BLASTX nr result
ID: Ephedra28_contig00000619
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00000619
(628 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006838974.1| hypothetical protein AMTR_s00002p00271280 [A... 185 1e-44
ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261... 179 6e-43
emb|CBI23720.3| unnamed protein product [Vitis vinifera] 179 6e-43
ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 175 1e-41
ref|XP_004247794.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 173 3e-41
gb|EOY06191.1| RNA-binding family protein [Theobroma cacao] 173 4e-41
ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 172 5e-41
gb|ADE77701.1| unknown [Picea sitchensis] 172 7e-41
emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. m... 171 1e-40
ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [S... 171 2e-40
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri... 171 2e-40
ref|XP_004497803.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 171 2e-40
ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus ... 169 8e-40
gb|EPS60926.1| hypothetical protein M569_13875, partial [Genlise... 168 1e-39
ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatul... 168 1e-39
gb|ACJ85270.1| unknown [Medicago truncatula] 168 1e-39
ref|XP_004296531.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 168 1e-39
emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulga... 167 2e-39
gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays] 167 3e-39
ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea ma... 167 3e-39
>ref|XP_006838974.1| hypothetical protein AMTR_s00002p00271280 [Amborella trichopoda]
gi|548841480|gb|ERN01543.1| hypothetical protein
AMTR_s00002p00271280 [Amborella trichopoda]
Length = 288
Score = 185 bits (469), Expect = 1e-44
Identities = 91/167 (54%), Positives = 123/167 (73%), Gaps = 4/167 (2%)
Frame = +1
Query: 139 IVKEGGVDGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRG 318
I +E G G+ E ++LY GNLPY CDSA+LAGI+Q +GS E+VEVL+DRNTG SRG
Sbjct: 100 IEEESGGGGEISSDES-TKLYFGNLPYGCDSAQLAGIVQEYGSPELVEVLYDRNTGKSRG 158
Query: 319 FGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNL 486
F F TM+S++DANAVI+NLDGS+YGGR L+VNF DKPK +E Y++FVGNLSW++
Sbjct: 159 FAFVTMSSVEDANAVIQNLDGSEYGGRILKVNFRDKPKAKEPLYPETEYKLFVGNLSWSV 218
Query: 487 TSERMLRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
TSE + +IF + ARV++D T KS+GYGF+ +++ + E A+
Sbjct: 219 TSESLSQIFGEYGNVVGARVLYDGETGKSRGYGFVCYSTKSEMETAL 265
Score = 59.3 bits (142), Expect = 9e-07
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +1
Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
K KEPL +L+VGNL ++ S L+ I +G+V VL+D TG SRG+GF
Sbjct: 196 KAKEPLYPETEYKLFVGNLSWSVTSESLSQIFGEYGNVVGARVLYDGETGKSRGYGFVCY 255
Query: 337 TSIKDANAVIENLDGSQYGGRTLRVN 414
++ + +++LDG GR +RV+
Sbjct: 256 STKSEMETALQSLDGMDLEGRPIRVS 281
>ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 179 bits (454), Expect = 6e-43
Identities = 84/150 (56%), Positives = 117/150 (78%), Gaps = 4/150 (2%)
Frame = +1
Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
++LY GNLPY+CDSA+LAGIIQN+GS E+VEVL++R+TG SRGF F TM+S++D NAVIE
Sbjct: 111 TKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIE 170
Query: 370 NLDGSQYGGRTLRVNFPDKPKQR----ERNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
NLDGS+YGGRTLRVNF DKPK + Y++FVGNLSW++TSE + ++F +
Sbjct: 171 NLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIG 230
Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
ARV++D T +S+GYGF+ +++ + + A+
Sbjct: 231 ARVLYDGETGRSRGYGFVCYSTKAEMDTAL 260
Score = 57.0 bits (136), Expect = 4e-06
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = +1
Query: 193 RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIEN 372
+L+VGNL ++ S L + Q +G+V VL+D TG SRG+GF ++ + + +E+
