BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00000101
         (463 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25816.1| unknown [Picea sitchensis]                              71   2e-10
gb|ESW21069.1| hypothetical protein PHAVU_005G039000g [Phaseolus...    70   2e-10
ref|XP_006585341.1| PREDICTED: 30S ribosomal protein 2, chloropl...    69   8e-10
ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloropl...    69   8e-10
ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloropl...    69   8e-10
gb|AHA84212.1| chloroplast 30S ribosomal protein 2 [Phaseolus vu...    67   9e-10
gb|EOX96750.1| RNA-binding family protein [Theobroma cacao]            68   1e-09
ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloropl...    68   1e-09
ref|XP_006482842.1| PREDICTED: 30S ribosomal protein 2, chloropl...    67   1e-09
ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ri...    66   2e-09
gb|EMJ20051.1| hypothetical protein PRUPE_ppa010401mg [Prunus pe...    67   3e-09
ref|XP_006439065.1| hypothetical protein CICLE_v10032498mg [Citr...    65   7e-09
gb|EXB59937.1| 30S ribosomal protein 2 [Morus notabilis]               65   7e-09
ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloropl...    64   2e-08
ref|XP_006854941.1| hypothetical protein AMTR_s00052p00146290 [A...    64   3e-08
ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula] ...    61   6e-08
ref|XP_004306507.1| PREDICTED: 30S ribosomal protein 2, chloropl...    62   6e-08
ref|XP_002314019.1| hypothetical protein POPTR_0009s07030g [Popu...    62   6e-08
gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]       62   8e-08
dbj|BAH19693.1| AT3G52150 [Arabidopsis thaliana]                       60   1e-07

>gb|ABK25816.1| unknown [Picea sitchensis]
          Length = 248

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
 Frame = +3

Query: 3   DLSGLKAQTEEP-FIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           D+SGL   TEE  FIDSP+KVYVGN+++ VTTETLKK F+EKG++L AKV R
Sbjct: 154 DVSGLNRLTEEAEFIDSPYKVYVGNLAKAVTTETLKKKFAEKGNVLDAKVTR 205


>gb|ESW21069.1| hypothetical protein PHAVU_005G039000g [Phaseolus vulgaris]
          Length = 241

 Score = 69.7 bits (169), Expect(2) = 2e-10
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = +3

Query: 15  LKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           L    E  FIDSPHKVYVGN+++TVTT+TLKK FSEKG +LSAKV R
Sbjct: 152 LSQSEESQFIDSPHKVYVGNLAKTVTTDTLKKFFSEKGKVLSAKVSR 198



 Score = 21.2 bits (43), Expect(2) = 2e-10
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +2

Query: 173 LEGKKIRVSKA 205
           LEG+K+RV+KA
Sbjct: 231 LEGQKVRVNKA 241


>ref|XP_006585341.1| PREDICTED: 30S ribosomal protein 2, chloroplastic isoform X2
           [Glycine max]
          Length = 302

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           DL  L+A+  E FIDSPHKVYVGN+++TVTT+TLK  FSEKG +LSAKV R
Sbjct: 210 DLPLLQAEESE-FIDSPHKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSR 259


>ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic isoform X1
           [Glycine max]
          Length = 246

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           DL  L+A+  E FIDSPHKVYVGN+++TVTT+TLK  FSEKG +LSAKV R
Sbjct: 154 DLPLLQAEESE-FIDSPHKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSR 203


>ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Glycine max]
          Length = 246

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           DL  L+A+  E FIDSPHKVYVGN+++TVTT+TLK  FSEKG +LSAKV R
Sbjct: 154 DLPLLQAEESE-FIDSPHKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSR 203


>gb|AHA84212.1| chloroplast 30S ribosomal protein 2 [Phaseolus vulgaris]
          Length = 246

 Score = 67.4 bits (163), Expect(2) = 9e-10
 Identities = 32/47 (68%), Positives = 37/47 (78%)
 Frame = +3

Query: 15  LKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           L    E  FIDSPHKVYVGN+++TVTT+TLKK F EKG +LSAKV R
Sbjct: 157 LSQSEESQFIDSPHKVYVGNLAKTVTTDTLKKFFFEKGKVLSAKVSR 203



 Score = 21.2 bits (43), Expect(2) = 9e-10
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +2

Query: 173 LEGKKIRVSKA 205
           LEG+K+RV+KA
Sbjct: 236 LEGQKVRVNKA 246


>gb|EOX96750.1| RNA-binding family protein [Theobroma cacao]
          Length = 253

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/51 (64%), Positives = 43/51 (84%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           DLS L+ +  + F+DSPHKVYVGN+++T+TT+TLKK FSEKG +LSAKV R
Sbjct: 161 DLSLLQDEDSQ-FVDSPHKVYVGNLAKTITTDTLKKFFSEKGKVLSAKVSR 210


>ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
           sativus] gi|449489082|ref|XP_004158209.1| PREDICTED: 30S
           ribosomal protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 251

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           D+S L+A+ E  FIDSP+KVYVGNIS TV+TETLK  FSEKG +LSAKV R
Sbjct: 159 DMSFLQAE-ESQFIDSPYKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSR 208


>ref|XP_006482842.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Citrus
           sinensis]
          Length = 258

 Score = 67.4 bits (163), Expect(2) = 1e-09
 Identities = 33/51 (64%), Positives = 44/51 (86%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           DLS L+A+ +  F+DSP+KVYVGN+++TVT+E LKK FSEKG +LSAKV+R
Sbjct: 166 DLSLLQAE-DSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLR 215



 Score = 20.4 bits (41), Expect(2) = 1e-09
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +2

