BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00000782
         (690 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006402040.1| hypothetical protein EUTSA_v10012603mg [Eutr...   352   5e-95
ref|XP_006279971.1| hypothetical protein CARUB_v10025837mg [Caps...   352   5e-95
ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata ...   352   5e-95
ref|XP_001779162.1| predicted protein [Physcomitrella patens] gi...   352   8e-95
ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ...   351   1e-94
ref|XP_001756645.1| predicted protein [Physcomitrella patens] gi...   350   2e-94
ref|XP_006404210.1| hypothetical protein EUTSA_v10010105mg [Eutr...   345   8e-93
emb|CAB87915.1| AtClpC [Arabidopsis thaliana]                         345   1e-92
ref|XP_006290259.1| hypothetical protein CARUB_v10016640mg [Caps...   345   1e-92
ref|NP_566912.2| Clp ATPase [Arabidopsis thaliana] gi|75213256|s...   345   1e-92
ref|NP_001190035.1| Clp ATPase [Arabidopsis thaliana] gi|3326449...   345   1e-92
gb|AAC04687.1| ClpC [Arabidopsis thaliana]                            343   3e-92
ref|XP_006290258.1| hypothetical protein CARUB_v10016640mg [Caps...   339   5e-91
ref|XP_002877635.1| AtClpC [Arabidopsis lyrata subsp. lyrata] gi...   339   5e-91
sp|P46523.1|CLPA_BRANA RecName: Full=ATP-dependent Clp protease ...   332   7e-89
ref|XP_002952540.1| hypothetical protein VOLCADRAFT_75431 [Volvo...   330   3e-88
gb|ABR23161.1| ATP-dependent Clp protease regulatory subunit Clp...   320   2e-85
ref|XP_001422509.1| chaperone, Hsp100 family, ClpC-type [Ostreoc...   319   4e-85
dbj|BAK06755.1| predicted protein [Hordeum vulgare subsp. vulgare]    316   5e-84
ref|XP_006404205.1| hypothetical protein EUTSA_v10010143mg [Eutr...   307   2e-81

>ref|XP_006402040.1| hypothetical protein EUTSA_v10012603mg [Eutrema salsugineum]
            gi|557103130|gb|ESQ43493.1| hypothetical protein
            EUTSA_v10012603mg [Eutrema salsugineum]
          Length = 929

 Score =  352 bits (904), Expect = 5e-95
 Identities = 183/256 (71%), Positives = 205/256 (80%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y DD+LVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEE
Sbjct: 447  GLRERYEIHHKLRYTDDSLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEE 506

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEKELR ITKEK+EAV+ QDFEKAG L +RE+EL+A++S I  KGKE  KAE+ETG+
Sbjct: 507  ARELEKELRQITKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGE 566

Query: 329  GGPVVTVADIQQIVASWTGIPVLK---------------------------VXXXXXXXR 231
             GP+VT +DIQ IV+SWTGIPV K                           V       R
Sbjct: 567  EGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEAVVAISRAIRR 626

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVSKL
Sbjct: 627  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 686

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGYTEGGQL
Sbjct: 687  IGSPPGYVGYTEGGQL 702


>ref|XP_006279971.1| hypothetical protein CARUB_v10025837mg [Capsella rubella]
            gi|482548675|gb|EOA12869.1| hypothetical protein
            CARUB_v10025837mg [Capsella rubella]
          Length = 929

 Score =  352 bits (904), Expect = 5e-95
 Identities = 183/256 (71%), Positives = 205/256 (80%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y DD+LVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEE
Sbjct: 447  GLRERYEIHHKLRYTDDSLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEE 506

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEKELR ITKEK+EAV+ QDFEKAG L +RE+EL+A++S I  KGKE  KAE+ETG+
Sbjct: 507  ARELEKELRQITKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGE 566

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
             GP+VT +DIQ IV+SWTGIPV KV                                  R
Sbjct: 567  EGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEAVKAISRAIRR 626

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVSKL
Sbjct: 627  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 686

