BLASTX nr result

ID: Ephedra28_contig00000965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00000965
         (498 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22795.1| unknown [Picea sitchensis] gi|116790476|gb|ABK256...    74   2e-11
ref|XP_006481358.1| PREDICTED: 60S ribosomal protein L27-like [C...    74   2e-11
ref|XP_004963680.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...    74   3e-11
gb|ADE76927.1| unknown [Picea sitchensis]                              74   3e-11
ref|NP_001146947.1| 60S ribosomal protein L27 [Zea mays] gi|1947...    74   3e-11
ref|XP_006661913.1| PREDICTED: 60S ribosomal protein L27-3-like ...    73   3e-11
ref|NP_001046570.1| Os02g0284600 [Oryza sativa Japonica Group] g...    73   3e-11
tpg|DAA35933.1| TPA: 60S ribosomal protein L27 [Zea mays]              73   3e-11
ref|NP_001131879.1| 60S ribosomal protein L27 [Zea mays] gi|1946...    73   3e-11
gb|ABK93484.1| unknown [Populus trichocarpa]                           73   3e-11
ref|XP_002300063.1| 60S ribosomal protein L27 [Populus trichocar...    73   5e-11
ref|XP_004241408.1| PREDICTED: 60S ribosomal protein L27-like [S...    72   6e-11
ref|XP_002437450.1| hypothetical protein SORBIDRAFT_10g027330 [S...    72   8e-11
ref|XP_002323180.1| ribosomal protein L27 [Populus trichocarpa] ...    72   8e-11
ref|XP_006656055.1| PREDICTED: 60S ribosomal protein L27-3-like ...    72   1e-10
gb|EOX93172.1| Ribosomal L27e protein family [Theobroma cacao]         71   1e-10
ref|NP_001065410.1| Os10g0564300 [Oryza sativa Japonica Group] g...    71   2e-10
gb|ACG47567.1| hypothetical protein [Zea mays]                         71   2e-10
gb|ABR25709.1| 60S ribosomal protein l27 [Oryza sativa Indica Gr...    71   2e-10
dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]                  70   3e-10

>gb|ABK22795.1| unknown [Picea sitchensis] gi|116790476|gb|ABK25628.1| unknown
           [Picea sitchensis]
          Length = 135

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 35/44 (79%), Positives = 36/44 (81%)
 Frame = -1

Query: 498 KTIVGADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           K +V  DKLETRDKKV A K VKAS EERFK GKNRWFFTKLRF
Sbjct: 92  KNVVSFDKLETRDKKVAALKGVKASFEERFKAGKNRWFFTKLRF 135


>ref|XP_006481358.1| PREDICTED: 60S ribosomal protein L27-like [Citrus sinensis]
          Length = 135

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -1

Query: 498 KTIVGADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           K +V AD L+++DKKVTACK  K  LEERFKTGKNRWFFTKLRF
Sbjct: 92  KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 135


>ref|XP_004963680.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L27-3-like
           [Setaria italica]
          Length = 231

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/40 (85%), Positives = 34/40 (85%)
 Frame = -1

Query: 486 GADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           G D L TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 192 GPDALSTRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 231


>gb|ADE76927.1| unknown [Picea sitchensis]
          Length = 135

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/44 (79%), Positives = 36/44 (81%)
 Frame = -1

Query: 498 KTIVGADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           K +V  DKLETRDKKV A K VKAS EERFK GKNRWFFTKLRF
Sbjct: 92  KNVVTFDKLETRDKKVAALKGVKASFEERFKAGKNRWFFTKLRF 135


>ref|NP_001146947.1| 60S ribosomal protein L27 [Zea mays] gi|194702524|gb|ACF85346.1|
           unknown [Zea mays] gi|195605688|gb|ACG24674.1| 60S
           ribosomal protein L27 [Zea mays]
           gi|195615444|gb|ACG29552.1| 60S ribosomal protein L27
           [Zea mays] gi|195620764|gb|ACG32212.1| 60S ribosomal
           protein L27 [Zea mays] gi|413943344|gb|AFW75993.1| 60S
           ribosomal protein L27 [Zea mays]
          Length = 137

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/40 (85%), Positives = 34/40 (85%)
 Frame = -1

Query: 486 GADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           G D L TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 98  GPDALSTRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 137


>ref|XP_006661913.1| PREDICTED: 60S ribosomal protein L27-3-like [Oryza brachyantha]
          Length = 137

