BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00000801
         (1387 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528545.1| nucleic acid binding protein, putative [Rici...   203   3e-66
ref|XP_004976662.1| PREDICTED: uncharacterized protein LOC101760...   202   1e-64
ref|NP_001149149.1| nucleic acid binding protein [Zea mays] gi|1...   197   4e-63
gb|ACN35186.1| unknown [Zea mays] gi|414585668|tpg|DAA36239.1| T...   197   4e-63
ref|XP_004300214.1| PREDICTED: uncharacterized protein LOC101299...   197   6e-63
ref|XP_002448441.1| hypothetical protein SORBIDRAFT_06g027200 [S...   194   4e-62
ref|XP_004969134.1| PREDICTED: uncharacterized protein LOC101753...   195   5e-62
ref|XP_004977834.1| PREDICTED: uncharacterized protein LOC101768...   193   6e-62
ref|NP_001053727.1| Os04g0594400 [Oryza sativa Japonica Group] g...   194   8e-62
ref|XP_006652732.1| PREDICTED: uncharacterized protein LOC102701...   192   1e-60
ref|XP_003580458.1| PREDICTED: uncharacterized protein LOC100836...   193   2e-60
ref|XP_002303431.1| RNA recognition motif-containing family prot...   188   3e-60
ref|XP_006652733.1| PREDICTED: uncharacterized protein LOC102701...   192   4e-60
tpg|DAA36238.1| TPA: putative RNA recognition motif containing f...   197   1e-59
ref|XP_002988214.1| hypothetical protein SELMODRAFT_47823 [Selag...   186   1e-59
ref|XP_002281499.2| PREDICTED: protein vip1-like [Vitis vinifera...   181   8e-59
gb|EOY01342.1| RNA-binding family protein isoform 2 [Theobroma c...   176   8e-59
ref|XP_001761484.1| predicted protein [Physcomitrella patens] gi...   178   8e-59
gb|EMJ22173.1| hypothetical protein PRUPE_ppa024222mg [Prunus pe...   186   1e-58
gb|EOY01341.1| RNA-binding family protein isoform 1 [Theobroma c...   176   1e-58

>ref|XP_002528545.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532047|gb|EEF33857.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 275

 Score =  203 bits (517), Expect(2) = 3e-66
 Identities = 102/174 (58%), Positives = 135/174 (77%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+DV+TSMLAKGF+LGKDA+ KAK FD+KH LT+ A+AKVVS+DKKIGLT+K++AG
Sbjct: 97  ALRKAEDVVTSMLAKGFILGKDAVNKAKTFDDKHQLTSTASAKVVSLDKKIGLTDKISAG 156

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           TT V+++V+ VD+K+QVSEKTK+AFAAAE+KV++AG A+MKNRY+ TGASWVTGAF++V 
Sbjct: 157 TTIVSDKVREVDQKFQVSEKTKTAFAAAEQKVSSAGVAIMKNRYVFTGASWVTGAFNKVA 216

Query: 637 KAAEDVALKSKEKVGMVEGNKSSHSNDSFQPSVHEPAAVALNSAADSTTYSSLP 798
           KAA +V  K+KEKVGM E  +     D F   VH   +   +S  +   +   P
Sbjct: 217 KAAGEVGQKAKEKVGMAEDEQKRKMVDDF-AQVHLSESPKASSEGEHLPFKPAP 269



 Score = 77.0 bits (188), Expect(2) = 3e-66
 Identities = 35/56 (62%), Positives = 49/56 (87%)
 Frame = +2

Query: 14  TVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           TVKV+NVSL AT+R++++FFSFSGDIE ++++RD E SQ+AYVT+KD Q  +TA+L
Sbjct: 5   TVKVSNVSLGATERDLREFFSFSGDIEYVEVRRDDEKSQIAYVTYKDSQGAETAVL 60


>ref|XP_004976662.1| PREDICTED: uncharacterized protein LOC101760478 [Setaria italica]
          Length = 316

 Score =  202 bits (513), Expect(2) = 1e-64
 Identities = 109/216 (50%), Positives = 150/216 (69%), Gaps = 14/216 (6%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+D++ +MLAKGF+LG+DA+ KAKA DEKH LT+ ATA+V S DK+IGL+EK++ G
Sbjct: 101 ALQKAEDIVGTMLAKGFILGRDALDKAKALDEKHQLTSTATARVSSFDKRIGLSEKISVG 160

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+AVN++VK +D+KYQVSEKTKSA AAAE+ V+TAGSA+MKNRY+LTGA+WVTGAFS+VT
Sbjct: 161 TSAVNDKVKEMDQKYQVSEKTKSALAAAEQSVSTAGSAIMKNRYVLTGAAWVTGAFSKVT 220

Query: 637 KAAEDVALKSKEKVG------MVEGNKSSHSNDSFQPSVH-----EPAAVALNSAADS-- 777
            AA DV  K+KEK+       +VEG  ++  +    P+ H     E A + ++   D   
Sbjct: 221 SAANDVGAKAKEKIAAEQEHKIVEGGSAAQPDIPEGPATHRELDGEFAKIHVSETPDDIP 280

