BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00000099
         (1244 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26083.1| unknown [Picea sitchensis]                             206   1e-50
gb|ABK21876.1| unknown [Picea sitchensis] gi|116782420|gb|ABK224...   206   1e-50
gb|ABK22359.1| unknown [Picea sitchensis]                             206   1e-50
gb|ABK21852.1| unknown [Picea sitchensis]                             206   1e-50
gb|ACN40169.1| unknown [Picea sitchensis]                             204   6e-50
gb|ABK21259.1| unknown [Picea sitchensis] gi|116779401|gb|ABK212...   204   6e-50
gb|ABK21447.1| unknown [Picea sitchensis] gi|116780594|gb|ABK217...   204   8e-50
gb|ABK21690.1| unknown [Picea sitchensis]                             204   8e-50
gb|ACN40281.1| unknown [Picea sitchensis]                             203   1e-49
gb|ABK21347.1| unknown [Picea sitchensis] gi|116780861|gb|ABK218...   203   1e-49
ref|XP_002888576.1| ribulose bisphosphate carboxylase small chai...   202   2e-49
ref|XP_006405770.1| hypothetical protein EUTSA_v10027955mg [Eutr...   201   5e-49
gb|ACN40080.1| unknown [Picea sitchensis]                             201   5e-49
ref|XP_006302885.1| hypothetical protein CARUB_v10021016mg [Caps...   201   7e-49
sp|P05346.2|RBS1_BRANA RecName: Full=Ribulose bisphosphate carbo...   201   7e-49
ref|NP_176880.1| ribulose bisphosphate carboxylase small chain 1...   200   9e-49
ref|NP_198659.1| ribulose bisphosphate carboxylase small chain 1...   200   9e-49
emb|CAA30290.1| rubisco ssu precursor [Brassica napus]                200   9e-49
ref|XP_002868776.1| ribulose bisphosphate carboxylase [Arabidops...   200   9e-49
emb|CAA32702.1| ribulose bisphosphate carboxylase [Arabidopsis t...   200   1e-48

>gb|ABK26083.1| unknown [Picea sitchensis]
          Length = 159

 Score =  206 bits (525), Expect = 1e-50
 Identities = 100/165 (60%), Positives = 116/165 (70%), Gaps = 1/165 (0%)
 Frame = -2

Query: 973 LSSPAMGMSAVVAPAKTSLMRPLELSKAPSSVAKGNKKS-ASTTKAMLVWPNKGKIKFET 797
           ++S  M +S+  A A  +         AP   + GN  S     + M VWP     KFET
Sbjct: 1   MASSIMALSSTAAVAAVA---------APPKTSNGNGSSNGGRVRCMQVWPPYNNPKFET 51

Query: 796 LSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGATPGYYDGRYWTMWKLPMF 617
           LSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G I RKYG+TPGYYDGRYW MWKLPMF
Sbjct: 52  LSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGIIKRKYGSTPGYYDGRYWVMWKLPMF 111

Query: 616 GCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 482
           GC +++ VL E+ E  K YPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 112 GCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 156


>gb|ABK21876.1| unknown [Picea sitchensis] gi|116782420|gb|ABK22499.1| unknown
           [Picea sitchensis] gi|116784603|gb|ABK23405.1| unknown
           [Picea sitchensis] gi|116793621|gb|ABK26814.1| unknown
           [Picea sitchensis] gi|116793637|gb|ABK26822.1| unknown
           [Picea sitchensis] gi|116794195|gb|ABK27041.1| unknown
           [Picea sitchensis] gi|148907673|gb|ABR16965.1| unknown
           [Picea sitchensis] gi|224285721|gb|ACN40576.1| unknown
           [Picea sitchensis]
          Length = 193

 Score =  206 bits (525), Expect = 1e-50
 Identities = 102/186 (54%), Positives = 120/186 (64%), Gaps = 22/186 (11%)
 Frame = -2

Query: 973 LSSPAMGMSAVVAPAKTS----------------------LMRPLELSKAPSSVAKGNKK 860
           + S A  M+AV AP KTS                          +++S A +   +    
Sbjct: 5   IMSSAAAMAAVAAPPKTSNGNGSSNGNVVSAFTGLKSTAQFPSSMKISNAGAEWERKTTS 64

Query: 859 SASTTKAMLVWPNKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRK 680
           +    + M VWP     KFETLSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G I RK
Sbjct: 65  NGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGIIKRK 124