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGYTEGGQL
Sbjct: 687  IGSPPGYVGYTEGGQL 702


>ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
            gi|297311666|gb|EFH42090.1| heat shock protein 93-V
            [Arabidopsis lyrata subsp. lyrata]
          Length = 929

 Score =  352 bits (904), Expect = 5e-95
 Identities = 183/256 (71%), Positives = 205/256 (80%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y DD+LVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEE
Sbjct: 447  GLRERYEIHHKLRYTDDSLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEE 506

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEKELR ITKEK+EAV+ QDFEKAG L +RE+EL+A++S I  KGKE  KAE+ETG+
Sbjct: 507  ARELEKELRQITKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGE 566

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
             GP+VT +DIQ IV+SWTGIPV KV                                  R
Sbjct: 567  EGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEAVKAISRAIRR 626

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVSKL
Sbjct: 627  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 686

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGYTEGGQL
Sbjct: 687  IGSPPGYVGYTEGGQL 702


>ref|XP_001779162.1| predicted protein [Physcomitrella patens] gi|162669421|gb|EDQ56008.1|
            predicted protein [Physcomitrella patens]
          Length = 922

 Score =  352 bits (902), Expect = 8e-95
 Identities = 180/256 (70%), Positives = 208/256 (81%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D+AL+AAA+LS QYISDRFLPDKAIDLIDEAGS+VRL+HAQLPEE
Sbjct: 455  GLRERYEIHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEE 514

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+L+K+LR +TKEK+EAV+ QDFEKAG+L ++E+ELKAQISV  EKGKE++KAE+ETGD
Sbjct: 515  ARELDKQLRAVTKEKNEAVRGQDFEKAGELRDKEMELKAQISVFIEKGKEQMKAESETGD 574

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
             GP V  +DIQQIVA+WTGIP+ KV                                  R
Sbjct: 575  VGPTVEESDIQQIVAAWTGIPMEKVSSDESDRLLKMEDTLHNRVIGQDEAVKAISRAIRR 634

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALA+YYFG+E++MVRLDMSE+MERHTVSKL
Sbjct: 635  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMVRLDMSEFMERHTVSKL 694

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGY+EGGQL
Sbjct: 695  IGSPPGYVGYSEGGQL 710


>ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
            thaliana] gi|75170759|sp|Q9FI56.1|CLPC1_ARATH RecName:
            Full=Chaperone protein ClpC1, chloroplastic; AltName:
            Full=ATP-dependent Clp protease ATP-binding subunit ClpC
            homolog 1; AltName: Full=Casein lytic proteinase C1;
            AltName: Full=Protein DE-REGULATED CAO ACCUMULATION 1;
            AltName: Full=Protein IRON-RESCUED MUTANT 1; Flags:
            Precursor gi|9758239|dbj|BAB08738.1| ATP-dependent Clp
            protease, ATP-binding subunit [Arabidopsis thaliana]
            gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis
            thaliana] gi|110742601|dbj|BAE99213.1| ATP-dependent Clp
            protease [Arabidopsis thaliana]
            gi|332008628|gb|AED96011.1| ATP-dependent Clp protease
            ATP-binding subunit ClpC [Arabidopsis thaliana]
          Length = 929

 Score =  351 bits (900), Expect = 1e-94
 Identities = 182/256 (71%), Positives = 205/256 (80%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D++LVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEE
Sbjct: 447  GLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEE 506

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEKELR ITKEK+EAV+ QDFEKAG L +RE+EL+A++S I  KGKE  KAE+ETG+
Sbjct: 507  ARELEKELRQITKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGE 566

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
             GP+VT +DIQ IV+SWTGIPV KV                                  R
Sbjct: 567  EGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEAVKAISRAIRR 626

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVSKL
Sbjct: 627  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 686

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGYTEGGQL
Sbjct: 687  IGSPPGYVGYTEGGQL 702


>ref|XP_001756645.1| predicted protein [Physcomitrella patens] gi|162692241|gb|EDQ78599.1|
            predicted protein [Physcomitrella patens]
          Length = 933