Query: 778 -TTYSSLPRYDSGFSSQPLSETGEPNKAPPSQGHIL 882
            +T +++P       S+       P K  P+QG IL
Sbjct: 281 ISTVATVPAVIDEEPSKASPPADAPKKPEPAQGLIL 316



 Score = 73.2 bits (178), Expect(2) = 1e-64
 Identities = 35/59 (59%), Positives = 48/59 (81%)
 Frame = +2

Query: 5   MKNTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           M +TVKV+NVSL+A +R+I++FFSFSGDI  +++Q   E SQVAY+TFKD Q  +TA+L
Sbjct: 5   MFSTVKVSNVSLKAAQRDIKEFFSFSGDIVHVEMQSGDELSQVAYITFKDNQGAETAML 63


>ref|NP_001149149.1| nucleic acid binding protein [Zea mays] gi|195625094|gb|ACG34377.1|
           nucleic acid binding protein [Zea mays]
           gi|223943535|gb|ACN25851.1| unknown [Zea mays]
           gi|414585665|tpg|DAA36236.1| TPA: putative RNA
           recognition motif containing family protein [Zea mays]
          Length = 314

 Score =  197 bits (500), Expect(2) = 4e-63
 Identities = 104/204 (50%), Positives = 141/204 (69%), Gaps = 5/204 (2%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+D++ +MLAKGF+LG+DA+ KAKA DEKH LT+ ATA+V S DK+IGL+EK++ G
Sbjct: 101 ALQKAEDIVGTMLAKGFILGRDALDKAKALDEKHQLTSTATARVSSFDKRIGLSEKISVG 160

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+ VN++VK +D+KYQVSEKTKSA AAAE  V+TAGSA+MKNRY+LTGA+WVTGAFS+VT
Sbjct: 161 TSVVNDKVKEMDQKYQVSEKTKSALAAAEHSVSTAGSAIMKNRYVLTGAAWVTGAFSKVT 220

Query: 637 KAAEDVALKSKEKVGMVEGNKS-----SHSNDSFQPSVHEPAAVALNSAADSTTYSSLPR 801
            AA +   K+KEK+ + + +K+     + +N S     H       +   DS T   +P 
Sbjct: 221 SAANEAGAKAKEKIAVEQEHKNAEGGPAQANISETHEAHRGLDGGFSRLHDSETPEDIP- 279

Query: 802 YDSGFSSQPLSETGEPNKAPPSQG 873
                +S P     EP+KA P  G
Sbjct: 280 --ISTASVPAVTDEEPSKASPPAG 301



 Score = 73.2 bits (178), Expect(2) = 4e-63
 Identities = 35/59 (59%), Positives = 48/59 (81%)
 Frame = +2

Query: 5   MKNTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           M +TVKV+NVSL+A +R+I++FFSFSGDI  +++Q   E SQVAY+TFKD Q  +TA+L
Sbjct: 5   MLSTVKVSNVSLKAAQRDIKEFFSFSGDIVHVEMQSFDELSQVAYITFKDKQGAETAML 63


>gb|ACN35186.1| unknown [Zea mays] gi|414585668|tpg|DAA36239.1| TPA: putative RNA
           recognition motif containing family protein [Zea mays]
          Length = 310

 Score =  197 bits (500), Expect(2) = 4e-63
 Identities = 104/204 (50%), Positives = 141/204 (69%), Gaps = 5/204 (2%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+D++ +MLAKGF+LG+DA+ KAKA DEKH LT+ ATA+V S DK+IGL+EK++ G
Sbjct: 97  ALQKAEDIVGTMLAKGFILGRDALDKAKALDEKHQLTSTATARVSSFDKRIGLSEKISVG 156

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+ VN++VK +D+KYQVSEKTKSA AAAE  V+TAGSA+MKNRY+LTGA+WVTGAFS+VT
Sbjct: 157 TSVVNDKVKEMDQKYQVSEKTKSALAAAEHSVSTAGSAIMKNRYVLTGAAWVTGAFSKVT 216

Query: 637 KAAEDVALKSKEKVGMVEGNKS-----SHSNDSFQPSVHEPAAVALNSAADSTTYSSLPR 801
            AA +   K+KEK+ + + +K+     + +N S     H       +   DS T   +P 
Sbjct: 217 SAANEAGAKAKEKIAVEQEHKNAEGGPAQANISETHEAHRGLDGGFSRLHDSETPEDIP- 275

Query: 802 YDSGFSSQPLSETGEPNKAPPSQG 873
                +S P     EP+KA P  G
Sbjct: 276 --ISTASVPAVTDEEPSKASPPAG 297



 Score = 73.2 bits (178), Expect(2) = 4e-63
 Identities = 35/59 (59%), Positives = 48/59 (81%)
 Frame = +2

Query: 5   MKNTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           M +TVKV+NVSL+A +R+I++FFSFSGDI  +++Q   E SQVAY+TFKD Q  +TA+L
Sbjct: 1   MLSTVKVSNVSLKAAQRDIKEFFSFSGDIVHVEMQSFDELSQVAYITFKDKQGAETAML 59


>ref|XP_004300214.1| PREDICTED: uncharacterized protein LOC101299868 [Fragaria vesca
           subsp. vesca]
          Length = 273