Query: 679 YGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCIS 500
           YG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFDN RQVQCIS
Sbjct: 125 YGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCIS 184

Query: 499 FIVHKP 482
           FIVHKP
Sbjct: 185 FIVHKP 190


>gb|ABK22359.1| unknown [Picea sitchensis]
          Length = 193

 Score =  206 bits (525), Expect = 1e-50
 Identities = 102/186 (54%), Positives = 120/186 (64%), Gaps = 22/186 (11%)
 Frame = -2

Query: 973 LSSPAMGMSAVVAPAKTS----------------------LMRPLELSKAPSSVAKGNKK 860
           + S A  M+AV AP KTS                          +++S A +   +    
Sbjct: 5   IMSSAAAMAAVAAPPKTSNGSGSSNGNVVSAFTGLKSTAQFPSSMKISNAGAEWERKTTS 64

Query: 859 SASTTKAMLVWPNKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRK 680
           +    + M VWP     KFETLSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G I RK
Sbjct: 65  NGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGIIKRK 124

Query: 679 YGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCIS 500
           YG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFDN RQVQCIS
Sbjct: 125 YGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCIS 184

Query: 499 FIVHKP 482
           FIVHKP
Sbjct: 185 FIVHKP 190


>gb|ABK21852.1| unknown [Picea sitchensis]
          Length = 193

 Score =  206 bits (525), Expect = 1e-50
 Identities = 102/186 (54%), Positives = 120/186 (64%), Gaps = 22/186 (11%)
 Frame = -2

Query: 973 LSSPAMGMSAVVAPAKTS----------------------LMRPLELSKAPSSVAKGNKK 860
           + S A  M+AV AP KTS                          +++S A +   +    
Sbjct: 5   IMSSAAAMAAVAAPPKTSNGNGSSNGNVVAAFTGLKSTAQFPSSMKISNAGAEWERKTTS 64

Query: 859 SASTTKAMLVWPNKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRK 680
           +    + M VWP     KFETLSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G I RK
Sbjct: 65  NGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGIIKRK 124

Query: 679 YGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCIS 500
           YG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFDN RQVQCIS
Sbjct: 125 YGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCIS 184

Query: 499 FIVHKP 482
           FIVHKP
Sbjct: 185 FIVHKP 190


>gb|ACN40169.1| unknown [Picea sitchensis]
          Length = 194

 Score =  204 bits (519), Expect = 6e-50
 Identities = 106/187 (56%), Positives = 123/187 (65%), Gaps = 23/187 (12%)
 Frame = -2

Query: 973 LSSPAMGMSAVVAPAKTSLMRPLELS--------------KAPSSVAKGN------KKSA 854
           + S A  M+AV AP KTS       S              + PSS+   N      +K+ 
Sbjct: 5   IMSSAAAMAAVAAPLKTSNGNGSSSSDNVVSAFTGLKSTAQFPSSMKTNNAGAEWERKTT 64

Query: 853 ST---TKAMLVWPNKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISR 683
           S     + M VWP     KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I R
Sbjct: 65  SNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKR 124

Query: 682 KYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCI 503
           KYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFDN RQVQCI
Sbjct: 125 KYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCI 184

