BLASTX nr result

ID: Ephedra28_contig00000283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00000283
         (392 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003579548.1| PREDICTED: transportin-1 [Brachypodium dista...    56   6e-06
gb|EOY15130.1| Transportin 1 isoform 1 [Theobroma cacao]               55   1e-05

>ref|XP_003579548.1| PREDICTED: transportin-1 [Brachypodium distachyon]
          Length = 894

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/39 (56%), Positives = 30/39 (76%)
 Frame = -3

Query: 387 SEICQVLQGFKQVLGEAGWEQLMSAIEPQAKAKLQKYGV 271
           +E+CQ+L G+KQ+LG AGWEQ MS +EP    +L +YGV
Sbjct: 856 NEVCQILNGYKQMLGSAGWEQCMSTLEPAVVQRLARYGV 894


>gb|EOY15130.1| Transportin 1 isoform 1 [Theobroma cacao]
          Length = 910

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = -3

Query: 387 SEICQVLQGFKQVLGEAGWEQLMSAIEPQAKAKLQKYG 274
           +E+CQ+L G+KQ+L + GWEQ +S +EPQ K KL  YG
Sbjct: 851 NEVCQILLGYKQILKDGGWEQCLSTLEPQVKEKLSNYG 888


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