Sbjct: 203 KLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALES 262
Query: 373 LDGSQYGGRTLRV 411
L+G + GR +RV
Sbjct: 263 LNGVELEGRAIRV 275
>emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 179 bits (454), Expect = 6e-43
Identities = 84/150 (56%), Positives = 117/150 (78%), Gaps = 4/150 (2%)
Frame = +1
Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
++LY GNLPY+CDSA+LAGIIQN+GS E+VEVL++R+TG SRGF F TM+S++D NAVIE
Sbjct: 111 TKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIE 170
Query: 370 NLDGSQYGGRTLRVNFPDKPKQR----ERNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
NLDGS+YGGRTLRVNF DKPK + Y++FVGNLSW++TSE + ++F +
Sbjct: 171 NLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIG 230
Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
ARV++D T +S+GYGF+ +++ + + A+
Sbjct: 231 ARVLYDGETGRSRGYGFVCYSTKAEMDTAL 260
Score = 57.0 bits (136), Expect = 4e-06
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = +1
Query: 193 RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIEN 372
+L+VGNL ++ S L + Q +G+V VL+D TG SRG+GF ++ + + +E+
Sbjct: 203 KLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALES 262
Query: 373 LDGSQYGGRTLRVN 414
L+G + GR +R++
Sbjct: 263 LNGVELEGRAIRIS 276
>ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like, partial
[Solanum tuberosum]
Length = 278
Score = 175 bits (443), Expect = 1e-41
Identities = 82/162 (50%), Positives = 119/162 (73%), Gaps = 4/162 (2%)
Frame = +1
Query: 154 GVDGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFAT 333
G DG ++ + ++LY GNLPY CDSA+LAGI+Q++ S E+VEVL+DR+TG SRGF F T
Sbjct: 94 GFDGSSESEGVNTKLYFGNLPYLCDSAQLAGIVQDYASPELVEVLYDRDTGKSRGFAFVT 153
Query: 334 MTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERM 501
M+S++D V+ENLDG +YGGRTLRVNF DKPK +E +++FVGNL+W+++SE +
Sbjct: 154 MSSLEDCKTVVENLDGREYGGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLAWSVSSESL 213
Query: 502 LRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
+ F + ARV++D T +S+GYGF+SF + ++ E A+
Sbjct: 214 AQAFQEYGAVVGARVLYDGETGRSRGYGFVSFETREEMENAL 255
Score = 66.2 bits (160), Expect = 7e-09
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Frame = +1
Query: 172 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
K KEPL +L+VGNL ++ S LA Q +G+V VL+D TG SRG+GF +
Sbjct: 186 KPKEPLYPETEHKLFVGNLAWSVSSESLAQAFQEYGAVVGARVLYDGETGRSRGYGFVSF 245
Query: 337 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQ 435
+ ++ + NL+G + GR LRV+ + KQ
Sbjct: 246 ETREEMENALNNLNGVELDGRALRVSLAEGKKQ 278
>ref|XP_004247794.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 281
Score = 173 bits (439), Expect = 3e-41
Identities = 81/162 (50%), Positives = 119/162 (73%), Gaps = 4/162 (2%)
Frame = +1
Query: 154 GVDGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFAT 333
G DG ++ + ++LY GNLPY CDSA+LAGI+Q++ S E+VEVL+DR+TG SRGF F T
Sbjct: 97 GSDGSSESEGVNTKLYFGNLPYLCDSAQLAGIVQDYASPELVEVLYDRDTGKSRGFAFVT 156
Query: 334 MTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERM 501
M++++D V+ENLDG +YGGRTLRVNF DKPK +E +++FVGNL+W+++SE +
Sbjct: 157 MSTLEDCKTVVENLDGREYGGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLAWSVSSESL 216
Query: 502 LRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
+ F + ARV++D T +S+GYGF+SF + ++ E A+
Sbjct: 217 AQAFQEYGTVVGARVLYDGETGRSRGYGFVSFETREEMENAL 258
Score = 65.5 bits (158), Expect = 1e-08
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Frame = +1
Query: 172 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
K KEPL +L+VGNL ++ S LA Q +G+V VL+D TG SRG+GF +
Sbjct: 189 KPKEPLYPETEHKLFVGNLAWSVSSESLAQAFQEYGTVVGARVLYDGETGRSRGYGFVSF 248
Query: 337 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQ 435
+ ++ + NL+G + GR LRV+ KQ
Sbjct: 249 ETREEMENALNNLNGVELDGRALRVSLAQGKKQ 281
>gb|EOY06191.1| RNA-binding family protein [Theobroma cacao]
Length = 293