Query: 502 SFIVHKP 482
           SFIVHKP
Sbjct: 185 SFIVHKP 191


>gb|ABK21259.1| unknown [Picea sitchensis] gi|116779401|gb|ABK21267.1| unknown
           [Picea sitchensis] gi|116779440|gb|ABK21283.1| unknown
           [Picea sitchensis] gi|116781990|gb|ABK22328.1| unknown
           [Picea sitchensis] gi|116782020|gb|ABK22337.1| unknown
           [Picea sitchensis] gi|116782035|gb|ABK22342.1| unknown
           [Picea sitchensis] gi|116784457|gb|ABK23349.1| unknown
           [Picea sitchensis] gi|116785630|gb|ABK23799.1| unknown
           [Picea sitchensis] gi|116786299|gb|ABK24056.1| unknown
           [Picea sitchensis] gi|116791702|gb|ABK26077.1| unknown
           [Picea sitchensis] gi|116792861|gb|ABK26530.1| unknown
           [Picea sitchensis] gi|148905732|gb|ABR16030.1| unknown
           [Picea sitchensis] gi|224284032|gb|ACN39754.1| unknown
           [Picea sitchensis] gi|224284134|gb|ACN39804.1| unknown
           [Picea sitchensis] gi|224284171|gb|ACN39822.1| unknown
           [Picea sitchensis] gi|224284301|gb|ACN39886.1| unknown
           [Picea sitchensis] gi|224284342|gb|ACN39906.1| unknown
           [Picea sitchensis] gi|224284389|gb|ACN39929.1| unknown
           [Picea sitchensis] gi|224284796|gb|ACN40128.1| unknown
           [Picea sitchensis] gi|224284941|gb|ACN40200.1| unknown
           [Picea sitchensis] gi|224284998|gb|ACN40228.1| unknown
           [Picea sitchensis] gi|224285010|gb|ACN40234.1| unknown
           [Picea sitchensis] gi|224285109|gb|ACN40282.1| unknown
           [Picea sitchensis] gi|224285123|gb|ACN40289.1| unknown
           [Picea sitchensis] gi|224285656|gb|ACN40544.1| unknown
           [Picea sitchensis] gi|224285893|gb|ACN40660.1| unknown
           [Picea sitchensis]
          Length = 194

 Score =  204 bits (519), Expect = 6e-50
 Identities = 106/187 (56%), Positives = 123/187 (65%), Gaps = 23/187 (12%)
 Frame = -2

Query: 973 LSSPAMGMSAVVAPAKTSLMRPLELS--------------KAPSSVAKGN------KKSA 854
           + S A  M+AV AP KTS       S              + PSS+   N      +K+ 
Sbjct: 5   IMSSAAAMAAVAAPLKTSNGNGSSSSGNVVSAFTGLKSTAQFPSSMKTNNAGAEWERKTT 64

Query: 853 ST---TKAMLVWPNKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISR 683
           S     + M VWP     KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I R
Sbjct: 65  SNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKR 124

Query: 682 KYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCI 503
           KYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFDN RQVQCI
Sbjct: 125 KYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCI 184

Query: 502 SFIVHKP 482
           SFIVHKP
Sbjct: 185 SFIVHKP 191


>gb|ABK21447.1| unknown [Picea sitchensis] gi|116780594|gb|ABK21733.1| unknown
           [Picea sitchensis] gi|116782047|gb|ABK22347.1| unknown
           [Picea sitchensis] gi|116783228|gb|ABK22845.1| unknown
           [Picea sitchensis] gi|116785645|gb|ABK23805.1| unknown
           [Picea sitchensis] gi|116785985|gb|ABK23931.1| unknown
           [Picea sitchensis] gi|116786044|gb|ABK23949.1| unknown
           [Picea sitchensis] gi|116790039|gb|ABK25479.1| unknown
           [Picea sitchensis] gi|116793644|gb|ABK26825.1| unknown
           [Picea sitchensis] gi|224284814|gb|ACN40137.1| unknown
           [Picea sitchensis] gi|224285468|gb|ACN40456.1| unknown
           [Picea sitchensis] gi|224285619|gb|ACN40528.1| unknown
           [Picea sitchensis] gi|224285683|gb|ACN40557.1| unknown
           [Picea sitchensis]
          Length = 194

 Score =  204 bits (518), Expect = 8e-50
 Identities = 106/187 (56%), Positives = 123/187 (65%), Gaps = 23/187 (12%)
 Frame = -2

Query: 973 LSSPAMGMSAVVAPAKTSLMRPLELS--------------KAPSSVAKGN------KKSA 854
           + S A  M+AV AP KTS       S              + PSS+   N      +K+ 
Sbjct: 5   IMSSAAAMAAVAAPLKTSNGNGSSSSGNVVSAFTGLKSTAQFPSSMKTNNAGAEWEQKTT 64

Query: 853 ST---TKAMLVWPNKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISR 683
           S     + M VWP     KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I R
Sbjct: 65  SNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKR 124

Query: 682 KYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCI 503
           KYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFDN RQVQCI
Sbjct: 125 KYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCI 184

Query: 502 SFIVHKP 482
           SFIVHKP
Sbjct: 185 SFIVHKP 191


>gb|ABK21690.1| unknown [Picea sitchensis]
          Length = 194

 Score =  204 bits (518), Expect = 8e-50
 Identities = 106/187 (56%), Positives = 123/187 (65%), Gaps = 23/187 (12%)
 Frame = -2