 Score =  350 bits (899), Expect = 2e-94
 Identities = 180/256 (70%), Positives = 207/256 (80%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D+ALVAAA+LS QYISDRFLPDKAIDLIDEAGS+VRL+HAQLPEE
Sbjct: 452  GLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEE 511

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+L+K+LR +TKEK+EAV+ QDFEKAG+L ++E+ELKAQIS   EKGKE++KAE+ETGD
Sbjct: 512  ARELDKQLRAVTKEKNEAVRGQDFEKAGELRDKEMELKAQISAFIEKGKEQMKAESETGD 571

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
             GP V  +DIQQIVA+WTGIP+ KV                                  R
Sbjct: 572  VGPTVEESDIQQIVAAWTGIPMEKVSSDESDRLLKMEDTLHTRVIGQDEAVKAISRAIRR 631

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALA+YYFG+E++MVRLDMSE+MERHTVSKL
Sbjct: 632  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMVRLDMSEFMERHTVSKL 691

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGY+EGGQL
Sbjct: 692  IGSPPGYVGYSEGGQL 707


>ref|XP_006404210.1| hypothetical protein EUTSA_v10010105mg [Eutrema salsugineum]
            gi|557105329|gb|ESQ45663.1| hypothetical protein
            EUTSA_v10010105mg [Eutrema salsugineum]
          Length = 929

 Score =  345 bits (885), Expect = 8e-93
 Identities = 179/256 (69%), Positives = 202/256 (78%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y DDALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEE
Sbjct: 444  GLRERYEIHHKLRYTDDALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEE 503

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEK+LR ITKEK+EAV+ QDFEKAG   +RE+EL+A+I+ +  KGKE  KAETE  +
Sbjct: 504  ARELEKQLRQITKEKNEAVRGQDFEKAGAHRDREIELRAEIAAVLAKGKEVSKAETEAEE 563

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
            GGP VT +DIQ IV++WTGIPV KV                                  R
Sbjct: 564  GGPTVTESDIQHIVSTWTGIPVEKVSSDESSRLLKMEQTLHTRVIGQDEAVKAISRAIRR 623

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVSKL
Sbjct: 624  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 683

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGY+EGGQL
Sbjct: 684  IGSPPGYVGYSEGGQL 699


>emb|CAB87915.1| AtClpC [Arabidopsis thaliana]
          Length = 952

 Score =  345 bits (884), Expect = 1e-92
 Identities = 180/256 (70%), Positives = 201/256 (78%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D+ALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE
Sbjct: 468  GLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 527

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEK+LR ITKEK+EAV+SQDFE AG   +RE+ELKA+I+ +  +GKE  KAE E  +
Sbjct: 528  ARELEKQLRQITKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEE 587

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
            GGP VT +DIQ IVA+WTGIPV KV                                  R
Sbjct: 588  GGPTVTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRR 647

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVSKL
Sbjct: 648  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 707

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGYTEGGQL
Sbjct: 708  IGSPPGYVGYTEGGQL 723


>ref|XP_006290259.1| hypothetical protein CARUB_v10016640mg [Capsella rubella]
            gi|482558966|gb|EOA23157.1| hypothetical protein
            CARUB_v10016640mg [Capsella rubella]
          Length = 977

 Score =  345 bits (884), Expect = 1e-92
 Identities = 179/256 (69%), Positives = 201/256 (78%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D+ALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEE
Sbjct: 493  GLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEE 552

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEK+LR ITKEK+EAV+ QDFEKAG   +RE+EL+A+I+ +  KGKE  KAE E  +
Sbjct: 553  ARELEKQLRQITKEKNEAVRGQDFEKAGSHRDREIELRAEIAAVLAKGKEVSKAENEAEE 612

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
            GGP VT +DIQ IVA+WTGIPV KV                                  R
Sbjct: 613  GGPTVTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRR 672

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVSKL
Sbjct: 673  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 732

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGYTEGGQL
Sbjct: 733  IGSPPGYVGYTEGGQL 748


