BLASTX nr result
ID: Ephedra28_contig00000707
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00000707
(453 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycin... 177 2e-42
ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Popu... 176 2e-42
ref|XP_002322450.1| DNA-directed RNA polymerase II family protei... 176 2e-42
gb|ADE76562.1| unknown [Picea sitchensis] 176 3e-42
gb|ABK24167.1| unknown [Picea sitchensis] 176 3e-42
gb|EMJ05946.1| hypothetical protein PRUPE_ppa013037mg [Prunus pe... 176 4e-42
ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, I... 176 4e-42
emb|CAN62586.1| hypothetical protein VITISV_000776 [Vitis vinifera] 176 4e-42
gb|ESW15363.1| hypothetical protein PHAVU_007G066800g [Phaseolus... 175 5e-42
ref|XP_004493541.1| PREDICTED: DNA-directed RNA polymerases I, I... 175 5e-42
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, ... 175 5e-42
ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu... 175 5e-42
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I... 175 5e-42
ref|XP_006857886.1| hypothetical protein AMTR_s00069p00112860 [A... 175 6e-42
ref|XP_004982505.1| PREDICTED: DNA-directed RNA polymerases I, I... 175 6e-42
gb|ACN40072.1| unknown [Picea sitchensis] 175 6e-42
gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subun... 174 8e-42
ref|XP_006421865.1| hypothetical protein CICLE_v10006171mg [Citr... 174 8e-42
ref|NP_001149930.1| LOC100283558 [Zea mays] gi|195635557|gb|ACG3... 174 8e-42
ref|NP_001148912.1| DNA-directed RNA polymerases I, II, and III ... 174 8e-42
>ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycine max]
gi|255626491|gb|ACU13590.1| unknown [Glycine max]
Length = 142
Score = 177 bits (448), Expect = 2e-42
Identities = 86/89 (96%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
K+ RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 54 KRPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 113
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 114 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 142
>ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Populus trichocarpa]
gi|550327061|gb|EEE96460.2| hypothetical protein
POPTR_0012s13610g [Populus trichocarpa]
Length = 183
Score = 176 bits (447), Expect = 2e-42
Identities = 86/89 (96%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
++ RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 95 ERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 154
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 155 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 183
>ref|XP_002322450.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa]
gi|222869446|gb|EEF06577.1| DNA-directed RNA polymerase
II family protein [Populus trichocarpa]
Length = 143
Score = 176 bits (447), Expect = 2e-42
Identities = 86/89 (96%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
++ RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 55 ERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 114
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 115 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 143
>gb|ADE76562.1| unknown [Picea sitchensis]
Length = 147
Score = 176 bits (446), Expect = 3e-42
Identities = 86/88 (97%), Positives = 87/88 (98%)
Frame = -3
Query: 274 KDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 95
K RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR
Sbjct: 60 KPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 119
Query: 94 YLPDGSYEDWGVDELIVEDSWKRQVGGD 11
YLPDGSYEDWGVDELIVEDSW+RQVGGD
Sbjct: 120 YLPDGSYEDWGVDELIVEDSWRRQVGGD 147
>gb|ABK24167.1| unknown [Picea sitchensis]
Length = 147
Score = 176 bits (446), Expect = 3e-42
Identities = 86/88 (97%), Positives = 87/88 (98%)
Frame = -3
Query: 274 KDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 95
K RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR
Sbjct: 60 KPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 119
Query: 94 YLPDGSYEDWGVDELIVEDSWKRQVGGD 11
YLPDGSYEDWGVDELIVEDSW+RQVGGD
Sbjct: 120 YLPDGSYEDWGVDELIVEDSWRRQVGGD 147
>gb|EMJ05946.1| hypothetical protein PRUPE_ppa013037mg [Prunus persica]
Length = 143
Score = 176 bits (445), Expect = 4e-42
Identities = 86/86 (100%), Positives = 86/86 (100%)
Frame = -3
Query: 268 RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 89
RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL
Sbjct: 58 RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 117
Query: 88 PDGSYEDWGVDELIVEDSWKRQVGGD 11
PDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 118 PDGSYEDWGVDELIVEDSWKRQVGGD 143
>ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2 [Vitis vinifera] gi|302143496|emb|CBI22057.3|
unnamed protein product [Vitis vinifera]
Length = 141
Score = 176 bits (445), Expect = 4e-42
Identities = 85/89 (95%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
++ RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 53 ERSRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 112
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 113 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 141
>emb|CAN62586.1| hypothetical protein VITISV_000776 [Vitis vinifera]
Length = 140
Score = 176 bits (445), Expect = 4e-42
Identities = 85/89 (95%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
++ RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 52 ERSRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 111
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 112 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 140
>gb|ESW15363.1| hypothetical protein PHAVU_007G066800g [Phaseolus vulgaris]
Length = 142
Score = 175 bits (444), Expect = 5e-42
Identities = 85/89 (95%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
++ RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 54 ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 113
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 114 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 142