Query: 973 LSSPAMGMSAVVAPAKTSLMRPLELS--------------KAPSSVAKGN------KKSA 854
           + S A  M+AV AP KTS       S              + PSS+   N      +K+ 
Sbjct: 5   IMSSAAAMAAVAAPLKTSNGNGSSSSGNVVSAFTGLKSTAQFPSSMKTNNAGAELEQKTT 64

Query: 853 ST---TKAMLVWPNKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISR 683
           S     + M VWP     KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I R
Sbjct: 65  SNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKR 124

Query: 682 KYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCI 503
           KYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFDN RQVQCI
Sbjct: 125 KYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCI 184

Query: 502 SFIVHKP 482
           SFIVHKP
Sbjct: 185 SFIVHKP 191


>gb|ACN40281.1| unknown [Picea sitchensis]
          Length = 194

 Score =  203 bits (517), Expect = 1e-49
 Identities = 106/187 (56%), Positives = 123/187 (65%), Gaps = 23/187 (12%)
 Frame = -2

Query: 973 LSSPAMGMSAVVAPAKTSLMRPLELS--------------KAPSSVAKGN------KKSA 854
           + S A  M+AV AP KTS       S              + PSS+   N      +K+ 
Sbjct: 5   IMSSAAAMAAVAAPLKTSNGNGSSSSGNVVSAFTGLKSTAQFPSSMKTNNAGAEWERKTT 64

Query: 853 ST---TKAMLVWPNKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISR 683
           S     + M VWP     KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I R
Sbjct: 65  SNGGRVRYMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKR 124

Query: 682 KYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCI 503
           KYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFDN RQVQCI
Sbjct: 125 KYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCI 184

Query: 502 SFIVHKP 482
           SFIVHKP
Sbjct: 185 SFIVHKP 191


>gb|ABK21347.1| unknown [Picea sitchensis] gi|116780861|gb|ABK21851.1| unknown
           [Picea sitchensis] gi|148905962|gb|ABR16142.1| unknown
           [Picea sitchensis] gi|224284092|gb|ACN39783.1| unknown
           [Picea sitchensis] gi|224284864|gb|ACN40162.1| unknown
           [Picea sitchensis] gi|224285028|gb|ACN40243.1| unknown
           [Picea sitchensis]
          Length = 195

 Score =  203 bits (517), Expect = 1e-49
 Identities = 92/142 (64%), Positives = 108/142 (76%)
 Frame = -2

Query: 907 LELSKAPSSVAKGNKKSASTTKAMLVWPNKGKIKFETLSYLPPLTQEQLSKEIDYLLRNK 728
           +++S A +   +    +    + M VWP     KFETLSYLP LTQEQL KE++YLLRNK
Sbjct: 51  MKISNAGAEWERKTTSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNK 110

Query: 727 WVPCLEFDEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAF 548
           WVPCLEFDE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF
Sbjct: 111 WVPCLEFDEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAF 170

Query: 547 VRCIGFDNNRQVQCISFIVHKP 482
           +R IGFDN RQVQCISFIVHKP
Sbjct: 171 IRVIGFDNVRQVQCISFIVHKP 192


>ref|XP_002888576.1| ribulose bisphosphate carboxylase small chain 1A [Arabidopsis
           lyrata subsp. lyrata] gi|297334417|gb|EFH64835.1|
           ribulose bisphosphate carboxylase small chain 1A
           [Arabidopsis lyrata subsp. lyrata]
          Length = 180

 Score =  202 bits (514), Expect = 2e-49
 Identities = 99/175 (56%), Positives = 125/175 (71%), Gaps = 10/175 (5%)
 Frame = -2

Query: 976 LLSSPAMGMSAVVAPAKTSLMRP---LELSKAPSSVAKGNKKSASTTK------AMLVWP 824
           + SS     + V +PA+ +++ P   L+ S A  +  K N    S T        M VWP
Sbjct: 1   MASSMLSSATMVASPAQATMVAPFTGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60

Query: 823 NKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGR 647
             GK KFETLSYLP LT  +L+KE+DYLLRNKW+PC+EF+ E G + R++G +PGYYDGR
Sbjct: 61  PVGKKKFETLSYLPDLTDSELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNSPGYYDGR 120

Query: 646 YWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 482
           YWTMWKLP+FGC DSA VL+E+EE KKEYP+AF+R IGFDN+RQVQCISFI +KP
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPEAFIRIIGFDNSRQVQCISFIAYKP 175