Score = 173 bits (438), Expect = 4e-41
Identities = 83/150 (55%), Positives = 113/150 (75%), Gaps = 4/150 (2%)
Frame = +1
Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
++LY GNLPYN DSA+LAGIIQ +GS E+VEVL+DR TG SRGF F TM++++D N VIE
Sbjct: 121 TKLYFGNLPYNVDSAQLAGIIQEYGSPELVEVLYDRETGKSRGFAFVTMSTVEDCNTVIE 180
Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
NLDGS+Y GRTLRVNF DKP+ RE +++FVGNLSW++TSE + + F +
Sbjct: 181 NLDGSEYLGRTLRVNFSDKPRPREPLYPETEHKLFVGNLSWSVTSESLTQAFQEYGTVVG 240
Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
ARV++D T +S+GYGF+S+++ + E A+
Sbjct: 241 ARVLYDGETGRSRGYGFVSYSTKSEMEAAL 270
Score = 58.9 bits (141), Expect = 1e-06
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = +1
Query: 172 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
+ +EPL +L+VGNL ++ S L Q +G+V VL+D TG SRG+GF +
Sbjct: 201 RPREPLYPETEHKLFVGNLSWSVTSESLTQAFQEYGTVVGARVLYDGETGRSRGYGFVSY 260
Query: 337 TSIKDANAVIENLDGSQYGGRTLRVN 414
++ + A +++L+G + GR +RV+
Sbjct: 261 STKSEMEAALQSLNGVELEGRAIRVS 286
>ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449487476|ref|XP_004157645.1| PREDICTED: 28
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 172 bits (437), Expect = 5e-41
Identities = 84/167 (50%), Positives = 119/167 (71%), Gaps = 4/167 (2%)
Frame = +1
Query: 139 IVKEGGVDGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRG 318
+ +E V+G + + ++LY GNLPY+ DS++LA I+Q++G E++EVL+DRNTG SRG
Sbjct: 85 VEEETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRG 144
Query: 319 FGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNL 486
F F TM+SI+D N VIENLDGS Y GR LRVNF DKPK +E Y++FVGNLSW++
Sbjct: 145 FAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSV 204
Query: 487 TSERMLRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
TSE + + F + ARV++D T KS+GYGF+S+++ + E A+
Sbjct: 205 TSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETAL 251
>gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 172 bits (436), Expect = 7e-41
Identities = 91/190 (47%), Positives = 127/190 (66%), Gaps = 28/190 (14%)
Frame = +1
Query: 142 VKEGGVDGDNKD----KEPL------SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLF 291
V E G+ +D EPL +++Y+GNLP++CDSAELAGIIQ GSVE+VEV++
Sbjct: 85 VSEEEKSGEEEDAPEISEPLHDIPAGTKVYLGNLPFSCDSAELAGIIQEHGSVEMVEVIY 144
Query: 292 DRNTGVSRGFGFATMTSIKDANAVIENLDGSQYGGRT------------LRVNFPDKPKQ 435
D+NTG SRGF FATM+S++DANA++ENLDGSQYGGRT LRVN DK +
Sbjct: 145 DQNTGRSRGFAFATMSSVEDANALVENLDGSQYGGRTLRVNLREEASRSLRVNLRDKSRS 204
Query: 436 RERN------LYEVFVGNLSWNLTSERMLRIFSTESKPLSARVVFDPHTKKSKGYGFLSF 597
+RN + V++GNLSW++ E + +FS L A++VFD T +S+G+GF++F
Sbjct: 205 EQRNQTNNDGQHRVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITF 264
Query: 598 ASSDDAEEAV 627
++ +AE AV
Sbjct: 265 STQSEAEAAV 274
Score = 60.8 bits (146), Expect = 3e-07
Identities = 27/74 (36%), Positives = 47/74 (63%)
Frame = +1
Query: 193 RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIEN 372
R+Y+GNL ++ + L + G++ +++FDR TG SRGFGF T ++ +A A + +
Sbjct: 217 RVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVAS 276
Query: 373 LDGSQYGGRTLRVN 414
L+G + GR +RV+
Sbjct: 277 LNGKELEGRAMRVD 290
>emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. minor]
Length = 289
Score = 171 bits (434), Expect = 1e-40
Identities = 81/155 (52%), Positives = 113/155 (72%), Gaps = 4/155 (2%)
Frame = +1
Query: 175 DKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDA 354
+++ ++LY GNLPY+ DSA+LAG+I+ +GS E+VEVL+DR+TG SRGF FATMT ++D
Sbjct: 112 EEDTRTKLYFGNLPYSVDSAKLAGLIEEYGSAELVEVLYDRDTGKSRGFAFATMTCVEDC 171
Query: 355 NAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTE 522
AVIENLDG ++ GRTLRVNF DKPK +E Y++F+GNLSW +TSE + F
Sbjct: 172 KAVIENLDGKEFMGRTLRVNFSDKPKAKESLYPETEYKLFIGNLSWKVTSEILTEAFQEH 231
Query: 523 SKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