 Score =  197 bits (500), Expect(2) = 6e-63
 Identities = 96/155 (61%), Positives = 124/155 (80%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+DV+T MLAKGF+LGKDA+ KAK FDEKH LT+ A+ KV S DKKIGLTEK++ G
Sbjct: 101 ALRKAEDVVTGMLAKGFILGKDAVNKAKGFDEKHQLTSTASEKVASFDKKIGLTEKISVG 160

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+ V+E+V+ VD+K+QVSEKTKSAFAAAE+ V+ AGSA+MKNRY+ T A+WV+GAF++V 
Sbjct: 161 TSVVSEKVREVDQKFQVSEKTKSAFAAAEQTVSNAGSAIMKNRYVFTSAAWVSGAFNKVA 220

Query: 637 KAAEDVALKSKEKVGMVEGNKSSHSNDSFQPSVHE 741
           KAA +V  K+KEKVGMVE  K+    D +   + E
Sbjct: 221 KAAGEVGQKTKEKVGMVEEEKNRQIEDDYAQVLSE 255



 Score = 72.8 bits (177), Expect(2) = 6e-63
 Identities = 33/56 (58%), Positives = 47/56 (83%)
 Frame = +2

Query: 14  TVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           T+KV+N+SL A++R+I++FFSFSGDI  +++  DTE SQ+AYVTFKD Q  +TA+L
Sbjct: 5   TIKVSNLSLGASERDIKEFFSFSGDIAYVEMHSDTERSQIAYVTFKDVQGAETAVL 60


>ref|XP_002448441.1| hypothetical protein SORBIDRAFT_06g027200 [Sorghum bicolor]
           gi|241939624|gb|EES12769.1| hypothetical protein
           SORBIDRAFT_06g027200 [Sorghum bicolor]
          Length = 314

 Score =  194 bits (494), Expect(2) = 4e-62
 Identities = 96/159 (60%), Positives = 132/159 (83%), Gaps = 1/159 (0%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+D++ +MLAKGF+LG+DA+ KAKA DEKH LT+ ATA+V S DK+IGL+EK++ G
Sbjct: 101 ALQKAEDIVGTMLAKGFILGRDALDKAKALDEKHQLTSTATARVSSFDKRIGLSEKISVG 160

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+ VN++VK +D+KYQVSEKTKSA AAAE+ V+TAGSA+MKNRY+LTGA+WVTGAFS+VT
Sbjct: 161 TSVVNDKVKEMDQKYQVSEKTKSALAAAEQSVSTAGSAIMKNRYVLTGAAWVTGAFSKVT 220

Query: 637 KAAEDVALKSKEKVGMVEGNKSSHSNDSFQPSVHE-PAA 750
            AA DV  K+KEK+ + + +K++ +  + Q ++ E PAA
Sbjct: 221 SAANDVGAKAKEKIAVEQEHKNAEAGPA-QANISEFPAA 258



 Score = 72.4 bits (176), Expect(2) = 4e-62
 Identities = 34/57 (59%), Positives = 47/57 (82%)
 Frame = +2

Query: 11  NTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           +TVKV+NVSL+A +R+I++FFSFSGDI  +++Q   E SQVAY+TFKD Q  +TA+L
Sbjct: 7   STVKVSNVSLKAAQRDIKEFFSFSGDIVHVEMQSGDELSQVAYITFKDNQGAETAML 63


>ref|XP_004969134.1| PREDICTED: uncharacterized protein LOC101753533 [Setaria italica]
          Length = 312

 Score =  195 bits (495), Expect(2) = 5e-62
 Identities = 103/217 (47%), Positives = 146/217 (67%), Gaps = 15/217 (6%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+D++ +MLAKGF+LG+DA+ KAKA DEKH LT+ ATA+  S DK+ GL+EK++ G
Sbjct: 97  ALQKAEDIVGTMLAKGFILGRDALDKAKALDEKHQLTSTATARASSFDKRFGLSEKISVG 156

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+AVN++VK +D+KYQVSEKTKSA AAAE+ V+T GSA+MKNRY+LTGA+WVTGAFS+VT
Sbjct: 157 TSAVNDKVKEMDQKYQVSEKTKSALAAAEQSVSTVGSAIMKNRYVLTGAAWVTGAFSKVT 216

Query: 637 KAAEDVALKSKEKVGMVEGNKSSHSNDSFQPSVHEP-----------AAVALNSAADSTT 783
            AA DV  K+KEK+   + +K+     + QP + E            A + ++   +   
Sbjct: 217 SAANDVGAKAKEKIAAEQEHKNVEGGSAAQPDIPEGPTTHREVDGEFAKIHVSETPEDIP 276

Query: 784 YSSLPRYDSGFSSQPLSETGEPNKAP----PSQGHIL 882
            S++    +  + +P S+   P  AP    P+ G IL
Sbjct: 277 ISTVATVPAVINEEP-SKVSPPADAPKKPEPAHGLIL 312



 Score = 71.6 bits (174), Expect(2) = 5e-62
 Identities = 34/59 (57%), Positives = 47/59 (79%)
 Frame = +2