>ref|NP_566912.2| Clp ATPase [Arabidopsis thaliana] gi|75213256|sp|Q9SXJ7.1|CLPC2_ARATH
            RecName: Full=Chaperone protein ClpC2, chloroplastic;
            AltName: Full=ATP-dependent Clp protease ATP-binding
            subunit ClpC homolog 2; AltName: Full=AtClpC; AltName:
            Full=Casein lytic proteinase C2; Flags: Precursor
            gi|5360574|dbj|BAA82062.1| AtClpC [Arabidopsis thaliana]
            gi|332644945|gb|AEE78466.1| Clp ATPase [Arabidopsis
            thaliana]
          Length = 952

 Score =  345 bits (884), Expect = 1e-92
 Identities = 180/256 (70%), Positives = 201/256 (78%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D+ALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE
Sbjct: 468  GLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 527

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEK+LR ITKEK+EAV+SQDFE AG   +RE+ELKA+I+ +  +GKE  KAE E  +
Sbjct: 528  ARELEKQLRQITKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEE 587

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
            GGP VT +DIQ IVA+WTGIPV KV                                  R
Sbjct: 588  GGPTVTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRR 647

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVSKL
Sbjct: 648  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 707

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGYTEGGQL
Sbjct: 708  IGSPPGYVGYTEGGQL 723


>ref|NP_001190035.1| Clp ATPase [Arabidopsis thaliana] gi|332644946|gb|AEE78467.1| Clp
            ATPase [Arabidopsis thaliana]
          Length = 921

 Score =  345 bits (884), Expect = 1e-92
 Identities = 180/256 (70%), Positives = 201/256 (78%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D+ALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE
Sbjct: 437  GLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 496

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEK+LR ITKEK+EAV+SQDFE AG   +RE+ELKA+I+ +  +GKE  KAE E  +
Sbjct: 497  ARELEKQLRQITKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEE 556

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
            GGP VT +DIQ IVA+WTGIPV KV                                  R
Sbjct: 557  GGPTVTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRR 616

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVSKL
Sbjct: 617  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 676

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGYTEGGQL
Sbjct: 677  IGSPPGYVGYTEGGQL 692


>gb|AAC04687.1| ClpC [Arabidopsis thaliana]
          Length = 928

 Score =  343 bits (880), Expect = 3e-92
 Identities = 179/256 (69%), Positives = 202/256 (78%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D++LVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEE
Sbjct: 446  GLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEE 505

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
             R+LEKELR ITKEK+EAV+ QDFEKAG L +RE+EL+A++S I  KGKE  KAE+ETG+
Sbjct: 506  VRELEKELRQITKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGE 565

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
             GP+VT +DIQ IV+SWTGIPV KV                                  R
Sbjct: 566  EGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEAVKAISRAIRR 625

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVS L
Sbjct: 626  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSTL 685

Query: 50   IGSPPGYVGYTEGGQL 3
            IGS PGYVGYTEGGQL
Sbjct: 686  IGSLPGYVGYTEGGQL 701


>ref|XP_006290258.1| hypothetical protein CARUB_v10016640mg [Capsella rubella]
            gi|482558965|gb|EOA23156.1| hypothetical protein
            CARUB_v10016640mg [Capsella rubella]
          Length = 750

 Score =  339 bits (869), Expect = 5e-91
 Identities = 176/253 (69%), Positives = 198/253 (78%), Gaps = 27/253 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D+ALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEE
Sbjct: 493  GLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEE 552

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEK+LR ITKEK+EAV+ QDFEKAG   +RE+EL+A+I+ +  KGKE  KAE E  +
Sbjct: 553  ARELEKQLRQITKEKNEAVRGQDFEKAGSHRDREIELRAEIAAVLAKGKEVSKAENEAEE 612

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
            GGP VT +DIQ IVA+WTGIPV KV                                  R
Sbjct: 613  GGPTVTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRR 672

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVSKL
Sbjct: 673  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 732