+ ARV++D T S+GYGF+S+A+ + E A+
Sbjct: 232 GTVVGARVIYDGETGNSRGYGFVSYANKSEMEAAL 266
>ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein
SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 171 bits (433), Expect = 2e-40
Identities = 82/171 (47%), Positives = 118/171 (69%), Gaps = 12/171 (7%)
Frame = +1
Query: 151 GGVDGDNKDKEP--------LSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTG 306
G V+G ++D P ++LY GNLPYNCDSA+LAGI+Q + S E+VEVL+DR TG
Sbjct: 103 GAVEGSSQDSRPSVAASTTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITG 162
Query: 307 VSRGFGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQR----ERNLYEVFVGNL 474
SRGF F TMT+++D VI+NLDGS YGGRT++VNF D+PK + +++FVGNL
Sbjct: 163 RSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNFADRPKPKLPLYPETEHKLFVGNL 222
Query: 475 SWNLTSERMLRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
SW +TSE + F + ARV++D T +S+GYGF+ +++ ++ +EA+
Sbjct: 223 SWTVTSEMLTEAFGRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEAI 273
>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 285
Score = 171 bits (433), Expect = 2e-40
Identities = 82/150 (54%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
Frame = +1
Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
++LY GNLPYN DSA+LAGIIQ++G+ E+VEVL+DR+TG SRGF F TM++++D NAVIE
Sbjct: 113 TKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIE 172
Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
NLDGSQ+ GR LRVNF DKPK +E +++FVGNLSW++TSE ++ F +
Sbjct: 173 NLDGSQFMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVG 232
Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
ARV++D T +S+GYGF+ +A+ + E A+
Sbjct: 233 ARVLYDGETGRSRGYGFVCYATRSEMENAL 262
Score = 56.2 bits (134), Expect = 7e-06
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Frame = +1
Query: 172 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
K KEPL +L+VGNL ++ S L Q +G++ VL+D TG SRG+GF
Sbjct: 193 KPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVGARVLYDGETGRSRGYGFVCY 252
Query: 337 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPK 432
+ + + +L+G + GR +RV+ K
Sbjct: 253 ATRSEMENALVSLNGVELEGRAMRVSLAQGKK 284
>ref|XP_004497803.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer
arietinum]
Length = 371
Score = 171 bits (432), Expect = 2e-40
Identities = 81/155 (52%), Positives = 115/155 (74%), Gaps = 4/155 (2%)
Frame = +1
Query: 175 DKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDA 354
+++ ++LY GNLPY+ DSA+LAG+I+++GS E++EVL+DR+TG SRGF F TM+ I+D
Sbjct: 195 EEDTRTKLYFGNLPYSVDSAQLAGLIEDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDC 254
Query: 355 NAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTE 522
AVIENLDG+++ GRTLRVNF DKPK +E Y++FVGNLSW +TSE + + F
Sbjct: 255 KAVIENLDGNEFLGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWTVTSESLTQAFQEY 314
Query: 523 SKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
+ ARV++D T KS+GYGF+S+ S + E A+
Sbjct: 315 GTVVGARVLYDGETGKSRGYGFVSYGSKSEMEAAL 349
Score = 56.6 bits (135), Expect = 6e-06
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +1
Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
K KEPL +L+VGNL + S L Q +G+V VL+D TG SRG+GF +
Sbjct: 280 KPKEPLYPETEYKLFVGNLSWTVTSESLTQAFQEYGTVVGARVLYDGETGKSRGYGFVSY 339
Query: 337 TSIKDANAVIENLDGSQYGGRTLRVN 414
S + A + ++ + GR LRV+
Sbjct: 340 GSKSEMEAALSYMNNVELEGRALRVS 365
>ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus
trichocarpa] gi|222851516|gb|EEE89063.1| RNA-binding
protein RNP1 precursor [Populus trichocarpa]
Length = 279
Score = 169 bits (427), Expect = 8e-40
Identities = 83/163 (50%), Positives = 114/163 (69%), Gaps = 4/163 (2%)
Frame = +1
Query: 151 GGVDGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFA 330
G +G+ ++LY GNLPYN DSA+LAG+IQ +G+ E+VEVL+ R TG SRGF F