Query: 5   MKNTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           M +TVKV+NVSL+A +R+I++FFSFSGDI  +++Q   E SQVAY+TFKD Q  +T +L
Sbjct: 1   MFSTVKVSNVSLKAVQRDIKEFFSFSGDIVHVEMQSGDELSQVAYITFKDNQGAETTIL 59


>ref|XP_004977834.1| PREDICTED: uncharacterized protein LOC101768874 [Setaria italica]
          Length = 273

 Score =  193 bits (491), Expect(2) = 6e-62
 Identities = 93/155 (60%), Positives = 122/155 (78%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+D+  +MLAKGF+LG+DA+ KAKA DEKH LT+ ATA+  S DK+IGL+EK+  G
Sbjct: 100 ALQKAEDIAGTMLAKGFILGRDALDKAKALDEKHQLTSTATARASSFDKRIGLSEKINVG 159

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+AVN++VK +D+KYQVSEKTKSA AAAE+ V+T GSA+MKNRY+LTGA WVTGAFS+VT
Sbjct: 160 TSAVNDKVKEMDQKYQVSEKTKSALAAAEQSVSTVGSAIMKNRYVLTGAPWVTGAFSKVT 219

Query: 637 KAAEDVALKSKEKVGMVEGNKSSHSNDSFQPSVHE 741
            AA DV  K+KEK+   + +K+     + QP + E
Sbjct: 220 SAANDVGAKAKEKIAAEQEHKNVEGGSAAQPDIPE 254



 Score = 72.8 bits (177), Expect(2) = 6e-62
 Identities = 35/59 (59%), Positives = 47/59 (79%)
 Frame = +2

Query: 5   MKNTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           M +TVKV+NVSL+A +R+I +FFSFSGDI  +++Q   E SQVAY+TFKD Q  +TA+L
Sbjct: 1   MFSTVKVSNVSLKAVQRDIMEFFSFSGDIVHVEMQSGDELSQVAYITFKDNQGAETAIL 59


>ref|NP_001053727.1| Os04g0594400 [Oryza sativa Japonica Group]
           gi|32489377|emb|CAE04149.1| OSJNBa0009P12.34 [Oryza
           sativa Japonica Group] gi|58532021|emb|CAD41559.3|
           OSJNBa0006A01.14 [Oryza sativa Japonica Group]
           gi|113565298|dbj|BAF15641.1| Os04g0594400 [Oryza sativa
           Japonica Group] gi|116311054|emb|CAH67985.1|
           OSIGBa0142I02-OSIGBa0101B20.28 [Oryza sativa Indica
           Group] gi|125549561|gb|EAY95383.1| hypothetical protein
           OsI_17216 [Oryza sativa Indica Group]
           gi|125591487|gb|EAZ31837.1| hypothetical protein
           OsJ_15998 [Oryza sativa Japonica Group]
           gi|215695041|dbj|BAG90232.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 314

 Score =  194 bits (494), Expect(2) = 8e-62
 Identities = 105/215 (48%), Positives = 150/215 (69%), Gaps = 13/215 (6%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+D++ +MLAKGF+LG+DA+ +AKA DEKH LT+ ATA+V S DKK+GL+EK++ G
Sbjct: 101 ALQKAEDIVGTMLAKGFILGRDALDRAKALDEKHQLTSTATARVSSFDKKMGLSEKISVG 160

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+AVN++VK +D+KYQVSEKT+SA AAAE+ V+TAGSA+MKNRY+LTGA+WVTGAF++V 
Sbjct: 161 TSAVNDKVKEMDQKYQVSEKTRSALAAAEQSVSTAGSAIMKNRYVLTGAAWVTGAFNKVA 220

Query: 637 KAAEDVALKSKEKVGMVEGNK----------SSHSNDSFQPSVHEPAAVALNSAADS--- 777
            AA DV  K+KEK+   + +K          SS  + + +    E A + ++ + +    
Sbjct: 221 NAANDVGTKAKEKIASEQEHKTVELESAEPNSSEGHGTQKDVDGEFAKIQVSESPEDIPI 280

Query: 778 TTYSSLPRYDSGFSSQPLSETGEPNKAPPSQGHIL 882
           +T +++P  D   SSQ       P K  P+QG IL
Sbjct: 281 STTATVPITDED-SSQASPPAASPKKPEPAQGLIL 314



 Score = 71.2 bits (173), Expect(2) = 8e-62
 Identities = 33/57 (57%), Positives = 47/57 (82%)
 Frame = +2

Query: 11  NTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           +TVKV+NVSL+A+ R++++FFSFSGDI  +++Q   E SQVAY+TFKD Q  +TA+L
Sbjct: 7   STVKVSNVSLKASLRDVKEFFSFSGDIVHVEMQSSDELSQVAYITFKDNQGSETAML 63


>ref|XP_006652732.1| PREDICTED: uncharacterized protein LOC102701535 isoform X1 [Oryza
           brachyantha]
          Length = 314

