BLASTX nr result

ID: Ephedra28_contig00000619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00000619
         (628 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838974.1| hypothetical protein AMTR_s00002p00271280 [A...   185   1e-44
ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261...   179   6e-43
emb|CBI23720.3| unnamed protein product [Vitis vinifera]              179   6e-43
ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   175   1e-41
ref|XP_004247794.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   173   3e-41
gb|EOY06191.1| RNA-binding family protein [Theobroma cacao]           173   4e-41
ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   172   5e-41
gb|ADE77701.1| unknown [Picea sitchensis]                             172   7e-41
emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. m...   171   1e-40
ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [S...   171   2e-40
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri...   171   2e-40
ref|XP_004497803.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   171   2e-40
ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus ...   169   8e-40
gb|EPS60926.1| hypothetical protein M569_13875, partial [Genlise...   168   1e-39
ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatul...   168   1e-39
gb|ACJ85270.1| unknown [Medicago truncatula]                          168   1e-39
ref|XP_004296531.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   168   1e-39
emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulga...   167   2e-39
gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]        167   3e-39
ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea ma...   167   3e-39

>ref|XP_006838974.1| hypothetical protein AMTR_s00002p00271280 [Amborella trichopoda]
           gi|548841480|gb|ERN01543.1| hypothetical protein
           AMTR_s00002p00271280 [Amborella trichopoda]
          Length = 288

 Score =  185 bits (469), Expect = 1e-44
 Identities = 91/167 (54%), Positives = 123/167 (73%), Gaps = 4/167 (2%)
 Frame = +1

Query: 139 IVKEGGVDGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRG 318
           I +E G  G+    E  ++LY GNLPY CDSA+LAGI+Q +GS E+VEVL+DRNTG SRG
Sbjct: 100 IEEESGGGGEISSDES-TKLYFGNLPYGCDSAQLAGIVQEYGSPELVEVLYDRNTGKSRG 158

Query: 319 FGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNL 486
           F F TM+S++DANAVI+NLDGS+YGGR L+VNF DKPK +E       Y++FVGNLSW++
Sbjct: 159 FAFVTMSSVEDANAVIQNLDGSEYGGRILKVNFRDKPKAKEPLYPETEYKLFVGNLSWSV 218

Query: 487 TSERMLRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           TSE + +IF      + ARV++D  T KS+GYGF+ +++  + E A+
Sbjct: 219 TSESLSQIFGEYGNVVGARVLYDGETGKSRGYGFVCYSTKSEMETAL 265



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
 Frame = +1

Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
           K KEPL      +L+VGNL ++  S  L+ I   +G+V    VL+D  TG SRG+GF   
Sbjct: 196 KAKEPLYPETEYKLFVGNLSWSVTSESLSQIFGEYGNVVGARVLYDGETGKSRGYGFVCY 255

Query: 337 TSIKDANAVIENLDGSQYGGRTLRVN 414
           ++  +    +++LDG    GR +RV+
Sbjct: 256 STKSEMETALQSLDGMDLEGRPIRVS 281


>ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
          Length = 751

 Score =  179 bits (454), Expect = 6e-43
 Identities = 84/150 (56%), Positives = 117/150 (78%), Gaps = 4/150 (2%)
 Frame = +1

Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
           ++LY GNLPY+CDSA+LAGIIQN+GS E+VEVL++R+TG SRGF F TM+S++D NAVIE
Sbjct: 111 TKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIE 170

Query: 370 NLDGSQYGGRTLRVNFPDKPKQR----ERNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
           NLDGS+YGGRTLRVNF DKPK +        Y++FVGNLSW++TSE + ++F      + 
Sbjct: 171 NLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIG 230

Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           ARV++D  T +S+GYGF+ +++  + + A+
Sbjct: 231 ARVLYDGETGRSRGYGFVCYSTKAEMDTAL 260



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 27/73 (36%), Positives = 45/73 (61%)
 Frame = +1

