BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00000207
         (499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46434.1| unknown [Lotus japonicus]                               73   5e-11
ref|NP_001235479.1| uncharacterized protein LOC100500004 [Glycin...    73   5e-11
gb|ABK26111.1| unknown [Picea sitchensis] gi|116792769|gb|ABK264...    73   5e-11
gb|ABK22811.1| unknown [Picea sitchensis]                              73   5e-11
gb|ABK21316.1| unknown [Picea sitchensis] gi|116779793|gb|ABK214...    73   5e-11
ref|NP_001147391.1| photosystem II core complex proteins psbY [Z...    72   6e-11
ref|XP_004135291.1| PREDICTED: photosystem II core complex prote...    71   2e-10
ref|XP_004142959.1| PREDICTED: photosystem II core complex prote...    70   2e-10
gb|AFW74395.1| hypothetical protein ZEAMMB73_053443, partial [Ze...    70   4e-10
gb|ACN39867.1| unknown [Picea sitchensis]                              70   4e-10
ref|NP_001147385.1| photosystem II core complex proteins psbY [Z...    70   4e-10
gb|AFW61341.1| photosystem II core complex protein psbY [Zea mays]     69   5e-10
ref|NP_001240940.1| uncharacterized protein LOC100779397 [Glycin...    69   5e-10
ref|NP_001147739.1| photosystem II core complex proteins psbY [Z...    69   5e-10
ref|XP_004972988.1| PREDICTED: photosystem II core complex prote...    69   9e-10
ref|XP_002444967.1| hypothetical protein SORBIDRAFT_07g002060 [S...    69   9e-10
ref|XP_002515034.1| photosystem II core complex proteins psbY, c...    69   9e-10
ref|XP_003573314.1| PREDICTED: photosystem II core complex prote...    68   1e-09
ref|XP_003601864.1| Photosystem II core complex proteins psbY [M...    67   2e-09
gb|AFK43145.1| unknown [Medicago truncatula]                           67   2e-09

>gb|AFK46434.1| unknown [Lotus japonicus]
          Length = 205

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 42/84 (50%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSP--YAEDAKAQQA--LFDLAAEGSSDGRGSLIFLVL 170
           NRMR+ K V              S   +A +A A +   + D AA G SD RG L+  V+
Sbjct: 121 NRMRNTKGVIVGLGLGLGGLAAGSGMLWAPEASAGELGIIADAAAAGGSDNRGQLLLFVV 180

Query: 171 APAVGWVLFNILQPALNQLNRMRS 242
           APA+GWVLFNILQPALNQ+NRMRS
Sbjct: 181 APAIGWVLFNILQPALNQINRMRS 204



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = +3

Query: 123 AEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQLG 275
           AEG  D RG  + L L PA+ WVLFNILQPALNQ+NRMR+    IV + LG
Sbjct: 88  AEG--DNRGLALLLPLIPAIVWVLFNILQPALNQINRMRNTKGVIVGLGLG 136


>ref|NP_001235479.1| uncharacterized protein LOC100500004 [Glycine max]
           gi|255628451|gb|ACU14570.1| unknown [Glycine max]
          Length = 192

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 39/80 (48%), Positives = 48/80 (60%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAV 182
           NRMRS K V            V +P+A  A A +    +A   S+D RG L+  V+ PA+
Sbjct: 113 NRMRSTKGVIIGLGLGGLAGLVAAPHASAAAASEVAA-MAEAASNDNRGQLLLFVVTPAI 171

Query: 183 GWVLFNILQPALNQLNRMRS 242
            WVL+NILQPALNQLNRMRS
Sbjct: 172 AWVLYNILQPALNQLNRMRS 191



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/67 (53%), Positives = 43/67 (64%)
 Frame = +3

Query: 90  AKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQ 269
           A A Q + D+A     D RG  + L + PA+GWVLFNILQPALNQLNRMRS    I+ + 
Sbjct: 70  AFAVQQIADIA---EGDNRGLALLLPIIPAIGWVLFNILQPALNQLNRMRSTKGVIIGLG 126

Query: 270 LGPLPSL 290
           LG L  L
Sbjct: 127 LGGLAGL 133


>gb|ABK26111.1| unknown [Picea sitchensis] gi|116792769|gb|ABK26490.1| unknown
           [Picea sitchensis] gi|148906010|gb|ABR16165.1| unknown
           [Picea sitchensis] gi|148906227|gb|ABR16269.1| unknown
           [Picea sitchensis] gi|148907833|gb|ABR17041.1| unknown
           [Picea sitchensis] gi|148908345|gb|ABR17286.1| unknown
           [Picea sitchensis] gi|224285567|gb|ACN40502.1| unknown
           [Picea sitchensis]
          Length = 207