 Score =  192 bits (488), Expect(2) = 1e-60
 Identities = 105/216 (48%), Positives = 150/216 (69%), Gaps = 14/216 (6%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+D++ +MLAKGF+LG+DA+ +AKA DEKH L++ ATA+V S DKKIGL+EK++ G
Sbjct: 101 ALQKAEDIVGTMLAKGFILGRDALDRAKALDEKHQLSSTATARVSSFDKKIGLSEKISVG 160

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+ VN++VK +D+KYQVSEKTKSA AAAE+ V+TAGSA+MKNRY+LTGA+WVTGAF++V 
Sbjct: 161 TSVVNDKVKEMDQKYQVSEKTKSALAAAEQSVSTAGSAIMKNRYVLTGAAWVTGAFNKVA 220

Query: 637 KAAEDVALKSKEKVGMVEGNKSSHSNDSFQPSVHEP-----------AAVALNSAADS-- 777
            AA DV  K+KEK+   + +K+   ++S QP+  E            A + ++ + +   
Sbjct: 221 NAANDVGTKAKEKIAAEQEHKTV-EHESAQPNSSEGHSTQKDLDGDFAKIQVSESPEDIP 279

Query: 778 -TTYSSLPRYDSGFSSQPLSETGEPNKAPPSQGHIL 882
            +T +++P  D    SQ       P K  P+QG IL
Sbjct: 280 ISTTATVPITDDD-PSQASPPATAPKKPEPAQGLIL 314



 Score = 69.7 bits (169), Expect(2) = 1e-60
 Identities = 32/57 (56%), Positives = 46/57 (80%)
 Frame = +2

Query: 11  NTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           +TVKV+NVSL+A+ R++++FFSFSGDI  +++Q   E SQ AY+TFKD Q  +TA+L
Sbjct: 7   STVKVSNVSLKASLRDVKEFFSFSGDIVHVEMQSSDELSQAAYITFKDNQGSETAML 63


>ref|XP_003580458.1| PREDICTED: uncharacterized protein LOC100836920 [Brachypodium
           distachyon]
          Length = 314

 Score =  193 bits (491), Expect(2) = 2e-60
 Identities = 106/215 (49%), Positives = 145/215 (67%), Gaps = 14/215 (6%)
 Frame = +1

Query: 280 INKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAGT 459
           + KA+D++ +MLAKGF+LG+DA+ KAKA DEKH LT+ ATA+V S DK+IGL+EK++ G+
Sbjct: 102 LEKAEDIVGTMLAKGFILGRDALDKAKALDEKHQLTSTATARVSSFDKRIGLSEKISVGS 161

Query: 460 TAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVTK 639
           + VN++VK +D+KY VSEKTKSA AAAE+ V+TAGSA+MKNRY+LTGA+WVTGAFS+V  
Sbjct: 162 SVVNDKVKEMDQKYLVSEKTKSALAAAEQGVSTAGSAIMKNRYVLTGAAWVTGAFSKVAN 221

Query: 640 AAEDVALKSKEKV-----GMVEGNKSSHSNDSFQPSVHEPAAVALNSAADSTTYSSLPRY 804
           AA DV  K+KEK+     G     +S+  N S  P+ H+ +         S T   +P  
Sbjct: 222 AANDVGAKAKEKIVAEQEGKTVERESAQGNISDDPAKHKDSDDDFAKVHVSETTEDIP-- 279

Query: 805 DSGFSSQPLSETGEPNKAP---------PSQGHIL 882
            S  ++ P++E G  N  P         P+QG IL
Sbjct: 280 ISRAATVPITEEGSSNATPLPPAPKKPEPAQGLIL 314



 Score = 68.2 bits (165), Expect(2) = 2e-60
 Identities = 31/57 (54%), Positives = 46/57 (80%)
 Frame = +2

Query: 11  NTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           +TV V+N+SL+A +R++++FFSFSGDI  +++Q   E SQVAY+TFKD Q  +TA+L
Sbjct: 7   STVMVSNLSLKAAQRDVKEFFSFSGDILHVEMQSADELSQVAYITFKDKQGAETAIL 63


>ref|XP_002303431.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222840863|gb|EEE78410.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 276

 Score =  188 bits (477), Expect(2) = 3e-60
 Identities = 106/202 (52%), Positives = 139/202 (68%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A++KA+DV+T MLAKGF+LGKDA+ KAK+FDEKH LT+ A+AKV S+DKKIGLTEK++A 
Sbjct: 105 ALHKAEDVVTGMLAKGFILGKDAINKAKSFDEKHQLTSTASAKVASLDKKIGLTEKISAS 164

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           TT V ++V+ VD+K+QVSEKTK A AAAE+KV++AGSA+M NRY+ TGA+WVTG F++V 
Sbjct: 165 TTVVGDKVREVDQKFQVSEKTKLALAAAEQKVSSAGSAIMSNRYVFTGAAWVTGTFNKVA 224

Query: 637 KAAEDVALKSKEKVGMVEGNKSSHSNDSFQPSVHEPAAVALNSAADSTTYSSLPRYDSGF 816
           KAA       KEKVGM E  +     D +       A V L+ +  +          SG 
Sbjct: 225 KAA-------KEKVGMSEEEQKRKMVDDY-------AQVHLSESPKA----------SGE 260