Query: 193 RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIEN 372
           +L+VGNL ++  S  L  + Q +G+V    VL+D  TG SRG+GF   ++  + +  +E+
Sbjct: 203 KLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALES 262

Query: 373 LDGSQYGGRTLRV 411
           L+G +  GR +RV
Sbjct: 263 LNGVELEGRAIRV 275


>emb|CBI23720.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  179 bits (454), Expect = 6e-43
 Identities = 84/150 (56%), Positives = 117/150 (78%), Gaps = 4/150 (2%)
 Frame = +1

Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
           ++LY GNLPY+CDSA+LAGIIQN+GS E+VEVL++R+TG SRGF F TM+S++D NAVIE
Sbjct: 111 TKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIE 170

Query: 370 NLDGSQYGGRTLRVNFPDKPKQR----ERNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
           NLDGS+YGGRTLRVNF DKPK +        Y++FVGNLSW++TSE + ++F      + 
Sbjct: 171 NLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIG 230

Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           ARV++D  T +S+GYGF+ +++  + + A+
Sbjct: 231 ARVLYDGETGRSRGYGFVCYSTKAEMDTAL 260



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 26/74 (35%), Positives = 46/74 (62%)
 Frame = +1

Query: 193 RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIEN 372
           +L+VGNL ++  S  L  + Q +G+V    VL+D  TG SRG+GF   ++  + +  +E+
Sbjct: 203 KLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALES 262

Query: 373 LDGSQYGGRTLRVN 414
           L+G +  GR +R++
Sbjct: 263 LNGVELEGRAIRIS 276


>ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like, partial
           [Solanum tuberosum]
          Length = 278

 Score =  175 bits (443), Expect = 1e-41
 Identities = 82/162 (50%), Positives = 119/162 (73%), Gaps = 4/162 (2%)
 Frame = +1

Query: 154 GVDGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFAT 333
           G DG ++ +   ++LY GNLPY CDSA+LAGI+Q++ S E+VEVL+DR+TG SRGF F T
Sbjct: 94  GFDGSSESEGVNTKLYFGNLPYLCDSAQLAGIVQDYASPELVEVLYDRDTGKSRGFAFVT 153

Query: 334 MTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERM 501
           M+S++D   V+ENLDG +YGGRTLRVNF DKPK +E       +++FVGNL+W+++SE +
Sbjct: 154 MSSLEDCKTVVENLDGREYGGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLAWSVSSESL 213

Query: 502 LRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
            + F      + ARV++D  T +S+GYGF+SF + ++ E A+
Sbjct: 214 AQAFQEYGAVVGARVLYDGETGRSRGYGFVSFETREEMENAL 255



 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
 Frame = +1

Query: 172 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
           K KEPL      +L+VGNL ++  S  LA   Q +G+V    VL+D  TG SRG+GF + 
Sbjct: 186 KPKEPLYPETEHKLFVGNLAWSVSSESLAQAFQEYGAVVGARVLYDGETGRSRGYGFVSF 245

Query: 337 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQ 435
            + ++    + NL+G +  GR LRV+  +  KQ
Sbjct: 246 ETREEMENALNNLNGVELDGRALRVSLAEGKKQ 278


>ref|XP_004247794.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Solanum
           lycopersicum]
          Length = 281

 Score =  173 bits (439), Expect = 3e-41
 Identities = 81/162 (50%), Positives = 119/162 (73%), Gaps = 4/162 (2%)
 Frame = +1

Query: 154 GVDGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFAT 333
           G DG ++ +   ++LY GNLPY CDSA+LAGI+Q++ S E+VEVL+DR+TG SRGF F T
Sbjct: 97  GSDGSSESEGVNTKLYFGNLPYLCDSAQLAGIVQDYASPELVEVLYDRDTGKSRGFAFVT 156

