BLASTX nr result
ID: Ephedra28_contig00000229
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00000229
(515 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK20990.1| unknown [Picea sitchensis] gi|116780441|gb|ABK216... 156 3e-36
ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide... 152 3e-35
ref|XP_003557640.1| PREDICTED: LOW QUALITY PROTEIN: photosystem ... 152 6e-35
gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza] 152 6e-35
ref|XP_002459340.1| hypothetical protein SORBIDRAFT_02g002830 [S... 152 6e-35
gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like pr... 151 1e-34
gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like pr... 151 1e-34
ref|NP_001134061.1| Photosystem II 10 kDa polypeptide, chloropla... 151 1e-34
ref|XP_006836429.1| hypothetical protein AMTR_s00092p00162140 [A... 150 1e-34
gb|EMT17346.1| Photosystem II 10 kDa polypeptide, chloroplastic ... 150 1e-34
gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides] 150 2e-34
gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]... 150 2e-34
ref|NP_001275173.1| photosystem II 10 kDa polypeptide, chloropla... 150 2e-34
ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloropla... 149 3e-34
emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum lycope... 149 3e-34
emb|CAA27989.1| unnamed protein product [Solanum tuberosum] 149 3e-34
ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Popu... 149 3e-34
ref|XP_002317016.1| polypeptide precursor of photosystem II fami... 149 3e-34
gb|AGS13734.1| chloroplast photosystem II protein [Brassica rapa... 149 4e-34
sp|Q40070.1|PSBR_HORVU RecName: Full=Photosystem II 10 kDa polyp... 149 4e-34
>gb|ABK20990.1| unknown [Picea sitchensis] gi|116780441|gb|ABK21682.1| unknown
[Picea sitchensis] gi|116782098|gb|ABK22369.1| unknown
[Picea sitchensis] gi|116784501|gb|ABK23366.1| unknown
[Picea sitchensis] gi|116789036|gb|ABK25094.1| unknown
[Picea sitchensis] gi|116790690|gb|ABK25703.1| unknown
[Picea sitchensis] gi|224285151|gb|ACN40303.1| unknown
[Picea sitchensis]
Length = 150
Score = 156 bits (394), Expect = 3e-36
Identities = 72/93 (77%), Positives = 79/93 (84%)
Frame = -1
Query: 365 KTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVY 186
K D+PLGPSG+ +FR G DAGGRKPKGKGVYQF KYGANVDGYSPIY ++WS GDVY
Sbjct: 58 KVDEPLGPSGDLTFRNGVDAGGRKPKGKGVYQFTSKYGANVDGYSPIYDTKDWSPTGDVY 117
Query: 185 VGGKTGLLIWAITLTGVLIGGALLVYNTSALAG 87
VGGKTGLLIWAIT +L GGALLVYNTSAL+G
Sbjct: 118 VGGKTGLLIWAITFAAILGGGALLVYNTSALSG 150
>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
vinifera] gi|147789486|emb|CAN71762.1| hypothetical
protein VITISV_021149 [Vitis vinifera]
gi|296082806|emb|CBI21811.3| unnamed protein product
[Vitis vinifera]
Length = 139
Score = 152 bits (385), Expect = 3e-35
Identities = 78/114 (68%), Positives = 83/114 (72%), Gaps = 5/114 (4%)
Frame = -1
Query: 416 GLPSL-----SAXXXXXXXXXXKTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYG 252
GLPSL S KTD+P G G G DA GRK KGKGVYQFVDKYG
Sbjct: 25 GLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMKLSDGLDASGRKGKGKGVYQFVDKYG 84
Query: 251 ANVDGYSPIYSPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
ANVDGYSPIYSP+EWS GGDVYVGG TGLLIWA+TL G+L+GGALLVYNTSALA
Sbjct: 85 ANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVTLAGLLLGGALLVYNTSALA 138