Query: 817 SSQPLSETGEPNKAPPSQGHIL 882
           S Q      +P+K PP+QG IL
Sbjct: 261 SEQ------QPSKPPPAQGLIL 276



 Score = 72.4 bits (176), Expect(2) = 3e-60
 Identities = 32/56 (57%), Positives = 48/56 (85%)
 Frame = +2

Query: 14  TVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           TVKV+NVSL A+++++++FFSFSGDIE ++++ + E SQ+AYV+FKD Q  DTA+L
Sbjct: 9   TVKVSNVSLGASEQDLKEFFSFSGDIEYVEMKSENEQSQIAYVSFKDSQGADTAVL 64


>ref|XP_006652733.1| PREDICTED: uncharacterized protein LOC102701535 isoform X2 [Oryza
           brachyantha]
          Length = 313

 Score =  192 bits (488), Expect(2) = 4e-60
 Identities = 105/216 (48%), Positives = 150/216 (69%), Gaps = 14/216 (6%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+D++ +MLAKGF+LG+DA+ +AKA DEKH L++ ATA+V S DKKIGL+EK++ G
Sbjct: 100 ALQKAEDIVGTMLAKGFILGRDALDRAKALDEKHQLSSTATARVSSFDKKIGLSEKISVG 159

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+ VN++VK +D+KYQVSEKTKSA AAAE+ V+TAGSA+MKNRY+LTGA+WVTGAF++V 
Sbjct: 160 TSVVNDKVKEMDQKYQVSEKTKSALAAAEQSVSTAGSAIMKNRYVLTGAAWVTGAFNKVA 219

Query: 637 KAAEDVALKSKEKVGMVEGNKSSHSNDSFQPSVHEP-----------AAVALNSAADS-- 777
            AA DV  K+KEK+   + +K+   ++S QP+  E            A + ++ + +   
Sbjct: 220 NAANDVGTKAKEKIAAEQEHKTV-EHESAQPNSSEGHSTQKDLDGDFAKIQVSESPEDIP 278

Query: 778 -TTYSSLPRYDSGFSSQPLSETGEPNKAPPSQGHIL 882
            +T +++P  D    SQ       P K  P+QG IL
Sbjct: 279 ISTTATVPITDDD-PSQASPPATAPKKPEPAQGLIL 313



 Score = 67.8 bits (164), Expect(2) = 4e-60
 Identities = 33/57 (57%), Positives = 47/57 (82%)
 Frame = +2

Query: 11  NTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           +TVKV+NVSL+A+ R++++FFSFSGDI  +++Q D E SQ AY+TFKD Q  +TA+L
Sbjct: 7   STVKVSNVSLKASLRDVKEFFSFSGDIVHVEMQSD-ELSQAAYITFKDNQGSETAML 62


>tpg|DAA36238.1| TPA: putative RNA recognition motif containing family protein [Zea
           mays]
          Length = 338

 Score =  197 bits (500), Expect(2) = 1e-59
 Identities = 104/204 (50%), Positives = 141/204 (69%), Gaps = 5/204 (2%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ KA+D++ +MLAKGF+LG+DA+ KAKA DEKH LT+ ATA+V S DK+IGL+EK++ G
Sbjct: 125 ALQKAEDIVGTMLAKGFILGRDALDKAKALDEKHQLTSTATARVSSFDKRIGLSEKISVG 184

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+ VN++VK +D+KYQVSEKTKSA AAAE  V+TAGSA+MKNRY+LTGA+WVTGAFS+VT
Sbjct: 185 TSVVNDKVKEMDQKYQVSEKTKSALAAAEHSVSTAGSAIMKNRYVLTGAAWVTGAFSKVT 244

Query: 637 KAAEDVALKSKEKVGMVEGNKS-----SHSNDSFQPSVHEPAAVALNSAADSTTYSSLPR 801
            AA +   K+KEK+ + + +K+     + +N S     H       +   DS T   +P 
Sbjct: 245 SAANEAGAKAKEKIAVEQEHKNAEGGPAQANISETHEAHRGLDGGFSRLHDSETPEDIP- 303

Query: 802 YDSGFSSQPLSETGEPNKAPPSQG 873
                +S P     EP+KA P  G
Sbjct: 304 --ISTASVPAVTDEEPSKASPPAG 325



 Score = 62.0 bits (149), Expect(2) = 1e-59
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 24/83 (28%)
 Frame = +2

Query: 5   MKNTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDT---------------------- 118
           M +TVKV+NVSL+A +R+I++FFSFSGDI  +++QR                        
Sbjct: 5   MLSTVKVSNVSLKAAQRDIKEFFSFSGDIVHVEMQRLVPYMWCLFFTLCYDMINYLVLCS 64

Query: 119 --EDSQVAYVTFKDPQALDTALL 181
             E SQVAY+TFKD Q  +TA+L
Sbjct: 65  FDELSQVAYITFKDKQGAETAML 87


>ref|XP_002988214.1| hypothetical protein SELMODRAFT_47823 [Selaginella moellendorffii]
           gi|300143946|gb|EFJ10633.1| hypothetical protein
           SELMODRAFT_47823 [Selaginella moellendorffii]
          Length = 236