Query: 173 LEGKKIRVSKA 205
           LEG++IRV+KA
Sbjct: 248 LEGQRIRVNKA 258


>ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223547691|gb|EEF49184.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 256

 Score = 65.9 bits (159), Expect(2) = 2e-09
 Identities = 33/51 (64%), Positives = 41/51 (80%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           DLS L+ + E  F+DSPHKVYVGN+++TVT+E LK  FSEKG +LSAKV R
Sbjct: 164 DLSFLQLE-ESQFVDSPHKVYVGNLAKTVTSEILKNFFSEKGKVLSAKVSR 213



 Score = 21.6 bits (44), Expect(2) = 2e-09
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +2

Query: 173 LEGKKIRVSKA 205
           LEG+KIRV+KA
Sbjct: 246 LEGQKIRVNKA 256


>gb|EMJ20051.1| hypothetical protein PRUPE_ppa010401mg [Prunus persica]
          Length = 251

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/51 (66%), Positives = 41/51 (80%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           D+S L+A+ E  FIDSPHKVYVGN+ + VTT+TLK  FSEKG +LSAKV R
Sbjct: 159 DVSLLQAE-ESQFIDSPHKVYVGNLGKEVTTDTLKTLFSEKGKVLSAKVSR 208


>ref|XP_006439065.1| hypothetical protein CICLE_v10032498mg [Citrus clementina]
           gi|557541261|gb|ESR52305.1| hypothetical protein
           CICLE_v10032498mg [Citrus clementina]
          Length = 258

 Score = 65.1 bits (157), Expect(2) = 7e-09
 Identities = 32/51 (62%), Positives = 43/51 (84%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           DLS L+A+ +  F+DSP+KVYVGN+++TVT+E LKK FSEKG +L+AKV R
Sbjct: 166 DLSLLQAE-DSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLNAKVSR 215



 Score = 20.4 bits (41), Expect(2) = 7e-09
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +2

Query: 173 LEGKKIRVSKA 205
           LEG++IRV+KA
Sbjct: 248 LEGQRIRVNKA 258


>gb|EXB59937.1| 30S ribosomal protein 2 [Morus notabilis]
          Length = 267

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
 Frame = +3

Query: 6   LSG--LKAQTEEP-FIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           LSG  L  Q EE  F+DSPHKVYVGN+++ VTTETLK  FSEKG++L AKV R
Sbjct: 157 LSGVDLSLQAEESQFVDSPHKVYVGNLAKNVTTETLKNFFSEKGNVLGAKVSR 209


>ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
           gi|297736206|emb|CBI24844.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEK-GSILSAKVVR 155
           D+S L+A+ E  FIDSPHKVYVGN++RTVTT+TL + FSEK G +LSAKV R
Sbjct: 154 DMSLLQAE-ESQFIDSPHKVYVGNLARTVTTDTLTQFFSEKGGKVLSAKVSR 204


>ref|XP_006854941.1| hypothetical protein AMTR_s00052p00146290 [Amborella trichopoda]
           gi|548858666|gb|ERN16408.1| hypothetical protein
           AMTR_s00052p00146290 [Amborella trichopoda]
          Length = 115

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/51 (62%), Positives = 40/51 (78%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           D S L+A+ E  F+D PHKVYVGN+++TVTT+ L K FSEKG +LSAKV R
Sbjct: 21  DKSKLQAE-ESNFVDRPHKVYVGNLAKTVTTDMLSKFFSEKGKVLSAKVRR 70


>ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula]
           gi|355488100|gb|AES69303.1| 30S ribosomal protein
           [Medicago truncatula]
          Length = 235

 Score = 60.8 bits (146), Expect(2) = 6e-08
 Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +3

Query: 12  GLKAQT-EEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           GL  Q  E  F+DSP+KVYVGN+++ VT+++LKK FSEKG+ LSAKV R
Sbjct: 144 GLPVQAGESTFVDSPYKVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSR 192



 Score = 21.6 bits (44), Expect(2) = 6e-08
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +2

Query: 173 LEGKKIRVSKA 205
           LEG+KIRV+KA
Sbjct: 225 LEGQKIRVNKA 235


>ref|XP_004306507.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 242

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           DLS ++A+ E  F+DS HKVYVGN+++ VTTETL+K FSEK  +LSAKV R
Sbjct: 150 DLSLVQAE-ESQFVDSHHKVYVGNLAKGVTTETLQKLFSEKAKVLSAKVSR 199


>ref|XP_002314019.1| hypothetical protein POPTR_0009s07030g [Populus trichocarpa]
           gi|222850427|gb|EEE87974.1| hypothetical protein
           POPTR_0009s07030g [Populus trichocarpa]
          Length = 255

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/51 (58%), Positives = 41/51 (80%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           DL  L++  E  F+DSP+KVYVGN+++TV T+TLK  FS+KG++LSAKV R
Sbjct: 163 DLPSLQSD-ESQFVDSPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSR 212


>gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/51 (58%), Positives = 41/51 (80%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           DL  L++  E  F+DSP+KVYVGN+++TV T+TLK  FS+KG++LSAKV R
Sbjct: 163 DLPSLQSD-ETQFVDSPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSR 212


>dbj|BAH19693.1| AT3G52150 [Arabidopsis thaliana]
          Length = 253

 Score = 60.1 bits (144), Expect(2) = 1e-07
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = +3

Query: 3   DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVR 155
           DLS L+++ +  F+DSP+KVYVGN+++TVT E L+  FSEKG ++SAKV R
Sbjct: 161 DLSVLQSE-DSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSR 210



 Score = 21.6 bits (44), Expect(2) = 1e-07
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +2

Query: 173 LEGKKIRVSKA 205
           LEG+KIRV+KA
Sbjct: 243 LEGQKIRVNKA 253