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/54 (62%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
 Frame = +3

Query: 84  EDAKAQQALFDLAAEGSS-DGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 242
           E+A A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 152 EEAHAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +3

Query: 84  EDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMR 239
           + A A Q + +LAA   SD RG+L+ L L PA+ WVL+NILQPALNQ+NRM+
Sbjct: 81  DSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQINRMK 129


>gb|ABK22811.1| unknown [Picea sitchensis]
          Length = 206

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/54 (62%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
 Frame = +3

Query: 84  EDAKAQQALFDLAAEGSS-DGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 242
           E+A A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 152 EEAHAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +3

Query: 84  EDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMR 239
           + A A Q + +LAA   SD RG+L+ L L PA+ WVL+NILQPALNQ+NRM+
Sbjct: 81  DSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQINRMK 129


>gb|ABK21316.1| unknown [Picea sitchensis] gi|116779793|gb|ABK21432.1| unknown
           [Picea sitchensis] gi|116780291|gb|ABK21621.1| unknown
           [Picea sitchensis] gi|116782013|gb|ABK22335.1| unknown
           [Picea sitchensis] gi|116782043|gb|ABK22345.1| unknown
           [Picea sitchensis] gi|116784459|gb|ABK23350.1| unknown
           [Picea sitchensis] gi|116791697|gb|ABK26075.1| unknown
           [Picea sitchensis] gi|116791715|gb|ABK26082.1| unknown
           [Picea sitchensis] gi|224285486|gb|ACN40464.1| unknown
           [Picea sitchensis] gi|224285621|gb|ACN40529.1| unknown
           [Picea sitchensis]
          Length = 206

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/54 (62%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
 Frame = +3

Query: 84  EDAKAQQALFDLAAEGSS-DGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 242
           E+A A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 152 EEAHAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +3

Query: 84  EDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMR 239
           + A A Q + +LAA   SD RG+L+ L L PA+ WVL+NILQPALNQ+NRM+
Sbjct: 81  DSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQINRMK 129


>ref|NP_001147391.1| photosystem II core complex proteins psbY [Zea mays]
           gi|195610958|gb|ACG27309.1| photosystem II core complex
           proteins psbY [Zea mays]
          Length = 176

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSPYAEDAKAQQALFDLAAEG-SSDGRGSLIFLVLAPA 179
           NRMRS+++V            + +P    A   Q L  +AA   + D RG L+ +V+APA
Sbjct: 95  NRMRSSQAVAAGLGLGAAAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAPA 154

Query: 180 VGWVLFNILQPALNQLNRMRSN 245
           +GWVLFNILQPALNQLNRMRS+
Sbjct: 155 IGWVLFNILQPALNQLNRMRSD 176



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/52 (63%), Positives = 40/52 (76%)
 Frame = +3

Query: 120 AAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQLG 275
           AA+   D RG L+ +V+APA+GWVL+NILQPALNQLNRMRS+  Q V   LG
Sbjct: 59  AADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSS--QAVAAGLG 108


>ref|XP_004135291.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Cucumis sativus]
          Length = 179

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 37/42 (88%)
 Frame = +3

Query: 117 LAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 242
           +AAE  SDGRG L+ +V+APA+ WVLFNILQPALNQLNRMRS
Sbjct: 137 MAAEAGSDGRGQLLLIVVAPAIAWVLFNILQPALNQLNRMRS 178



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/64 (56%), Positives = 41/64 (64%)
 Frame = +3

Query: 90  AKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQ 269
           A A Q + DLA     D RG  + L L PAV WVLFNILQPALNQ+NRMR+    IV + 
Sbjct: 65  ALAAQQIADLA---EGDNRGLALLLPLIPAVAWVLFNILQPALNQINRMRTEKAVIVGLG 121

Query: 270 LGPL 281
           LG L
Sbjct: 122 LGGL 125


>ref|XP_004142959.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Cucumis sativus]
           gi|449494514|ref|XP_004159566.1| PREDICTED: photosystem
           II core complex proteins psbY, chloroplastic-like
           [Cucumis sativus]
          Length = 253