>ref|XP_006405770.1| hypothetical protein EUTSA_v10027955mg [Eutrema salsugineum]
           gi|557106908|gb|ESQ47223.1| hypothetical protein
           EUTSA_v10027955mg [Eutrema salsugineum]
          Length = 181

 Score =  201 bits (511), Expect = 5e-49
 Identities = 95/175 (54%), Positives = 124/175 (70%), Gaps = 10/175 (5%)
 Frame = -2

Query: 976 LLSSPAMGMSAVVAPAKTSLMRPLELSKAPSSVAKGNKKSASTTK---------AMLVWP 824
           + SS     + V +PA+ +++ P    K+ ++     K +   T           M VWP
Sbjct: 1   MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNTDITSIASNGGRVSCMKVWP 60

Query: 823 NKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGR 647
             GK KFETLSYLP LT+ +L+KE+DYLLRNKW+PC+EF+ E G + R++G+TPGYYDGR
Sbjct: 61  PIGKKKFETLSYLPDLTEVELAKEVDYLLRNKWIPCVEFELENGFVHREHGSTPGYYDGR 120

Query: 646 YWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 482
           YWTMWKLP+FGC DSA VL+E++E KKEYP+AF+R IGFDN RQVQCISFI +KP
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPQAFIRIIGFDNTRQVQCISFIAYKP 175


>gb|ACN40080.1| unknown [Picea sitchensis]
          Length = 183

 Score =  201 bits (511), Expect = 5e-49
 Identities = 104/180 (57%), Positives = 120/180 (66%), Gaps = 23/180 (12%)
 Frame = -2

Query: 952 MSAVVAPAKTSLMRPLELS--------------KAPSSVAKGN------KKSAST---TK 842
           M+AV AP KTS       S              + PSS+   N      +K+ S     +
Sbjct: 1   MAAVAAPLKTSNGNGSSSSGNVVSAFTGLKSTAQFPSSMKTNNAGAEWEQKTTSNGGRVR 60

Query: 841 AMLVWPNKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGATPG 662
            M VWP     KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+TPG
Sbjct: 61  CMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGSTPG 120

Query: 661 YYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 482
           YYDGRYW MWKLPMFGC +++ VL E+ E  K YPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 121 YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 180


>ref|XP_006302885.1| hypothetical protein CARUB_v10021016mg [Capsella rubella]
           gi|482571595|gb|EOA35783.1| hypothetical protein
           CARUB_v10021016mg [Capsella rubella]
          Length = 181

 Score =  201 bits (510), Expect = 7e-49
 Identities = 99/175 (56%), Positives = 123/175 (70%), Gaps = 10/175 (5%)
 Frame = -2

Query: 976 LLSSPAMGMSAVVAPAKTSLMRP---LELSKAPSSVAKGNKKSASTTK------AMLVWP 824
           + SS     + V +PA+ +++ P   L+ S A  S  K N    S T        M VWP
Sbjct: 1   MASSMLSSATMVASPAQATMVAPFTGLKSSAAFPSTRKANNDITSITSNGGRVSCMKVWP 60

Query: 823 NKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGR 647
             GK KFETLSYLP L++ +L KE+DYLLRNKW+PC+EF+ E G + R++G TPGYYDGR
Sbjct: 61  PIGKKKFETLSYLPDLSEVELGKEVDYLLRNKWIPCVEFELENGFVHREHGNTPGYYDGR 120

Query: 646 YWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 482
           YWTMWKLP+FGC DSA VL+E+ E KKEYP+AF+R IGFDN RQVQCISFI +KP
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVNECKKEYPEAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|P05346.2|RBS1_BRANA RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|17850|emb|CAA43410.1| ribulose bisphosphate
           carboxylase [Brassica napus]
          Length = 181

 Score =  201 bits (510), Expect = 7e-49
 Identities = 96/175 (54%), Positives = 122/175 (69%), Gaps = 10/175 (5%)
 Frame = -2

Query: 976 LLSSPAMGMSAVVAPAKTSLMRPLELSKAPSSVAKGNKKSASTTK---------AMLVWP 824
           + SS     + V +PA+ +++ P    K+ S+     K +   T           M VWP
Sbjct: 1   MASSMLSSAAVVTSPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWP 60

Query: 823 NKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGR 647
             GK KFETLSYLP LT+ +L KE+DYLLRNKW+PC+EF+ E G + R++G+TPGYYDGR
Sbjct: 61  PVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 120