>ref|XP_003557640.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II 10 kDa polypeptide,
chloroplastic-like [Brachypodium distachyon]
Length = 138
Score = 152 bits (383), Expect = 6e-35
Identities = 70/92 (76%), Positives = 79/92 (85%)
Frame = -1
Query: 365 KTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVY 186
+T QP GPSGE F+ G DA GR KGKGVYQF +KYGANVDGYSPIY+PEEWS GDVY
Sbjct: 46 QTSQPYGPSGEVVFKEGVDASGRVAKGKGVYQFSNKYGANVDGYSPIYTPEEWSPSGDVY 105
Query: 185 VGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
VGGKTGL +WA+TLTG+L+GGALLVY+TSALA
Sbjct: 106 VGGKTGLFLWAVTLTGILLGGALLVYSTSALA 137
>gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
Length = 138
Score = 152 bits (383), Expect = 6e-35
Identities = 72/92 (78%), Positives = 76/92 (82%)
Frame = -1
Query: 365 KTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVY 186
KTD P G G + G DA GRK KGKGVYQFVDKYGANVDGYSPIYSP+EWS GDVY
Sbjct: 46 KTDTPFGIGGGMKLKDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVY 105
Query: 185 VGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
VGGKTGLLIWA+TL G+L GGALLVYNTSALA
Sbjct: 106 VGGKTGLLIWAVTLAGLLAGGALLVYNTSALA 137
>ref|XP_002459340.1| hypothetical protein SORBIDRAFT_02g002830 [Sorghum bicolor]
gi|241922717|gb|EER95861.1| hypothetical protein
SORBIDRAFT_02g002830 [Sorghum bicolor]
Length = 137
Score = 152 bits (383), Expect = 6e-35
Identities = 68/92 (73%), Positives = 78/92 (84%)
Frame = -1
Query: 365 KTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVY 186
KT QP GP+G + + G DA GR KGKGVYQF +KYGANVDGYSPIY+PEEWS GDVY
Sbjct: 45 KTSQPFGPAGGLNLKDGVDASGRPAKGKGVYQFANKYGANVDGYSPIYNPEEWSPSGDVY 104
Query: 185 VGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
VGGKTGLL+WA+TL G+L+GGALL+YNTSALA
Sbjct: 105 VGGKTGLLLWAVTLAGILLGGALLIYNTSALA 136
>gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza] gi|339716046|gb|AEJ88270.1| putative
chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 151 bits (381), Expect = 1e-34
Identities = 72/92 (78%), Positives = 75/92 (81%)
Frame = -1
Query: 365 KTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVY 186
KTD P G G + G DA GRK KGKGVYQFVDKYGANVDGYSPIYSP+EWS GDVY
Sbjct: 46 KTDTPFGTGGGMKLKDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVY 105
Query: 185 VGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
VGGKTGLLIWA TL G+L GGALLVYNTSALA
Sbjct: 106 VGGKTGLLIWAATLAGLLAGGALLVYNTSALA 137
>gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza] gi|351066200|gb|AEQ39074.1| putative
chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 151 bits (381), Expect = 1e-34
Identities = 72/92 (78%), Positives = 75/92 (81%)
Frame = -1
Query: 365 KTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVY 186
KTD P G G + G DA GRK KGKGVYQFVDKYGANVDGYSPIYSP+EWS GDVY
Sbjct: 46 KTDTPFGTGGGMKLKDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVY 105
Query: 185 VGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
VGGKTGLLIWA TL G+L GGALLVYNTSALA
Sbjct: 106 VGGKTGLLIWAATLAGLLAGGALLVYNTSALA 137
>ref|NP_001134061.1| Photosystem II 10 kDa polypeptide, chloroplast [Salmo salar]
gi|209730436|gb|ACI66087.1| Photosystem II 10 kDa
polypeptide, chloroplast precursor [Salmo salar]
Length = 138
Score = 151 bits (381), Expect = 1e-34
