BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00000547
         (591 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21876.1| unknown [Picea sitchensis] gi|116782420|gb|ABK224...   205   6e-51
gb|ABK22359.1| unknown [Picea sitchensis]                             205   6e-51
gb|ABK21852.1| unknown [Picea sitchensis]                             205   6e-51
gb|ABK26083.1| unknown [Picea sitchensis]                             204   1e-50
gb|ABK21347.1| unknown [Picea sitchensis] gi|116780861|gb|ABK218...   204   1e-50
gb|ACN40281.1| unknown [Picea sitchensis]                             203   2e-50
gb|ACN40169.1| unknown [Picea sitchensis]                             203   2e-50
gb|ACN40080.1| unknown [Picea sitchensis]                             203   2e-50
gb|ACN39774.1| unknown [Picea sitchensis]                             203   2e-50
gb|ABK21447.1| unknown [Picea sitchensis] gi|116780594|gb|ABK217...   203   2e-50
gb|ABK21690.1| unknown [Picea sitchensis]                             203   2e-50
gb|ABK21259.1| unknown [Picea sitchensis] gi|116779401|gb|ABK212...   203   2e-50
sp|P10053.1|RBS_PINTH RecName: Full=Ribulose bisphosphate carbox...   197   1e-48
gb|ACN39871.1| unknown [Picea sitchensis]                             195   7e-48
sp|P19310.1|RBS4_LEMGI RecName: Full=Ribulose bisphosphate carbo...   191   1e-46
sp|P16031.1|RBS_LARLA RecName: Full=Ribulose bisphosphate carbox...   191   1e-46
sp|P19309.1|RBS3_LEMGI RecName: Full=Ribulose bisphosphate carbo...   191   2e-46
ref|XP_006405770.1| hypothetical protein EUTSA_v10027955mg [Eutr...   190   3e-46
ref|XP_002868775.1| ribulose bisphosphate carboxylase small chai...   189   4e-46
sp|P27985.1|RBS2_BRANA RecName: Full=Ribulose bisphosphate carbo...   189   5e-46

>gb|ABK21876.1| unknown [Picea sitchensis] gi|116782420|gb|ABK22499.1| unknown
           [Picea sitchensis] gi|116784603|gb|ABK23405.1| unknown
           [Picea sitchensis] gi|116793621|gb|ABK26814.1| unknown
           [Picea sitchensis] gi|116793637|gb|ABK26822.1| unknown
           [Picea sitchensis] gi|116794195|gb|ABK27041.1| unknown
           [Picea sitchensis] gi|148907673|gb|ABR16965.1| unknown
           [Picea sitchensis] gi|224285721|gb|ACN40576.1| unknown
           [Picea sitchensis]
          Length = 193

 Score =  205 bits (522), Expect = 6e-51
 Identities = 105/190 (55%), Positives = 121/190 (63%), Gaps = 20/190 (10%)
 Frame = +1

Query: 19  MASTLLSSPAMSMTAVAPVKTS-------------VVGLRP-------LEVCXXXXXXXX 138
           MAS ++SS A      AP KTS               GL+        +++         
Sbjct: 1   MASAIMSSAAAMAAVAAPPKTSNGNGSSNGNVVSAFTGLKSTAQFPSSMKISNAGAEWER 60

Query: 139 XXXXXXXXXXXMLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGA 318
                      M VWP  +N KFETLSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G 
Sbjct: 61  KTTSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGI 120

Query: 319 ISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQV 498
           I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQV
Sbjct: 121 IKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQV 180

Query: 499 QCISFIVHKP 528
           QCISFIVHKP
Sbjct: 181 QCISFIVHKP 190


>gb|ABK22359.1| unknown [Picea sitchensis]
          Length = 193

 Score =  205 bits (522), Expect = 6e-51
 Identities = 105/190 (55%), Positives = 121/190 (63%), Gaps = 20/190 (10%)
 Frame = +1

Query: 19  MASTLLSSPAMSMTAVAPVKTS-------------VVGLRP-------LEVCXXXXXXXX 138
           MAS ++SS A      AP KTS               GL+        +++         
Sbjct: 1   MASAIMSSAAAMAAVAAPPKTSNGSGSSNGNVVSAFTGLKSTAQFPSSMKISNAGAEWER 60

Query: 139 XXXXXXXXXXXMLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGA 318
                      M VWP  +N KFETLSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G 
Sbjct: 61  KTTSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGI 120

Query: 319 ISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQV 498
           I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQV
Sbjct: 121 IKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQV 180

Query: 499 QCISFIVHKP 528
           QCISFIVHKP
Sbjct: 181 QCISFIVHKP 190


>gb|ABK21852.1| unknown [Picea sitchensis]
          Length = 193

 Score =  205 bits (522), Expect = 6e-51
 Identities = 105/190 (55%), Positives = 121/190 (63%), Gaps = 20/190 (10%)
 Frame = +1

Query: 19  MASTLLSSPAMSMTAVAPVKTS-------------VVGLRP-------LEVCXXXXXXXX 138
           MAS ++SS A      AP KTS               GL+        +++         
Sbjct: 1   MASAIMSSAAAMAAVAAPPKTSNGNGSSNGNVVAAFTGLKSTAQFPSSMKISNAGAEWER 60

Query: 139 XXXXXXXXXXXMLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGA 318
                      M VWP  +N KFETLSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G 
Sbjct: 61  KTTSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGI 120

Query: 319 ISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQV 498
           I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQV
Sbjct: 121 IKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQV 180

Query: 499 QCISFIVHKP 528
           QCISFIVHKP
Sbjct: 181 QCISFIVHKP 190


>gb|ABK26083.1| unknown [Picea sitchensis]
          Length = 159

 Score =  204 bits (520), Expect = 1e-50
 Identities = 92/119 (77%), Positives = 102/119 (85%)
 Frame = +1

Query: 172 MLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGY 351
           M VWP  +N KFETLSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G I RKYG+TPGY
Sbjct: 38  MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGIIKRKYGSTPGY 97

Query: 352 YDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           YDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 98  YDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 156


>gb|ABK21347.1| unknown [Picea sitchensis] gi|116780861|gb|ABK21851.1| unknown
           [Picea sitchensis] gi|148905962|gb|ABR16142.1| unknown
           [Picea sitchensis] gi|224284092|gb|ACN39783.1| unknown
           [Picea sitchensis] gi|224284864|gb|ACN40162.1| unknown
           [Picea sitchensis] gi|224285028|gb|ACN40243.1| unknown
           [Picea sitchensis]
          Length = 195

 Score =  204 bits (520), Expect = 1e-50
 Identities = 92/119 (77%), Positives = 102/119 (85%)
 Frame = +1

Query: 172 MLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGY 351
           M VWP  +N KFETLSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G I RKYG+TPGY
Sbjct: 74  MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGIIKRKYGSTPGY 133

Query: 352 YDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           YDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 134 YDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 192


>gb|ACN40281.1| unknown [Picea sitchensis]
          Length = 194

 Score =  203 bits (517), Expect = 2e-50
 Identities = 91/119 (76%), Positives = 102/119 (85%)
 Frame = +1

Query: 172 MLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGY 351
           M VWP  +N KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+TPGY
Sbjct: 73  MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGSTPGY 132

Query: 352 YDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           YDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 133 YDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 191


>gb|ACN40169.1| unknown [Picea sitchensis]
          Length = 194

 Score =  203 bits (517), Expect = 2e-50
 Identities = 91/119 (76%), Positives = 102/119 (85%)
 Frame = +1

Query: 172 MLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGY 351
           M VWP  +N KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+TPGY
Sbjct: 73  MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGSTPGY 132

Query: 352 YDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           YDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 133 YDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 191


>gb|ACN40080.1| unknown [Picea sitchensis]
          Length = 183

 Score =  203 bits (517), Expect = 2e-50
 Identities = 91/119 (76%), Positives = 102/119 (85%)
 Frame = +1

Query: 172 MLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGY 351
           M VWP  +N KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+TPGY
Sbjct: 62  MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGSTPGY 121

Query: 352 YDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           YDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 122 YDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 180


>gb|ACN39774.1| unknown [Picea sitchensis]
          Length = 136

 Score =  203 bits (517), Expect = 2e-50
 Identities = 91/119 (76%), Positives = 102/119 (85%)
 Frame = +1

Query: 172 MLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGY 351
           M VWP  +N KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+TPGY
Sbjct: 15  MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGSTPGY 74

