
Sbjct: 63 AFQQQVGAAFQQHLASMQAGQQRPRIPMLPPPTLPVPGSTQLPNGLSMLPTLRPPILTRP 122
Query: 412 P-VGPGFSMPMGSAPILGPPG-ATPSPAGIAQPNGLPRPLTLAPPGSTAPRPSNPTSSPL 585
+ PG+ + +G++P++ PPG A SP G+AQ NG PRP TL PP ST S TSSP+
Sbjct: 123 TLIPPGYGVSVGTSPMIRPPGAAVTSPPGVAQSNGWPRPPTLTPPVSTGVTASTATSSPM 182
Query: 586 SNGHVPNGSVLPSSATYNYSAPQVNYAQQNSVP-------------QVSYVQQNSAPTIP 726
SN + N + S TY QQNS+P S QQ+++ T P
Sbjct: 183 SNVLMSNPPISGPSGTYQNQ-------QQNSIPTSGAYGTYNYAAAPASLSQQSTSVTPP 235
Query: 727 N 729
N
Sbjct: 236 N 236
>ref|XP_006444209.1| hypothetical protein CICLE_v10022350mg [Citrus clementina]
gi|568852371|ref|XP_006479851.1| PREDICTED: U1 small
nuclear ribonucleoprotein C-like [Citrus sinensis]
gi|557546471|gb|ESR57449.1| hypothetical protein
CICLE_v10022350mg [Citrus clementina]
Length = 197
Score = 177 bits (448), Expect = 1e-41
Identities = 101/203 (49%), Positives = 124/203 (61%), Gaps = 7/203 (3%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQR+KEHLGQT
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTA 62
Query: 256 Q-QQMSAAFQQNLVAMQSGQRPMRXXXXXXXXXXXXXXXXXXXXXRPPILQRP-PVGPGF 429
QQ+ AA+ Q+L+A QRP R RPP+L RP P PG+
Sbjct: 63 AFQQVGAAYNQHLLA----QRP-RLPVLPTPVMPMTGSAPLVPGMRPPVLPRPGPSPPGY 117
Query: 430 SMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAPP----GSTAPRPSNPTSSPLSNGH 597
G P++ PPGA +P Q NG PRP + P GS AP S+ + ++
Sbjct: 118 VSAPGMPPMMAPPGAPSAP---GQLNGFPRPPAVMNPTAVSGSAAPPASSSGAPSMATPQ 174
Query: 598 VPNGS-VLPSSATYNYSAPQVNY 663
+ +P+S N AP++N+
Sbjct: 175 TYQANPTVPTSGNLNAQAPEMNH 197
>ref|XP_002304170.1| proline-rich family protein [Populus trichocarpa]
gi|222841602|gb|EEE79149.1| proline-rich family protein
[Populus trichocarpa]
Length = 202
Score = 176 bits (447), Expect = 1e-41
Identities = 104/207 (50%), Positives = 122/207 (58%), Gaps = 11/207 (5%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQS+IDQR+KEHLGQT
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQTA 62
Query: 256 Q-QQMSAAFQQNLVAMQSGQRPMRXXXXXXXXXXXXXXXXXXXXXRPPILQRP-PVGPGF 429
QQ+ AA+ Q+L+ QRP RPP+L RP P PG+
Sbjct: 63 AFQQVGAAYNQHLMV----QRPRLPVLPTPVMPIGGNNAPLFPGMRPPVLPRPMPGAPGY 118
Query: 430 SMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAP----PGST-APRPSNPTSSPLSNG 594
P P++ PPGA P Q NG+PRP T+ PGST AP PS P S
Sbjct: 119 MNPPMMPPMMAPPGAPSLP---GQMNGIPRPPTMIAQPNVPGSTAAPTPSGPPSMGPPVT 175
Query: 595 HVPNGSVLPS----SATYNYSAPQVNY 663
+ N + S S N +AP+ N+
Sbjct: 176 YQANQAATTSGGFDSFNVNAAAPEANH 202
>gb|EOY19064.1| C2H2 and C2HC zinc fingers superfamily protein isoform 3 [Theobroma
cacao]
Length = 211
Score = 173 bits (438), Expect = 1e-40
Identities = 104/205 (50%), Positives = 120/205 (58%), Gaps = 7/205 (3%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 19 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 78
Query: 256 Q-QQMSAAFQQNLVAMQSGQRPM-----RXXXXXXXXXXXXXXXXXXXXXRPPILQRP-P 414
QQ+ AAF Q+L+A QRP RPP+L RP P