Sbjct: 94 GETEGEADQVPVNTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFV 153
Query: 331 TMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSER 498
TM+SI+D VIENLDGSQY GR LRVNF DKPK +E Y++F+GNLSW++TSE
Sbjct: 154 TMSSIEDCETVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSES 213
Query: 499 MLRIFSTESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
+ + F + ARV++D T KS+GYGF+ +++ ++ E A+
Sbjct: 214 LTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETAL 256
Score = 60.5 bits (145), Expect = 4e-07
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Frame = +1
Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
K KEPL +L++GNL ++ S L Q +G+V VL+D TG SRG+GF
Sbjct: 187 KPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCY 246
Query: 337 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPK 432
++ ++ +++L+G + GR LRV+ + K
Sbjct: 247 STKEELETALQSLNGVELEGRALRVSLAEGRK 278
>gb|EPS60926.1| hypothetical protein M569_13875, partial [Genlisea aurea]
Length = 184
Score = 168 bits (426), Expect = 1e-39
Identities = 79/150 (52%), Positives = 112/150 (74%), Gaps = 4/150 (2%)
Frame = +1
Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
++LY GNLPYNCDSA+LAGIIQ++ S E++EVL+DRNTG SRGF F TM+S+++ N VI+
Sbjct: 12 TKLYFGNLPYNCDSAQLAGIIQDYASPELIEVLYDRNTGRSRGFAFVTMSSVEECNTVIQ 71
Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
NLDGS++GGR +RVNF ++PK +E Y++FVGNLSW++TSE + F +
Sbjct: 72 NLDGSEFGGRIMRVNFSNQPKPKEPLYPETDYKLFVGNLSWSVTSESLREAFQQYGTVVG 131
Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
ARV++D T +S+GYGF+S+ + E A+
Sbjct: 132 ARVLYDGETGRSRGYGFVSYDTKTAMEAAL 161
Score = 62.0 bits (149), Expect = 1e-07
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Frame = +1
Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
K KEPL +L+VGNL ++ S L Q +G+V VL+D TG SRG+GF +
Sbjct: 92 KPKEPLYPETDYKLFVGNLSWSVTSESLREAFQQYGTVVGARVLYDGETGRSRGYGFVSY 151
Query: 337 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQ 435
+ A ++ LDG++ GR +R++ KQ
Sbjct: 152 DTKTAMEAALKTLDGAELEGRAIRISLAQGKKQ 184
>ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatula]
gi|355479222|gb|AES60425.1| 31 kDa ribonucleoprotein
[Medicago truncatula]
Length = 387
Score = 168 bits (426), Expect = 1e-39
Identities = 79/150 (52%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
Frame = +1
Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
++LY GNLPY+ DSA LAG+I+ +GS E++EVL+DR+TG SRGF F TM+ ++D NAVI+
Sbjct: 215 TKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQ 274
Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
NLDG ++ GRTLRVNF DKPK +E Y++FVGNL+W +TSE + + F +
Sbjct: 275 NLDGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVG 334
Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
ARV+FD T KS+GYGF+S+A+ + + A+
Sbjct: 335 ARVLFDGETGKSRGYGFVSYATKSEMDTAL 364
Score = 57.8 bits (138), Expect = 3e-06
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +1
Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
K KEPL +L+VGNL + S L Q G+V VLFD TG SRG+GF +
Sbjct: 295 KPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSY 354
Query: 337 TSIKDANAVIENLDGSQYGGRTLRVN 414
+ + + + +D + GRTLRV+
Sbjct: 355 ATKSEMDTALAIMDNVELEGRTLRVS 380
>gb|ACJ85270.1| unknown [Medicago truncatula]
Length = 285
Score = 168 bits (426), Expect = 1e-39
Identities = 79/150 (52%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
Frame = +1
Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
++LY GNLPY+ DSA LAG+I+ +GS E++EVL+DR+TG SRGF F TM+ ++D NAVI+
Sbjct: 113 TKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQ 172
Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
NLDG ++ GRTLRVNF DKPK +E Y++FVGNL+W +TSE + + F +
Sbjct: 173 NLDGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVG 232
Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
ARV+FD T KS+GYGF+S+A+ + + A+