Query: 646 YWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 482
           YWTMWKLP+FGC DSA VL+E++E K EYP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKP 175


>ref|NP_176880.1| ribulose bisphosphate carboxylase small chain 1A [Arabidopsis
           thaliana] gi|27735223|sp|P10795.2|RBS1A_ARATH RecName:
           Full=Ribulose bisphosphate carboxylase small chain 1A,
           chloroplastic; Short=RuBisCO small subunit 1A; Flags:
           Precursor gi|11762170|gb|AAG40363.1|AF325011_1 000C10C11
           [Arabidopsis thaliana]
           gi|15294200|gb|AAK95277.1|AF410291_1 F1O19.10/F1O19.10
           [Arabidopsis thaliana] gi|4204274|gb|AAD10655.1|
           ribulose bisphosphate carboxylase, small subunit
           [Arabidopsis thaliana] gi|15451002|gb|AAK96772.1|
           ribulose bisphosphate carboxylase, small subunit
           [Arabidopsis thaliana] gi|15809842|gb|AAL06849.1|
           At1g67090/F1O19.10 [Arabidopsis thaliana]
           gi|16604426|gb|AAL24219.1| At1g67090/F1O19.10
           [Arabidopsis thaliana] gi|16649141|gb|AAL24422.1|
           ribulose bisphosphate carboxylase, small subunit
           [Arabidopsis thaliana] gi|17065072|gb|AAL32690.1|
           ribulose bisphosphate carboxylase, small subunit
           [Arabidopsis thaliana] gi|17065270|gb|AAL32789.1|
           ribulose bisphosphate carboxylase, small subunit
           [Arabidopsis thaliana] gi|17473628|gb|AAL38277.1|
           ribulose bisphosphate carboxylase, small subunit
           [Arabidopsis thaliana] gi|20260064|gb|AAM13379.1|
           ribulose bisphosphate carboxylase, small subunit
           [Arabidopsis thaliana] gi|20260080|gb|AAM13387.1|
           ribulose bisphosphate carboxylase, small subunit
           [Arabidopsis thaliana] gi|20453287|gb|AAM19882.1|
           At1g67090/F1O19.10 [Arabidopsis thaliana]
           gi|23198308|gb|AAN15681.1| ribulose bisphosphate
           carboxylase, small subunit [Arabidopsis thaliana]
           gi|25083492|gb|AAN72087.1| ribulose bisphosphate
           carboxylase, small subunit [Arabidopsis thaliana]
           gi|110741032|dbj|BAE98610.1| ribulose bisphosphate
           carboxylase like protein, small subunit [Arabidopsis
           thaliana] gi|110741446|dbj|BAE98685.1| ribulose
           bisphosphate carboxylase like protein, small subunit
           [Arabidopsis thaliana] gi|110741475|dbj|BAE98695.1|
           ribulose bisphosphate carboxylase like protein, small
           subunit [Arabidopsis thaliana]
           gi|110741865|dbj|BAE98874.1| ribulose bisphosphate
           carboxylase like protein, small subunit [Arabidopsis
           thaliana] gi|332196473|gb|AEE34594.1| ribulose
           bisphosphate carboxylase small chain 1A [Arabidopsis
           thaliana]
          Length = 180

 Score =  200 bits (509), Expect = 9e-49
 Identities = 98/175 (56%), Positives = 123/175 (70%), Gaps = 10/175 (5%)
 Frame = -2

Query: 976 LLSSPAMGMSAVVAPAKTSLMRP---LELSKAPSSVAKGNKKSASTTK------AMLVWP 824
           + SS     + V +PA+ +++ P   L+ S A  +  K N    S T        M VWP
Sbjct: 1   MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60

Query: 823 NKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGR 647
             GK KFETLSYLP LT  +L+KE+DYL+RNKW+PC+EF+ E G + R++G +PGYYDGR
Sbjct: 61  PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGR 120

Query: 646 YWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 482
           YWTMWKLP+FGC DSA VL+E+EE KKEYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175