Sbjct: 79 AFQQVGAAFNQHLMA----QRPRLPVLPTPVMPIPGAAPLPMNQPMVPGIRPPVLPRPLP 134
Query: 415 VGPGFSMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAPPGSTAPRPSNPTSSPLSNG 594
PG+ G P++ PPGA P Q NG+PRP TLAP + + PTSS
Sbjct: 135 GPPGYVPAPGMPPMVAPPGAPSLP---GQINGVPRPPTLAPLTTVPGTATTPTSS----- 186
Query: 595 HVPNGSVLPSSATYNYSAPQVNYAQ 669
+ V P+S N +AP N +Q
Sbjct: 187 NAAPTMVTPASYQTNPAAPTGNQSQ 211
>gb|EOY19063.1| C2H2 and C2HC zinc fingers superfamily protein isoform 2 [Theobroma
cacao]
Length = 195
Score = 173 bits (438), Expect = 1e-40
Identities = 104/205 (50%), Positives = 120/205 (58%), Gaps = 7/205 (3%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 62
Query: 256 Q-QQMSAAFQQNLVAMQSGQRPM-----RXXXXXXXXXXXXXXXXXXXXXRPPILQRP-P 414
QQ+ AAF Q+L+A QRP RPP+L RP P
Sbjct: 63 AFQQVGAAFNQHLMA----QRPRLPVLPTPVMPIPGAAPLPMNQPMVPGIRPPVLPRPLP 118
Query: 415 VGPGFSMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAPPGSTAPRPSNPTSSPLSNG 594
PG+ G P++ PPGA P Q NG+PRP TLAP + + PTSS
Sbjct: 119 GPPGYVPAPGMPPMVAPPGAPSLP---GQINGVPRPPTLAPLTTVPGTATTPTSS----- 170
Query: 595 HVPNGSVLPSSATYNYSAPQVNYAQ 669
+ V P+S N +AP N +Q
Sbjct: 171 NAAPTMVTPASYQTNPAAPTGNQSQ 195
>ref|XP_006855383.1| hypothetical protein AMTR_s00057p00133180 [Amborella trichopoda]
gi|548859149|gb|ERN16850.1| hypothetical protein
AMTR_s00057p00133180 [Amborella trichopoda]
Length = 224
Score = 171 bits (433), Expect = 5e-40
Identities = 112/226 (49%), Positives = 129/226 (57%), Gaps = 29/226 (12%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQT- 252
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQ+VKEHLGQT
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQKVKEHLGQTA 62
Query: 253 -FQQQMSAAFQQNLVAMQSG-QRP----MRXXXXXXXXXXXXXXXXXXXXXRPPILQRPP 414
FQQQ+ AF Q+L+++QS QRP + RPP+L P
Sbjct: 63 AFQQQVGVAFNQHLMSLQSNPQRPRIPVLPPVLPIPSTSQAPINPSMMPMLRPPLLPPPT 122
Query: 415 VG-PGFSMPMGSAPILGPPG-ATPSPAGIAQPNGLPRPLTL-----------APPGSTAP 555
G PG+S G P+ GPPG A P P N LPRPL + A P P
Sbjct: 123 SGAPGYSAAPGMTPLSGPPGTAPPMPL-----NPLPRPLNMPNTGAPASNGGAFPNMNVP 177
Query: 556 RPSNPTSSPLSNGH-------VPNGS-VLPSSATYNYSAP-QVNYA 666
P S+ ++G +P S LPSS T SAP Q YA
Sbjct: 178 TYQQPNSAGTASGSGFEGFNMLPTSSGTLPSSVT--SSAPSQDGYA 221
>ref|XP_003520224.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Glycine max]
Length = 206
Score = 171 bits (432), Expect = 7e-40
Identities = 97/198 (48%), Positives = 113/198 (57%), Gaps = 7/198 (3%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 62
Query: 256 QQQMSAAFQQNLVAMQSGQRPM--RXXXXXXXXXXXXXXXXXXXXXRPPILQRPPVGPGF 429
Q +L+ + P+ RPP+ RPP PG+
Sbjct: 63 AFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGSQPLMPGMRPPVFPRPPGAPGY 122
Query: 430 SMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAP----PGSTAPRPSNPTSSPLSNGH 597
P+L PPGA +P Q N +PRP +LAP PGSTA SN S +S+
Sbjct: 123 VSAPTMPPMLPPPGAPQAP---GQLNTIPRPPSLAPPPAVPGSTAAPASNGAPSMVSSAM 179