Identities = 69/92 (75%), Positives = 77/92 (83%)
Frame = -1
Query: 365 KTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVY 186
+T QP GP G F+ G DA GR KGKGVYQF +KYGANVDGYSPIY+PEEWS GGDVY
Sbjct: 46 QTAQPYGPGGGVDFKDGLDASGRVAKGKGVYQFANKYGANVDGYSPIYTPEEWSPGGDVY 105
Query: 185 VGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
VGGKTGL +WA+TL G+L+GGALLVYNTSALA
Sbjct: 106 VGGKTGLFLWAVTLAGILLGGALLVYNTSALA 137
>ref|XP_006836429.1| hypothetical protein AMTR_s00092p00162140 [Amborella trichopoda]
gi|548838947|gb|ERM99282.1| hypothetical protein
AMTR_s00092p00162140 [Amborella trichopoda]
Length = 141
Score = 150 bits (380), Expect = 1e-34
Identities = 77/131 (58%), Positives = 87/131 (66%), Gaps = 6/131 (4%)
Frame = -1
Query: 464 ITMAMASGAVLSSTKLGLPSLSAXXXXXXXXXX------KTDQPLGPSGEFSFRGGKDAG 303
+++ +S + S GLPSL+ KTD P GP G S + G DA
Sbjct: 10 LSLKPSSPLIAKSNVRGLPSLTTSSFSFKVQASSVKKKIKTDTPYGPGGGMSLKDGLDAS 69
Query: 302 GRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGG 123
GRK KGKGVYQFVDKYGANVDGYSPIY +WS GDVYVGG TGLLIWA+TL GVL GG
Sbjct: 70 GRKQKGKGVYQFVDKYGANVDGYSPIYDENDWSPSGDVYVGGSTGLLIWAVTLAGVLAGG 129
Query: 122 ALLVYNTSALA 90
ALLVYNTSAL+
Sbjct: 130 ALLVYNTSALS 140
>gb|EMT17346.1| Photosystem II 10 kDa polypeptide, chloroplastic [Aegilops
tauschii]
Length = 140
Score = 150 bits (380), Expect = 1e-34
Identities = 70/92 (76%), Positives = 76/92 (82%)
Frame = -1
Query: 365 KTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVY 186
+T QP GP G F+ G DA GR KGKGVYQF DKYGANVDGYSPIY+PEEWS GDVY
Sbjct: 48 QTAQPYGPGGGVEFKEGVDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVY 107
Query: 185 VGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
VGGKTGL +WAITL G+L+GGALLVYNTSALA
Sbjct: 108 VGGKTGLFLWAITLAGILLGGALLVYNTSALA 139
>gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 136
Score = 150 bits (379), Expect = 2e-34
Identities = 76/118 (64%), Positives = 85/118 (72%), Gaps = 2/118 (1%)
Frame = -1
Query: 437 VLSSTKLGLPSLS--AXXXXXXXXXXKTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFV 264
V S+ GLP+LS KTD P G G + R G DA GRKPKGKGVYQ+V
Sbjct: 18 VEKSSVRGLPTLSRRTFKIEASGVKIKTDTPYGTGGGMNLRDGLDASGRKPKGKGVYQYV 77
Query: 263 DKYGANVDGYSPIYSPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
DKYGANVDGYSPIY+ +EWS GDVY GGKTGLLIWA+TL G+L GGALLVY+TSALA
Sbjct: 78 DKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLAGILAGGALLVYSTSALA 135
>gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118489823|gb|ABK96711.1| unknown
[Populus trichocarpa x Populus deltoides]
Length = 137
Score = 150 bits (379), Expect = 2e-34
Identities = 76/119 (63%), Positives = 85/119 (71%), Gaps = 3/119 (2%)
Frame = -1
Query: 437 VLSSTKLGLPSLSAXXXXXXXXXXK---TDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQF 267
V S+ GLP+LS K TD P G G + R G DA GRKPKGKGVYQ+
Sbjct: 18 VEKSSVRGLPTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLRDGLDASGRKPKGKGVYQY 77
Query: 266 VDKYGANVDGYSPIYSPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
VDKYGANVDGYSPIY+ +EWS GDVY GGKTGLLIWA+TL G+L GGALLVY+TSALA
Sbjct: 78 VDKYGANVDGYSPIYNTDEWSPSGDVYAGGKTGLLIWAVTLAGILAGGALLVYSTSALA 136
>ref|NP_001275173.1| photosystem II 10 kDa polypeptide, chloroplastic [Solanum
tuberosum] gi|131399|sp|P06183.1|PSBR_SOLTU RecName:
Full=Photosystem II 10 kDa polypeptide, chloroplastic;
AltName: Full=Light-inducible tissue-specific ST-LS1
protein; Flags: Precursor gi|21489|emb|CAA28450.1|
ST-LS1 protein [Solanum tuberosum]
gi|413968448|gb|AFW90561.1| light inducible
tissue-specific ST-LS1 [Solanum tuberosum]
gi|413968538|gb|AFW90606.1| light inducible
tissue-specific ST-LS1 [Solanum tuberosum]
gi|418730663|gb|AFX66996.1| photosystem II 10 kDa
polypeptide [Solanum tuberosum]
Length = 138
Score = 150 bits (378), Expect = 2e-34
Identities = 75/114 (65%), Positives = 83/114 (72%), Gaps = 5/114 (4%)
Frame = -1
Query: 416 GLPSL-----SAXXXXXXXXXXKTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYG 252
GLPSL S KTD+P G +G + R G DA GRKPKGKGVYQ+VDKYG
Sbjct: 24 GLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKGVYQYVDKYG 83
Query: 251 ANVDGYSPIYSPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
ANVDGYSPIY+ +EWS GDVYVGG TGL IWA+TL G+L GGALLVYNTSALA
Sbjct: 84 ANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYNTSALA 137
>ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloroplastic [Solanum
lycopersicum] gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName:
Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor gi|1217642|emb|CAA65231.1| PSII
polypeptide [Solanum lycopersicum]
Length = 138
Score = 149 bits (377), Expect = 3e-34
Identities = 75/114 (65%), Positives = 83/114 (72%), Gaps = 5/114 (4%)
Frame = -1
Query: 416 GLPSL-----SAXXXXXXXXXXKTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYG 252
GLPSL S KTD+P G +G + R G DA GRKPKGKGVYQ+VDKYG
Sbjct: 24 GLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKGVYQYVDKYG 83
Query: 251 ANVDGYSPIYSPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
ANVDGYSPIY+ +EWS GDVYVGG TGL IWA+TL G+L GGALLVYNTSALA
Sbjct: 84 ANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTSALA 137
>emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum lycopersicum]
Length = 130
Score = 149 bits (377), Expect = 3e-34
Identities = 75/114 (65%), Positives = 83/114 (72%), Gaps = 5/114 (4%)
Frame = -1
Query: 416 GLPSL-----SAXXXXXXXXXXKTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYG 252
GLPSL S KTD+P G +G + R G DA GRKPKGKGVYQ+VDKYG
Sbjct: 16 GLPSLTRSSSSFKVVARGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKGVYQYVDKYG 75
Query: 251 ANVDGYSPIYSPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
ANVDGYSPIY+ +EWS GDVYVGG TGL IWA+TL G+L GGALLVYNTSALA
Sbjct: 76 ANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTSALA 129
>emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
Length = 138
Score = 149 bits (377), Expect = 3e-34
Identities = 69/92 (75%), Positives = 77/92 (83%)
Frame = -1
Query: 365 KTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVY 186
KTD+P G +G + R G DA GRKPKGKGVYQ+VDKYGANVDGYSPIY+ +EWS GDVY
Sbjct: 46 KTDKPYGINGSMALRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVY 105
Query: 185 VGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
VGG TGL IWA+TL G+L GGALLVYNTSALA
Sbjct: 106 VGGTTGLAIWAVTLVGILAGGALLVYNTSALA 137
>ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
gi|566154457|ref|XP_006370466.1| Photosystem II 10 kDa
polypeptide family protein [Populus trichocarpa]
gi|118487848|gb|ABK95747.1| unknown [Populus
trichocarpa] gi|550349659|gb|ERP67035.1| Photosystem II