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 34/40 (85%), Positives = 34/40 (85%)
 Frame = -1

Query: 486 GADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           G D L TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 98  GPDALATRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 137


>ref|NP_001046570.1| Os02g0284600 [Oryza sativa Japonica Group]
           gi|47847708|dbj|BAD21487.1| putative 60S ribosomal
           protein L27 [Oryza sativa Japonica Group]
           gi|47848339|dbj|BAD22201.1| putative 60S ribosomal
           protein L27 [Oryza sativa Japonica Group]
           gi|113536101|dbj|BAF08484.1| Os02g0284600 [Oryza sativa
           Japonica Group] gi|125538995|gb|EAY85390.1| hypothetical
           protein OsI_06769 [Oryza sativa Indica Group]
           gi|125581675|gb|EAZ22606.1| hypothetical protein
           OsJ_06275 [Oryza sativa Japonica Group]
           gi|215768337|dbj|BAH00566.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 137

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 34/40 (85%), Positives = 34/40 (85%)
 Frame = -1

Query: 486 GADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           G D L TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 98  GPDALATRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 137


>tpg|DAA35933.1| TPA: 60S ribosomal protein L27 [Zea mays]
          Length = 167

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 34/40 (85%), Positives = 34/40 (85%)
 Frame = -1

Query: 486 GADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           G D L TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 128 GPDALSTRDKKVEACKAAKARLEERFKTGKNRWFFTKLRF 167


>ref|NP_001131879.1| 60S ribosomal protein L27 [Zea mays] gi|194692804|gb|ACF80486.1|
           unknown [Zea mays] gi|195606040|gb|ACG24850.1| 60S
           ribosomal protein L27 [Zea mays]
           gi|195617436|gb|ACG30548.1| 60S ribosomal protein L27
           [Zea mays] gi|195624172|gb|ACG33916.1| 60S ribosomal
           protein L27 [Zea mays] gi|195628330|gb|ACG35995.1| 60S
           ribosomal protein L27 [Zea mays]
           gi|195634855|gb|ACG36896.1| 60S ribosomal protein L27
           [Zea mays] gi|195644732|gb|ACG41834.1| 60S ribosomal
           protein L27 [Zea mays] gi|413919581|gb|AFW59513.1| 60S
           ribosomal protein L27 [Zea mays]
          Length = 137

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 34/40 (85%), Positives = 34/40 (85%)
 Frame = -1

Query: 486 GADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           G D L TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 98  GPDALSTRDKKVEACKAAKARLEERFKTGKNRWFFTKLRF 137


>gb|ABK93484.1| unknown [Populus trichocarpa]
          Length = 135

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/44 (75%), Positives = 36/44 (81%)
 Frame = -1

Query: 498 KTIVGADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           K +V AD L T+DKK+TACK  KA  EERFKTGKNRWFFTKLRF
Sbjct: 92  KDVVTADYLSTKDKKITACKETKARFEERFKTGKNRWFFTKLRF 135


>ref|XP_002300063.1| 60S ribosomal protein L27 [Populus trichocarpa]
           gi|118481395|gb|ABK92640.1| unknown [Populus
           trichocarpa] gi|118483186|gb|ABK93497.1| unknown
           [Populus trichocarpa] gi|118484849|gb|ABK94291.1|
           unknown [Populus trichocarpa]
           gi|222847321|gb|EEE84868.1| 60S ribosomal protein L27
           [Populus trichocarpa]
          Length = 135

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 33/44 (75%), Positives = 36/44 (81%)
 Frame = -1

Query: 498 KTIVGADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           K +V AD L T+DKK+TACK  KA  EERFKTGKNRWFFTKLRF
Sbjct: 92  KDVVTADCLSTKDKKITACKETKARFEERFKTGKNRWFFTKLRF 135


>ref|XP_004241408.1| PREDICTED: 60S ribosomal protein L27-like [Solanum lycopersicum]
           gi|565361085|ref|XP_006347291.1| PREDICTED: 60S
           ribosomal protein L27-like [Solanum tuberosum]
          Length = 135

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/44 (77%), Positives = 36/44 (81%)
 Frame = -1

Query: 498 KTIVGADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           K +V AD L+ RDKKVTA K  KA LEERFKTGKNRWFFTKLRF
Sbjct: 92  KDVVNADVLQARDKKVTAAKETKARLEERFKTGKNRWFFTKLRF 135