Query: 352 YDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           YDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 75  YDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 133


>gb|ABK21447.1| unknown [Picea sitchensis] gi|116780594|gb|ABK21733.1| unknown
           [Picea sitchensis] gi|116782047|gb|ABK22347.1| unknown
           [Picea sitchensis] gi|116783228|gb|ABK22845.1| unknown
           [Picea sitchensis] gi|116785645|gb|ABK23805.1| unknown
           [Picea sitchensis] gi|116785985|gb|ABK23931.1| unknown
           [Picea sitchensis] gi|116786044|gb|ABK23949.1| unknown
           [Picea sitchensis] gi|116790039|gb|ABK25479.1| unknown
           [Picea sitchensis] gi|116793644|gb|ABK26825.1| unknown
           [Picea sitchensis] gi|224284814|gb|ACN40137.1| unknown
           [Picea sitchensis] gi|224285468|gb|ACN40456.1| unknown
           [Picea sitchensis] gi|224285619|gb|ACN40528.1| unknown
           [Picea sitchensis] gi|224285683|gb|ACN40557.1| unknown
           [Picea sitchensis]
          Length = 194

 Score =  203 bits (517), Expect = 2e-50
 Identities = 91/119 (76%), Positives = 102/119 (85%)
 Frame = +1

Query: 172 MLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGY 351
           M VWP  +N KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+TPGY
Sbjct: 73  MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGSTPGY 132

Query: 352 YDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           YDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 133 YDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 191


>gb|ABK21690.1| unknown [Picea sitchensis]
          Length = 194

 Score =  203 bits (517), Expect = 2e-50
 Identities = 91/119 (76%), Positives = 102/119 (85%)
 Frame = +1

Query: 172 MLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGY 351
           M VWP  +N KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+TPGY
Sbjct: 73  MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGSTPGY 132

Query: 352 YDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           YDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 133 YDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 191


>gb|ABK21259.1| unknown [Picea sitchensis] gi|116779401|gb|ABK21267.1| unknown
           [Picea sitchensis] gi|116779440|gb|ABK21283.1| unknown
           [Picea sitchensis] gi|116781990|gb|ABK22328.1| unknown
           [Picea sitchensis] gi|116782020|gb|ABK22337.1| unknown
           [Picea sitchensis] gi|116782035|gb|ABK22342.1| unknown
           [Picea sitchensis] gi|116784457|gb|ABK23349.1| unknown
           [Picea sitchensis] gi|116785630|gb|ABK23799.1| unknown
           [Picea sitchensis] gi|116786299|gb|ABK24056.1| unknown
           [Picea sitchensis] gi|116791702|gb|ABK26077.1| unknown
           [Picea sitchensis] gi|116792861|gb|ABK26530.1| unknown
           [Picea sitchensis] gi|148905732|gb|ABR16030.1| unknown
           [Picea sitchensis] gi|224284032|gb|ACN39754.1| unknown
           [Picea sitchensis] gi|224284134|gb|ACN39804.1| unknown
           [Picea sitchensis] gi|224284171|gb|ACN39822.1| unknown
           [Picea sitchensis] gi|224284301|gb|ACN39886.1| unknown
           [Picea sitchensis] gi|224284342|gb|ACN39906.1| unknown
           [Picea sitchensis] gi|224284389|gb|ACN39929.1| unknown
           [Picea sitchensis] gi|224284796|gb|ACN40128.1| unknown
           [Picea sitchensis] gi|224284941|gb|ACN40200.1| unknown
           [Picea sitchensis] gi|224284998|gb|ACN40228.1| unknown
           [Picea sitchensis] gi|224285010|gb|ACN40234.1| unknown
           [Picea sitchensis] gi|224285109|gb|ACN40282.1| unknown
           [Picea sitchensis] gi|224285123|gb|ACN40289.1| unknown
           [Picea sitchensis] gi|224285656|gb|ACN40544.1| unknown
           [Picea sitchensis] gi|224285893|gb|ACN40660.1| unknown
           [Picea sitchensis]
          Length = 194

 Score =  203 bits (517), Expect = 2e-50
 Identities = 91/119 (76%), Positives = 102/119 (85%)
 Frame = +1

Query: 172 MLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGY 351
           M VWP  +N KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+TPGY
Sbjct: 73  MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGSTPGY 132