10 kDa polypeptide family protein [Populus trichocarpa]
Length = 137
Score = 149 bits (377), Expect = 3e-34
Identities = 76/119 (63%), Positives = 85/119 (71%), Gaps = 3/119 (2%)
Frame = -1
Query: 437 VLSSTKLGLPSLSAXXXXXXXXXXK---TDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQF 267
V S+ GLP+LS K TD P G G + R G DA GRKPKGKGVYQ+
Sbjct: 18 VEKSSVRGLPTLSRRTFKIEASGVKKIKTDTPYGTGGGMNLRDGLDASGRKPKGKGVYQY 77
Query: 266 VDKYGANVDGYSPIYSPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGALLVYNTSALA 90
VDKYGANVDGYSPIY+ +EWS GDVY GGKTGLLIWA+TL G+L GGALLVY+TSALA
Sbjct: 78 VDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLAGILAGGALLVYSTSALA 136
>ref|XP_002317016.1| polypeptide precursor of photosystem II family protein [Populus
trichocarpa] gi|566195486|ref|XP_006377856.1|
hypothetical protein POPTR_0011s14550g [Populus
trichocarpa] gi|118483083|gb|ABK93451.1| unknown
[Populus trichocarpa] gi|222860081|gb|EEE97628.1|
polypeptide precursor of photosystem II family protein
[Populus trichocarpa] gi|550328392|gb|ERP55653.1|
hypothetical protein POPTR_0011s14550g [Populus
trichocarpa]
Length = 137
Score = 149 bits (377), Expect = 3e-34
Identities = 70/91 (76%), Positives = 76/91 (83%)
Frame = -1
Query: 365 KTDQPLGPSGEFSFRGGKDAGGRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVY 186
KTDQP G +G RGG DA GRK KGKGVYQFVDKYGANVDGYSPIY P++WS G+VY
Sbjct: 45 KTDQPYGINGGMDLRGGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDPKDWSPSGEVY 104
Query: 185 VGGKTGLLIWAITLTGVLIGGALLVYNTSAL 93
VGG TGLLIWA+TL G+L GGALLVYNTSAL
Sbjct: 105 VGGTTGLLIWAVTLAGLLAGGALLVYNTSAL 135
>gb|AGS13734.1| chloroplast photosystem II protein [Brassica rapa subsp. oleifera]
Length = 138
Score = 149 bits (376), Expect = 4e-34
Identities = 78/133 (58%), Positives = 89/133 (66%), Gaps = 3/133 (2%)
Frame = -1
Query: 479 VHIRAITMAMASGAVLSSTKLGLPSL---SAXXXXXXXXXXKTDQPLGPSGEFSFRGGKD 309
V + ++T+ A V + GLPSL S KTD+P G +G R G D
Sbjct: 5 VMLSSVTLKPAGFTVEKMSARGLPSLTRTSFKIVASGVKKIKTDKPFGVNGSMDLRDGVD 64
Query: 308 AGGRKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVYVGGKTGLLIWAITLTGVLI 129
A GRK KG GVY+FVDKYGANVDGYSPIY+ EEWS GGDVY GG TGL IWA+TL G+L
Sbjct: 65 ASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWSPGGDVYKGGVTGLAIWAVTLAGILA 124
Query: 128 GGALLVYNTSALA 90
GGALLVYNTSALA
Sbjct: 125 GGALLVYNTSALA 137
>sp|Q40070.1|PSBR_HORVU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor gi|1321868|emb|CAA66373.1| 10kD PSII
protein [Hordeum vulgare] gi|326521128|dbj|BAJ96767.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532058|dbj|BAK01405.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 138
Score = 149 bits (376), Expect = 4e-34
Identities = 76/130 (58%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Frame = -1
Query: 467 AITMAMASGAVLSSTKLG--LPSL--SAXXXXXXXXXXKTDQPLGPSGEFSFRGGKDAGG 300
++ + +S +L +KLG PS S +T QP GP G +F+ G DA G
Sbjct: 8 SLALKPSSSPLLQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVAFKEGVDASG 67
Query: 299 RKPKGKGVYQFVDKYGANVDGYSPIYSPEEWSAGGDVYVGGKTGLLIWAITLTGVLIGGA 120
R KGKGVYQF DKYGANVDGYSPIY+PEEWS GDVYVGGKTGL +WA+TL G+L+GGA
Sbjct: 68 RVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVTLAGILLGGA 127
Query: 119 LLVYNTSALA 90
LLVY+TSALA
Sbjct: 128 LLVYSTSALA 137