 Score =  186 bits (472), Expect(2) = 1e-59
 Identities = 92/132 (69%), Positives = 114/132 (86%)
 Frame = +1

Query: 283 NKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAGTT 462
           NKAQ V+T+MLAKGFVLGKDAM KAKAFD+KH  TA+ATA +  +DKKIG  EK+ AGT 
Sbjct: 101 NKAQAVITTMLAKGFVLGKDAMGKAKAFDDKHRFTASATATMADIDKKIGFREKINAGTA 160

Query: 463 AVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVTKA 642
           AVN+ V++VD+K+QVSEKTK+AF  AE+K+++AGSALMKN+YI TGASWVTGAF++V KA
Sbjct: 161 AVNQGVRAVDQKFQVSEKTKTAFTTAEQKMSSAGSALMKNKYIFTGASWVTGAFNKVAKA 220

Query: 643 AEDVALKSKEKV 678
           A DV+ K+KEKV
Sbjct: 221 ANDVSQKTKEKV 232



 Score = 72.8 bits (177), Expect(2) = 1e-59
 Identities = 36/63 (57%), Positives = 51/63 (80%), Gaps = 6/63 (9%)
 Frame = +2

Query: 11  NTVKVTNVSLRATKREIQDFFSFSGDIESIDLQR------DTEDSQVAYVTFKDPQALDT 172
           NTV+VTN+S+RAT+++I +FFSFSG+I++++L+R          SQVA+VTFKDP A+DT
Sbjct: 6   NTVRVTNLSIRATQQDILNFFSFSGEIQNVELERQHFFLFSNFSSQVAHVTFKDPDAVDT 65

Query: 173 ALL 181
           ALL
Sbjct: 66  ALL 68


>ref|XP_002281499.2| PREDICTED: protein vip1-like [Vitis vinifera]
           gi|297737602|emb|CBI26803.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  181 bits (459), Expect(2) = 8e-59
 Identities = 92/164 (56%), Positives = 122/164 (74%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A+ K +DV+++MLAKGFVLGKDA+ KAKAFDE+H L +NA+A V S+D+K+GL+EKL+ G
Sbjct: 128 AVKKGEDVVSTMLAKGFVLGKDAINKAKAFDEQHHLVSNASATVASIDRKMGLSEKLSIG 187

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T  VNE+VK +DE+YQV EKTKSA A AE+K + AGSA+M N Y+ TGASWV+ A S VT
Sbjct: 188 TAVVNEKVKEMDERYQVFEKTKSALAIAEQKASIAGSAIMNNHYVATGASWVSSALSMVT 247

Query: 637 KAAEDVALKSKEKVGMVEGNKSSHSNDSFQPSVHEPAAVALNSA 768
           KAAEDV++ ++EKVG  E  K           V+E A + L+ +
Sbjct: 248 KAAEDVSVMTREKVGRAEEEKKEIIYREKMGFVNEYAQIHLDES 291



 Score = 74.7 bits (182), Expect(2) = 8e-59
 Identities = 33/56 (58%), Positives = 48/56 (85%)
 Frame = +2

Query: 14  TVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           TVKV+N+SL  T+R+I++FFSFSGDI+ +++QR+ E +Q+AYVTFK+ Q  DTA+L
Sbjct: 33  TVKVSNISLAVTERDIKEFFSFSGDIQYVEMQREAEKTQLAYVTFKNSQGADTAVL 88


>gb|EOY01342.1| RNA-binding family protein isoform 2 [Theobroma cacao]
          Length = 282

 Score =  176 bits (445), Expect(2) = 8e-59
 Identities = 85/140 (60%), Positives = 114/140 (81%)
 Frame = +1

Query: 280 INKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAGT 459
           + KA+DVM++MLAKGFVLGKDA+ KAKAFDE+H  T+NA+A V S+D+K+GL+EKL+ GT
Sbjct: 100 VKKAEDVMSTMLAKGFVLGKDAINKAKAFDERHHFTSNASAAVTSIDQKMGLSEKLSIGT 159

Query: 460 TAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVTK 639
             VNE+++ ++E +QVSEKTKSAFA AE+K ++AG+A+M NRY+ TGA W++ AFS V K
Sbjct: 160 AVVNEKMREMNEIFQVSEKTKSAFAVAEQKASSAGTAIMSNRYVSTGALWLSNAFSAVAK 219

Query: 640 AAEDVALKSKEKVGMVEGNK 699
           AAEDV + +KEKV   E  K
Sbjct: 220 AAEDVGMLTKEKVEKAEEEK 239



 Score = 80.1 bits (196), Expect(2) = 8e-59
 Identities = 36/59 (61%), Positives = 52/59 (88%)
 Frame = +2

Query: 5   MKNTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           M  TVKV+N+SL A++R+I++FFSFSGDI+ ++++R+TE++QVAYVTFKD Q  DTA+L
Sbjct: 1   MIRTVKVSNISLAASQRDIKEFFSFSGDIQYVEMRRETENAQVAYVTFKDSQGADTAML 59


>ref|XP_001761484.1| predicted protein [Physcomitrella patens]
           gi|162687168|gb|EDQ73552.1| predicted protein
           [Physcomitrella patens]
          Length = 231