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 42/80 (52%), Positives = 48/80 (60%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAV 182
           NRMRS K V             F  YA DA A +    +A   SSD RG L+  V+APA+
Sbjct: 175 NRMRSDKGVIIGLGLGGLTASGFM-YAPDASASEIAM-IADASSSDSRGQLLLFVVAPAI 232

Query: 183 GWVLFNILQPALNQLNRMRS 242
            WVL+NILQPALNQLNRMRS
Sbjct: 233 LWVLYNILQPALNQLNRMRS 252



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/67 (53%), Positives = 47/67 (70%)
 Frame = +3

Query: 81  AEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIV 260
           ++ A A Q + ++AA+G  D RG  + L L PAV WVLFNILQPALNQ+NRMRS+   I+
Sbjct: 128 SDPAFAAQQIAEIAADG--DNRGLALLLPLIPAVAWVLFNILQPALNQINRMRSDKGVII 185

Query: 261 EIQLGPL 281
            + LG L
Sbjct: 186 GLGLGGL 192


>gb|AFW74395.1| hypothetical protein ZEAMMB73_053443, partial [Zea mays]
          Length = 184

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFS--PYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAP 176
           NRMRS+++V              +  P A  A  Q      AA  + D RG L+ +V+AP
Sbjct: 102 NRMRSSQAVAAGLGLGAAAAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAP 161

Query: 177 AVGWVLFNILQPALNQLNRMRSN 245
           A+GWVLFNILQPALNQLNRMRS+
Sbjct: 162 AIGWVLFNILQPALNQLNRMRSD 184



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +3

Query: 105 ALFDLAA-EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQLG 275
           AL D+AA +   D RG L+ +V+APA+GWVL+NILQPALNQLNRMRS+  Q V   LG
Sbjct: 60  ALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSS--QAVAAGLG 115


>gb|ACN39867.1| unknown [Picea sitchensis]
          Length = 206

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 33/54 (61%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
 Frame = +3

Query: 84  EDAKAQQALFDLAAEGSS-DGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 242
           E+A A+Q +FDLAA+ ++ D R  L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 152 EEAHAEQLVFDLAAKAANNDNRRLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +3

Query: 84  EDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMR 239
           +   A Q + +LAA   SD RG+L+ L L PA+ WVL+NILQPALNQ+NRM+
Sbjct: 81  DSTAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQINRMK 129


>ref|NP_001147385.1| photosystem II core complex proteins psbY [Zea mays]
           gi|195610810|gb|ACG27235.1| photosystem II core complex
           proteins psbY [Zea mays] gi|413941745|gb|AFW74394.1|
           photosystem II core complex protein psbY [Zea mays]
          Length = 191

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFS--PYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAP 176
           NRMRS+++V              +  P A  A  Q      AA  + D RG L+ +V+AP
Sbjct: 109 NRMRSSQAVAAGLGLGAAAAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAP 168

Query: 177 AVGWVLFNILQPALNQLNRMRSN 245
           A+GWVLFNILQPALNQLNRMRS+
Sbjct: 169 AIGWVLFNILQPALNQLNRMRSD 191



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +3

Query: 105 ALFDLAA-EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQLG 275
           AL D+AA +   D RG L+ +V+APA+GWVL+NILQPALNQLNRMRS+  Q V   LG
Sbjct: 67  ALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSS--QAVAAGLG 122


>gb|AFW61341.1| photosystem II core complex protein psbY [Zea mays]
          Length = 196

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSPYAEDAKAQQALFDLAAEGSS-----DGRGSLIFLV 167
           NRMRS   V              +P A  A A Q L  LAA  ++     D RG L+ +V
Sbjct: 111 NRMRSQAVVAGLGLGAAAAGMAAAPEASAAAAAQDLAALAAAAAAAAPADDNRGLLLLIV 170

Query: 168 LAPAVGWVLFNILQPALNQLNRMRSN 245
           + PA+GWVLFNILQPALNQ+NRM+S+
Sbjct: 171 VTPAIGWVLFNILQPALNQINRMKSD 196



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
 Frame = +3

Query: 81  AEDAKAQQALFDLAA--EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 242
           ++ A A Q + D+AA  +  SD RG L+  V+APA+GWVL+NILQPALNQLNRMRS
Sbjct: 60  SDAALAAQRVADVAAAADSGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 115