Query: 598 VPNGSVLPSSATY-NYSA 648
PSS +Y NY+A
Sbjct: 180 YQANPPAPSSGSYDNYNA 197
>ref|XP_006588606.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X2
[Glycine max] gi|571481278|ref|XP_006588607.1|
PREDICTED: U1 small nuclear ribonucleoprotein C-like
isoform X3 [Glycine max]
Length = 207
Score = 170 bits (430), Expect = 1e-39
Identities = 100/208 (48%), Positives = 117/208 (56%), Gaps = 11/208 (5%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 62
Query: 256 QQQMSAAFQQNLVAMQSGQRPM--RXXXXXXXXXXXXXXXXXXXXXRPPILQRPPVGPGF 429
Q +L+ + P+ RPP+ RPP PG+
Sbjct: 63 AFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGGQPLMQGMRPPVFPRPPGAPGY 122
Query: 430 SMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAP----PGSTAPRPSNPTSSPLSNGH 597
P+L PPGA P Q N +PRP +LAP PGSTA SN S +S+
Sbjct: 123 VSAHTMPPMLPPPGAPQVP---GQLNTIPRPPSLAPPPTVPGSTATPASNGAPSMVSSAM 179
Query: 598 VPNGSVLPSSATY-NYS----APQVNYA 666
PSS +Y NY+ AP+V+ A
Sbjct: 180 YQANPPAPSSGSYDNYNTSAQAPEVHSA 207
>ref|XP_003536302.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
[Glycine max]
Length = 206
Score = 169 bits (428), Expect = 2e-39
Identities = 99/207 (47%), Positives = 116/207 (56%), Gaps = 11/207 (5%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 62
Query: 256 QQQMSAAFQQNLVAMQSGQRPM--RXXXXXXXXXXXXXXXXXXXXXRPPILQRPPVGPGF 429
Q +L+ + P+ RPP+ RPP PG+
Sbjct: 63 AFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGGQPLMQGMRPPVFPRPPGAPGY 122
Query: 430 SMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAP----PGSTAPRPSNPTSSPLSNGH 597
P+L PPGA P Q N +PRP +LAP PGSTA SN S +S+
Sbjct: 123 VSAHTMPPMLPPPGAPQVP---GQLNTIPRPPSLAPPPTVPGSTATPASNGAPSMVSSAM 179
Query: 598 VPNGSVLPSSATY-NYS----APQVNY 663
PSS +Y NY+ AP+ N+
Sbjct: 180 YQANPPAPSSGSYDNYNTSAQAPEGNH 206
>ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cucumis
sativus] gi|449491514|ref|XP_004158922.1| PREDICTED: U1
small nuclear ribonucleoprotein C-like [Cucumis sativus]
Length = 197
Score = 166 bits (420), Expect = 2e-38
Identities = 100/194 (51%), Positives = 118/194 (60%), Gaps = 2/194 (1%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAA 62
Query: 256 Q-QQMSAAFQQNLVAMQSGQRPMRXXXXXXXXXXXXXXXXXXXXXRPPILQRP-PVGPGF 429
QQ+ AAF Q+L+ GQRP RPP+L RP P PG+
Sbjct: 63 AFQQVGAAFNQHLL----GQRP--RLPVLPTPVMPGAAPGLMPGIRPPVLPRPIPGAPGY 116
Query: 430 SMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAPPGSTAPRPSNPTSSPLSNGHVPNG 609
P++ PPGA P P + P+ P P L PGS AP+PS+ +PL+
Sbjct: 117 LPTPTMPPMMAPPGA-PIPGQVNIPSRPPPPAPL--PGS-APQPSSTNGAPLA------- 165
Query: 610 SVLPSSATYNYSAP 651
PS+ N +AP
Sbjct: 166 --APSTYQANPAAP 177
>ref|XP_002452566.1| hypothetical protein SORBIDRAFT_04g028260 [Sorghum bicolor]
gi|363805509|sp|C5XYW4.1|RU1C2_SORBI RecName: Full=U1
small nuclear ribonucleoprotein C-2; Short=U1 snRNP C-2;
Short=U1-C-2; Short=U1C-2 gi|241932397|gb|EES05542.1|