>ref|XP_002437450.1| hypothetical protein SORBIDRAFT_10g027330 [Sorghum bicolor]
           gi|241915673|gb|EER88817.1| hypothetical protein
           SORBIDRAFT_10g027330 [Sorghum bicolor]
          Length = 137

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/40 (82%), Positives = 33/40 (82%)
 Frame = -1

Query: 486 GADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           G D L TRDKKV ACK  KA LEERFKTGKNRWFFTKLRF
Sbjct: 98  GPDALSTRDKKVAACKTAKARLEERFKTGKNRWFFTKLRF 137


>ref|XP_002323180.1| ribosomal protein L27 [Populus trichocarpa]
           gi|118483861|gb|ABK93821.1| unknown [Populus
           trichocarpa] gi|222867810|gb|EEF04941.1| ribosomal
           protein L27 [Populus trichocarpa]
          Length = 135

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/44 (77%), Positives = 35/44 (79%)
 Frame = -1

Query: 498 KTIVGADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           K  V AD L T+DKKVTACK  KA  EERFKTGKNRWFFTKLRF
Sbjct: 92  KDAVTADSLTTKDKKVTACKDTKARFEERFKTGKNRWFFTKLRF 135


>ref|XP_006656055.1| PREDICTED: 60S ribosomal protein L27-3-like [Oryza brachyantha]
          Length = 134

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 33/40 (82%), Positives = 34/40 (85%)
 Frame = -1

Query: 486 GADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           G + L TRDKKV ACKA KA LEERFKTGKNRWFFTKLRF
Sbjct: 95  GPEALATRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 134


>gb|EOX93172.1| Ribosomal L27e protein family [Theobroma cacao]
          Length = 135

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/44 (72%), Positives = 35/44 (79%)
 Frame = -1

Query: 498 KTIVGADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           K +V  D L+T+DKKV ACKA K   EERFKTGKNRWFFTKLRF
Sbjct: 92  KDVVTVDALQTKDKKVAACKATKERFEERFKTGKNRWFFTKLRF 135


>ref|NP_001065410.1| Os10g0564300 [Oryza sativa Japonica Group] gi|582044893|pdb|3J61|Z
           Chain Z, Localization Of The Large Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-em Map Of Triticum Aestivum
           Translating 80s Ribosome
           gi|12597895|gb|AAG60203.1|AC084763_23 putative ribosomal
           protein L27 [Oryza sativa Japonica Group]
           gi|31433546|gb|AAP55044.1| 60S ribosomal protein L27,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113639942|dbj|BAF27247.1| Os10g0564300 [Oryza sativa
           Japonica Group] gi|125532982|gb|EAY79547.1| hypothetical
           protein OsI_34676 [Oryza sativa Indica Group]
           gi|125575717|gb|EAZ17001.1| hypothetical protein
           OsJ_32486 [Oryza sativa Japonica Group]
           gi|149391867|gb|ABR25852.1| 60S ribosomal protein l27
           [Oryza sativa Indica Group] gi|215694733|dbj|BAG89924.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 136

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -1

Query: 486 GADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           G D L TRDKKV ACK+ KA LE+RFKTGKNRWFFTKLRF
Sbjct: 97  GPDALATRDKKVAACKSAKARLEDRFKTGKNRWFFTKLRF 136


>gb|ACG47567.1| hypothetical protein [Zea mays]
          Length = 57

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/40 (82%), Positives = 33/40 (82%)
 Frame = -1

Query: 486 GADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           G D L TRDKKV ACKA KA LEERFKTGKNRWFFT LRF
Sbjct: 18  GPDALSTRDKKVEACKAAKARLEERFKTGKNRWFFTXLRF 57


>gb|ABR25709.1| 60S ribosomal protein l27 [Oryza sativa Indica Group]
          Length = 82

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -1

Query: 486 GADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           G D L TRDKKV ACK+ KA LE+RFKTGKNRWFFTKLRF
Sbjct: 43  GPDALATRDKKVAACKSAKARLEDRFKTGKNRWFFTKLRF 82


>dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]
          Length = 135

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 33/44 (75%), Positives = 36/44 (81%)
 Frame = -1

Query: 498 KTIVGADKLETRDKKVTACKAVKASLEERFKTGKNRWFFTKLRF 367
           K +V  D L++RDKKVTA K  KA LEERFKTGKNRWFFTKLRF
Sbjct: 92  KDVVTVDCLQSRDKKVTAAKETKARLEERFKTGKNRWFFTKLRF 135


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