>ref|NP_001240940.1| uncharacterized protein LOC100779397 [Glycine max]
           gi|255646582|gb|ACU23765.1| unknown [Glycine max]
          Length = 187

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/80 (47%), Positives = 47/80 (58%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAV 182
           NRMRS K V              +P+A  A ++      AA  +SD RG L+  V+ PA+
Sbjct: 113 NRMRSTKGVIIGLGLGGLAGLAAAPHAWAAASE------AAAAASDNRGQLLLFVVTPAI 166

Query: 183 GWVLFNILQPALNQLNRMRS 242
            WVL+NILQPALNQLNRMRS
Sbjct: 167 AWVLYNILQPALNQLNRMRS 186



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/67 (53%), Positives = 43/67 (64%)
 Frame = +3

Query: 90  AKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQ 269
           A A Q + D+A     D RG  + L + PA+GWVLFNILQPALNQLNRMRS    I+ + 
Sbjct: 70  AFAVQQIADIA---EGDNRGLALLLPIIPAIGWVLFNILQPALNQLNRMRSTKGVIIGLG 126

Query: 270 LGPLPSL 290
           LG L  L
Sbjct: 127 LGGLAGL 133


>ref|NP_001147739.1| photosystem II core complex proteins psbY [Zea mays]
           gi|195613400|gb|ACG28530.1| photosystem II core complex
           proteins psbY [Zea mays]
          Length = 196

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSPYAEDAKAQQALFDLAAEGSS-----DGRGSLIFLV 167
           NRMRS   V              +P A  A A Q L  LAA  ++     D RG L+ +V
Sbjct: 111 NRMRSQAVVAGLGLGAAAAGMAAAPEASAAAAAQDLAALAAAAAAAAPADDNRGLLLLIV 170

Query: 168 LAPAVGWVLFNILQPALNQLNRMRSN 245
           + PA+GWVLFNILQPALNQ+NRM+S+
Sbjct: 171 VTPAIGWVLFNILQPALNQINRMKSD 196



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
 Frame = +3

Query: 81  AEDAKAQQALFDLAA--EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 242
           ++ A A Q + D+AA  +  SD RG L+  V+APA+GWVL+NILQPALNQLNRMRS
Sbjct: 60  SDAALAAQRVADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 115


>ref|XP_004972988.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Setaria italica]
          Length = 197

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = +3

Query: 81  AEDAKAQQALFDLAA-EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 242
           ++ A A Q + D+AA +  SD RG L+  V+APA+GWVL+NILQPALNQLNRMRS
Sbjct: 64  SDAALAAQRVADVAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 118



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSPYAEDAKAQQALFDLAAEGSS---DGRGSLIFLVLA 173
           NRMRS   +              +   E + A Q L  LAA  ++   D RG L+ +V+A
Sbjct: 114 NRMRSQAVIAGVGLGAAATAAGMACAPEASAAVQDLAALAAAAAAPADDNRGLLLLIVVA 173

Query: 174 PAVGWVLFNILQPALNQLNRMRSN 245
           PA+GWVLFNILQPALNQLNRMRS+
Sbjct: 174 PAIGWVLFNILQPALNQLNRMRSD 197


>ref|XP_002444967.1| hypothetical protein SORBIDRAFT_07g002060 [Sorghum bicolor]
           gi|241941317|gb|EES14462.1| hypothetical protein
           SORBIDRAFT_07g002060 [Sorghum bicolor]
          Length = 203

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
 Frame = +3

Query: 90  AKAQQALFDLAA--EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 242
           A +  AL D+AA  +  SD RG L+  V+APA+GWVL+NILQPALNQLNRMRS
Sbjct: 72  ASSDAALADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 124



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/58 (62%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +3

Query: 75  PYAEDAKAQQALFDLAAEG-SSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 245
           P A  A + Q L  LAA   + D RG L+ +V+APA+GWVLFNILQPALNQLNRMRS+
Sbjct: 146 PEASAAASVQDLAALAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRSD 203


>ref|XP_002515034.1| photosystem II core complex proteins psbY, chloroplast precursor
           [Ricinus communis] gi|223546085|gb|EEF47588.1|
           photosystem II core complex proteins psbY, chloroplast
           precursor [Ricinus communis]
          Length = 195

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 37/80 (46%), Positives = 48/80 (60%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAV 182
           NRMR  K V             F   A +A A + +  + A+ +SD RG L+  V+APA+
Sbjct: 116 NRMRETKGVIIGLGLGGLAATGFMAAAPEASASENIA-MIADAASDNRGQLLLFVVAPAI 174