hypothetical protein SORBIDRAFT_04g028260 [Sorghum
bicolor]
Length = 228
Score = 166 bits (420), Expect = 2e-38
Identities = 100/202 (49%), Positives = 115/202 (56%), Gaps = 10/202 (4%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 62
Query: 256 QQQMSAAFQQNLVAMQSG-QRPMRXXXXXXXXXXXXXXXXXXXXXRPPILQRPPVGPGFS 432
Q A F Q+++A RP RPPIL P V PG+
Sbjct: 63 AFQAGAPFNQHMLAFPGAVARPRLPILPTPGMPHGFPQAPLMPGVRPPILPAPGV-PGYP 121
Query: 433 MPMGSAPILG-PPGATPSPAGIAQPNGLPRPLTLAPPGS----TAPRPSNPTSSPLSNG- 594
+ P G PPG+ P P A P +P+P APPGS AP P PT P ++G
Sbjct: 122 GAPPTMPQPGAPPGSMPQPG--APPGSMPQP--GAPPGSMPMQMAPLPRPPTLPPPTSGV 177
Query: 595 ---HVPNGSVLPSSATYNYSAP 651
+PN + P+ N AP
Sbjct: 178 PGAPIPNSAAPPAIYQANPPAP 199
>gb|EOY19062.1| C2H2 and C2HC zinc fingers superfamily protein isoform 1 [Theobroma
cacao]
Length = 208
Score = 166 bits (419), Expect = 2e-38
Identities = 99/204 (48%), Positives = 117/204 (57%), Gaps = 13/204 (6%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 62
Query: 256 Q-QQMSAAFQQNLVAMQSGQRPM-----RXXXXXXXXXXXXXXXXXXXXXRPPILQRP-P 414
QQ+ AAF Q+L+A QRP RPP+L RP P
Sbjct: 63 AFQQVGAAFNQHLMA----QRPRLPVLPTPVMPIPGAAPLPMNQPMVPGIRPPVLPRPLP 118
Query: 415 VGPGFSMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAP-----PGSTAPRPSNPTSS 579
PG+ G P++ PPGA P I NG+PRP TLAP +T P SN +
Sbjct: 119 GPPGYVPAPGMPPMVAPPGAPSLPGQI---NGVPRPPTLAPLTTVPGTATTPTSSNAAPT 175
Query: 580 PLSNGHVPNGSVLPSSATY-NYSA 648
++ P+ + N++A
Sbjct: 176 MVTPASYQTNPAAPTGGGFDNFNA 199
>gb|ESW16562.1| hypothetical protein PHAVU_007G166600g [Phaseolus vulgaris]
Length = 204
Score = 165 bits (417), Expect = 4e-38
Identities = 105/204 (51%), Positives = 115/204 (56%), Gaps = 13/204 (6%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ-- 60
Query: 256 QQQMSAAFQQNLVAM--QSGQRP------MRXXXXXXXXXXXXXXXXXXXXXRPPILQRP 411
+AAFQQ VA QRP RPP+ RP
Sbjct: 61 ----AAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLMPGMRPPVFPRP 116
Query: 412 PVGPGFSMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAP----PGSTAPRPSNPTSS 579
P PG+ P+L PPGA P Q N LPRP +LAP PGSTA SN S
Sbjct: 117 P--PGYVSAPTMPPMLPPPGAPQMP---GQLNTLPRPPSLAPPPTAPGSTAAPASNGAPS 171
Query: 580 PLSNGHVPNGSVLPSSATY-NYSA 648
+S+ PSS Y NY+A
Sbjct: 172 MVSSAMYQANPSAPSSGGYDNYNA 195
>ref|XP_003572258.1| PREDICTED: uncharacterized protein LOC100822246 [Brachypodium
distachyon]
Length = 211
Score = 164 bits (416), Expect = 5e-38
Identities = 97/208 (46%), Positives = 110/208 (52%), Gaps = 16/208 (7%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSL+DQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLLDQRIKEHLGQAA 62
Query: 256 QQQMSAAFQQNLVAMQSG-QRPMRXXXXXXXXXXXXXXXXXXXXXRPPILQRP------- 411
Q+ A F Q+++ RP RPPIL P
Sbjct: 63 AFQVGAPFNQHMLQFPGNVPRPRLPILPTPMMPHGFPQQPGGPFARPPILPVPGAPGYPG 122
Query: 412 ------PVGPGFSMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAPPGSTAPRPSN-- 567
P GP SMPM AP+ PP P +G G P APPG N