Query: 50   IGSPPGYVGYTEG 12
            IGSPPGYVGYTEG
Sbjct: 733  IGSPPGYVGYTEG 745


>ref|XP_002877635.1| AtClpC [Arabidopsis lyrata subsp. lyrata] gi|297323473|gb|EFH53894.1|
            AtClpC [Arabidopsis lyrata subsp. lyrata]
          Length = 953

 Score =  339 bits (869), Expect = 5e-91
 Identities = 177/256 (69%), Positives = 199/256 (77%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D+ALVAAA+LS QYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEE
Sbjct: 468  GLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEE 527

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEK+LR ITKEK+EAV+ QDFE AG   +RE+EL+A+I+ +   GKE  KAE E  +
Sbjct: 528  ARELEKQLRQITKEKNEAVRGQDFEMAGSHRDREIELRAEIANVLALGKEVAKAENEAEE 587

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
            GGP VT +DIQ IVA+WTGIPV KV                                  R
Sbjct: 588  GGPTVTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRR 647

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF+GPTGVGKSELAKALAAYYFG+E++M+RLDMSE+MERHTVSKL
Sbjct: 648  ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 707

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGYTEGGQL
Sbjct: 708  IGSPPGYVGYTEGGQL 723


>sp|P46523.1|CLPA_BRANA RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
            homolog, chloroplastic; Flags: Precursor
            gi|406311|emb|CAA53077.1| clpA [Brassica napus]
          Length = 874

 Score =  332 bits (851), Expect = 7e-89
 Identities = 177/256 (69%), Positives = 199/256 (77%), Gaps = 27/256 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D++LVAAA+LS QYISDRFLPD+AIDL+DEAGSRVRLRHAQ+PEE
Sbjct: 394  GLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFLPDRAIDLMDEAGSRVRLRHAQVPEE 453

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            AR+LEKELR ITKE +EAV+ QDFEKAG L +RE+EL+A++S I  KGKE  KAE+ETGD
Sbjct: 454  ARELEKELRQITKE-NEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGD 512

Query: 329  GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXXR 231
             GP+VT +DIQ IV+SWTGI V KV                                  R
Sbjct: 513  EGPMVTESDIQHIVSSWTGILVEKVSTDESDLLLKMEETLHKRVIGQDEAVKAISRAIRR 572

Query: 230  ARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSKL 51
            ARVGLKNPNRPIASFIF GPTGVGKSELAKALAAYYFG E++M+RLDMSE+MERHTVSKL
Sbjct: 573  ARVGLKNPNRPIASFIFFGPTGVGKSELAKALAAYYFGCEEAMIRLDMSEFMERHTVSKL 632

Query: 50   IGSPPGYVGYTEGGQL 3
            IGSPPGYVGYTE  QL
Sbjct: 633  IGSPPGYVGYTEPPQL 648


>ref|XP_002952540.1| hypothetical protein VOLCADRAFT_75431 [Volvox carteri f. nagariensis]
            gi|300262179|gb|EFJ46387.1| hypothetical protein
            VOLCADRAFT_75431 [Volvox carteri f. nagariensis]
          Length = 915

 Score =  330 bits (846), Expect = 3e-88
 Identities = 176/257 (68%), Positives = 195/257 (75%), Gaps = 28/257 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D++L+AAA+ SSQYISDRFLPDKAIDLIDEAGSRVRLRH QLPEE
Sbjct: 431  GLRERYETHHKLRYTDESLMAAAKYSSQYISDRFLPDKAIDLIDEAGSRVRLRHIQLPEE 490

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            ARDL+KELR +TK+KD AV++QDFEKAGQL +RE+ELKA+I  I    KE  KAE E+ +
Sbjct: 491  ARDLDKELRQVTKDKDAAVRAQDFEKAGQLRDREMELKAKIQAIIAGAKEASKAEAESVE 550

Query: 329  -GGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXX 234
             GGPVVT  DI  IVA WTGIP+ KV                                  
Sbjct: 551  GGGPVVTEQDIASIVAQWTGIPIEKVSSDETERLIKMEEVLHGRVIGQEEAVSAISRAIR 610