 Score =  178 bits (451), Expect(2) = 8e-59
 Identities = 86/136 (63%), Positives = 112/136 (82%)
 Frame = +1

Query: 283 NKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAGTT 462
           N+A DV+ +MLA+GF+LGKDA++KAK FD KH L+A+A + VV+ DK  G++EKL AGT 
Sbjct: 93  NQAVDVVATMLARGFILGKDALSKAKEFDAKHDLSASAKSSVVNFDKNTGISEKLNAGTA 152

Query: 463 AVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVTKA 642
            VN+++K+VDEKYQVSEKT++  A AEEKV+TAGS LM NRY+LTGA WVTGAFSRV K 
Sbjct: 153 VVNQQMKAVDEKYQVSEKTRAVLAVAEEKVSTAGSVLMNNRYLLTGARWVTGAFSRVQKV 212

Query: 643 AEDVALKSKEKVGMVE 690
           A +V+ K+KEK G++E
Sbjct: 213 AAEVSQKTKEKAGIME 228



 Score = 77.8 bits (190), Expect(2) = 8e-59
 Identities = 39/57 (68%), Positives = 49/57 (85%)
 Frame = +2

Query: 11  NTVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           NTV+VTN+S +AT  +I DFFSFSG+I +I+LQR + DSQ+A VTFK+PQALDTALL
Sbjct: 1   NTVRVTNISEKATAHDIHDFFSFSGEIVNIELQR-SNDSQIALVTFKEPQALDTALL 56


>gb|EMJ22173.1| hypothetical protein PRUPE_ppa024222mg [Prunus persica]
          Length = 260

 Score =  186 bits (471), Expect(2) = 1e-58
 Identities = 96/157 (61%), Positives = 123/157 (78%), Gaps = 1/157 (0%)
 Frame = +1

Query: 277 AINKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAG 456
           A   A+DV++SMLAKGFVLGKDA+ KAKAFDEKH LT+ ATA V S+D+KIG TEK++AG
Sbjct: 101 AAQNAEDVVSSMLAKGFVLGKDAINKAKAFDEKHQLTSTATATVTSLDQKIGFTEKISAG 160

Query: 457 TTAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVT 636
           T+ VN++V+ +DEK+QVSEKTK+AF+AAE+ V++AGSA+MKNRYILTG SWVTGA++R  
Sbjct: 161 TSMVNDKVREMDEKFQVSEKTKNAFSAAEQTVSSAGSAIMKNRYILTGTSWVTGAYNRAA 220

Query: 637 KAAEDVALKSKEKVGM-VEGNKSSHSNDSFQPSVHEP 744
           KAA +V  K+ +KV    EG K    +   Q  VH P
Sbjct: 221 KAAGEVGQKTMDKVSAEEEGGKKVEGSQITQ--VHSP 255



 Score = 69.7 bits (169), Expect(2) = 1e-58
 Identities = 32/56 (57%), Positives = 46/56 (82%)
 Frame = +2

Query: 14  TVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           TVKV NVSL AT+ ++++FF FSG+IE I++Q D E SQ+AYVTFK+P+  +T++L
Sbjct: 5   TVKVNNVSLGATENDLKEFFCFSGEIEYIEIQGDNERSQLAYVTFKNPKGAETSVL 60


>gb|EOY01341.1| RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 311

 Score =  176 bits (445), Expect(2) = 1e-58
 Identities = 85/140 (60%), Positives = 114/140 (81%)
 Frame = +1

Query: 280 INKAQDVMTSMLAKGFVLGKDAMTKAKAFDEKHGLTANATAKVVSMDKKIGLTEKLAAGT 459
           + KA+DVM++MLAKGFVLGKDA+ KAKAFDE+H  T+NA+A V S+D+K+GL+EKL+ GT
Sbjct: 129 VKKAEDVMSTMLAKGFVLGKDAINKAKAFDERHHFTSNASAAVTSIDQKMGLSEKLSIGT 188

Query: 460 TAVNERVKSVDEKYQVSEKTKSAFAAAEEKVNTAGSALMKNRYILTGASWVTGAFSRVTK 639
             VNE+++ ++E +QVSEKTKSAFA AE+K ++AG+A+M NRY+ TGA W++ AFS V K
Sbjct: 189 AVVNEKMREMNEIFQVSEKTKSAFAVAEQKASSAGTAIMSNRYVSTGALWLSNAFSAVAK 248

Query: 640 AAEDVALKSKEKVGMVEGNK 699
           AAEDV + +KEKV   E  K
Sbjct: 249 AAEDVGMLTKEKVEKAEEEK 268



 Score = 79.3 bits (194), Expect(2) = 1e-58
 Identities = 35/56 (62%), Positives = 51/56 (91%)
 Frame = +2

Query: 14  TVKVTNVSLRATKREIQDFFSFSGDIESIDLQRDTEDSQVAYVTFKDPQALDTALL 181
           TVKV+N+SL A++R+I++FFSFSGDI+ ++++R+TE++QVAYVTFKD Q  DTA+L
Sbjct: 33  TVKVSNISLAASQRDIKEFFSFSGDIQYVEMRRETENAQVAYVTFKDSQGADTAML 88