Sbjct: 123 APTMPQPGGPPGSMPMQMAPLPRPPTLPPPTSGAP---GAPMSNNAAPPGPPPMYQQNQP 179
Query: 568 PTSSPLSNGHVPNGSVLPSSATYNYSAP 651
PT+ P S G P P A ++YS P
Sbjct: 180 PTAGPTS-GAPPPAPAAPPQAAFSYSQP 206
>ref|NP_001046503.1| Os02g0266100 [Oryza sativa Japonica Group]
gi|50251962|dbj|BAD27897.1| putative u1 small nuclear
ribonucleoprotein C [Oryza sativa Japonica Group]
gi|113536034|dbj|BAF08417.1| Os02g0266100 [Oryza sativa
Japonica Group] gi|125581580|gb|EAZ22511.1| hypothetical
protein OsJ_06175 [Oryza sativa Japonica Group]
gi|215686377|dbj|BAG87638.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215707035|dbj|BAG93495.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 228
Score = 164 bits (415), Expect = 6e-38
Identities = 102/229 (44%), Positives = 121/229 (52%), Gaps = 12/229 (5%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 62
Query: 256 QQQMSAAFQQNLVAMQSG----QRPMRXXXXXXXXXXXXXXXXXXXXXRPPILQRPPVGP 423
Q+ A F Q+L++ G + P+ RPPIL P + P
Sbjct: 63 AFQVGAPFNQHLLSFPGGVPRPRLPILPTPGMPLGVPQVPGAPLMPGVRPPILPAPGI-P 121
Query: 424 GF-------SMPM-GSAPILGPPGATPSPAGIAQPNGLPRPLTLAPPGSTAPRPSNPTSS 579
G+ +MP G+ P PPG+ P + Q LPRP TL PP S AP +
Sbjct: 122 GYPGAPNVPTMPQTGAPPGSMPPGSMPPGSMPMQMAPLPRPPTLPPPTSGAP------GA 175
Query: 580 PLSNGHVPNGSVLPSSATYNYSAPQVNYAQQNSVPQVSYVQQNSAPTIP 726
P+ N P A Y + PQ + P VS + P P
Sbjct: 176 PIPNSGAP-------PAMYQTNPPQPAGPTSGAPPPVSAPPPAAPPQAP 217
>ref|XP_004954569.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
C-1-like [Setaria italica]
Length = 265
Score = 164 bits (414), Expect = 8e-38
Identities = 99/206 (48%), Positives = 114/206 (55%), Gaps = 14/206 (6%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 41 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 100
Query: 256 QQQMSAAFQQNLV----AMQSGQRPMRXXXXXXXXXXXXXXXXXXXXXRPPILQRP--PV 417
Q+ A F Q+L+ AM + P+ RPPIL P P
Sbjct: 101 AFQVGAPFNQHLLSFPGAMARPRLPILPTPGMPHGFPQAPGAPLMPGVRPPILPAPGYPG 160
Query: 418 GPGFSMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAPPGST----APRPSNPTSSPL 585
GP G+ P + PPG A P +P+P APPGS AP P PT P
Sbjct: 161 GPPTMPQPGAPPTMPPPG--------APPGSMPQP--GAPPGSVPMQIAPLPRPPTLPPP 210
Query: 586 SNG----HVPNGSVLPSSATYNYSAP 651
++G +PN + PS N P
Sbjct: 211 TSGVPGAPIPNNAAPPSMFQTNPPPP 236
>gb|AFW65850.1| WW domain-binding protein 11 [Zea mays]
Length = 421
Score = 164 bits (414), Expect = 8e-38
Identities = 105/223 (47%), Positives = 118/223 (52%), Gaps = 6/223 (2%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 196 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 255
Query: 256 QQQMSAAFQQNLVAMQSGQRPMRXXXXXXXXXXXXXXXXXXXXXRPPILQRPPVGPGFSM 435
Q A F Q+L+A R P I RPP+ P
Sbjct: 256 AFQAGAPFNQHLLAFPGAMARPRLPILPTPGMPHGFPQAPGAPLMPGI--RPPILPAPGY 313
Query: 436 PMGSAPILGPPGATPS--PAGIAQPNGLPRPLTLAPPGS----TAPRPSNPTSSPLSNGH 597
P G P + PGA P P A P +P+P APPGS AP P PT P ++G
Sbjct: 314 P-GPPPTMQQPGAPPGSMPQPGAPPGSMPQP--GAPPGSMPMQMAPLPRPPTLPPPTSG- 369