Query: 334 MTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERM 501
           M++++D   V+ENLDG +YGGRTLRVNF DKPK +E       +++FVGNL+W+++SE +
Sbjct: 157 MSTLEDCKTVVENLDGREYGGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLAWSVSSESL 216

Query: 502 LRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
            + F      + ARV++D  T +S+GYGF+SF + ++ E A+
Sbjct: 217 AQAFQEYGTVVGARVLYDGETGRSRGYGFVSFETREEMENAL 258



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
 Frame = +1

Query: 172 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
           K KEPL      +L+VGNL ++  S  LA   Q +G+V    VL+D  TG SRG+GF + 
Sbjct: 189 KPKEPLYPETEHKLFVGNLAWSVSSESLAQAFQEYGTVVGARVLYDGETGRSRGYGFVSF 248

Query: 337 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQ 435
            + ++    + NL+G +  GR LRV+     KQ
Sbjct: 249 ETREEMENALNNLNGVELDGRALRVSLAQGKKQ 281


>gb|EOY06191.1| RNA-binding family protein [Theobroma cacao]
          Length = 293

 Score =  173 bits (438), Expect = 4e-41
 Identities = 83/150 (55%), Positives = 113/150 (75%), Gaps = 4/150 (2%)
 Frame = +1

Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
           ++LY GNLPYN DSA+LAGIIQ +GS E+VEVL+DR TG SRGF F TM++++D N VIE
Sbjct: 121 TKLYFGNLPYNVDSAQLAGIIQEYGSPELVEVLYDRETGKSRGFAFVTMSTVEDCNTVIE 180

Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
           NLDGS+Y GRTLRVNF DKP+ RE       +++FVGNLSW++TSE + + F      + 
Sbjct: 181 NLDGSEYLGRTLRVNFSDKPRPREPLYPETEHKLFVGNLSWSVTSESLTQAFQEYGTVVG 240

Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           ARV++D  T +S+GYGF+S+++  + E A+
Sbjct: 241 ARVLYDGETGRSRGYGFVSYSTKSEMEAAL 270



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
 Frame = +1

Query: 172 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
           + +EPL      +L+VGNL ++  S  L    Q +G+V    VL+D  TG SRG+GF + 
Sbjct: 201 RPREPLYPETEHKLFVGNLSWSVTSESLTQAFQEYGTVVGARVLYDGETGRSRGYGFVSY 260

Query: 337 TSIKDANAVIENLDGSQYGGRTLRVN 414
           ++  +  A +++L+G +  GR +RV+
Sbjct: 261 STKSEMEAALQSLNGVELEGRAIRVS 286


>ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449487476|ref|XP_004157645.1| PREDICTED: 28
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 276

 Score =  172 bits (437), Expect = 5e-41
 Identities = 84/167 (50%), Positives = 119/167 (71%), Gaps = 4/167 (2%)
 Frame = +1

Query: 139 IVKEGGVDGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRG 318
           + +E  V+G +  +   ++LY GNLPY+ DS++LA I+Q++G  E++EVL+DRNTG SRG
Sbjct: 85  VEEETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRG 144

Query: 319 FGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNL 486
           F F TM+SI+D N VIENLDGS Y GR LRVNF DKPK +E       Y++FVGNLSW++
Sbjct: 145 FAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSV 204

Query: 487 TSERMLRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           TSE + + F      + ARV++D  T KS+GYGF+S+++  + E A+
Sbjct: 205 TSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETAL 251


>gb|ADE77701.1| unknown [Picea sitchensis]
          Length = 299

 Score =  172 bits (436), Expect = 7e-41
 Identities = 91/190 (47%), Positives = 127/190 (66%), Gaps = 28/190 (14%)
 Frame = +1

Query: 142 VKEGGVDGDNKD----KEPL------SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLF 291
           V E    G+ +D     EPL      +++Y+GNLP++CDSAELAGIIQ  GSVE+VEV++
Sbjct: 85  VSEEEKSGEEEDAPEISEPLHDIPAGTKVYLGNLPFSCDSAELAGIIQEHGSVEMVEVIY 144