Query: 352 YDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           YDGRYW MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 133 YDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 191


>sp|P10053.1|RBS_PINTH RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|20958|emb|CAA31774.1| ribulose bisphosphate
           carboxylase preprotein [Pinus thunbergii]
          Length = 171

 Score =  197 bits (502), Expect = 1e-48
 Identities = 89/119 (74%), Positives = 100/119 (84%)
 Frame = +1

Query: 172 MLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGY 351
           M VWP   N KFETLSYLP LT+EQL KE++YLLRNKWVPCLEFD EG+ISRKY  +PGY
Sbjct: 52  MQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGY 111

Query: 352 YDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           YDGRYW MWKLPMFGC +++ V+ E+ E  KAYPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 112 YDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170


>gb|ACN39871.1| unknown [Picea sitchensis]
          Length = 136

 Score =  195 bits (496), Expect = 7e-48
 Identities = 87/112 (77%), Positives = 98/112 (87%)
 Frame = +1

Query: 193 DNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGYYDGRYWT 372
           +N KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+TPGYYDGRYW 
Sbjct: 22  NNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGSTPGYYDGRYWV 81

Query: 373 MWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           MWKLPMFGC +++ VL E+ E  KAYPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 82  MWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 133


>sp|P19310.1|RBS4_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU40B,
           chloroplastic; Short=RuBisCO small subunit SSU40B;
           Flags: Precursor gi|295819|emb|CAA35103.1| ribulose
           bisphosphate carboxylase [Lemna gibba]
          Length = 177

 Score =  191 bits (485), Expect = 1e-46
 Identities = 92/176 (52%), Positives = 116/176 (65%), Gaps = 6/176 (3%)
 Frame = +1

Query: 19  MASTLLSSPAMSMTAVAPVKTSVVGLR------PLEVCXXXXXXXXXXXXXXXXXXXMLV 180
           MAS++++S A ++    P +T++V         P                       M V
Sbjct: 1   MASSMMASTAAAVARAGPAQTNMVPFNACRSSVPFPATRKANNDLSTLPSNGGRVSCMQV 60

Query: 181 WPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGYYDG 360
           WP +   KFETLSYLPPL+ E L+KE+DYLLRN WVPC+EF +EG + R+  A+PGYYDG
Sbjct: 61  WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDG 120

Query: 361 RYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           RYWTMWKLPMFGC D++ V+ E+EE KKAYP+ FVR IGFDN RQVQCISFI +KP
Sbjct: 121 RYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176


>sp|P16031.1|RBS_LARLA RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|295822|emb|CAA34161.1|
           ribulose-1,5-carboxylase/oxygenase [Larix laricina]
          Length = 189

 Score =  191 bits (485), Expect = 1e-46
 Identities = 86/119 (72%), Positives = 97/119 (81%)
 Frame = +1

Query: 172 MLVWPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGY 351
           M VWP   N KFETLSYLP LT EQL KE++YLL+NKWVPCLEF+E+G I R YG +PGY
Sbjct: 68  MQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKRVYGNSPGY 127

Query: 352 YDGRYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           YDGRYW MWKLPMFGC +++ VL E+ E  KAYP AF+R IGFDN RQVQCISFIVHKP
Sbjct: 128 YDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKP 186


>sp|P19309.1|RBS3_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU40A,
           chloroplastic; Short=RuBisCO small subunit SSU40A;
           Flags: Precursor gi|295818|emb|CAA35102.1| ribulose
           bisphosphate carboxylase [Lemna gibba]
          Length = 177

 Score =  191 bits (484), Expect = 2e-46
 Identities = 92/176 (52%), Positives = 116/176 (65%), Gaps = 6/176 (3%)
 Frame = +1

Query: 19  MASTLLSSPAMSMTAVAPVKTSVVGLR------PLEVCXXXXXXXXXXXXXXXXXXXMLV 180
           MAS++++S A ++    P ++S+V         P                       M V
Sbjct: 1   MASSMMASTAAAVARAGPAQSSMVPFNACRSSVPFPATRKANNNLSTLPGNGGRVSCMQV 60