Query: 598 VPNGSVLPSSATYNYSAPQVNYAQQNSVPQVSYVQQNSAPTIP 726
+P + N AP Y Q N PQ S + AP P
Sbjct: 370 ------VPGAPIPNSGAPPAIY-QAN--PQASAGPTSGAPPAP 403
>ref|NP_001131283.1| uncharacterized protein LOC100192596 [Zea mays]
gi|194691078|gb|ACF79623.1| unknown [Zea mays]
gi|195658989|gb|ACG48962.1| WW domain-binding protein 11
[Zea mays]
Length = 228
Score = 164 bits (414), Expect = 8e-38
Identities = 105/223 (47%), Positives = 118/223 (52%), Gaps = 6/223 (2%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 62
Query: 256 QQQMSAAFQQNLVAMQSGQRPMRXXXXXXXXXXXXXXXXXXXXXRPPILQRPPVGPGFSM 435
Q A F Q+L+A R P I RPP+ P
Sbjct: 63 AFQAGAPFNQHLLAFPGAMARPRLPILPTPGMPHGFPQAPGAPLMPGI--RPPILPAPGY 120
Query: 436 PMGSAPILGPPGATPS--PAGIAQPNGLPRPLTLAPPGS----TAPRPSNPTSSPLSNGH 597
P G P + PGA P P A P +P+P APPGS AP P PT P ++G
Sbjct: 121 P-GPPPTMQQPGAPPGSMPQPGAPPGSMPQP--GAPPGSMPMQMAPLPRPPTLPPPTSG- 176
Query: 598 VPNGSVLPSSATYNYSAPQVNYAQQNSVPQVSYVQQNSAPTIP 726
+P + N AP Y Q N PQ S + AP P
Sbjct: 177 ------VPGAPIPNSGAPPAIY-QAN--PQASAGPTSGAPPAP 210
>ref|XP_002453652.1| hypothetical protein SORBIDRAFT_04g009880 [Sorghum bicolor]
gi|363805507|sp|C5XZK6.1|RU1C1_SORBI RecName: Full=U1
small nuclear ribonucleoprotein C-1; Short=U1 snRNP C-1;
Short=U1-C-1; Short=U1C-1 gi|241933483|gb|EES06628.1|
hypothetical protein SORBIDRAFT_04g009880 [Sorghum
bicolor]
Length = 231
Score = 162 bits (410), Expect = 2e-37
Identities = 99/207 (47%), Positives = 118/207 (57%), Gaps = 15/207 (7%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 62
Query: 256 QQQMSAAFQQNLV----AMQSGQRPMRXXXXXXXXXXXXXXXXXXXXXRPPILQRPPVGP 423
Q A F Q+++ A+ + P+ RPPIL P + P
Sbjct: 63 AFQAGAPFNQHMLTFPGAVARPRLPILPTPGMPHGFPQAPGAPLMPGVRPPILPAPGI-P 121
Query: 424 GFSMPMGSAPIL---GPPGATPSPAGIAQPNGLPRPLTLAPPGS----TAPRPSNPTSSP 582
G+ P G +L PPG+ P P A P +P+P APPGS AP P PT P
Sbjct: 122 GY--PGGPPTMLQPGAPPGSMPQPG--APPGSMPQP--GAPPGSMPMQMAPLPRPPTLPP 175
Query: 583 LSNG----HVPNGSVLPSSATYNYSAP 651
++G +PN + P+ N AP
Sbjct: 176 PTSGVPGAPIPNSAAPPAIYQTNPPAP 202
>ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
small nuclear ribonucleoprotein C; Short=U1 snRNP C;
Short=U1-C; Short=U1C
Length = 213
Score = 161 bits (407), Expect = 5e-37
Identities = 91/175 (52%), Positives = 105/175 (60%), Gaps = 8/175 (4%)
Frame = +1
Query: 76 KYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQTF 255
+YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQR+KEHLGQT
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTA 62
Query: 256 Q-QQMSAAFQQNLVAMQSG-QRPM-----RXXXXXXXXXXXXXXXXXXXXXRPPILQRP- 411
QQ+ AA+ Q+LV+ RP RPP+L RP
Sbjct: 63 AFQQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPRPV 122
Query: 412 PVGPGFSMPMGSAPILGPPGATPSPAGIAQPNGLPRPLTLAPPGSTAPRPSNPTS 576
P PG+ G ++ PPGA P + N LPRP T+ P + S PTS
Sbjct: 123 PGAPGYMPAPGMPSMMAPPGAPSMP--MPPLNSLPRPPTMNVPPAVPGSTSTPTS 175