>ref|XP_004493541.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Cicer arietinum]
Length = 145
Score = 175 bits (444), Expect = 5e-42
Identities = 85/89 (95%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
++ RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 57 ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 116
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 117 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 145
>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like [Glycine max]
Length = 142
Score = 175 bits (444), Expect = 5e-42
Identities = 85/89 (95%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
++ RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 54 ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 113
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 114 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 142
>ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus
communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA
polymerase subunit rpb6, putative [Ricinus communis]
Length = 124
Score = 175 bits (444), Expect = 5e-42
Identities = 85/89 (95%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
++ RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 36 ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 95
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 96 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 124
>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2 isoform 1 [Vitis vinifera]
gi|297741100|emb|CBI31831.3| unnamed protein product
[Vitis vinifera]
Length = 142
Score = 175 bits (444), Expect = 5e-42
Identities = 85/89 (95%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
++ RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Sbjct: 54 ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 113
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 114 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 142
>ref|XP_006857886.1| hypothetical protein AMTR_s00069p00112860 [Amborella trichopoda]
gi|548861988|gb|ERN19353.1| hypothetical protein
AMTR_s00069p00112860 [Amborella trichopoda]
Length = 144
Score = 175 bits (443), Expect = 6e-42
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = -3
Query: 274 KDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 95
+ RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR
Sbjct: 57 RPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 116
Query: 94 YLPDGSYEDWGVDELIVEDSWKRQVGGD 11
YLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 117 YLPDGSYEDWGVDELIVEDSWKRQVGGD 144
>ref|XP_004982505.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Setaria italica]
Length = 143
Score = 175 bits (443), Expect = 6e-42
Identities = 85/89 (95%), Positives = 87/89 (97%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
K +RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIR
Sbjct: 55 KSERKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIR 114
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 115 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 143
>gb|ACN40072.1| unknown [Picea sitchensis]
Length = 147
Score = 175 bits (443), Expect = 6e-42
Identities = 86/88 (97%), Positives = 86/88 (97%)
Frame = -3
Query: 274 KDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 95
K RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR
Sbjct: 60 KPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 119
Query: 94 YLPDGSYEDWGVDELIVEDSWKRQVGGD 11
YLPDGSYEDWGVDELIVEDSW RQVGGD
Sbjct: 120 YLPDGSYEDWGVDELIVEDSWTRQVGGD 147
>gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Morus
notabilis]
Length = 143
Score = 174 bits (442), Expect = 8e-42
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = -3
Query: 268 RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 89
RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL
Sbjct: 58 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 117
Query: 88 PDGSYEDWGVDELIVEDSWKRQVGGD 11
PDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 118 PDGSYEDWGVDELIVEDSWKRQVGGD 143
>ref|XP_006421865.1| hypothetical protein CICLE_v10006171mg [Citrus clementina]
gi|568874475|ref|XP_006490341.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 6A-like [Citrus
sinensis] gi|557523738|gb|ESR35105.1| hypothetical
protein CICLE_v10006171mg [Citrus clementina]
Length = 143
Score = 174 bits (442), Expect = 8e-42
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = -3
Query: 268 RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 89
RKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL
Sbjct: 58 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 117
Query: 88 PDGSYEDWGVDELIVEDSWKRQVGGD 11
PDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 118 PDGSYEDWGVDELIVEDSWKRQVGGD 143
>ref|NP_001149930.1| LOC100283558 [Zea mays] gi|195635557|gb|ACG37247.1| DNA-directed
RNA polymerases I, II, and III 14.4 kDa polypeptide [Zea
mays]
Length = 142
Score = 174 bits (442), Expect = 8e-42
Identities = 84/89 (94%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
K++RKT+K+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIR
Sbjct: 54 KRERKTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIR 113
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 114 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 142
>ref|NP_001148912.1| DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide
[Zea mays] gi|195623208|gb|ACG33434.1| DNA-directed RNA
polymerases I, II, and III 14.4 kDa polypeptide [Zea
mays]
Length = 142
Score = 174 bits (442), Expect = 8e-42
Identities = 84/89 (94%), Positives = 88/89 (98%)
Frame = -3
Query: 277 KKDRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 98
K++RKT+K+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIR
Sbjct: 54 KRERKTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIR 113
Query: 97 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 11
RYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 114 RYLPDGSYEDWGVDELIVEDSWKRQVGGD 142