BLASTX nr result

ID: Ephedra28_contig00000238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00000238
         (971 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21166.1| unknown [Picea sitchensis]                              79   3e-12
ref|XP_006602410.1| PREDICTED: uncharacterized protein LOC100791...    59   2e-06
ref|XP_006602409.1| PREDICTED: uncharacterized protein LOC100791...    59   2e-06
ref|XP_006602408.1| PREDICTED: uncharacterized protein LOC100791...    59   2e-06
ref|XP_003552043.1| PREDICTED: uncharacterized protein LOC100791...    59   2e-06
ref|XP_006585936.1| PREDICTED: uncharacterized protein LOC100798...    59   4e-06
ref|XP_002530033.1| conserved hypothetical protein [Ricinus comm...    59   4e-06

>gb|ABK21166.1| unknown [Picea sitchensis]
          Length = 110

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 37/63 (58%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = -2

Query: 454 TPHSRNCLCSPTTHAGSFRCRLHRSLQRRWSLGE-RQPSPPASKLDTSLVEASDTVKALV 278
           TP+++NCLCSPTTHAGSFRCRLHRSLQ++WS+G  R PSPP  ++    V +++TV   V
Sbjct: 48  TPNAKNCLCSPTTHAGSFRCRLHRSLQKQWSIGSYRLPSPPPEEVQ---VPSTETVPKPV 104

Query: 277 DYN 269
           + N
Sbjct: 105 EEN 107


>ref|XP_006602410.1| PREDICTED: uncharacterized protein LOC100791587 isoform X6 [Glycine
           max]
          Length = 127

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
 Frame = -2

Query: 463 QSPTPHSRNCLCSPTTHAGSFRCRLHR--SLQRRWSLGERQPSPPASKLDTSLVEA 302
           + P+    NCLCSPTTH+GSFRCRLHR  SLQR  S+        ASK+  S+V+A
Sbjct: 62  RQPSMTKNNCLCSPTTHSGSFRCRLHRSPSLQRTKSMESESLRDHASKVHASIVDA 117


>ref|XP_006602409.1| PREDICTED: uncharacterized protein LOC100791587 isoform X5 [Glycine
           max]
          Length = 131

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
 Frame = -2

Query: 463 QSPTPHSRNCLCSPTTHAGSFRCRLHR--SLQRRWSLGERQPSPPASKLDTSLVEA 302
           + P+    NCLCSPTTH+GSFRCRLHR  SLQR  S+        ASK+  S+V+A
Sbjct: 66  RQPSMTKNNCLCSPTTHSGSFRCRLHRSPSLQRTKSMESESLRDHASKVHASIVDA 121


>ref|XP_006602408.1| PREDICTED: uncharacterized protein LOC100791587 isoform X4 [Glycine
           max]
          Length = 140

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
 Frame = -2

Query: 463 QSPTPHSRNCLCSPTTHAGSFRCRLHR--SLQRRWSLGERQPSPPASKLDTSLVEA 302
           + P+    NCLCSPTTH+GSFRCRLHR  SLQR  S+        ASK+  S+V+A
Sbjct: 75  RQPSMTKNNCLCSPTTHSGSFRCRLHRSPSLQRTKSMESESLRDHASKVHASIVDA 130


>ref|XP_003552043.1| PREDICTED: uncharacterized protein LOC100791587 isoformX3 [Glycine
           max]
          Length = 110

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
 Frame = -2

Query: 463 QSPTPHSRNCLCSPTTHAGSFRCRLHR--SLQRRWSLGERQPSPPASKLDTSLVEA 302
           + P+    NCLCSPTTH+GSFRCRLHR  SLQR  S+        ASK+  S+V+A
Sbjct: 45  RQPSMTKNNCLCSPTTHSGSFRCRLHRSPSLQRTKSMESESLRDHASKVHASIVDA 100


>ref|XP_006585936.1| PREDICTED: uncharacterized protein LOC100798943 [Glycine max]
          Length = 106

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
 Frame = -2

Query: 463 QSPTPHSRNCLCSPTTHAGSFRCRLHR--SLQRRWSLGERQPSPPASKLDTSLVEA 302
           + P+    NCLCSPTTHAGSFRCRLHR  SLQR  S+        AS + +S+V+A
Sbjct: 41  RQPSMTKSNCLCSPTTHAGSFRCRLHRAPSLQRTKSMESESLRDQASTVHSSIVDA 96


>ref|XP_002530033.1| conserved hypothetical protein [Ricinus communis]
           gi|223530449|gb|EEF32333.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
 Frame = -2

Query: 463 QSPTPHSRNCLCSPTTHAGSFRCRLHR--SLQRRWSLGERQPSPPASKLDTSLVEASDTV 290
           + P+    +CLCSPT+HAGSFRCRLHR  +LQR  S+    P  P S++D +   A D  
Sbjct: 38  RQPSVTKSSCLCSPTSHAGSFRCRLHRAPTLQRTKSIDSASPRGPFSQVDAT---ADDAT 94

Query: 289 KALVDYNL 266
            A +  N+
Sbjct: 95  SATISANI 102


Top