Query: 181 WPNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGAISRKYGATPGYYDG 360
           WP +   KFETLSYLPPL+ E L+KE+DYLLRN WVPC+EF +EG + R+  A+PGYYDG
Sbjct: 61  WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDG 120

Query: 361 RYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           RYWTMWKLPMFGC D++ V+ E+EE KKAYP+ FVR IGFDN RQVQCISFI +KP
Sbjct: 121 RYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176


>ref|XP_006405770.1| hypothetical protein EUTSA_v10027955mg [Eutrema salsugineum]
           gi|557106908|gb|ESQ47223.1| hypothetical protein
           EUTSA_v10027955mg [Eutrema salsugineum]
          Length = 181

 Score =  190 bits (482), Expect = 3e-46
 Identities = 96/176 (54%), Positives = 118/176 (67%), Gaps = 6/176 (3%)
 Frame = +1

Query: 19  MASTLLSSPAM-----SMTAVAPVKTSVVGLRPLEVCXXXXXXXXXXXXXXXXXXXMLVW 183
           MAS++LSS A+       T VAP  T +       V                    M VW
Sbjct: 1   MASSMLSSAAVVTSPAQATMVAPF-TGLKSSAAFPVTRKTNTDITSIASNGGRVSCMKVW 59

Query: 184 PNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGAISRKYGATPGYYDG 360
           P     KFETLSYLP LT+ +L+KE+DYLLRNKW+PC+EF+ E G + R++G+TPGYYDG
Sbjct: 60  PPIGKKKFETLSYLPDLTEVELAKEVDYLLRNKWIPCVEFELENGFVHREHGSTPGYYDG 119

Query: 361 RYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           RYWTMWKLP+FGC DSA VL+E++E KK YP+AF+R IGFDN RQVQCISFI +KP
Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKKEYPQAFIRIIGFDNTRQVQCISFIAYKP 175


>ref|XP_002868775.1| ribulose bisphosphate carboxylase small chain 1B [Arabidopsis
           lyrata subsp. lyrata] gi|297314611|gb|EFH45034.1|
           ribulose bisphosphate carboxylase small chain 1B
           [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score =  189 bits (481), Expect = 4e-46
 Identities = 97/176 (55%), Positives = 116/176 (65%), Gaps = 6/176 (3%)
 Frame = +1

Query: 19  MASTLLSSPAM-----SMTAVAPVKTSVVGLRPLEVCXXXXXXXXXXXXXXXXXXXMLVW 183
           MAS++LSS A+       T VAP  T +       V                    M VW
Sbjct: 1   MASSMLSSAAVVTSPAQATMVAPF-TGLKSSATFPVTRKANNDITSISSNGGRVSCMKVW 59

Query: 184 PNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGAISRKYGATPGYYDG 360
           P     KFETLSYLP LT  +L+KE+DYLLRNKW+PC+EF+ E G + R++G TPGYYDG
Sbjct: 60  PPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDG 119

Query: 361 RYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           RYWTMWKLP+FGC DSA VL+E++E KK YP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 175


>sp|P27985.1|RBS2_BRANA RecName: Full=Ribulose bisphosphate carboxylase small chain F1,
           chloroplastic; Short=RuBisCO small subunit F1; Flags:
           Precursor gi|17852|emb|CAA39402.1| ribulose bisphosphate
           carboxylase /oxygenase small subunit [Brassica napus]
          Length = 181

 Score =  189 bits (480), Expect = 5e-46
 Identities = 96/176 (54%), Positives = 116/176 (65%), Gaps = 6/176 (3%)
 Frame = +1

Query: 19  MASTLLSSPAM-----SMTAVAPVKTSVVGLRPLEVCXXXXXXXXXXXXXXXXXXXMLVW 183
           MAS++LSS A+       T VAP  T +       V                    M VW
Sbjct: 1   MASSMLSSAAVVTSPAQATMVAPF-TGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVW 59

Query: 184 PNKDNIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGAISRKYGATPGYYDG 360
           P     KFETLSYLP LT+ +L KE+DYLLRNKW+PC+EF+ E G + R++G+TPGYYDG
Sbjct: 60  PPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDG 119

Query: 361 RYWTMWKLPMFGCNDSALVLREIEEVKKAYPKAFVRCIGFDNNRQVQCISFIVHKP 528
           RYWTMWKLP+FGC DSA VL+E++E K  YP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKP 175