Query: 233  RARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSK 54
            RARVGLKNPNRPIASFIFAGPTGVGKSELAK LA YYFG+E++MVRLDMSE+MERHTVSK
Sbjct: 611  RARVGLKNPNRPIASFIFAGPTGVGKSELAKTLANYYFGSEEAMVRLDMSEFMERHTVSK 670

Query: 53   LIGSPPGYVGYTEGGQL 3
            LIGSPPGYVGY EGGQL
Sbjct: 671  LIGSPPGYVGYQEGGQL 687


>gb|ABR23161.1| ATP-dependent Clp protease regulatory subunit ClpC [Ulva fasciata]
          Length = 904

 Score =  320 bits (821), Expect = 2e-85
 Identities = 172/257 (66%), Positives = 189/257 (73%), Gaps = 28/257 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYEAHHKL Y DDAL+AAA+ S QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE
Sbjct: 423  GLRERYEAHHKLRYTDDALLAAAQYSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 482

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETE-TG 333
            AR++EKELR I KEKD  V++Q+FEKAG+L +REVELKA+I  I    K +  AE +  G
Sbjct: 483  AREVEKELRGIQKEKDSCVRAQEFEKAGELRDREVELKAKIDTIVSDKKAQDDAEADAAG 542

Query: 332  DGGPVVTVADIQQIVASWTGIPVLK---------------------------VXXXXXXX 234
              GP V   DI  IVA WTGIPV K                           V       
Sbjct: 543  GAGPTVQETDIANIVAQWTGIPVEKVSSDETERLVNMESVLHNRVIGQEEAVVAISRAIR 602

Query: 233  RARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSK 54
            RARVGLKNPNRPIASFIF+GPTGVGKSELAK LA YYFG+E++MVRLDMSEYMERHTV+K
Sbjct: 603  RARVGLKNPNRPIASFIFSGPTGVGKSELAKTLATYYFGSEEAMVRLDMSEYMERHTVAK 662

Query: 53   LIGSPPGYVGYTEGGQL 3
            LIGSPPGYVGY EGGQL
Sbjct: 663  LIGSPPGYVGYNEGGQL 679


>ref|XP_001422509.1| chaperone, Hsp100 family, ClpC-type [Ostreococcus lucimarinus
            CCE9901] gi|144582752|gb|ABP00826.1| chaperone, Hsp100
            family, ClpC-type [Ostreococcus lucimarinus CCE9901]
          Length = 840

 Score =  319 bits (818), Expect = 4e-85
 Identities = 168/257 (65%), Positives = 196/257 (76%), Gaps = 28/257 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y DDAL+AAA+ SSQYISDRFLPDKAIDLIDEAGSRVRL +A LPEE
Sbjct: 358  GLRERYELHHKLKYDDDALIAAAKFSSQYISDRFLPDKAIDLIDEAGSRVRLENAALPEE 417

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETGD 330
            A++L+KEL+ + KEKD A++SQDFE AG L +REVEL+AQI  ITE+ +E+ KA+ E+GD
Sbjct: 418  AKELDKELKALMKEKDTAIRSQDFEAAGGLRDREVELRAQIKQITERKQEENKAKAESGD 477

Query: 329  -GGPVVTVADIQQIVASWTGIPVLK---------------------------VXXXXXXX 234
              GP V   DI  IVA+WTGIPV K                           V       
Sbjct: 478  ASGPTVVEQDIADIVAAWTGIPVDKVSSDEGTRLMDMEETLHKRLVGQEEAVVACARAIR 537

Query: 233  RARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSK 54
            RAR GLKNPNRP+ASFIF+GPTGVGKSELAK+L+A+YFG+E++MVRLDMSE+MERHTVSK
Sbjct: 538  RARTGLKNPNRPVASFIFSGPTGVGKSELAKSLSAFYFGSEEAMVRLDMSEFMERHTVSK 597