Query: 292 DRNTGVSRGFGFATMTSIKDANAVIENLDGSQYGGRT------------LRVNFPDKPKQ 435
           D+NTG SRGF FATM+S++DANA++ENLDGSQYGGRT            LRVN  DK + 
Sbjct: 145 DQNTGRSRGFAFATMSSVEDANALVENLDGSQYGGRTLRVNLREEASRSLRVNLRDKSRS 204

Query: 436 RERN------LYEVFVGNLSWNLTSERMLRIFSTESKPLSARVVFDPHTKKSKGYGFLSF 597
            +RN       + V++GNLSW++  E +  +FS     L A++VFD  T +S+G+GF++F
Sbjct: 205 EQRNQTNNDGQHRVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITF 264

Query: 598 ASSDDAEEAV 627
           ++  +AE AV
Sbjct: 265 STQSEAEAAV 274



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 27/74 (36%), Positives = 47/74 (63%)
 Frame = +1

Query: 193 RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIEN 372
           R+Y+GNL ++ +   L  +    G++   +++FDR TG SRGFGF T ++  +A A + +
Sbjct: 217 RVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVAS 276

Query: 373 LDGSQYGGRTLRVN 414
           L+G +  GR +RV+
Sbjct: 277 LNGKELEGRAMRVD 290


>emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. minor]
          Length = 289

 Score =  171 bits (434), Expect = 1e-40
 Identities = 81/155 (52%), Positives = 113/155 (72%), Gaps = 4/155 (2%)
 Frame = +1

Query: 175 DKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDA 354
           +++  ++LY GNLPY+ DSA+LAG+I+ +GS E+VEVL+DR+TG SRGF FATMT ++D 
Sbjct: 112 EEDTRTKLYFGNLPYSVDSAKLAGLIEEYGSAELVEVLYDRDTGKSRGFAFATMTCVEDC 171

Query: 355 NAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTE 522
            AVIENLDG ++ GRTLRVNF DKPK +E       Y++F+GNLSW +TSE +   F   
Sbjct: 172 KAVIENLDGKEFMGRTLRVNFSDKPKAKESLYPETEYKLFIGNLSWKVTSEILTEAFQEH 231

Query: 523 SKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
              + ARV++D  T  S+GYGF+S+A+  + E A+
Sbjct: 232 GTVVGARVIYDGETGNSRGYGFVSYANKSEMEAAL 266


>ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
           gi|241932860|gb|EES06005.1| hypothetical protein
           SORBIDRAFT_04g037020 [Sorghum bicolor]
          Length = 295

 Score =  171 bits (433), Expect = 2e-40
 Identities = 82/171 (47%), Positives = 118/171 (69%), Gaps = 12/171 (7%)
 Frame = +1

Query: 151 GGVDGDNKDKEP--------LSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTG 306
           G V+G ++D  P         ++LY GNLPYNCDSA+LAGI+Q + S E+VEVL+DR TG
Sbjct: 103 GAVEGSSQDSRPSVAASTTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITG 162

Query: 307 VSRGFGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQR----ERNLYEVFVGNL 474
            SRGF F TMT+++D   VI+NLDGS YGGRT++VNF D+PK +        +++FVGNL
Sbjct: 163 RSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNFADRPKPKLPLYPETEHKLFVGNL 222

Query: 475 SWNLTSERMLRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           SW +TSE +   F      + ARV++D  T +S+GYGF+ +++ ++ +EA+
Sbjct: 223 SWTVTSEMLTEAFGRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEAI 273


>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532218|gb|EEF34022.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 285

 Score =  171 bits (433), Expect = 2e-40
 Identities = 82/150 (54%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
 Frame = +1

Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
           ++LY GNLPYN DSA+LAGIIQ++G+ E+VEVL+DR+TG SRGF F TM++++D NAVIE
Sbjct: 113 TKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIE 172

Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
           NLDGSQ+ GR LRVNF DKPK +E       +++FVGNLSW++TSE ++  F      + 
Sbjct: 173 NLDGSQFMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVG 232

Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           ARV++D  T +S+GYGF+ +A+  + E A+
Sbjct: 233 ARVLYDGETGRSRGYGFVCYATRSEMENAL 262



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
 Frame = +1

Query: 172 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
           K KEPL      +L+VGNL ++  S  L    Q +G++    VL+D  TG SRG+GF   
Sbjct: 193 KPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVGARVLYDGETGRSRGYGFVCY 252

Query: 337 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPK 432
            +  +    + +L+G +  GR +RV+     K
Sbjct: 253 ATRSEMENALVSLNGVELEGRAMRVSLAQGKK 284


>ref|XP_004497803.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer
           arietinum]
          Length = 371

 Score =  171 bits (432), Expect = 2e-40
 Identities = 81/155 (52%), Positives = 115/155 (74%), Gaps = 4/155 (2%)
 Frame = +1

Query: 175 DKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDA 354
           +++  ++LY GNLPY+ DSA+LAG+I+++GS E++EVL+DR+TG SRGF F TM+ I+D 
Sbjct: 195 EEDTRTKLYFGNLPYSVDSAQLAGLIEDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDC 254

Query: 355 NAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTE 522
            AVIENLDG+++ GRTLRVNF DKPK +E       Y++FVGNLSW +TSE + + F   
Sbjct: 255 KAVIENLDGNEFLGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWTVTSESLTQAFQEY 314

Query: 523 SKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
              + ARV++D  T KS+GYGF+S+ S  + E A+
Sbjct: 315 GTVVGARVLYDGETGKSRGYGFVSYGSKSEMEAAL 349



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
 Frame = +1

Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
           K KEPL      +L+VGNL +   S  L    Q +G+V    VL+D  TG SRG+GF + 
Sbjct: 280 KPKEPLYPETEYKLFVGNLSWTVTSESLTQAFQEYGTVVGARVLYDGETGKSRGYGFVSY 339

Query: 337 TSIKDANAVIENLDGSQYGGRTLRVN 414
            S  +  A +  ++  +  GR LRV+
Sbjct: 340 GSKSEMEAALSYMNNVELEGRALRVS 365


>ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
           gi|118486835|gb|ABK95252.1| unknown [Populus
           trichocarpa] gi|222851516|gb|EEE89063.1| RNA-binding
           protein RNP1 precursor [Populus trichocarpa]
          Length = 279

 Score =  169 bits (427), Expect = 8e-40
 Identities = 83/163 (50%), Positives = 114/163 (69%), Gaps = 4/163 (2%)
 Frame = +1

Query: 151 GGVDGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFA 330
           G  +G+       ++LY GNLPYN DSA+LAG+IQ +G+ E+VEVL+ R TG SRGF F 
Sbjct: 94  GETEGEADQVPVNTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFV 153

Query: 331 TMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSER 498
           TM+SI+D   VIENLDGSQY GR LRVNF DKPK +E       Y++F+GNLSW++TSE 
Sbjct: 154 TMSSIEDCETVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSES 213

Query: 499 MLRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           + + F      + ARV++D  T KS+GYGF+ +++ ++ E A+
Sbjct: 214 LTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETAL 256



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
 Frame = +1

Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
           K KEPL      +L++GNL ++  S  L    Q +G+V    VL+D  TG SRG+GF   
Sbjct: 187 KPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCY 246

Query: 337 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPK 432
           ++ ++    +++L+G +  GR LRV+  +  K
Sbjct: 247 STKEELETALQSLNGVELEGRALRVSLAEGRK 278


>gb|EPS60926.1| hypothetical protein M569_13875, partial [Genlisea aurea]
          Length = 184