>ref|NP_198659.1| ribulose bisphosphate carboxylase small chain 1B [Arabidopsis
           thaliana] gi|132090|sp|P10796.1|RBS1B_ARATH RecName:
           Full=Ribulose bisphosphate carboxylase small chain 1B,
           chloroplastic; Short=RuBisCO small subunit 1B; Flags:
           Precursor gi|15294184|gb|AAK95269.1|AF410283_1
           F1O19.10/F1O19.10 [Arabidopsis thaliana]
           gi|16193|emb|CAA32700.1| ribulose bisphosphate
           carboxylase [Arabidopsis thaliana]
           gi|9758821|dbj|BAB09355.1| ribulose bisphosphate
           carboxylase small chain 1b precursor (RuBisCO small
           subunit 1b) [Arabidopsis thaliana]
           gi|23505787|gb|AAN28753.1| At5g38430/F1O19.10
           [Arabidopsis thaliana] gi|332006932|gb|AED94315.1|
           ribulose bisphosphate carboxylase small chain 1B
           [Arabidopsis thaliana]
          Length = 181

 Score =  200 bits (509), Expect = 9e-49
 Identities = 99/175 (56%), Positives = 122/175 (69%), Gaps = 10/175 (5%)
 Frame = -2

Query: 976 LLSSPAMGMSAVVAPAKTSLMRPLELSKAPSS---VAKGNKKSASTTK------AMLVWP 824
           + SS     + V +PA+ +++ P    K+ +S     K N    S T        M VWP
Sbjct: 1   MASSMLSSAAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWP 60

Query: 823 NKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGR 647
             GK KFETLSYLP LT  +L+KE+DYLLRNKW+PC+EF+ E G + R++G TPGYYDGR
Sbjct: 61  PIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120

Query: 646 YWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 482
           YWTMWKLP+FGC DSA VL+E+EE KKEYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175


>emb|CAA30290.1| rubisco ssu precursor [Brassica napus]
          Length = 181

 Score =  200 bits (509), Expect = 9e-49
 Identities = 98/175 (56%), Positives = 125/175 (71%), Gaps = 10/175 (5%)
 Frame = -2

Query: 976 LLSSPAMGMSAVVAPAKTSLMRPLELSKAPSSVAKGNKKSASTTK---------AMLVWP 824
           +LSS A+    V +PA+ +++ P    K+ S+     K +   T          +M VWP
Sbjct: 5   MLSSAAV----VTSPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVNSMQVWP 60

Query: 823 NKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGR 647
             GK KFETLSYLP LT+ +L KE+DYLLRNKW+PC+EF+ E G + R++G+TPGYYDGR
Sbjct: 61  PVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 120

Query: 646 YWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 482
           YWTMWKLP+FGC DSA VL+E++E K EYP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKP 175


>ref|XP_002868776.1| ribulose bisphosphate carboxylase [Arabidopsis lyrata subsp.
           lyrata] gi|297314612|gb|EFH45035.1| ribulose
           bisphosphate carboxylase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 181

 Score =  200 bits (509), Expect = 9e-49
 Identities = 96/175 (54%), Positives = 122/175 (69%), Gaps = 10/175 (5%)
 Frame = -2

Query: 976 LLSSPAMGMSAVVAPAKTSLMRPLELSKAPSSVAKGNKKSASTTK---------AMLVWP 824
           + SS     + V +PA+ +++ P    K+ ++     K +   T           M VWP
Sbjct: 1   MASSMLSSAAVVTSPAQATMVAPFSGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 60

Query: 823 NKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGR 647
             GK KFETLSYLP LT  +L+KE+DYLLRNKW+PC+EF+ E G + R++G TPGYYDGR
Sbjct: 61  PIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120

Query: 646 YWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 482
           YWTMWKLP+FGC DSA VL+E++E KKEYP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 175


>emb|CAA32702.1| ribulose bisphosphate carboxylase [Arabidopsis thaliana]
          Length = 181

 Score =  200 bits (508), Expect = 1e-48
 Identities = 100/175 (57%), Positives = 123/175 (70%), Gaps = 10/175 (5%)
 Frame = -2

Query: 976 LLSSPAMGMSAVVAPAKTSLMRP---LELSKAPSSVAKGNKKSASTTK------AMLVWP 824
           + SS     + V +PA+ +++ P   L+ S A     K NK   S T        M VWP
Sbjct: 1   MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSITSNGGRVSCMKVWP 60

Query: 823 NKGKIKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGR 647
             GK KFETLSYLP L+  +L+KE+DYLLRNKW+PC+EF+ E G + R++G TPGYYDGR
Sbjct: 61  PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120

Query: 646 YWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 482
           YWTMWKLP+FGC DSA VL+E+EE KKEYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175