Query: 183 GWVLFNILQPALNQLNRMRS 242
            WVL+NILQPALNQ+NRMRS
Sbjct: 175 LWVLYNILQPALNQINRMRS 194



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/66 (46%), Positives = 42/66 (63%)
 Frame = +3

Query: 84  EDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVE 263
           + A A Q + ++A     D RG  + L + PA+GWVLFNIL+PALNQ+NRMR     I+ 
Sbjct: 71  DPAFAAQQIAEIA---EGDNRGLALLLPIIPALGWVLFNILRPALNQINRMRETKGVIIG 127

Query: 264 IQLGPL 281
           + LG L
Sbjct: 128 LGLGGL 133


>ref|XP_003573314.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Brachypodium distachyon]
          Length = 198

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/81 (45%), Positives = 46/81 (56%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAV 182
           N+MRS K++                 A  A  + A    AA  + D RG L+  V+APA+
Sbjct: 118 NKMRSEKALVAGLGLGAAMAAAAPERASAAAGEIAAMAAAAAPADDNRGLLLLFVVAPAL 177

Query: 183 GWVLFNILQPALNQLNRMRSN 245
           GWVLFNILQPALNQL +MRSN
Sbjct: 178 GWVLFNILQPALNQLEKMRSN 198



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = +3

Query: 81  AEDAKAQQALFDLAAEG-SSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQI 257
           ++ A A Q + D+AA   + D RG L+ +V++PA+ WVL+NILQPALNQLN+MRS    +
Sbjct: 68  SDAAMAAQRVADMAAAAPADDNRGLLLLIVVSPALAWVLYNILQPALNQLNKMRSEKALV 127

Query: 258 VEIQLG 275
             + LG
Sbjct: 128 AGLGLG 133


>ref|XP_003601864.1| Photosystem II core complex proteins psbY [Medicago truncatula]
           gi|355490912|gb|AES72115.1| Photosystem II core complex
           proteins psbY [Medicago truncatula]
          Length = 193

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/81 (46%), Positives = 50/81 (61%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAV 182
           NRMR+AK V                 +E + ++  L   AA GS D RG+L+  V+APA+
Sbjct: 114 NRMRNAKGVIVGLGLGLGGLAASGMVSEASASEIGLIADAAAGS-DNRGTLLLFVVAPAI 172

Query: 183 GWVLFNILQPALNQLNRMRSN 245
            WVL+NILQPALNQ+NRMRS+
Sbjct: 173 LWVLYNILQPALNQINRMRSD 193



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 36/70 (51%), Positives = 46/70 (65%)
 Frame = +3

Query: 66  VFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 245
           +FS  A  + A  A   +A     D RG+L+  V+APA+GWVLFNILQPALNQ+NRMR+ 
Sbjct: 61  IFSSLAT-SDAAFAAQQIAEIAEGDNRGTLLLFVVAPAIGWVLFNILQPALNQINRMRNA 119

Query: 246 *KQIVEIQLG 275
              IV + LG
Sbjct: 120 KGVIVGLGLG 129


>gb|AFK43145.1| unknown [Medicago truncatula]
          Length = 197

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/81 (46%), Positives = 50/81 (61%)
 Frame = +3

Query: 3   NRMRSAKSVXXXXXXXXXXXXVFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAV 182
           NRMR+AK V                 +E + ++  L   AA GS D RG+L+  V+APA+
Sbjct: 118 NRMRNAKGVIVGLGLGLGGLAASGMVSEASASEIGLIADAAAGS-DNRGTLLLFVVAPAI 176

Query: 183 GWVLFNILQPALNQLNRMRSN 245
            WVL+NILQPALNQ+NRMRS+
Sbjct: 177 LWVLYNILQPALNQINRMRSD 197



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 36/70 (51%), Positives = 46/70 (65%)
 Frame = +3

Query: 66  VFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 245
           +FS  A  + A  A   +A     D RG+L+  V+APA+GWVLFNILQPALNQ+NRMR+ 
Sbjct: 65  IFSSLAT-SDAAFAAQQIAEIAEGDNRGTLLLFVVAPAIGWVLFNILQPALNQINRMRNA 123

Query: 246 *KQIVEIQLG 275
              IV + LG
Sbjct: 124 KGVIVGLGLG 133