 Score =  168 bits (426), Expect = 1e-39
 Identities = 79/150 (52%), Positives = 112/150 (74%), Gaps = 4/150 (2%)
 Frame = +1

Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
           ++LY GNLPYNCDSA+LAGIIQ++ S E++EVL+DRNTG SRGF F TM+S+++ N VI+
Sbjct: 12  TKLYFGNLPYNCDSAQLAGIIQDYASPELIEVLYDRNTGRSRGFAFVTMSSVEECNTVIQ 71

Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
           NLDGS++GGR +RVNF ++PK +E       Y++FVGNLSW++TSE +   F      + 
Sbjct: 72  NLDGSEFGGRIMRVNFSNQPKPKEPLYPETDYKLFVGNLSWSVTSESLREAFQQYGTVVG 131

Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           ARV++D  T +S+GYGF+S+ +    E A+
Sbjct: 132 ARVLYDGETGRSRGYGFVSYDTKTAMEAAL 161



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
 Frame = +1

Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
           K KEPL      +L+VGNL ++  S  L    Q +G+V    VL+D  TG SRG+GF + 
Sbjct: 92  KPKEPLYPETDYKLFVGNLSWSVTSESLREAFQQYGTVVGARVLYDGETGRSRGYGFVSY 151

Query: 337 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQ 435
            +     A ++ LDG++  GR +R++     KQ
Sbjct: 152 DTKTAMEAALKTLDGAELEGRAIRISLAQGKKQ 184


>ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatula]
           gi|355479222|gb|AES60425.1| 31 kDa ribonucleoprotein
           [Medicago truncatula]
          Length = 387

 Score =  168 bits (426), Expect = 1e-39
 Identities = 79/150 (52%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
 Frame = +1

Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
           ++LY GNLPY+ DSA LAG+I+ +GS E++EVL+DR+TG SRGF F TM+ ++D NAVI+
Sbjct: 215 TKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQ 274

Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
           NLDG ++ GRTLRVNF DKPK +E       Y++FVGNL+W +TSE + + F      + 
Sbjct: 275 NLDGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVG 334

Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           ARV+FD  T KS+GYGF+S+A+  + + A+
Sbjct: 335 ARVLFDGETGKSRGYGFVSYATKSEMDTAL 364



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
 Frame = +1

Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
           K KEPL      +L+VGNL +   S  L    Q  G+V    VLFD  TG SRG+GF + 
Sbjct: 295 KPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSY 354

Query: 337 TSIKDANAVIENLDGSQYGGRTLRVN 414
            +  + +  +  +D  +  GRTLRV+
Sbjct: 355 ATKSEMDTALAIMDNVELEGRTLRVS 380


>gb|ACJ85270.1| unknown [Medicago truncatula]
          Length = 285

 Score =  168 bits (426), Expect = 1e-39
 Identities = 79/150 (52%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
 Frame = +1

Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
           ++LY GNLPY+ DSA LAG+I+ +GS E++EVL+DR+TG SRGF F TM+ ++D NAVI+
Sbjct: 113 TKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQ 172

Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
           NLDG ++ GRTLRVNF DKPK +E       Y++FVGNL+W +TSE + + F      + 
Sbjct: 173 NLDGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVG 232

Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           ARV+FD  T KS+GYGF+S+A+  + + A+
Sbjct: 233 ARVLFDGETGKSRGYGFVSYATKSEMDTAL 262



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
 Frame = +1

Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
           K KEPL      +L+VGNL +   S  L    Q  G+V    VLFD  TG SRG+GF + 
Sbjct: 193 KPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSY 252

Query: 337 TSIKDANAVIENLDGSQYGGRTLRVN 414
            +  + +  +  +D  +  GRTLRV+
Sbjct: 253 ATKSEMDTALAIMDNVELEGRTLRVS 278


>ref|XP_004296531.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 297

 Score =  168 bits (425), Expect = 1e-39
 Identities = 80/150 (53%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
 Frame = +1

Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
           ++LY GNLPY+ DSA+LAGIIQ++ S E++EVL+ R+TG SRGF F TM+S++D NAVIE
Sbjct: 125 TKLYFGNLPYSVDSAQLAGIIQDYASPELIEVLYHRDTGKSRGFAFVTMSSVEDCNAVIE 184

Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
           NLDG +Y GRTLRVNF DKP+ +E       Y++FVGNLSW+ TSE + + F      + 
Sbjct: 185 NLDGREYSGRTLRVNFSDKPRAKEPLYPETEYKLFVGNLSWSATSESLTKAFQEYGNVVG 244

Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           ARV++D  T +S+GYGF+ F++  + E A+
Sbjct: 245 ARVLYDGETGRSRGYGFVCFSTKAEMETAL 274



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
 Frame = +1

Query: 178 KEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTS 342
           KEPL      +L+VGNL ++  S  L    Q +G+V    VL+D  TG SRG+GF   ++
Sbjct: 207 KEPLYPETEYKLFVGNLSWSATSESLTKAFQEYGNVVGARVLYDGETGRSRGYGFVCFST 266

Query: 343 IKDANAVIENLDGSQYGGRTLRVNFPD 423
             +    +++LDG +  GR +RV+  +
Sbjct: 267 KAEMETALQSLDGVELEGRAMRVSLAE 293


>emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
           gi|561018539|gb|ESW17343.1| hypothetical protein
           PHAVU_007G231600g [Phaseolus vulgaris]
          Length = 287

 Score =  167 bits (424), Expect = 2e-39
 Identities = 80/158 (50%), Positives = 117/158 (74%), Gaps = 4/158 (2%)
 Frame = +1

Query: 166 DNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSI 345
           D+ +    ++LY GNLPY+ DSA+LAG+IQ++GS E++EVL+DR+TG SRGF F TM+ I
Sbjct: 105 DSDESFASTKLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCI 164

Query: 346 KDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIF 513
           +D NAVIENLDG +Y GRTLRVNF +KPK +E       +++FVGNLSW++T+E + + F
Sbjct: 165 EDCNAVIENLDGKEYLGRTLRVNFSNKPKAKEPLYPETEHKLFVGNLSWSVTNEILTQAF 224

Query: 514 STESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
                 + ARV++D  T +S+GYGF+ F++ ++ E A+
Sbjct: 225 QEYGTVVGARVLYDGETGRSRGYGFVCFSTKEEMEAAL 262


>gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
          Length = 287

 Score =  167 bits (422), Expect = 3e-39
 Identities = 77/150 (51%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
 Frame = +1

Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
           ++LY GNLPYNCDSA+LAGI+Q + S E+VEVL+DR TG SRGF F TMT+++D   VI+
Sbjct: 116 TKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIK 175

Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
           NLDGS YGGRT++VNF D+PK ++       +++FVGNLSW +TSE +   F      + 
Sbjct: 176 NLDGSLYGGRTMKVNFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVG 235

Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           ARV++D  T +S+GYGF+ +++ ++ +EA+
Sbjct: 236 ARVLYDGETGRSRGYGFVCYSTREEMDEAL 265


>ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
           gi|194698058|gb|ACF83113.1| unknown [Zea mays]
          Length = 287

 Score =  167 bits (422), Expect = 3e-39
 Identities = 77/150 (51%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
 Frame = +1

Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
           ++LY GNLPYNCDSA+LAGI+Q + S E+VEVL+DR TG SRGF F TMT+++D   VI+
Sbjct: 116 TKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIK 175

Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
           NLDGS YGGRT++VNF D+PK ++       +++FVGNLSW +TSE +   F      + 
Sbjct: 176 NLDGSLYGGRTMKVNFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVG 235

Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
           ARV++D  T +S+GYGF+ +++ ++ +EA+
Sbjct: 236 ARVLYDGETGRSRGYGFVCYSTREEMDEAL 265


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