Sbjct: 233 ARVLFDGETGKSRGYGFVSYATKSEMDTAL 262
Score = 57.8 bits (138), Expect = 3e-06
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +1
Query: 172 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 336
K KEPL +L+VGNL + S L Q G+V VLFD TG SRG+GF +
Sbjct: 193 KPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSY 252
Query: 337 TSIKDANAVIENLDGSQYGGRTLRVN 414
+ + + + +D + GRTLRV+
Sbjct: 253 ATKSEMDTALAIMDNVELEGRTLRVS 278
>ref|XP_004296531.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 297
Score = 168 bits (425), Expect = 1e-39
Identities = 80/150 (53%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
Frame = +1
Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
++LY GNLPY+ DSA+LAGIIQ++ S E++EVL+ R+TG SRGF F TM+S++D NAVIE
Sbjct: 125 TKLYFGNLPYSVDSAQLAGIIQDYASPELIEVLYHRDTGKSRGFAFVTMSSVEDCNAVIE 184
Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
NLDG +Y GRTLRVNF DKP+ +E Y++FVGNLSW+ TSE + + F +
Sbjct: 185 NLDGREYSGRTLRVNFSDKPRAKEPLYPETEYKLFVGNLSWSATSESLTKAFQEYGNVVG 244
Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
ARV++D T +S+GYGF+ F++ + E A+
Sbjct: 245 ARVLYDGETGRSRGYGFVCFSTKAEMETAL 274
Score = 59.7 bits (143), Expect = 7e-07
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +1
Query: 178 KEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTS 342
KEPL +L+VGNL ++ S L Q +G+V VL+D TG SRG+GF ++
Sbjct: 207 KEPLYPETEYKLFVGNLSWSATSESLTKAFQEYGNVVGARVLYDGETGRSRGYGFVCFST 266
Query: 343 IKDANAVIENLDGSQYGGRTLRVNFPD 423
+ +++LDG + GR +RV+ +
Sbjct: 267 KAEMETALQSLDGVELEGRAMRVSLAE 293
>emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
gi|561018539|gb|ESW17343.1| hypothetical protein
PHAVU_007G231600g [Phaseolus vulgaris]
Length = 287
Score = 167 bits (424), Expect = 2e-39
Identities = 80/158 (50%), Positives = 117/158 (74%), Gaps = 4/158 (2%)
Frame = +1
Query: 166 DNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSI 345
D+ + ++LY GNLPY+ DSA+LAG+IQ++GS E++EVL+DR+TG SRGF F TM+ I
Sbjct: 105 DSDESFASTKLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCI 164
Query: 346 KDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIF 513
+D NAVIENLDG +Y GRTLRVNF +KPK +E +++FVGNLSW++T+E + + F
Sbjct: 165 EDCNAVIENLDGKEYLGRTLRVNFSNKPKAKEPLYPETEHKLFVGNLSWSVTNEILTQAF 224
Query: 514 STESKPLSARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
+ ARV++D T +S+GYGF+ F++ ++ E A+
Sbjct: 225 QEYGTVVGARVLYDGETGRSRGYGFVCFSTKEEMEAAL 262
>gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 167 bits (422), Expect = 3e-39
Identities = 77/150 (51%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
Frame = +1
Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
++LY GNLPYNCDSA+LAGI+Q + S E+VEVL+DR TG SRGF F TMT+++D VI+
Sbjct: 116 TKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIK 175
Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
NLDGS YGGRT++VNF D+PK ++ +++FVGNLSW +TSE + F +
Sbjct: 176 NLDGSLYGGRTMKVNFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVG 235
Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
ARV++D T +S+GYGF+ +++ ++ +EA+
Sbjct: 236 ARVLYDGETGRSRGYGFVCYSTREEMDEAL 265
>ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 167 bits (422), Expect = 3e-39
Identities = 77/150 (51%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
Frame = +1
Query: 190 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 369
++LY GNLPYNCDSA+LAGI+Q + S E+VEVL+DR TG SRGF F TMT+++D VI+
Sbjct: 116 TKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIK 175
Query: 370 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTESKPLS 537
NLDGS YGGRT++VNF D+PK ++ +++FVGNLSW +TSE + F +
Sbjct: 176 NLDGSLYGGRTMKVNFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVG 235
Query: 538 ARVVFDPHTKKSKGYGFLSFASSDDAEEAV 627
ARV++D T +S+GYGF+ +++ ++ +EA+
Sbjct: 236 ARVLYDGETGRSRGYGFVCYSTREEMDEAL 265