Query: 53   LIGSPPGYVGYTEGGQL 3
            LIGSPPGYVGY+EGGQL
Sbjct: 598  LIGSPPGYVGYSEGGQL 614


>dbj|BAK06755.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 886

 Score =  316 bits (809), Expect = 5e-84
 Identities = 164/257 (63%), Positives = 197/257 (76%), Gaps = 28/257 (10%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 510
            GLRERYE HHKL Y D+AL+AAA+LS QYISDRFLPDKAIDL+DEAGS VRLRHA+LP+E
Sbjct: 408  GLRERYEIHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLVDEAGSLVRLRHAKLPDE 467

Query: 509  ARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEKGKEKLKAETETG- 333
            A+DL+K+L+ IT++K++A++SQ FE A +L + E+ELK QI  + +K KE  KAE E+G 
Sbjct: 468  AKDLDKKLKEITRQKNDAIRSQQFETAAELRSEELELKTQIMSLVDKSKEVSKAEVESGA 527

Query: 332  DGGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXXXXX 234
              GP+VT ADIQ+IVASWT +PV KV                                  
Sbjct: 528  STGPMVTEADIQRIVASWTSVPVEKVSVDESSRLLKMEETLHGRVIGQDEAVRAIGRAIR 587

Query: 233  RARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHTVSK 54
            RARVGL+NPNRP+ASFIFAGPTGVGKSELAKALAA Y+G+E++MVRLDMSE+MERHTV+K
Sbjct: 588  RARVGLRNPNRPVASFIFAGPTGVGKSELAKALAASYYGSEEAMVRLDMSEFMERHTVAK 647

Query: 53   LIGSPPGYVGYTEGGQL 3
            LIGSPPGYVGYTEGGQL
Sbjct: 648  LIGSPPGYVGYTEGGQL 664


>ref|XP_006404205.1| hypothetical protein EUTSA_v10010143mg [Eutrema salsugineum]
            gi|557105324|gb|ESQ45658.1| hypothetical protein
            EUTSA_v10010143mg [Eutrema salsugineum]
          Length = 744

 Score =  307 bits (786), Expect = 2e-81
 Identities = 169/260 (65%), Positives = 196/260 (75%), Gaps = 31/260 (11%)
 Frame = -2

Query: 689  GLRERYEAHHKLTYADDALVAAAELSSQYISDRFLPDKAIDLIDEAGSRV--RLRHAQLP 516
            GLRERYE HHKL Y D+ALVAAA+LS QYISDRFLPDKAIDLID+AGSRV  RLR A++P
Sbjct: 266  GLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDDAGSRVRLRLRQAKVP 325

Query: 515  EEARDLEKELRLITKEKDEAVQSQDFEKAGQLHNREVELKAQISVITEK-GKEKLKAETE 339
            EEAR+LEK+LR ITKEK+EAV++QDFEKAG   +RE+EL+A+IS +  K GKE  KAET+
Sbjct: 326  EEARELEKQLRQITKEKNEAVRAQDFEKAGSHRDREIELRAEISAVLAKGGKEVSKAETK 385

Query: 338  T-GDGGPVVTVADIQQIVASWTGIPVLKV---------------------------XXXX 243
               +  P VT +DIQ IV++WTGI V KV                               
Sbjct: 386  AEEERRPTVTESDIQHIVSTWTGIAVEKVTSDESSRLLKMEQTLHTRIIGQDEAVKAISR 445

Query: 242  XXXRARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGAEDSMVRLDMSEYMERHT 63
               RARVGLKNP RPIASFIF+GPTGVGKSELAKALAAY FG+E++M+RLDMSE+ME+HT
Sbjct: 446  AIRRARVGLKNPKRPIASFIFSGPTGVGKSELAKALAAYLFGSEEAMIRLDMSEFMEQHT 505

Query: 62   VSKLIGSPPGYVGYTEGGQL 3
            VSKLIGSPPGYVGY EGGQL
Sbjct: 506  VSKLIGSPPGYVGYEEGGQL 525